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Publications de l'Institut de chimie | UMR 7177

  • Article dans une revue
  • Synthesis, characterization, and anticancer activity of acylthiourea-ruthenium(II) p-cymene complexes

    Raúl Ramos, Ana María Plutín, Raúl Oscar Mocelo, Jean-Pierre Djukic, Camila Batista Pinto, Eduardo Castellano, Gustavo Echeverría, Oscar Piro, Mauricio Erben, Legna Colina-Vegas, Beatriz Cunha, Alzir Batista
    Journal of Inorganic Biochemistry, 2026, 276, pp.113180. ⟨10.1016/j.jinorgbio.2025.113180⟩ | Publiée le 1 janvier 2026
    Article dans une revue

    In this work, we report the synthesis and characterization of three novel ruthenium(II) p-cymene complexes coordinated with acylthiourea ligands (L1−L3), of general formula [Ru(η6-p-cymene)(PPh3)(L1–L3)Cl]PF6 (1–3). Single-crystal X-ray crystallography of the free ligands and their complexes [Ru(η6-p-cymene)(PPh3) (κ1-S)-(N-benzoyl-N´-cyclopropylthiourea)Cl]PF6 (1), Ru(η6-p-cymene)(PPh3) (κ1-S)-(N-2-furoyl-N´-cyclopropylthiourea)Cl]PF6 (2), [Ru(η6-p-cymene)(PPh3)] (κ1-S)-(N-thiophene-2-carbonyl-N´-cyclopropyl thiourea)Cl]PF6 (3) revealed that the acylthiourea ligands act as neutral monodentate donors, coordinating through the sulfur atom (κ1-S). Application of the Extended Transition State–Natural Orbitals for Chemical Valence method demonstrated that the dominant interaction in complexes 1–3 originates from the overlap between the sulfur lone pair of the ligands and a Ru d-orbital, which plays a decisive role in their stability. The Interacting Quantum Atom analysis showed that both the free and coordinated acylthiourea ligands stabilize their structure through an intramolecular N–H···O=C hydrogen bond. The cytotoxicity of complexes 1–3 was evaluated against the A549 (lung) and MDA-MB-231 (breast) human cancer cell lines. To assess their selectivity, the compounds were also tested against two non-cancerous cell models: MRC-5 (lung fibroblasts) and MCF-10 A (breast epithelial cells). The study revealed high cytotoxicity against the MDA-MB-231 cell line, with IC₅₀ values of 0.62 ± 0.05 μM (1), 0.66 ± 0.12 μM (2), and 0.53 ± 0.12 μM (3). Activity against the A549 cell line was also significant, with IC₅₀ values of 1.05 ± 0.11 μM (1), 2.60 ± 0.25 μM (2), and 1.04 ± 0.21 μM (3). The combination of phosphine and acylthiourea ligands appears critical for achieving high cytotoxic activity.

  • Chalcogen bonding in complexes based on electrophilic tellurium

    Andres Padilla Hernandez, Victor Mamane
    Coordination Chemistry Reviews, 2026, 551, pp.217416. ⟨10.1016/j.ccr.2025.217416⟩ | Publiée le 1 janvier 2026
    Article dans une revue

    Chalcogen bonding (ChB), defined as the non-covalent interaction between an electrophilic chalcogen atom and a Lewis base, is now recognized as a powerful tool across a wide range of chemical applications. The strength of the ChB depends on the nature of the chalcogen atom; consequently, tellurium species exhibit the strongest ChB, compared to their sulfur and selenium analogues. This review aims at providing the readers with an overview of systems involving electrophilic tellurium atoms engaged in ChBs with Lewis bases, both in the solid state and in solution. In early studies-predating the widespread adoption of the σ-hole concept-the presence of ChBs was proposed on the basis of the geometrical parameters obtained from the X-ray single crystal structures. Specifically, interatomic distances below the sum of van der Waals radii and the near-linearity of the interactions were considered key indicators of ChB formation. This review is organized in sections highlighting the ability of tellurium to participate in ChBs at different oxidation states (0, +1, +2, +4 and + 6). Beyond structural analysis and characterization, the aim of this review is to underscore the different roles of ChB, ranging from the stabilization of reactive or unstable species to their involvement in catalytic processes and crystal engineering.

  • Biophysical investigations of the membrane interactions of collagen VI-derived host defense peptides

    Kathakali De, Karin Bryder, Christopher Aisenbrey, Matthias Mörgelin, Burkhard Bechinger
    Biochimica et Biophysica Acta:Biomembranes, 2025, 1867 (8), pp.184448. ⟨10.1016/j.bbamem.2025.184448⟩ | Publiée le 1 décembre 2025
    Article dans une revue

    Collagen VI is an extracellular matrix protein forming complex microfibrillar networks in connective tissues. Specifically, we focused on its role in innate immunity, in particular on cationic sequence motifs from the α3(VI)-chain, which exhibit strong antibacterial properties against both Gram-positive and Gram-negative bacteria in vitro and in vivo. Cytotoxicity assays revealed minimal to no adverse effects, even at concentrations effective against bacterial pathogens. This favorable safety profile suggest that these antimicrobial peptides selectively target bacterial membranes while sparing host cells, making them promising candidates for therapeutic development. The membrane structure and interactions of two antimicrobial peptides were investigated in quantitative detail using solid-state NMR, CD and fluorescence spectroscopies. Whereas calcein release was somewhat more pronounced from POPE/POPG 3/1 vesicles when compared to POPC/30% cholesterol, this activity is about two orders of magnitude increased when POPC/POPG 3/1 liposomes are investigated. This pronounced lipid dependence was reproduced with magainin 2, a well-known linear cationic AMP. In lipid titration experiments both collagen-derived peptides showed a transition from predominantly random coil to helical conformations. Quantitative evaluation of membrane association required the presence of PEGlipids which are known to prevent the agglutination of POPE/POPG 3/1 liposomes. A dissociation constant in the 260 µM range was observed for GVR28 while the binding isotherms reveal an intermediate state when SFV33 associates with bacterial membranes. 2 H solid-state NMR reveals considerable membrane disorder of the deuterated PG palmitoyl chain in POPE/POPG membranes. The ensemble of biophysical data suggest two distinct modes of action for the collagen derived peptides.

  • Supramolecular Assemblies Involving Triaryltelluronium Cations: Combining Chalcogen Bonding, Hydrogen Bonding and Lone Pair-pi Interactions

    Loic Groslambert, Andres Padilla-Hernandez, Avantika Hasija, Emmanuel Aubert, Patrick Pale, Victor Mamane
    CrystEngComm, 2025, ⟨10.1039/D5CE00866B⟩ | Publiée le 25 novembre 2025
    Article dans une revue

    In this manuscript, we report the synthesis and X-ray characterization of a series of solvates and co-crystals involving triaryltelluronium salts and various Lewis bases. In some cases, the triaryltelluronium cation is able to interact with acceptor atoms simultaneously through its three sigma-holes and through a “pocket” formed by the three electron-deficient aromatic rings linked to tellurium. The latter interaction involves an acceptor atom that shows close contacts with both the ortho-hydrogens of two aromatic rings and the electron-deficient pi-system of the third ring. Interestingly, the co-crystal formed between the triaryltelluronium cation and ditopic nitrile ligands provides three-dimentional supramolecular networks that combine Te•••N chalcogen bonds, CAr-H•••N hydrogen bonds and N lone pair•••pi interactions

  • Bright Circularly Polarized Electrochemiluminescence from Heterobinuclear Ir III –Au I Enantiomers

    Lavinia Ballerini, Miaoxia Liu, Lorenzo Arrico, Silvia Voci, Christophe Gourlaouen, Chantal Daniel, Vincent César, Stéphane Bellemin-Laponnaz, Francesco Zinna, Laurent Bouffier, Federico Polo, Lorenzo Di Bari, Neso Sojic, Matteo Mauro
    Angewandte Chemie International Edition, 2025, Online ahead of print. ⟨10.1002/anie.202510787⟩ | Publiée le 13 novembre 2025
    Article dans une revue

    Abstract The development of efficient circularly polarized electrochemiluminescence (CP‐ECL) probes is still at its infancy and examples are still very limited. Yet, their achievement would enable gathering a readout that carries privileged information on the probe's chiral environment by monitoring luminescence polarization bias with high signal‐to‐noise ratio. Notwithstanding, this is a highly challenging task and requires judicious chemical engineering of chiral ECL‐active emitters. Herein, we aim at expanding the palette of CP‐ECL luminophores by presenting a novel class of enantiopure heterobinuclear Ir(III)–Au(I) complexes, which are investigated thoroughly by means of chemical, structural, and (chiro‐)optical techniques. The ground and excited state properties are also elucidated by using density functional theory (DFT) approaches including spin‐orbital coupling (SOC) perturbation. The chiral‐at‐metal complexes display luminescence with a polarization bias of the emitted light that is function of the helical arrangement of the coordination sphere around the Ir(III) center. Overall, the photo‐ and electro‐active complexes unraveled in this work combine unparallelly high photoluminescence quantum yield in the orange region, excellent circularly polarized luminescence (CPL) brightness up to 4.5 M −1 cm −1 with a notable ECL activity. Finally, these features provide emitters with CP‐ECL efficiency that encompass remarkably by a factor 3.5 that of the well‐known benchmark tris ‐(2,2′‐bipyridyl)ruthenium(II).

  • Effect of ligand denticity on the removal of 238 Pu from dilute aqueous solutions by hydroxamate-based chelating gels

    Laurie Zujew, Osian Fonquernie, Floriane Mangin, Stéphane Brandès, Josselin Gorny, Michel Meyer, Jean-Claude Chambron, Laureline Février
    New Journal of Chemistry, 2025, 49, pp.20151-20160. ⟨10.1039/d5nj02515j⟩ | Publiée le 11 novembre 2025
    Article dans une revue

    Plutonium (Pu) is a chemically and radiologically toxic element, primarily of anthropogenic origin. Reagents that specifically sequester Pu have been developed in the frame of nuclear waste processing and storage. Other potential applications of Pu chelators are in vivo decorporation and environmental remediation. Although the medical application has been addressed for a long time by the development of Pu-specific binders, studies concerning the environmental application are scarce. A desferrioxamine-B ([(DFO)H4]+)-derived tetrahydroxamate chelator, 1H4, which was originally designed for the sequestration of Zr4+ for 89Zr-ImmunoPET applications, was grafted on a commercial hydrophilic resin, CM Sephadex C-25®. The resin beads were subsequently embedded in an agarose gel, and the resulting material was used for the extraction of 238Pu(IV) from dilute aqueous solutions at pH 6.5. Comparison of the results with those obtained using the commercial Chelex®-100 resin and the H3DFO-based CM Sephadex C-25® extracting materials showed that Pu was more strongly bound to the 1H4-functionalized resin than to Chelex®-100 and the H3DFO-based resins, which confirms that the tetrahydroxamate chelator 14− forms a more stable Pu(IV) complex than the trihydroxamate DFO3− siderophore. The fabricated material could be considered in the development of diffusive gradients in thin-films (DGT) devices for the environmental monitoring of Pu.

  • Unravelling dispersion forces in liquid-phase enantioseparation. Part III: Interplay between dispersion, repulsion, and hydrophobic forces in the enantioseparation of planar chiral 3-substituted-1-iodoethynylferrocenes

    Barbara Sechi, Alessandro Dessì, Roberto Dallocchio, Saba Jorbenadze, Natia Tchanturia, Bezhan Chankvetadze, Sergio Cossu, Iza Matarashvili, Victor Mamane, Paola Peluso
    Analytica Chimica Acta, 2025, 1382, pp.344853. ⟨10.1016/j.aca.2025.344853⟩ | Publiée le 1 novembre 2025
    Article dans une revue

    Background -The detection of dispersion forces in enantioselective liquid chromatography (LC) is rather challenging because selectand, selector and mobile phase molecules may participate in multiple types of intra-and intermolecular noncovalent interactions of different strength. In this frame, the LC system can be used as a tool to evaluate the impact of changing the structures of selectand, chiral selector and separation medium, through fast analytical screenings. In the last few years, we studied the enantioseparations of chiral compounds containing the ethynylferrocene moiety as a test probe to identify dispersion forces in LC by using amylose carbamate-based CSPs.</p><p>Results -The results of the study have been reported in a series of three papers. In Part II, we confirmed that the high affinity observed for the second eluted (Rp)-enantiomer of the 1-(iodoethynyl)-3phenylferrocene toward amylose phenylcarbamate-based selectors could be reasonably based on dispersion forces. In the present Part III of the series, we focus on the impact of changing the 3-aryl substituent of 1-(iodoethynyl)-3-arylferrocenes on the enantioseparation, considering the 1-(iodoethynyl)-3-phenylferrocene as reference for comparison. On this basis, the enantioseparations of seven planar chiral ferrocenes were performed and compared by using amylose-based CSPs. n-Hexane-based mixtures, polar organic solvents and aqueous organic mixtures were used with the aim of evaluate the impact of mobile phases of different polarity on the enantioseparations. The results of the chromatographic analyses confirmed the high and unique affinity of the second eluted (Rp)-enantiomer of the 1-(iodoethynyl)-3-(4t-butyl)phenylferrocene toward the amylose-based CSPs.</p><p>Significance -By using 1-(iodoethynyl)-3-arylferrocenes as test probes, this study confirmed that dispersion forces may turn steric repulsion into attraction with a strength depending on the structure of the 3-aryl group and on mobile phase polarizability. Furthermore, the possibility to deconvolute hydrophobic and dispersion forces in aqueous mobile phases was also demonstrated.

  • Porphyrin and triphenylamine cores linked by a phenyl-azomethine bridge: Synthesis and characterization

    Ibrahima Paka Manga, Mamadou Lo, Adji Fatou Fall Pouye, Christophe Gourlaouen, Henri‐pierre Jacquot de Rouville, Abdoulaye Gassama, Jean Weiss
    Journal of Porphyrins and Phthalocyanines, 2025, 30, pp.A-I. ⟨10.1142/S1088424625500932⟩ | Publiée le 30 octobre 2025
    Article dans une revue

    Three meso-substituted Schiff base porphyrin derivatives were designed and synthesized by condensing the amine group of 5-(4-aminophenyl)-10,15,20-triphenylporphyrin (APTPP) with 4-formyltriphenylamine (2), 4,4′-diformyltriphenylamine (3), and 4,4′,4″-triformylphenylamine (4). These molecules were developed for their potential interest in optoelectronic applications. The resulting compounds were thoroughly characterized using 1 H and [Formula: see text]C NMR, UV-vis spectroscopy, mass spectrometry, fluorescence, and cyclic voltammetry. Theoretical calculations were performed using DFT. The electrochemical properties were studied by cyclic voltammetry (CV).

  • Expanding heterocyclic chemical space through the reactivity of N-allenamides

    Dorian Schutz, Laurence Miesch
    Comptes Rendus. Chimie, 2025, 28, pp.789 - 804. ⟨10.5802/crchim.414⟩ | Publiée le 24 octobre 2025
    Article dans une revue

    Over the last few decades, allenes have evolved from objects of curiosity to central elements of organic synthesis. Among them, N-allenamides, allenes featuring an electron-withdrawing group on the nitrogen, stand out for their great stability and versatility. Their unique reactivity has made them valuable platforms for numerous chemical transformations. Their interest is reinforced by their ability to efficiently lead to multisubstituted enamides, motifs present in many bioactive natural products but notoriously challenging to synthesize with high regio-and stereocontrol. Driven by our deep interest in the reactivity of activated N-allenamides, particularly those with fluorinated units, we present here new transformations leading to the construction of heterocyclic fluorinated structures and complex enamides, two motifs with significant relevance in medicinal chemistry.

  • Substitution of CH 3 by CH 2 F in 2‐Methylerythritol Cyclodiphosphate Triggers Potent Inhibition of IspG with Concomitant Fluoride Ion Expulsion

    Clea Witjaksono, Vivien Herrscher, Hannah Jobelius, Nathan Noël, Fabien Massicot, Jean‐luc Vasse, Jean‐bernard Behr, Myriam Seemann
    Chemistry - A European Journal, 2025, ⟨10.1002/chem.202502471⟩ | Publiée le 22 octobre 2025
    Article dans une revue

    Abstract IspG (also known as GcpE) is a key [4Fe‐4S] metalloenzyme that catalyzes the penultimate step of the methylerythritol phosphate (MEP) pathway, a well‐established target for the development of new antimicrobials. This oxygen‐sensitive enzyme mediates the reductive dehydroxylation of 2‐ C ‐methyl‐ d ‐erythritol 2,4‐cyclodiphosphate (MEcPP) to ( E )‐4‐hydroxy‐3‐methylbut‐2‐en‐1‐yl diphosphate (HMBPP), requiring electron transfer proteins to deliver two electrons needed for catalysis. To probe the mechanism of IspG and access new mechanism‐based inhibitors, we synthesized a substrate analogue, monofluoromethyl‐ d ‐erythritol cyclodiphosphate, in which the natural methyl group of MEcPP is replaced by a CH 2 F group. This analogue proved to be a potent inhibitor of IspG. This study also demonstrates that electron capture is a prerequisite for inhibition and that the inhibitor leads to fluoride release in the IspG‐catalyzed reaction. Together, these results provide further support for the involvement of a carbanionic intermediate in the IspG mechanism.

  • A Stable Radical in Cationic Dinuclear Rare Earth Triple-Decker Complexes Featuring Switchable Magnetic Properties

    Joe Komeda, Sören Schlittenhardt, Asato Mizuno, Eufemio Moreno-Pineda, Yaorong Chen, Olaf Fuhr, Jordan Appleton, Athanassios Boudalis, Svetlana Klyatskaya, Mario Ruben
    Journal of the American Chemical Society, 2025, 147 (43), pp.39367-39378. ⟨10.1021/jacs.5c11362⟩ | Publiée le 20 octobre 2025
    Article dans une revue

    In quantum information processing, qudits-quantum systems with d levels-have been a major challenge for their potential to accelerate certain computational tasks. Spin transport measurements on tris(phthalocyaninato)-dinuclear rare-earth(III) molecules offer a promising platform for nuclear spin qudits with increased Hilbert space. However, the absence of radicals in these systems has hindered studies on the coupling between lanthanide ions and conduction electrons.</p><p>In this study, we report the synthesis of (phthalocyaninato)bis(porphyrinato)-dinuclear rare-earth(III) complexes functionalized with thiomethyl groups. The tailored oxidation levels in the neutral complexes facilitated the conversion to air-stable radicals. CASSCF calculations and static magnetic measurements revealed a radical-lanthanide exchange coupling constant, J Rad-Ln = -0.45 cm -1 . Dynamic magnetic measurements demonstrated a shift in the magnetic properties due to exchange interaction, namely from field-induced single-molecule magnets (SMM) to zero-field SMM. The findings of this study, along with the potential of the strong bond between thiomethyl group and gold electrode, highlight the potential of these molecules as novel materials for the implementation of nuclear spin qubits with an increased Hilbert space.

  • Local Potential Functional Embedding Theory of Molecular Systems: Localized Orbital-Based Embedding from an Exact Density-Functional Perspective

    Wafa Makhlouf, Bruno Senjean, Emmanuel Fromager
    Journal of Chemical Theory and Computation, 2025, 21 (20), pp.10293-10314. ⟨10.1021/acs.jctc.5c01256⟩ | Publiée le 17 octobre 2025
    Article dans une revue

    Quantum computing has recently been emerging in theoretical chemistry as a realistic avenue meant to offer computational speedup to challenging eigenproblems in the context of strongly-correlated molecular systems or extended materials. Most studies so far have been devoted to the quantum treatment of electronic structure and only a few were directed to the quantum treatment of vibrational structure, which at the moment remains not devoid of unknowns. In particular, we address here a formal problem that arises when simulating a vibrational model under harmonic second quantization, whereby the disruption of the closure relation (resolution of the identity) -- which occurs when truncating the infinite bosonic basis set -- may have some serious effects as regards the correct evaluation of Hamiltonian matrix elements. This relates intimately to the normal ordering of products of ladder operators. In addition, we discuss the relevance of choosing an adequate primitive basis set within the present context with respect to its variational convergence properties. Such fundamental, yet consequential, aspects are illustrated numerically in the present work on a one-dimensional anharmonic Hamiltonian model corresponding to a double-well potential showing strong tunneling, of interest both for vibrational spectroscopy and chemical reactivity.

  • Lanthanide complexes bearing a bioinspired Cu II binding site with picomolar affinity: synthesis, structural, relaxometric and luminescence studies

    Katharina Zimmeter, Bertrand Vileno, Agnès Pallier, Carlos Platas-Iglesias, Peter Faller, Celia ́ Bonnet, Angélique Sour
    Dalton Transactions, 2025, 54 (41), pp.15432-15440. ⟨10.1039/d5dt01735a⟩ | Publiée le 29 septembre 2025
    Article dans une revue

    In the pursuit of CuII-responsive MRI contrast agents with enhanced CuII affinity, we report the synthesis and characterization of two LnIII-DO3A-C3AmpicGH complexes (LnIII = GdIII, EuIII), featuring a tetradentate CuII-binding moiety, along with the corresponding mononuclear CuII-C3AmpicGH complex. The chelator coordinates CuII through two amide groups, a pyridine and an imidazole ring. The use of a propyl-amide linker between the LnIII- and CuII-binding moieties allowed an increased separation between the two metal centers. As a result, both LnIII–CuII-DO3A-C3AmpicGH and CuII-C3AmpicGH complexes exhibit the same CuII-affinity (log K = 11–12 at pH 7.4) and good selectivity over competing physiological metal ions, particularly ZnII (up to at least 500 equivalents). While the GdIII complex displayed no relaxivity changes upon CuII binding, the EuIII analogue showed a luminescence turn-off response. Spectroscopic analyses as well as density functional theory (DFT) calculations provide insights into the coordination environments of both metal ions, notably confirming the absence of amide coordination to the LnIII center, even in absence of CuII.

  • Silver(I)-NHC Complexes as Dual-Action Agents Against Pathogenic Acanthamoeba Trophozoites: Anti-Amoebic and Anti-Adhesion Activities

    Shaima Hkiri, Neslihan Şahin, Zübeyda Akın-Polat, Elvan Üstün, Bui Minh Thu Ly, İsmail Özdemir, David Sémeril
    International Journal of Molecular Sciences, 2025, 26 (19), pp.9393. ⟨10.3390/ijms26199393⟩ | Publiée le 25 septembre 2025
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    A series of six silver(I) complexes, namely bromo(1-benzyl-3-cinnamyl-benzimidazol-2-ylidene)silver (I) (1a), bromo[1-(4-methylbenzyl)-3-cinnamyl-benzimidazol-2-yliden]silver(I) (1b), bromo[1-(3-methoxylbenzyl)-3-cinnamyl-benzimidazol-2-yliden]silver(I) (1c), bromo[1-(3,5-dimethoxy-benzyl)-3-cinnamyl-benzimidazol-2-ylidene]silver(I) (1d), bromo[1-(naphthalen-1-ylmethyl)-3-cinnamyl-benzimidazol-2-ylidene]silver(I) (1e) and bromo[1-(pyren-1-ylmethyl)-3-cinnamyl-benzimidazol-2-yliden]silver(I) (1f), were synthetized and characterized by microanalyses and mass spectrometry and characterized by FT-IR and NMR spectroscopic techniques. The in vitro effects of silver(I) complexes on trophozoites of two Acanthamoeba isolates obtained from patients with keratitis were investigated. The parasites were exposed to concentrations of 10, 100 and 1000 µM for 24, 48 and 72 h. The complexes exhibited potent, dose- and time-dependent activity. Complete inhibition was observed within 24 h at a concentration of 1000 µM. At a concentration of 100 µM, complexes 1c–e exhibited reduced viability to less than 10% within 48 to 72 h. At a concentration of 10 µM, partial inhibition was observed. Preliminary morphological changes included the loss of acanthopodia, rounding, and detachment. These effects were not observed in the presence of the pre-ligands or commercially available silver compounds. Furthermore, molecular docking was utilized to analyze the molecules against Acanthamoeba castellanii CYP51, A. castellanii profilin IA, IB, and II. The highest recorded interactions were identified as −9.85 and −11.26 kcal/mol for 1e and 1f, respectively, when evaluated against the A. castellanii CYP51 structure.

  • Defect-mediated pairing and dissociation of strongly correlated electrons in low-dimensional lattices

    Vincent Pouthier, Saad Yalouz
    Physical Review B, 2025, 112 (12), pp.125158. ⟨10.1103/467x-8f21⟩ | Publiée le 25 septembre 2025
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    <div><p>We study the quantum dynamics of a strongly correlated electron pair in a one-dimensional lattice, focusing on the occurrence of local dissociation/pairing mechanisms induced by a site energy defect. To this end, we simulate the time evolution of two interacting electrons on a finite-size chain governed by an extended Hubbard Hamiltonian including on-site Coulomb repulsion U and nearest-neighbor interaction V , along with single-electron hopping J. By introducing a local site energy defect with amplitude ∆, we show that a transition between spatially paired/dissociated electrons can occur in the vicinity of this site. Such mechanisms arise in a strongly correlated regime with non-zero nearest neighbor Coulomb interactions and under the conditions (U ∼ V ∼ ∆) ≫ J. To rationalize these phenomena, we reformulate the two-electron dynamics of the original Hubbard chain as an effective single-particle problem on a two-dimensional network. Within this framework, we show that the pairing/dissociation dynamics are driven by resonances between two distinct families of two-electron eigenstates: (i) states with two spatially well-separated electrons with one located at the site defect, and (ii) states with locally bound electron located away from the defect. At resonance, these states hybridize, allowing transitions from locally paired to dissociated electrons (and vice versa) in the vicinity of the defect. These results provide new insights into exotic pairing phenomena in strongly correlated electronic systems and may have implications for the design of tunable many-body states in low-dimensional quantum materials.</p></div>

  • Path Selective Photoinduced Energy and Electron Transfer in a Bis(acridinium‐Zn(II) Porphyrin)‐tetrapyridyl Porphyrin Host‐Guest Complex

    Federica Ruani, Daniele Veclani, Daniel Sanchez‐resa, Amy Edo‐osagie, Geordie V Creste, Andrea Barbieri, Valérie Heitz, Henri‐pierre Jacquot de Rouville, Nicola Armaroli, Barbara Ventura
    Chemistry - A European Journal, 2025, 202502604, ⟨10.1002/chem.202502604⟩ | Publiée le 19 septembre 2025
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    The 1:1 complex of a bis(acridinium‐Zn(II)porphyrin) host and a tetrapyridyl free‐base porphyrin guest shows a remarkable interplay of energy and electron transfer (eT) processes, finely tuned by the solvent polarity or the selection of the photoexcited component. A more polar environment (CH 2 Cl 2 ) favors uncommon parallel intramolecular and intermolecular eT processes, while in an apolar solvent (toluene) the intermolecular eT process is hampered. Notably, the apolar environment also enables a rare energy transfer process from the porphyrin guest toward the charge‐transfer emissive state of the tweezer host. In total, no less than four different excited states were probed, which can be sketched by an inverted pyramid diagram highlighting directional path selection.

  • A Co-catalytic nanosystem based on molybdenum disulfide and Prussian blue for synergistic chemodynamic and photothermal therapy through mitochondrial damage and ferroptosis

    Yilin He, Chunxu Lv, Nolwenn Le Breton, Haijun Peng, Tengfei Wang, Paolo Samorì, Sylvie Choua, Alberto Bianco, Baojin Ma, Cécilia Ménard-Moyon
    Acta Biomaterialia, 2025, 204, pp.518-533. ⟨10.1016/j.actbio.2025.07.037⟩ | Publiée le 8 septembre 2025
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    Chemodynamic therapy (CDT) is regarded as an emerging strategy with high specificity for tumor therapy by producing highly toxic reactive oxygen species (ROS) in tumor cells by a Fenton or Fenton-like reaction. Excessive ROS can cause mitochondrial damage and induce ferroptosis in cells, leading to the death of cancer cells. However, the generally low efficiency of the Fenton reaction has limited the effectiveness of CDT. Herein, two-dimensional MoS<sub>2</sub> decorated with PB NPs is used as a co-catalyst to promote Fe<sup>III</sup>/Fe<sup>II</sup> conversion and thus enhance the efficiency of the Fenton reaction. The photothermal properties of both MoS<sub>2</sub> and PB NPs further enhance the Fenton reaction, eventually producing a large amount of ROS. Mitochondrial damage and ferroptosis caused by ROS are evidenced in vitro and in a tumor-bearing mouse model and jointly lead to a decrease in heat shock protein content, further enhancing the photothermal effect of PB NP/MoS<sub>2</sub> nanosystem. This chemodynamic/photothermal synergistic therapy allows achieving good anticancer therapeutic effect. Statement of significance: CDT is a promising cancer treatment that selectively generates toxic ROS to eliminate tumor cells. Nevertheless, its efficacy is often limited by the low efficiency of the Fenton reaction. This study presents a nanocomposite composed of MoS₂ nanosheets decorated with PB NPs, which enhances CDT by improving Fe<sup>III</sup>/Fe<sup>II</sup> conversion and increasing ROS production. In addition, the photothermal properties of the material further amplify its therapeutic effects. In cell and animal models, this synergistic approach effectively induces mitochondrial damage and ferroptosis, thereby weakening the defenses of the cancer cells. This work provides a significant advancement in CDT, offering a more potent strategy for cancer therapy.

  • Kumada-Corriu Cross Coupling Reaction Catalyzed by Cobalt Nanoparticles arising from the Reductive Decomposition of a Cobaltacycle

    Masoumeh Behzadi, Mélanie Boucher, Jérôme Robert, Jean-Pierre Djukic
    An-Najah University Journal for Research - A (Natural Sciences), 2025, 39 (3), ⟨10.35552/anujr.a.39.3.2583⟩ | Publiée le 2 septembre 2025
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    <div><p>This study shows that the nanoparticles produced by the reductive decomposition of a cobalt (+III) metallacycle derived from 2-phenylpyridine upon treatment with the highly nucleophilic Na[Et3BH] are capable of promoting the Kumada-Corriu cross coupling of aryl halides with aryl-bromomagnesium compounds (Grignard reagents) in various conditions and in the presence of various stabilizing ligands to afford the non-symmetric organic bisaryl product in reasonable yields. This study provides further proof that incidental Co nanoparticles are endowed with a reasonable capability in homogeneous catalysis, complementing thus a prior report on their capability to promote the hydrosilylation of unsaturated organic substrates such as nitriles. Co nanoparticles were characterized by HRTEM, EDX, EELS, and SAED techniques. TEM analyses revealed that the nanoparticles were uniformly spherical in shape, with a size distribution that is quite narrow; no nanoparticles above 3 nm were observed. EDX analysis displaying a characteristic Co signature at about 7 keV. The magnetic behavior of the nanoparticles studied by SQUID analysis in toluene using a temperature varied from 2 to 300 K, and a low magnetic field (10 -3 T) in ZFC-FC conditions.</p></div>

  • A 19F‐ATCUN Peptide NMR Probe for Selective Cu2+ or Ni2+ Sensing in Complex Biological Media

    Marie-Julie Tilly, Enrico Falcone, Bruno B Kieffer, Yannis‐nicolas François, Peter Faller, Marine Desage‐el Murr, Laurent Raibaut
    Chemistry - A European Journal, 2025, 31 (53), pp.e01784. ⟨10.1002/chem.202501784⟩ | Publiée le 19 août 2025
    Article dans une revue

    <div><p>We report the design and synthesis of ratiometric 19 F-ATCUN (Xxx-Zzz-His) peptide probes for the selective and reversible detection of Ni 2+ and Cu 2+ by 19 F NMR spectroscopy. In contrast to fluorescence-based approaches, 19 F NMR enables backgroundfree detection in biological media, due to the absence of fluorine in native biomolecules. The probes remain stable and functional in complex cell media (DMEM), enabling the detection of Cu 2+ and Ni 2+ by 19 F NMR with a limit of detection (LOD) of 4 μM and quantification (LOQ) of 10 μM, relevant for studying copper-related pathologies.</p></div>

  • Arrested Cooperative Electron Transfer by Stabilization of a Long-Lived Confined Unpaired Electron

    Cheriehan Hessin, Mokhtar Ben Ghanem, Nolwenn Le Breton, Sylvie Choua, Aurélien Moncomble, Laurence Grimaud, Herve Vezin, Marine Desage-El Murr
    JACS Au, 2025, JACS Au, ⟨10.1021/jacsau.5c00484⟩ | Publiée le 16 août 2025
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    Cooperative multielectron transfer is central to electron storage strategies and small-molecule activation and involves a thermodynamically favored second electron transfer occurring after the first electron transfer. This is the trademark of molecular systems with inverted redox potentials, but it is counterintuitive from an energetic point of view, and the nature of the transient intermediates involved has remained elusive. Using a nickel complex with inverted redox potentials, we show that a weakly coordinating anion (WCA), such as BArF4– ([B(C6H3(CF3)2)4]−), can act as a kinetic trap for the second electron to be transferred. Combined electrochemistry, UV–visible spectroscopy, advanced EPR studies, and theoretical calculations support its existence as a stabilized, confined unpaired electron, close to the concept of a solvated electron. This work sheds light on the nature of energized intermediates in cooperative electron transfer and the possibility of influencing that process through counterion effects.

  • Mono‐ IrIII versus heterobimetallic IrIII‐AuI complexes for circularly polarized luminescence

    Lavinia Ballerini, Christophe Gourlaouen, Mathias Delporte-Pébay, Cristina Cebrian Avila, Emilie Voirin, Vincent César, Stéphane Bellemin-Laponnaz, Jeanne Crassous, Chantal Daniel, Matteo Mauro
    Chemistry - A European Journal, 2025, 31 (44), pp.e202501611. ⟨10.1002/chem.202501611⟩ | Publiée le 7 août 2025
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    Fundamental rationalization of the structural–circularly polarized luminescence (CPL) activity relationship is a challenging task. Herein, a pair of enantiopure, heterobimetallic IrIII–AuI complexes IrAu‐4 featuring chirality‐at‐metal is thoroughly investigated by means of spectroscopical and computational techniques, also including spin‐orbital coupling (SOC) effects. Upon resolution of the racemic mixture of the starting chloro‐bridged dimer via a chiral auxiliary ligand, the complexes IrIII–AuI are straightforwardly prepared in a stepwise procedure with retention of configuration in good yields. The IrAu‐4 complexes display moderate orange phosphorescence arising from an admixed metal‐to‐ligand and ligand‐to‐ligand charge transfer (3MLCT/3LLCT) excited state and good chiroptical activity, as shown by both electronic circular dichroism (ECD) and CPL spectroscopy. A comparison between the parental mononuclear pairs Δ‐Ir(ppy)2(acac) and Λ‐Ir(ppy)2(acac) and the binuclear IrAu‐4 counterparts also provides interesting insights. The latter possess higher dissymmetry factor (glum) values despite the very similar ECD activity of the lower‐lying 1MLCT band with enantiospecific polarization bias of the light dictated by the chiral‐at‐metal configuration. The different nature of the emissive excited state between the two families of complexes and its implication onto the radiative rate constant and the dipolar force is tentatively accounted for the increased CPL‐activity observed in IrAu‐4.

  • A quantum mechanical evaluation of the intermediate scattering function

    Oussama Bindech, Fabien Gatti, Souvik Mandal, Roberto Marquardt, Jean Christophe Tremblay
    Molecular Physics, 2025, pp.e2541793. ⟨10.1080/00268976.2025.2541793⟩ | Publiée le 5 août 2025
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    The intermediate scattering function is interpreted as a correlation function of thermal wave packets of the scattering centers perturbed by the scattering particles at different times. A proof of concept is given at the example of ballistic moving centers. The ensuing numerical method is then illustrated at the example of CO adsorbed on Cu(100).

  • A simple formulation of dynamic magic-angle spinning NMR derived from relaxation and Floquet theories

    Jérôme Hirschinger
    Solid State Nuclear Magnetic Resonance, 2025, 138, pp.102017. ⟨10.1016/j.ssnmr.2025.102017⟩ | Publiée le 1 août 2025
    Article dans une revue

    A simple method proposed in an insightful paper by A. J. Vega [J. Magn. Reson. 65 (1985) 252-267] is applied for calculating the effects of chemical exchange on magic-angle spinning (MAS) NMR spectra in the case of a two-site rotational jump motion. This approach which only requires two basic expressions of T2 for the limiting cases of fast and slow exchange is compared with exact numerical calculations for arbitrary rates of motion and spinning frequencies. This comparison justifies the application of relaxation theory (RT) to calculate fast-exchange lineshapes but the slow-exchange T2 time constant originally derived by A. Schmidt and S. Vega [J. Chem. Phys. 87 (1987) 6895-6907] using Floquet-perturbation theory (FPT) fails to account for the differences in the spinning sideband linewidths. In this paper, the complete FPT (cFPT) expression of the MAS spectrum is shown to account for all details of differential sideband broadening observed in the slow-exchange regime. Moreover, the RT and cFPT solutions give insight into the effects of molecular dynamics on the MAS spectra and decrease dramatically the computation time. The calculation procedure using the RT and cFPT formulas yield lineshape simulations that are in very good agreement with exact numerical results except in the intermediate-exchange regime when the sideband linewidths become comparable with or larger than the MAS rate. This is a minor drawback in practice as fast relaxation then makes quantitative measurements difficult.

  • Homo- Versus Hetero- [2+2+2] Rhodium-Catalyzed Cycloaddition: Effect of a Self-Assembled Capsule on the Catalytic Outcome

    Maxime Steinmetz, David Sémeril
    Molecules, 2025, 30, ⟨10.3390/molecules30143052⟩ | Publiée le 21 juillet 2025
    Article dans une revue

    The cationic chloro-P-{[4-(diphenylphosphanyl)phenyl]-N,N-dimethylmethanammonio (norbornadiene)rhodium(I) complex was encapsulated inside a self-assembled hexameric capsule. This capsule was obtained through a reaction involving 2,8,14,20-tetra-undecylresorcin[4]arene and water in chloroform. The formation of an inclusion complex was deduced from a combination of spectral measurements (UV-visible spectroscopy, 1 H, 31 P{ 1 H} NMR and DOSY). The rhodium complex was evaluated in the [2+2+2] cycloaddition between N,N-dipropargyl-p-toluenesulfonamide and arylacetylene derivatives. In the presence of two equivalents of arylacetylenes in water-saturated chloroform at 60 • C for 24 h, the 4-methyl-N-(prop-2-yn-1-yl)-N-((2-tosylisoindolin-5-yl)methyl)benzenesulfonamide, the homocycloaddition product of 1,6-diyne is predominantly formed. In the presence of the supramolecular capsule, a selectivity inversion in favor of 5-aryl-2-tosylisoindoline is observed, with heterocycloaddition products formed in proportions between 53 and 69%.

  • Ca 2+ Stabilized by Carborate Anions: Synthesis, Structure, and Reactivity

    Sandip Munshi, Geetika Gupta, Christophe Gourlaouen, Samuel Dagorne, Rudolf J Wehmschulte
    Chemistry - A European Journal, 2025, 31 (41), ⟨10.1002/chem.202501763⟩ | Publiée le 7 juillet 2025
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    Abstract The syntheses of calcium carborates, Ca[HexCB 11 Cl 11 ] 2 , 1 , Ca[HCB 11 Cl 11 ] 2 , 2 , and Ca[MeCB 11 Cl 11 ] 2 ·2( o ‐DFB), 3· 2( o ‐DFB), ( o ‐DFB = 1,2‐difluorobenzene) including the structure of 2· 4( o ‐DFB) are described. The large size of the Ca 2+ cation is reflected by the coordination geometry with the Ca center being coordinated by three Cl donors from each of the carborate anions and one F donor from each of the two coordinated solvent molecules. Based on 11 B NMR and DOSY NMR studies, the salts 1 , 2 and 2· 2( o ‐DFB) form close ion pairs in PhBr and o ‐DFB solutions. The Fluoride Ion Affinities (FIA) in PhBr for the salts 1 and 2· 2( o ‐DFB) were DFT‐calculated (ωB97XD/6–31 + G**) at 211.3 kJ mol −1 and 217.5 kJ mol −1 , respectively, which is below that of the landmark Lewis acid B(C 6 F 5 ) 3 (241.5 kJ mol −1 ). The Ca 2+ center in salt 1 is sufficiently Lewis acidic to coordinate 1,5‐cyclooctadiene (1,5‐COD) and 2,6‐octadiyne and to catalyze the hydrosilylation of 1‐hexene and several alkynes, albeit slowly. Compound 1 also displays moderate activity as a catalyst for transfer hydrogenation catalysis and carbonyl‐olefin metathesis (COM), a first for Ca compounds.

  • Chemical Aspects of Allergic Contact Dermatitis: A 21 st Century Perspective

    Elena Giménez-Arnau, Bertrand Vileno, David W Roberts
    Current Treatment Options in Allergy, 2025, 12 (1), pp.17. ⟨10.1007/s40521-025-00394-z⟩ | Publiée le 27 juin 2025
    Article dans une revue

    Purpose of review: Although the biological mechanism of skin sensitization is a quite complex multistage process, the sensitization potency (or absence of potency) of a chemical is dependent on its chemical properties. Here we present an overview of the advances that have been made in our understanding of the chemical properties that determine sensitization potency, and how this understanding can be applied to rationalize existing data and to make predictions for new chemicals. Recent findings: It has been known for many decades that for a chemical to be a sensitizer it must be able to form a covalent reaction product with skin protein. There are several reaction mechanisms by which these covalent products can be formed. Five major mechanisms in which the sensitizing chemical is electrophilic are recognized. For each of these mechanisms we summarise how these are related to chemical structure and what is now understood about the relationship between chemical properties and sensitization potency. A further mechanistic domain recently recognized, covering chemicals reacting as nucleophiles, is also discussed. Recent developments have made it possible to investigate free radical chemistry in cutaneo, and we discuss how these can be applied to investigate free radical sensitization mechanisms.

  • Quantum Hydrogen Tunneling in an Iridium Dihydride Complex

    Mustapha Hamdaoui, Yann Cornaton, Xingyu Lu, Xiaohuo Shi, Huan Zhang, Jiyong Liu, Bernhard Spingler, Jizeng Sun, Jean-Pierre Djukic, Simon Duttwyler
    Journal of the American Chemical Society, 2025, ⟨10.1021/jacs.4c17482⟩ | Publiée le 25 juin 2025
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    <div><p>Quantum mechanical tunneling (QMT) is the mechanism by which a particle can pass through a high potential energy barrier. Although rooted in quantum physics, QMT influences key chemical reactions in a number of ways. However, the significance and scope of QMT are not adequately considered by our current knowledge of chemical reactivity and catalysis where its contribution remains challenging to assess. Here, we show that a new iridium dihydride complex IrH2 bearing a N,B-bidentate pyridine carboranyl ligand [(C 5 H 4 N)CB 11 H 10 ] undergoes H•••H exchange coupling via QMT, as supported by variable temperature NMR studies showing large temperature-dependent exchange coupling constants J H-H (99-162 Hz), non-linear Arrhenius behavior of the exchanging hydrogens and the absence of detectable J H-D coupling in the deuterium enriched complex IrHD. These observations agree with the predicted existence of quantum exchange coupling in metal dihydrides reported by Zilm and Heinekey [J. Am. Chem. Soc. 1990, 112, 3, 920-929]. The observed high relaxation rates T 1,min (0.250-0.262 seconds) support the assignment for IrH2 as being a metal dihydride rather than a nonclassical dihydrogen complex, thus ruling out any major involvement from a classical scalar coupling to the observed large J H-H coupling constants. The reactivity of complex IrH2 against various bases, nucleophiles and electrophiles was investigated, and X-ray photoelectron spectroscopy (XPS) as well as computational studies were conducted, all of which support an Ir in the formal +III oxidation state for IrH2.</p></div>

  • Relaxing amid Three: Slow Magnetization Relaxation in Three‐Coordinate Chromium(II) N‐Heterocyclic Carbene Complexes

    Gabriela Handzlik, Irene Ligielli, Sakshi Nain, Rishu Khurana, Md Ehesan Ali, Evangelos Papangelis, Charalampos Papapanagis, Corinne Bailly, Nikolaos Tsoureas, Marianna Danopoulou, Costas Bethanis, Pierre Braunstein, Dawid Pinkowicz, Jurek Krzystek, Panayotis Kyritsis, Andreas A Danopoulos
    Chemistry - A European Journal, 2025, 31 (39), pp.e202500607. ⟨10.1002/chem.202500607⟩ | Publiée le 24 juin 2025
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    Three-coordinate, paramagnetic CrII complexes of type [Cr(amido)nBnm(NHC)], NHC = N, N’-bis-(2,4,6-trimethylphenyl)-imidazol-2-ylidene (IMes); N, N’-bis-(2,6-di-isopropylphenyl)-imidazol(in)-2-ylidene, (S)IDiPP; N, N’-bis-(2,6-di-isopropylphenyl)-imidazol-4-ylidene, (aIDiPP); amido = N(SiMe3)2, NH(DiPP); Bn = benzyl, n = 2, m = 0; n = 1, m = 1, were prepared by substitution or aminolysis and thermolysis methods from [Cr{N(SiMe3)2}2(THF)2] or [CrBn2((S)IDiPP)], respectively. Depending on the nature of the NHC and the amido ligands, different geometries at CrII (ranging from distorted trigonal planar, to extended Y-, compressed Y-, and distorted T-shaped) and conformations, were observed. HFEPR spectroscopy was employed to accurately determine spin Hamiltonian parameters, consisting of zero-field splitting (axial D and rhombic E components) and g-values, of five S = 2 complexes exhibiting D and E/D in the range from −2.98 to −1.63 cm−1 and 0.026 − 0.069, respectively. AC magnetometry established slow magnetization relaxation in three complexes, operating by Raman or combined Raman-Orbach processes. Ab initio calculations provided computed zfs values, in good agreement with those obtained by HFEPR. Magnetostructural comparisons are made within this three-coordinate CrII family, as well as with previously studied two- or four- coordinate CrII complexes.

  • In Vitro Evaluation of Silver-NHC Complexes Against a Clinical Isolate of Acanthamoeba castellanii: Time- and Dose-Dependent Effects

    Zübeyda Akın-Polat, Neslihan Şahin, Shaima Hkiri, Bui Minh Thu Ly, İsmail Özdemir, David Sémeril
    Inorganics, 2025, 13 (6), pp.204. ⟨10.3390/inorganics13060204⟩ | Publiée le 18 juin 2025
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    The synthesis of a series of six chloro[N-alkyl-N-cinnamyl-benzimidazol-2-yliden]silver(I) complexes was successfully achieved, wherein allyl (3a), methoxymethyl (3b), benzyl (3c), 3-fluorobenzyl (3d), 4-fluorobenzyl (3e) and 4-methyl-benzyl (3f) substituents were grafted on the benzimidazole ring. The isolated silver N-heterocyclic carbene (NHC) complexes were identified by microanalyses and mass spectrometry and characterized by FT-IR and NMR spectroscopic techniques. Conclusive evidence for the structures of complexes 3c and 3d was provided by single-crystal X-ray crystallography. The in vitro inhibitory activity of the six Ag-NHC complexes was tested against trophozoites and cysts of the pathogenic Acanthamoeba castellanii strain and the efficacy sequence is as follows: 3d &gt; 3c &gt; 3f &gt; 3a &gt; 3b &gt; 3e. At a concentration of 100 µM in complexes 3c, 3d and 3f and after 72 h of incubation, 5.3, 3.2 and 6.3% A. castellanii trophozoite viabilities were observed, respectively. The utilization of elevated silver(I) drug concentrations, 1000 µM, resulted in the near-total eradication of pathogenic protozoa.

  • Molecular Modeling Is Key to Understanding Supramolecular Resorcinarenyl Capsules, Inclusion Complex Formation and Organic Reactions in Nanoconfined Space

    Maxime Steinmetz, David Sémeril
    Molecules, 2025, 30 (12), pp.2549. ⟨10.3390/molecules30122549⟩ | Publiée le 11 juin 2025
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    This review highlights how advances in silico techniques have shed new light on phenomena in confined supramolecular resorcinarene-based systems. Computational studies have provided detailed insights into capsule formation, their dynamic behavior, guest encapsulation and reaction mechanisms within these hosts, often revealing information that experimental methods cannot reach. The focus is placed on the self-assembly of resorcin[4]arenes, pyrogallol[4]arenes, velcrands, and octa acid systems. These computational studies complement experimental findings and, in many cases, offer new perspectives that are inaccessible using experimental techniques alone. Supramolecular architectures are growing in complexity the role of in silico approaches is becoming indispensable. They offer a way to design rationally and understand host–guest chemistry more deeply.

  • The Different Cellular Entry Routes for Drug Delivery Using Cell Penetrating Peptides

    Michael Okafor, David Schmitt, Stéphane Ory, Stéphane Gasman, Christelle Hureau, Peter Faller, Nicolas Vitale
    Biology of the Cell, 2025, 117 (6), ⟨10.1111/boc.70012⟩ | Publiée le 9 juin 2025
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    <div><p>The cell plasma membrane acts as a semi-permeable barrier essential for cellular protection and function, posing a challenge for therapeutic molecule delivery. Conventional techniques for crossing this barrier, including biophysical and biochemical methods, often exhibit limitations such as cytotoxicity and the risk of genomic integration when viral vectors are involved. In contrast, cell-penetrating peptides (CPPs) offer a promising non-invasive means to deliver a broad range of molecular cargoes, including proteins, nucleic acids and small molecules, into cells. CPPs, typically 5 to 30 amino acids long and rich in basic or non-polar residues, interact favourably with different cell membranes. These peptides have evolved since the discovery of the HIV-1 TAT peptide in the 1980s, expanding into various CPP families with diverse therapeutic applications. CPPs can form covalent or noncovalent complexes with their cargo, influencing their stability and efficacy. Based on their sequence properties and interactions, CPPs can be amphipathic or non-amphipathic, with distinct mechanisms of membrane penetration, such as direct penetration and endocytosis. While their uptake mechanisms are complex and not fully elucidated, ongoing optimization aims to enhance CPP specificity and efficacy. CPPs have demonstrated potential in drug delivery, gene therapy, cancer treatment and vaccine development, addressing key safety and efficiency concerns associated with viral vectors. This review explores the classification, mechanisms of action and therapeutic potential. It focuses on the intracellular vesicular trafficking of CPPs, highlighting their role as transformative tools in advancing cellular therapies and medical treatments.</p></div>

  • Chalcogen Bonding with Telluronium Cations: toward Selective Population of Tellurium σ-Holes by Lewis Bases

    Loic Groslambert, Yann Cornaton, Patrick Pale, Matej Ditte, Alexandre Tkatchenko, Jean-Pierre Djukic, Victor Mamane
    Journal of Organic Chemistry, 2025, ⟨10.1021/acs.joc.5c00744⟩ | Publiée le 6 juin 2025
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    <div><p>The reaction of tris [3,5-bis(trifluoromethyl)phenyl]telluronium tetrakis [3,5bis(trifluoromethyl)phenyl]borate (BArF -) salt with phosphine oxides O=PR3 in 1,2dichloroethane is exothermic and leads to the population of the three Te -holes. Quite unprecedented, careful adjustment of the stoichiometry of reagents allowed the selective crystallization of the Lewis adducts containing one, two or three Te-bonded O=PR3, according to X-ray diffraction. 1 H and 19 F Diffusion ordered NMR spectroscopy-monitored titrations of the telluronium salt by O=PPh3 reveal the growth of the hydrodynamic volume of the various cationic adducts, alongside a unique behavior of the BArF -counter-ion that suggests its aggregation at high cationic molecular sizes. Isotherm Titration Calorimetry experiments show that the association equilibrium constants of O=PR3 binding to Te -holes follow the order Ka1 &gt; Ka2 &gt; Ka3, with respective values decreasing by 1 up to 2 orders of magnitude as the -holes are populated. Analysis of Te-O bonding by DFT methods confirms their dominant coulombic character. The minor covalent character is nonetheless required to ensure the telluronium-ligand cohesion. DFT calculations of the association thermochemistry raise the tangible contribution of ion 'pairs' to the association enthalpy as a major issue for modeling: the allegedly "non-coordinating" BArF -taking part in elusive multipolar ion-pairs is far from being an irrelevant thermochemical contributor.</p></div>

  • Insights Into the Enantioseparation of Polyhalogenated 4,4′‐Bipyridines With a Cellulose Tris(3,5‐Dimethylphenylcarbamate)‐Based Chiral Column by Using Supercritical Fluid Chromatography

    Emmanuelle Lipka, Roberto Dallocchio, Barbara Sechi, Mikheil Rukhaia, Giorgi Jibuti, Bezhan Chankvetadze, Victor Mamane, Paola Peluso
    Electrophoresis, 2025, ⟨10.1002/elps.8156⟩ | Publiée le 31 mai 2025
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    <div><p>In the last decade, by integrating experimental and computational analyses, it was demonstrated that halogen bond (HaB) may contribute to binding and enantiorecognition mechanisms underlying the HPLC enantioseparation of halogenated chiral analytes by using cellulose tris(3,5-dimethylphenylcarbamate) (CDMPC)-based chiral columns and n-hexane-based mixtures as mobile phases. When used as a pivotal component of the mobile phase in supercritical fluid chromatography (SFC), carbon dioxide is often considered as an n-hexane-like nonpolar solvent because of its low dielectric constant and zero molecular dipole moment. On the other hand, carbon dioxide may also serve as hydrogen bond (HB) and HaB acceptor due to the presence of nonbonding electrons on the two oxygen atoms, interacting with analyte enantiomers, chiral selectors, and co-solvents. On this basis, we report herein the results of a study aiming at evaluating the impact of using carbon dioxide in SFC in place of n-hexane in HPLC on halogen-dependent enantioseparations by using atropisomeric halogenated 4,4′-bipyridines as analytes and Lux Cellulose-1 as CDMPC-based chiral column. The experimental investigation was complemented by a computational study performed using (a) quantum mechanics (QM) calculations to map and quantify noncovalent interactions possibly underlying the contact of the analytes with carbon dioxide and with the distinctive pendant groups of the CDMPC and (b) molecular dynamics (MD) simulations to visualize noncovalent interactions acting in the analyte 1/CDMPC chromatographic system in different media. The use of MD simulations to model enantioseparations performed in carbon dioxide-based media was not reported in the literature so far.</p></div>

  • Electrical detection of magnetic perturbations through the magnetoelectric effect of a molecular spin triangle

    Balwant Singh Chauhan, Ratnamala Chatterjee, Philippe Turek, Athanassios Boudalis
    Journal of the American Chemical Society, 2025, 147 (23), pp.20063-20070. ⟨10.1021/jacs.5c05601⟩ | Publiée le 27 mai 2025
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    Dielectric and magnetoelectric (ME) studies were conducted on polycrystalline samples of the molecular spin triangle [Fe 3 O(O 2 CPh) 6 (py) 3 ]ClO 4 .py (Fe 3 ) and on its diamagnetic isostructural Ga III analogue (Ga 3 ). Dielectric studies revealed a thermally activated process between approx. 15-60 K, attributed to the freezing-unfreezing of the crystallographically disordered pyridine solvates, with a paraelectric behavior above ~68 K. Magnetoelectric studies revealed a second-order ME effect for Fe 3 , which remained significant above liquid-nitrogen temperatures. Similar experiments on Ga 3 allowed to control for the instrumental baseline response and to confirm the origin of the signal as the ME effect of Fe 3 . The thermal evolution of the ME coupling coefficient (α ME ) showed no discontinuities around the temperature of the freezing-unfreezing processes, indicating that it is unrelated to them. These latter are assigned the disordered-diamagnetic sublattice consisting of the pyridine solvates and perchlorate counteranions. In turn, the ME coupling is assigned to the ordered-magnetic sublattice consisting of the Fe 3 trinuclear cations. These results demonstrate that Fe 3 can directly transform magnetic perturbations to electric signals at the single-molecule level, without the need of structural transformations or long-range magnetic ordering.

  • From Desferrioxamine B Umpolung to an Enantiopure Bifunctional Chelator for 89 Zr‐immunoPET

    Laurie Zujew, Laurent Raibaut, Jean‐claude Chambron
    Chemistry - A European Journal, 2025, 31 (34), pp.e202501114. ⟨10.1002/chem.202501114⟩ | Publiée le 15 mai 2025
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    Abstract Promising results in preclinical diagnosis based on 89 Zr‐immunoPET have fostered the development of efficient chelators for this tetravalent metal. Leads in this area are octadentate ligands obtained by extension of the desferrioxamine B trihydroxamic acid DFO with a fourth bidentate ligand. In the approach reported here, the latter is a natural 6‐membered cyclic hydroxamic acid deriving from ( L )‐ornithine. Its coupling to DFO via an ( L )‐lysine spacer required that the genuine amine function of the DFO terminus be changed to a carboxylic acid. Such a requirement prompted us to explore short sequences of chemical transformations that would challenge total syntheses leading to the same products. As a matter of fact, the target C ‐terminal DFO analogue was obtained in benzyl‐protected form in three steps from commercially available DFO in 16% overall yield. Our short‐step approach allowed us to implement other functionalities without DFO extension: ‐OH, ‐OTs, ‐CHO, ‐C(O)CH 3 , and ‐CH═CH 2 .

  • Cis-Chelating Diphosphanes for Intracavity Nickel(II)-Catalyzed Ethylene Oligomerization

    Yang Li, Sara Figueirêdo de Alcântara Morais, Mingyang Han, Tuan‐anh Phan, Geordie Creste, Matthieu Jouffroy, Dominique Matt, Jean‐pierre Djukic, Yann Cornaton, Pierre Braunstein, Katrin Pelzer, Dominique Armspach
    Chemistry - A European Journal, 2025, 31 (34), pp.e202501188. ⟨10.1002/chem.202501188⟩ | Publiée le 9 mai 2025
    Article dans une revue

    Four cis-chelating diphosphanes derived from cyclodextrins (CDs), each featuring a distinct intracavity environment, compel NiII or PdII metal centers to reside within α- or β-CD cavities. Nickel(II) complexes of these metal-confining ligands act as active catalysts in ethylene oligomerization upon activation with modified methylaluminoxane (MMAO). The size of the cavity and the position of the P2Ni fragment relative to the cavity affect both the activity and selectivity of the reaction. In all instances, 1-butene is the major product (up to 98% C4 products and 90% 1-butene within the C4 fraction). Extensive theoretical studies with state-of-the-art methods carried out on the most selective system suggest that the CD cavity restricts isomerization pathways by limiting the mobility of the coordinated olefin in this constrained supramolecular environment, thereby enhancing α-olefin formation.

  • Geochemical Study of Bitumen Residues on Potsherds from the al-Qusur Monastery (7th–9th c. CE): Composition and Origin

    Jacques Connan, Julie Bonnéric, Rémi Perrogon, Michael H Engel, Renaud Gley, Alex Zumberge, Philippe Schaeffer
    Molecules, 2025, 30 (9), pp.2006. ⟨10.3390/molecules30092006⟩ | Publiée le 30 avril 2025
    Article dans une revue

    Geochemical and isotopic analysis of bitumen lining potsherds from the al-Qusur monastery (second half of the 7th c. CE and the middle of the 9th c. CE), at the central part of Failaka Island (Kuwait Bay), confirms the presence of two distinct compositional categories that can be matched to contemporary sources from two different areas of Iran: the Kermanshah province on one side, and the Khuzestan–Fars–Busher provinces on the other side. Potsherds comprise different types: TORP-S amphorae, TORP-C amphorae, SPORC storage jar, turquoise alkaline-glazed jar (TURQ.T), and CREAC jar. There is no relationship between the type of potsherd and the origin of bitumen. The bitumen coating SPORC jar, first identified as a kind of juice strainer to filter the «garum-like juice», was examined in greater details to try to identify traces of fish sauce mentioned in the Arabic kitchen books as ‘murri’, and quite similar to the Roman garum. The mineralogical analysis exhibits the classical minerals of archaeological mixtures (quartz, calcite, dolomite) and no halite. Hydrocarbons, alcohols, and methyl esters show a typical biodegraded bitumen signature but no fatty acids and terpenoids. It seems that the bitumen matrix has not adsorbed any molecules from the presumed «garum» filtered in the basin.

  • Stable Mg 2+ Dication Weakly Stabilized/Coordinated in Solution: Synthesis, Structure, Reactivity, and Use in Catalysis

    Xuejuan Xu, Alain Chaumont, Christophe Gourlaouen, Satawat Tongdee, Sandip Munshi, Béatrice Jacques, Rudolf Wehmschulte, Samuel Dagorne
    Angewandte Chemie International Edition, 2025, 64 (26), ⟨10.1002/anie.202506266⟩ | Publiée le 27 avril 2025
    Article dans une revue

    Abstract The first soluble and stable Mg 2+ dication stabilized only by weakly coordinating and chemically robust carborate anions [HexCB 11 Cl 11 ] − is described. Mg[HexCB 11 Cl 11 ] 2 ( 1 ), prepared by reaction of Mg( n Bu) 2 with 2 equiv of [Ph 3 C][HexCB 11 Cl 11 ], consists, in the solid state, of a central Mg 2+ surrounded by two [HexCB 11 Cl 11 ] − anions. In solution, experimental and classical molecular dynamics simulations (cMD) agree with cation/anion association being retained, reflecting the high electrophilicity of the Mg center. Yet, reflecting only weak anion/cation interactions, species 1 polymerizes 1‐hexene and coordinates alkynes. However, 1 displays no reaction with HSiEt 3 at room temperature, consistent with a low hydridicity of the hard (HSAB) Mg 2+ center. Contrasting with 1 (FIA = 264 kJ mol −1 ; FIA: Fluoride Ion Affinity), salt Mg[( n Bu) 3 NB 12 H 4 Cl 7 ] 2 ( 2 ), incorporating the more basic ammoniododecaborate [( n Bu) 3 NB 12 H 4 Cl 7 ] − anion, is significantly less Lewis acidic (FIA = 214.7 kJ mol −1 ) and unreactive with alkenes and alkynes. Salt 1 effectively catalyzes alkene/alkyne hydrosilylation via an initial alkene/alkyne coordination/initiation, as suggested by experimental and computational data. It also efficiently catalyzes (with a catalyst loading down to 0.1 mol%) the hydrosilylation of CO 2 to CH 4 in the presence of HSiEt 3 . Salt 1 smoothly promotes the catalytic transfer hydrogenation of 1,1‐diphenylethylene, and it is also an active imine hydrogenation catalyst in the presence of H 2 .

  • Photocatalytic oxidation of biologically relevant reducing agents by [Ru(bpy)3](PF6)2

    Iman Doumi, Daniella Al Othman, Shao-An Hua, Vincent Lebrun, Franc Meyer, Peter Faller
    Chemical Communications, 2025, 61 (41), pp.7486 - 7489. ⟨10.1039/d5cc01702e⟩ | Publiée le 23 avril 2025
    Article dans une revue

    Ru complexes are widely studied in photodynamic therapy. The type I mechanism of action is based on a photoinduced electron transfer from the complex to O 2 and needs an electron donor to be catalytic. Little is known about electron donors among physiologically relevant compounds. Hence, we investigated the oxidation of ascorbate, NADH, cysteine, and glutathione with the canonical [Ru(bpy) 3 ](PF 6 ) 2 as well as a derivative with a peripheral disulphide unit, [Ru( S-S bpy)(bpy) 2 ](PF 6 ) 2 . The established reactivity order is ascorbate 4 NADH B cysteine 4 glutathione. Scheme 1 Hypothetical mechanism of the oxidation of the reducing agent (S red ) catalyzed by [Ru(bpy) 3 ] 2+ upon irradiation (left) and structure of the [Ru(bpy) 3 ] 2+ and [Ru( S-S bpy)(bpy) 2 ] 2+ complexes (right).

  • The salty tango of brine composition and UV photochemistry effects on Halobacterium salinarum cell envelope biosignature preservation

    Lucas Bourmancé, Arul Marie, Rémy Puppo, Sébastien Brûlé, Philippe Schaeffer, Maud Toupet, Ruben Nitsche, Andreas Elsaesser, Adrienne Kish
    Communications Biology, 2025, 8 (1), pp.602. ⟨10.1038/s42003-025-08007-w⟩ | Publiée le 11 avril 2025
    Article dans une revue

    Hypersaline environments, including brines and brine inclusions of evaporite crystals, are currently of great interest due to their unique preservation properties for the search for terrestrial and potentially extraterrestrial biosignatures of ancient life. However, much is still unclear about the specific effects that dictate the preservation properties of brines. Here we present the first insights into the preservation of cell envelope fragments in brines, characterizing the relative contributions of brine composition, UV photochemistry, and cellular macromolecules on biosignature preservation. Cell envelopes from the model halophile Halobacterium salinarum were used to simulate dead microbial cellular remains in hypersaline environments based on life as we currently know it. Using different Early Earth and Mars analogue brines, we show that acidic and NaCl-dominated brine compositions are more predisposed to preserving complex biosignatures from UV degradation, but that the composition of the biological material also influences this preservation. Furthermore, a combinatory effect between chaotropicity and photochemistry occurs, with the relative importance of each being brine-specific. These results provide an experimental framework for biosignature detection in hypersaline environments, emphasizing the need for laboratory simulations to evaluate preservation properties of each potential brine environment, on Earth and elsewhere in the solar system.

  • Mechanochemical Generation of Active Pd/BippyPhos Catalyst for Efficient C-N Cross-Coupling in Air

    Deniz Karabiyikli, Alexandre Saad, Sokaina Hammoud, Severine Schneider, Romuald Manca, Jesus Raya, Martine Schmitt, Frédéric Bihel
    ChemSusChem, 2025, ⟨10.1002/cssc.202500545⟩ | Publiée le 7 avril 2025
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    Carbon─nitrogen (C─N) bond-forming cross-coupling reactions catalyzed by palladium-based systems, known as Buchwald-Hartwig aminations, are widely used in natural product synthesis, pharmaceuticals, agrochemicals, and materials science. However, these reactions typically require organic solvents and inert atmospheres, such as argon, increasing environmental, health, and safety concerns. Using electron-rich bulky phosphine ligands in combination with [Pd(π-cinnamyl)Cl] 2 , a highly active palladium catalyst capable of achieving efficient C─N bond formation in the solid state is generated. Remarkably, while previous studies showed that the formation of this palladium-phosphine complex occurs only in protic solvents such as water or alcohols, but not in classical organic solvents, its generation in the absence of any solvent is demonstrated, as confirmed by solid-state 31 P nuclear magnetic resonance, supporting its role as the active catalytic species. This process enables the coupling of a broad range of aryl bromides and chlorides with amines, anilines, amides, carbamates, or ureas, delivering good to excellent yields. This mechanochemical method operates with minimal palladium loading and proceeds efficiently in air, offering a practical and sustainable alternative to traditional solution-phase reactions.

  • The role of flexibility in a strapped porphyrin hemoprotein model

    Mathilde Berthe, Corinne Boudon, Jean Weiss, Jennifer Wytko
    Journal of Porphyrins and Phthalocyanines, 2025, 29 (03n04), pp.394-399. ⟨10.1142/S1088424625500324⟩ | Publiée le 4 avril 2025
    Article dans une revue

    The role played by the distal coordination site’s flexibility on oxygen reduction was investigated by rotating ring-disk electrode experiments for a bipyridine-strapped iron(III) porphyrin mimic of cytochrome [Formula: see text] oxidase. Compared to a phenanthroline counterpart, the more flexible bipyridine strap improved by up to 15% the selectivity of the four-electron reduction of oxygen to water over the two-electron reduction in the presence of copper(I) coordinated to the distal bipyridine and [Formula: see text]-methylimidazole bound at the proximal site. The more modest gain in overpotential observed for the bipyridine-strapped porphyrin than for the phenanthroline derivative was attributed to a difference in stability of the iron(III) porphyrins that affects reduction to iron(II) and oxygen binding. Overall, the rotational flexibility imparted by the bipyridine strap allows the ferric porphyrin to remain relatively flat, thus improving its electrocatalytic performance.

  • Specific sample configuration for studying photogenerated electron transfer at the semiconductor/water interface by Electron Paramagnetic Resonance

    Pablo Abarca Martinez, Marc Basler, François Courtier, Laurène Youssef, Cédric Jaoul, Patrice Valorge, Nolwenn Le Breton, Bertrand Vileno, David Martel
    Solar Energy Materials and Solar Cells, 2025, 282, pp.113371. ⟨10.1016/j.solmat.2024.113371⟩ | Publiée le 1 avril 2025
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    <div><p>Photogeneration of electrons from amorphous phase and anatase phase thin films of titanium oxide in contact with water was monitored by Electron Paramagnetic Resonance. The semiconducting oxide thin films were deposited on glass fibers of 250 µm diameter by Reactive Magnetron Sputtering and were centered inside capillaries of ca. 1 mm diameter filled with aqueous solution of a paramagnetic probe molecule. This proof of concept, non-restrictive to titanium oxide, makes it possible to reuse of the same fiber for multiple measurements and, as it respects the cylindrical symmetry, it should provide mechanistic investigations with reliable and quantifiable data on photogenerated electron transfer at the semiconductor/water interface.</p></div>

  • Effect of Cationic Dopant on the Physicochemical Properties and Visible Light Photocatalytic Degradation Activity of (M,N) Codoped TiO 2 Nanoparticles (M = Nb, Ta, W)

    Qingyang Xi, Marc Lenertz, Nolwenn Le Breton, Clément Maheu, Valérie Keller, Bertrand Vileno, Thomas Cottineau
    ACS Applied Nano Materials, 2025, 8 (14), pp.7073-7084. ⟨10.1021/acsanm.5c00206⟩ | Publiée le 31 mars 2025
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    (M,N) codoped TiO2 nanoparticles (with M = Nb, Ta, or W) were synthesized via a sol-gel process, followed by a thermal nitridation in ammonia. The doping cation role in determining the codoped materials' physicochemical properties and their photocatalytic activity was studied. In situ temperature-dependent XRD analysis indicated an inhibition of rutile formation due to cation doping for all codoped TiO2 nanomaterials. Depending on the thermal nitridation conditions, two types of absorption behaviors have been identified for each (M,N) codoped sample family: mild nitridation induced an absorption increase between 400 and 550 nm, while harsh nitridation induced additional absorption at a longer wavelength (>550 nm). Furthermore, the presence of W in the TiO2 lattice has been revealed to be more favorable than Nb and Ta to promote nitrogen insertion. A similar charge compensation mechanism, involving defects such as oxygen vacancies, was revealed for (Nb,N) and (Ta,N) codoped materials: low defect concentrations were achieved by the mild nitridation, while the harsh nitridation created a large amount of Ti3+ acting as charge recombination centers. On the opposite end, the defect concentration for (W,N) codoped TiO2 nanoparticles remains low under both mild and harsh nitridation conditions. Additionally, for (W,N) codoped TiO2 samples, W5+ was created by the harsh nitridation condition instead of Ti3+, resulting in an improved visible light photocatalytic activity.

  • Probing skin photoallergens in reconstructed human epidermis: An EPR spin trapping investigation

    Yannick Port-Lougarre, Guillaume Voegeli, Bertrand Vileno, Elena Giménez‐arnau
    Photochemistry and Photobiology, 2025, 101 (2), pp.275-281. ⟨10.1111/php.14010⟩ | Publiée le 25 mars 2025
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    Photoallergic contact dermatitis is a skin disease caused by combined exposure to photoreactive chemicals and sunlight. Exposure to allergens and the risk of skin sensitization is an essential regulatory issue within the industry. Yet, only few non-validated assays for photoallergy assessment exist as the pathogenesis is not fully deciphered. Improving such assays and/or developing new ones require an understanding of the chemical mechanisms involved. The first key event in the photosensitization process, namely chemical binding of the photoallergen to endogenous proteins, is thought to proceed via photo-mediated radicals arising from the photoallergen. Moreover, the mechanism of action of these radicals if formed in the epidermis is not known and far from being unraveled. We present here an original proof-of-concept methodology to probe radical generation from allergens in contact with photoexposed skin, using electron paramagnetic resonance and spin trapping in a reconstructed human epidermis model mimicking real-life exposure scenarios.

  • Cathelicidin-BF: A Potent Antimicrobial Peptide Leveraging Charge and Phospholipid Recruitment against Multidrug-Resistant Clinical Bacterial Isolates

    Evgeniy Salnikov, Morgane Adélaïde, Francisco Ramos-Martín, Ahmad Saad, Jennifer Schauer, Martina Cremanns, Mariam Rima, Christopher Aisenbrey, Saoussen Oueslati, Thierry Naas, Niels Pfennigwerth, Söeren Gatermann, Catherine Sarazin, Burkhard Bechinger, Nicola D’amelio
    Journal of the American Chemical Society, 2025, 147 (13), pp.11199-11215. ⟨10.1021/jacs.4c17821⟩ | Publiée le 24 mars 2025
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    Cathelicidin-BF (CatBF) is a LL-37 homologous antimicrobial peptide (AMP) isolated from Bungarus fasciatus with an exceptional portfolio of antimicrobial, antiviral, antifungal, and anticancer activities. Contrary to many AMPs, it showed a good pharmacological profile with a half-life of at least 1 h in serum and efficacy against bacterial infections in mice. To evaluate its potential against resistant nosocomial infections, we assessed its activity against 81 clinically relevant resistant bacterial isolates. CatBF exhibited minimum inhibitory concentrations (MICs) as low as 0.5 μM against carbapenem-resistant Acinetobacter baumannii, Klebsiella pneumoniae, and Escherichia coli. Its wide-ranging activity, unaffected by resistance mechanisms or Gram phenotype, prompted us to investigate its molecular mode of action. NMR spectroscopy, paramagnetic probes, and molecular dynamics (MD) simulations were employed to define its structure, penetration depth, and orientation in various membrane models, including micelles, bicelles, oriented bilayers, and vesicles. We found that CatBF's potent activity relies on its strong charge, allowing membrane neutralization at low peptide/lipid ratios and selective recruitment of charged phospholipids. At higher concentrations, a change in peptide orientation reveals membrane invagination and the formation of transient pores possibly leading to bacterial death. Our findings highlight the potential of CatBF as a model for developing resistance-independent agents to combat multidrug-resistant (MDR) bacterial infections.

  • Study of vibrational stationary states of H/Pd(111)

    Oussama Bindech, Fabien Gatti, Souvik Mandal, Roberto Marquardt, Jean Christophe Tremblay
    Molecular Physics, 2025, ⟨10.1080/00268976.2025.2473661⟩ | Publiée le 19 mars 2025
    Article dans une revue

    We study the stationary states and energies of the hydrogen atoms when they are adsorbed on the palladium surface. Our calculations are performed with the improved relaxation method based on the Multi-Configuration Time-Dependent Hartree (MCTDH) ansatz for the solution of the Schrödinger equation. In order to simulate an infinite surface in our calculations, a periodic approach is adopted. It includes an elementary cell given by a slab of five Pd layers where each one contains 3×3 Pd atoms. Vibrational eigenstates reveal several significant quantum mechanical phenomena. In particular, we were able to show in this study the presence of tunneling effects and of a Fermi resonance coupling the localized vibrational modes of the system.

  • Copper(II) Cyclopeptides with High ROS-Mediated Cytotoxicity

    Sonia Boga, David Bouzada, Roi Lopez-Blanco, Axel Sarmiento, Iria Salvadó, David Alvar Gil, José Brea, María Isabel Loza, Natalia Barreiro-Piñeiro, José Martínez-Costas, Silvia Mena, Gonzalo Guirado, Alice Santoro, Peter Faller, M. Eugenio Vázquez, Miguel Vázquez López
    Bioconjugate Chemistry, 2025, 36 (3), pp.500 - 509. ⟨10.1021/acs.bioconjchem.4c00561⟩ | Publiée le 10 mars 2025
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    Cu(II) coordination complexes are emerging as promising anticancer agents due to their ability to induce oxidative stress through reactive oxygen species (ROS) generation. In this study, we synthesized and characterized two novel Cu(II) metallopeptide systems, 1/Cu(II) and 2/Cu(II), derived from the oligocationic bipyridyl cyclopeptides 1 and 2, and designed to enhance the transport of Cu(II) into cells and increase ROS levels. Spectroscopic and electrochemical analyses confirmed the formation of stable metallopeptide species in aqueous media. Inductively coupled plasma mass spectrometry (ICP-MS) studies demonstrated that both metallopeptides significantly increase intracellular Cu(II) accumulation in NCI/ADR-RES cancer cells, highlighting their role as efficient Cu(II) transporters. Additionally, ROS generation assays revealed that 1/Cu(II) induces a substantial increase in intracellular ROS levels, supporting the hypothesis of oxidative stressinduced cytotoxicity. Cell-viability assays further confirmed that both 1/Cu(II) and 2/Cu(II) exhibit strong anticancer activity in a number of cancer cell lines, with IC 50 values significantly lower than those of their free cyclopeptide counterparts or Cu(II) alone, showing an order of activity higher than that of cisplatin. Finally, molecular modeling studies provided further insights into the structural stability and coordination environment of Cu(II) within the metallopeptide complexes. These findings suggest that these Cu(II) cyclometallopeptide systems hold potential as novel metal-based therapeutic agents, leveraging Cu(II) transport and ROS increase as key strategies for cancer treatment.

  • Effect of the Positioning of Metal Centers on a Cavitand in the Ruthenium-Catalyzed N-Alkylation of Amines

    Neslihan Şahin, Christophe Gourlaouen, David Sémeril
    Molecules, 2025, 30 (4), pp.951. ⟨10.3390/molecules30040951⟩ | Publiée le 18 février 2025
    Article dans une revue

    Two bis-ruthenium(II) complexes, namely N,N′-{5,17-diamino-4(24),6(10),12(16),18(22)-tetramethylenedioxy-2,8,14,20-tetrapentylresorcin[4]arene}-bis-[dichloro-(p-cymene)-ruthenium(II)] (1) and N,N′-{5,11-diamino-4(24),6(10),12(16), 18(22)-tetramethylenedioxy-2,8,14,20-tetrapentylresorcin[4]arene}-bis-[dichloro-(p-cymene)-ruthenium(II)] (2) were synthesized and tested as catalysts in the N-alkylation of primary amines with arylmethyl alcohol using the green “hydrogen borrowing” methodology. The catalytic results were compared with those obtained when the N-{5-amino-4(24),6(10),12(16),18(22)-tetramethylenedioxy-2,8,14,20-tetrapentyl-resorcin[4]arene}-[dichloro-(p-cymene)-ruthenium(II)] (3) complex was employed as catalyst. The rate of the N-alkylation of aniline with benzyl alcohol increased in the order 3 &lt; 1 ≪ 2, which highlights the importance of the relative positioning of the two metal centers on the upper rim of the resorcin[4]arene. Theoretical investigations suggest that the grafting of the two “RuCl2(p-cymene)NH2” moieties on two distal aromatic rings of the cavitand allows a cooperative effect between a ruthenium atom and the coordinated amine of the second metal center.

  • Synthesis, antimicrobial and antibiofilm activities of silver(I) complexes with N-alkylbenzimidazole derivatives and their protein interaction modelling study

    Neslihan Şahin, Mohamed Ali Mosrati, Abderrahmen Merghni, İsmail Özdemir, Hayet Sellami, Kawther Bedchiche, Salim Krayiem, Sami Aifa, Dorra Abdelmalek, David Sémeril
    Journal of Molecular Structure, 2025, 1322, pp.140440. ⟨10.1016/j.molstruc.2024.140440⟩ | Publiée le 15 février 2025
    Article dans une revue

    This study investigates the antimicrobial and antibiofilm potential of three silver(I) complexes derived from Nalkylbenzimidazole derivatives: bis[(Z)-1-styryl-benzimidazole]silver(I) nitrate ( 4), bis[(E)-1-styryl-benzimidazole]silver(I) nitrate (5), and bis(1-cinnamyl-benzimidazole)silver(I) nitrate (6). Detailed synthesis and characterization of these complexes are followed by assessments of their efficacy against Staphylococcus aureus, Enterococcus faecalis, Pseudomonas aeruginosa, Escherichia coli, and Candida albicans. Among the tested compounds, complex 6 exhibited the highest antimicrobial activity, with a minimal inhibitory concentration of 6 µmol/L against P. aeruginosa, and significant antibiofilm activity, achieving 67.72 % inhibition at a concentration of 3 µmol/L. These interesting findings led us to conduct a molecular docking study to understand the mechanisms of action by investigating the interactions between the silver(I) complexes and some key protein targets involved in bacterial and fungal biofilm formation, including (p)ppGpp synthetase/hydrolases, FtsZ proteins, and pyruvate kinases. This comprehensive approach, combining experimental and computational analyses derived from N-alkylbenzimidazole derivatives, particularly complex 6, which exhibits remarkable efficacy against various pathogens, reveals promising therapeutic applications of these silver(I) complexes and advances our understanding of their potential mode of action against biofilm-associated infections.

  • Hidden complexity of α7 nicotinic acetylcholine receptor desensitization revealed by MD simulations and Markov state modeling

    Mariia Avstrikova, Paula Milán Rodríguez, Sean Burke, Ryan Hibbs, Jean-Pierre Changeux, Marco Cecchini
    Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (7), pp.e2420993122. ⟨10.1073/pnas.2420993122⟩ | Publiée le 13 février 2025
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    The α7 nicotinic acetylcholine receptor is a pentameric ligand-gated ion channel that plays an important role in neuronal signaling throughout the nervous system. Its implication in neurological disorders and inflammation has spurred the development of numerous compounds that enhance channel activation. However, the therapeutic potential of these compounds has been limited by the characteristically fast desensitization of the α7 receptor. Using recent high-resolution structures from cryo-EM, and all-atom molecular dynamic simulations augmented by Markov state modeling, here we explore the mechanism of α7 receptor desensitization and its implication on allosteric modulation. The results provide a precise characterization of the desensitization gate and illuminate the mechanism of ion-pore opening/closing with an agonist bound. In addition, the simulations reveal the existence of a short-lived, open-channel intermediate between the activated and desensitized states that rationalizes the paradoxical pharmacology of the L247T mutant and may be relevant to type-II allosteric modulation. This analysis provides an interpretation of the signal transduction mechanism and its regulation in α7 receptors.

  • Photocatalytic Recovery of Noble Metals by Covalent Silyl Polyoxophosphotungstate–Porphyrin Copolymers

    Zhaohui Huo, Brahim Akhsassi, Jiamin Yu, Mingxiu Zheng, Tongying Lan, Qianting He, Corinne Boudon, Guojun Xu, Anna Proust, Guillaume Izzet, Laurent Ruhlmann
    Inorganic Chemistry, 2025, 64 (7), pp.3371-3383. ⟨10.1021/acs.inorgchem.4c04890⟩ | Publiée le 12 février 2025
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    The photocatalytic recovery of noble metals on photosensitive semiconductors such as TiO2 is well-established for forming M/TiO2 but has notable drawbacks. TiO2 suffers from low conversion efficiency due to significant recombination of photogenerated electron–hole pairs. Its wide energy band gap (3.2 eV) also restricts excitation to high-energy UV light, limiting its use with solar energy. This study proposes an efficient alternative using hybrid polyoxometalate (POM)–porphyrin copolymers for the photocatalytic recovery of Ag and Pt under visible light. Copolymeric films composed of hybrid polyoxometalates and porphyrins have been obtained by the electrooxidation of 5,15-(di-p-tolyl)porphyrin (H2T2P) or 2,3,7,8,12,13,17,18-octaethylporphine zinc(II) (ZnOEP) together with Keggin or Wells–Dawson-type organosilyl polyoxophosphotungstate ([PW11Si2O40C26H16N2]TBA3 or [P2W17Si2O62C26H16N2]TBA6). In these films, porphyrin subunits can be excited under visible illumination, acting as photosensitizers that transfer electrons to the polyoxometalate catalysts. Notably, POM–porphyrin films demonstrated high efficiency in Pt(IV) photoreduction over repeated cycles without catalyst degradation.

  • Generation of electronically unsaturated carbon sites on carbon materials and study of their magnetic and chemical properties

    Mathieu Vidal, Maryam Dehaghani, Javier Navarro-Ruiz, Takeharu Yoshii, Keigo Wakabayashi, Hirotomo Nishihara, Mathias Barreau, Fabrice Bournel, Jérôme Volkman, Guillaume Clet, Spirydon Zafeiratos, Nolwenn Le Breton, Pascal Puech, Iann Gerber, Athanassios Boudalis, Thomas Blon, Philippe Serp
    Journal of Physical Chemistry C, 2025, 129 (7), pp.3539-3560. ⟨10.1021/acs.jpcc.4c07975⟩ | Publiée le 10 février 2025
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    The presence of defects in carbon materials, such as electronically unsaturated carbon sites, can profoundly affect their magnetic ordering and chemical reactivity. The detailed analysis of these species (edge states, σ free radicals, or carbene), which are pivotal for many applications, remains a significant challenge for carbon bulk materials. Today, the engineering of defective carbon materials often relies on the use of hardly up-scalable physical methods not accessible to synthetic chemists. It is therefore important to develop simple and scalable methods to generate well-defined electronically unsaturated sites in carbon materials. Herein, we followed the transformation and evolution of surface oxygen functional groups of various oxidized carbon materials during thermal treatment under an inert atmosphere using various analytical techniques and ab initio molecular dynamics, with the aim of producing stabilized localized electronic states from condensation reactions. Synchrotron-based in situ XPS analyses show a decrease in the number of carboxylic surface groups with a concomitant increase in the number of defect sites upon defunctionalization, which is expected from condensation reactions. Echo-detected field-swept EPR spectra show the apparition of a signal only upon defunctionalization, particularly for samples showing a high proportion of prismatic surface. The contribution of these electronically unsaturated carbon sites to the catalytic activity for the catalytic oxidative dehydrogenation of indoline is moderate, and the surface oxygen functional groups are the main active sites.

  • A Robust C 3 -Symmetric Aluminate Hydride for CO 2 Hydroboration Catalysis: Mechanistic Insights and Countercation Influence on Catalytic Performance

    Yuri C. A. Sokolovicz, Frédéric Hild, Satawat Tongdee, Christophe Gourlaouen, João dos Santos, Henri Schrekker, Samuel Dagorne
    Inorganic Chemistry, 2025, 64 (4), pp.2096-2105. ⟨10.1021/acs.inorgchem.4c05070⟩ | Publiée le 23 janvier 2025
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    The present study details the synthesis and characterization of a robust, monomeric Al-H aluminate supported by a tridentate tris-phenolate ligand, isolated as [2][Li(THF)4] and [2][N( n Bu)4] salts, which were then exploited as CO2 hydroboration catalysts. As initial reactivity studies, it was observed that the nucleophilic Al-H anion in [2][C] (C = counter cation [Li(THF)4] + or [N( n Bu)4] + ) reacts fast with CO2, to afford the corresponding Al formate complexes [3][C], which were isolated and structurally characterized. Such anions were then exploited as potential CO2 reduction catalysts. Salts [2-3][N( n Bu)4] are efficient and robust CO2 hydroboration catalysts in the presence of pinBH or Me2S-BH3 as hydroborane sources to selectively afford formate-equivalent or methanol-equivalent products (TON up 1920), depending on reaction conditions and the nature of the counter-cation. As deduced from detailed DFT calculations, the Al formate anion [3] -acts as a nucleophilic catalyst (for borane activation) but also as an electrophile (through the AlOCO carbon) allowing CO2 activation/functionalization and thus the reduction catalysis to occur, a process thermodynamically driven by the stability of the reduction products. The anionic nature of [2] -and [3] -aluminates, resulting in an enhanced nucleophilicity (vs. neutral analogues), may thus be crucial for catalytic activity. In contrast, according to DFT calculations performed with a model anion of [3] -and pinBH, a CO2 reduction processing via an Al-O/B-H s-bond metathesis appears kinetically unfavored. The proposed mechanism involving an electrophilic/nucleophilic dual activation mode also rationalizes the importance of countercation [C] + in [2-3][C] for catalytic activity and selectivity, as demonstrated by the higher performance of [2][N( n Bu)4] vs. [2][Li(THF)4].

  • Platinum(ii) and ruthenium(ii) coordination complexes equipped with an anchoring site for binding the protein kinase enzyme pockets: synthesis, molecular docking and biological assays

    Matthieu Scarpi-Luttenauer, Katia Galentino, Christophe Orvain, Audrey Fluck, Marco Cecchini, Georg Mellitzer, Christian Gaiddon, Pierre Mobian
    Dalton Transactions, 2025, 54 (20), pp.8270 - 8286. ⟨10.1039/d4dt02984d⟩ | Publiée le 21 janvier 2025
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    To mimic the structural aspects of staurosporine, a potent but unspecific kinase inhibitor, several coordination compounds based on two readily available diimine ligands containing hydrogen bonding donor/acceptor sites (NH-CO fragment) have been designed and synthesized. These complexes are constructed around Ru(II) and Pt(II) metal centers. A total of 9 compounds, named Ru(1)-(5) and Pt(1)-(4), were obtained through straightforward synthetic approaches. The cytotoxicity of the compounds was evaluated on AGS gastric cancer cells (GC) through standard MTT assays. All ruthenium and platinum complexes with low toxicity, i.e.Ru(3), Ru(5), Pt(3) and Pt(4), were docked in the ATP binding pocket of two protein kinases (S6K1 and MST2). The docking scores highlighted a preferred affinity of Ru(5) for the MST2 binding pocket, whereas the platinum compounds are predicted to bind stronger to the S6K1 binding site. Inhibitory activity of the metal complexes on the MST2 and S6K1 signaling pathways was evaluated by analyzing via western blot experiments the phosphorylation state of YAP, a downstream component of the Hippo pathway and the protein expression of S6 and its phosphorylated analogue p-S6. A clear difference of behavior between the Pt(II) and the Ru(II) complexes depending on the type of kinase was observed.

  • Reversible chemical modifications of graphene oxide for enhanced viral capture and release in water

    Pilar Ferré-Pujol, Seiji Obata, Jésus Raya, Alberto Bianco, Hiroyuki Katayama, Takashi Kato, Yuta Nishina
    Carbon, 2025, 234, pp.120015. ⟨10.1016/j.carbon.2025.120015⟩ | Publiée le 13 janvier 2025
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    Detecting low concentrations of viruses in sewage water is crucial for monitoring the spread of emerging viral diseases. However, current detection methods, which involve concentrating viruses using traditional materials such as gauze or cotton, have limitations in effectively accomplishing this task. This study demonstrates that graphene oxide (GO), a two-dimensional carbon material, possesses strong viral adsorption capabilities. However, it lacks efficiency for effective viral release. Therefore, we designed a series of new GO-based materials, which exhibited a viral adsorption similar to pristine GO, while significantly enhancing their release performance by attaching alkyl chains and hydrophilic functional groups. Among the synthesized materials, 1,8-aminooctanol grafted to GO (GO-NH 2 C 8 OH) has emerged as the most promising candidate, achieving a viral release rate higher than 50 %. This superior performance can be attributed to the synergistic effect of the alkyl chain and the terminal OH group, which enhances both its affinity for viruses and water dispersibility. Furthermore, we have successfully applied GO-NH 2 C 8 OH in a new protocol for concentrating viruses from sewage wastewater. This approach has demonstrated a 200-fold increase in virus concentration, allowing PCR detection of this type of pathogens present in wastewater below the detection limit by direct analysis, underscoring its significant potential for virus surveillance.

  • Comparative Structural and Biophysical Investigation of Lycosa erythrognatha Toxin I (LyeTx I) and Its Analog LyeTx I-b

    Amanda Neves de Souza, Gabriele de Azevedo Cardoso, Lúcio Otávio Nunes, Christopher Aisenbrey, Evgeniy Salnikov, Kelton Rodrigues de Souza, Ahmad Saad, Maria Elena de Lima, Jarbas Magalhães Resende, Burkhard Bechinger, Rodrigo Moreira Verly
    Antibiotics, 2025, 14 (1), pp.66. ⟨10.3390/antibiotics14010000⟩ | Publiée le 10 janvier 2025
    Article dans une revue

    Background/Objectives: This study investigates the structural and biophysical properties of the wild-type antimicrobial peptide LyeTx I, isolated from the venom of the spider Lycosa erythrognatha, and its analog LyeTx I-b, designed to enhance antibacterial activity, selectivity, and membrane interactions by the acetylation and increased amphipathicty. Methods: To understand the mechanisms behind these enhanced properties, comparative analyses of the structural, topological, biophysical, and thermodynamic aspects of the interactions between each peptide and phospholipid bilayers were evaluated. Both peptides were isotopically labeled with 2 H 3 -Ala and 15 N-Leu to facilitate structural studies via NMR spectroscopy. Results: Circular dichroism and solid-state NMR analyses revealed that, while both peptides adopt α-helical conformations in membrane mimetic environments, LyeTx I-b exhibits a more amphipathic and extended helical structure, which correlates with its enhanced membrane interaction. The thermodynamic properties of the peptide-membrane interactions were quantitatively evaluated in the presence of phospholipid bilayers using ITC and DSC, highlighting a greater propensity of LyeTx I-b to disrupt lipid vesicles. Calcein release studies reveal that both peptides cause vesicle disruption, although DLS measurements indicate distinct effects on phospholipid vesicle organization. While LyeTx I-b permeabilizes anionic membrane retaining the vesicle integrity, LyeTx I promotes significant vesicle agglutination. Furthermore, DSC and calcein release assays indicate that LyeTx I-b exhibits significantly lower cytotoxicity toward eukaryotic membranes compared to LyeTx I, suggesting greater selectivity for bacterial membranes. Conclusions: Our findings provide insights into the structural and functional modifications that enhance the antimicrobial and therapeutic potential of LyeTx I-b, offering valuable guidance for the design of novel peptides targeting resistant bacterial infections and cancer.

  • Photoresponsive Coordination Polymer Single Crystal Platforms: Design and Applications

    Qi Liu, Pierre Braunstein, Jian-Ping Lang
    Accounts of Materials Research, 2025, 6 (2), pp.183 - 194. ⟨10.1021/accountsmr.4c00325⟩ | Publiée le 9 janvier 2025
    Article dans une revue

    The concept of photoresponsive coordination polymer (CP) single crystal platforms (CPSCPs) is based on photoresponsive olefin CP single crystals, which can undergo photocycloaddition reactions under light irradiation through a single-crystal-to-single-crystal (SCSC) transformation. Taking advantage of the coordination of olefin ligands to metal ions of Zn 2+ , Cd 2+ , etc., a pair of C�C double bonds is positioned adjacent to each other in space at a suitable distance and orientation to allow [2 + 2] photocycloaddition triggered by UVvis irradiation, affording cyclobutanes in the CPs. The single crystal nature of CPs allows their structures to be determined by X-ray diffraction, providing details of the arrangements in space of the C�C double bonds. These CPs are promising platforms for the synthesis of organic molecules, such as cyclobutanes and derivatives, with high regioselectivity and stereoselectivity without any catalyst. The [2 + 2] photocycloaddition reactions may induce structural modifications like expansion or shrinking of unit cells, resulting in macroscopic changes (e.g., cracking, bending, etc.) of the whole CP single crystals and leading to changes in chemical and physical properties. Applications take advantage of their optical properties, including luminescence and absorption, and allow the detection of guest molecules and photomechanical motions. Although much effort has been devoted to such studies, it remains challenging to develop systematic investigations aiming at increasing the diversity of CPs and properties to meet practical needs. Moreover, more efficient methods are desirable to investigate the reaction mechanisms in the solid state and monitor the structural changes occurring during the process. In this Account, we introduce our research on the design and applications of photoresponsive CPSCPs. It is divided into three parts. First, the design and construction of various CPs with different olefin ligands are discussed. Through a suitable and sometimes sophisticated choice of metal ions and auxiliary carboxylate ligands, these olefin ligands meet the requirements to undergo [2 + 2] photocycloaddition reactions in CP structures, allowing for the precise synthesis of cyclobutanes and their derivatives. These compounds could be subsequently extracted from the CPs to give pure organic products. Second, we introduce new strategies, such as a combination of single crystal X-ray diffraction (SCXRD) with thermal/phototreatments of CPs and in situ fluorescence spectroscopy, to monitor the structural changes occurring on the olefin ligands during the reaction. Furthermore, the fast stepwise photoreaction could also be visualized with high resolution. These data significantly strengthen our understanding of solid-state [2 + 2] photocycloaddition reactions in CPs. Third, applications of photoresponsive CPs are described, which focus on optical and photoinduced mechanical properties. Considering the optical properties, the conjugated structures of the olefin ligands change during the reactions, and circular dichroism (CD) and fluorescence were used for their detection and imaging. Furthermore, the photoinduced mechanical properties of CPs could be significantly expanded through the combination of CP crystals with polymers. Lastly, we point out the challenges and directions for future research in the field. We hope this Account will provide an overview of research on photoresponsive CPSCPs, attract more attention from the community, and inspire future research.

  • Bilayer-Forming Lipids Enhance Archaeal Monolayer Membrane Stability

    Margot Saracco, Philippe Schaeffer, Maxime Tourte, Sonja-Verena Albers, Yoann Louis, Judith Peters, Bruno Demé, Stephane Fontanay, Philippe M Oger
    International Journal of Molecular Sciences, 2025, 26 (7), pp.3045. ⟨10.3390/ijms26073045⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Archaeal membranes exhibit remarkable stability under extreme environmental conditions, a feature attributed to their unique lipid composition. While it is widely accepted that tetraether lipids confer structural integrity by forming monolayers, the role of bilayer-forming diether lipids in membrane stability remains unclear. Here, we demonstrate that incorporating diethers into archaeal-like lipid assemblies enhances membrane organization and adaptability under thermal stress. Using neutron diffraction, we show that membranes composed of mixed diethers and tetraethers exhibit greater structural order and stability compared to pure lipid systems. Contrary to expectations, monolayerforming tetraethers alone display increased variability in lamellar spacing under fluctuating temperature and humidity, whereas mixed lipid membranes maintain a consistent architecture. Furthermore, neutron-scattering length density profiles reveal an unexpected density feature at the bilayer midplane, challenging conventional models of archaeal monolayer organization. These findings suggest that molecular diversity of lipid molecules, rather than tetraether dominance, plays a critical role in membrane auto-assembly, stability, and adaptability. Our results provide new insights into archaeal membrane adaptation strategies, with implications for the development of bioinspired, robust synthetic membranes for industrial and biomedical applications.

  • Guanidinium‐Stapled Helical Peptides for Targeting Protein‐Protein Interactions

    Camille Perdriau, Anaïs Luton, Katharina Zimmeter, Maxime Neuville, Claire Saragaglia, Carole Peluso-Iltis, Judit Osz, Brice Kauffmann, Gavin Collie, Natacha Rochel, Gilles Guichard, Morgane Pasco
    Angewandte Chemie International Edition, 2025, 64 (5), pp.e202416348. ⟨10.1002/anie.202416348⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Peptide stapling has emerged as a versatile approach in drug discovery to reinforce secondary structure elements especially α‐helices and improve properties of linear bioactive peptides. Inspired by the prevalence of arginine in protein‐protein and protein‐DNA interfaces, we investigated guanidinium‐stapling as a means to constrain helical peptides. Guanidinium stapling was readily achieved on solid support, utilizing two orthogonally protected lysine or unatural α‐amino acid residues with an amino function. This method allows for easy modulation of the nature and size of the staple as well as helix propensity. Evaluating a set of guanidinium‐stapled peptides for their interaction with different protein targets identified several binders with increased target affinity. X‐ray structure determination of four complexes revealed that all stapled peptides adopt a helical conformation upon protein binding. Notably, the disubstituted guanidinium generally exhibits a distinct cis / trans conformation and, in one instance, retains a conserved hydrogen bond with the protein surface. By identifying, for the first time, the guanidinium moiety as an effective helical peptide stapling group, this research significantly expands the repertoire of α‐helix stapling techniques for the creation of useful protein mimics.

  • Merging Enantioselective Lewis Base Organocatalysis and Gold(I) Catalysis: A One-Pot Access to Chiral-Fused Polycyclic Compounds

    Rémi Pereira, Pierre Locquet, Aurélien Blanc, Fabienne E Grellepois, Emmanuel Riguet
    Journal of Organic Chemistry, 2025, 90 (9), pp.3475-3479. ⟨10.1021/acs.joc.5c00051⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Reported herein is a route to functionalized chiral heteroaromatic polycyclic compounds leveraging two unfriendly catalytic cycles in a one-pot sequential process. α-Heteroaromatic-γ-butyrolactones were engaged in a highly regio-, diastereo-and enantioselective Lewis base Asymmetric Allylic Alkylation (AAA) with alkyne functionalized Morita-Baylis-Hillman (MBH) carbonates. Gratefully to the low Lewis base catalyst loading, subsequent gold catalyzed Friedel-Crafts type cyclization, entailing the formation of fused polycyclic compounds, proceeded efficiently affording structurally complex highly enantioenriched products.

  • Cross‐Linking Mass Spectrometry of the Antimicrobial Peptides Magainin 2 and PGLa Reveals Heterodimerization in Micellar Medium

    Emilie Hirschler, Elise Glattard, Nicolas Arnaud, Johana Chicher, Philippe Hammann, Emmanuelle Leize‐wagner, Burkhard Bechinger, Noelle Potier
    Rapid Communications in Mass Spectrometry, In press, ⟨10.1002/rcm.10044⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Rationale: In this study, we applied cross-linking mass spectrometry (XL-MS) to characterize the oligomeric states of a PGLa/magainin 2 mixture and gain insight into the heterodimerization previously suggested in the literature. Both peptides have shown a synergistic enhancement of activity when tested in antimicrobial assays; however, the mechanism of action is still not well understood. Methods: Peptides solutions were prepared in HEPES buffer in the presence of membrane-mimicking DDM detergent micelles or POPE:POPG 3:1 vesicles. Cross-linking experiments were performed using disuccinimidyl suberate (DSS) or disuccinimidyl glutarate (DSG), and MALDI-MS was used to follow the cross-linking performance. Nano liquid chromatography coupled to mass spectrometry was conducted on a Q Exactive Plus orbitrap to achieve linkage sites determination using pLink2 for data interpretation. Trypsin or pepsin digestion was performed for the characterization of intermolecular links. Results: XL-MS performed in a DDM micelle environment provided direct evidence of a specific PGLa/magainin 2 heterodimer, but no other oligomeric states were detected. Monitoring the reaction using MALDI-MS allowed unambiguous characterization of the cross-linked stabilized oligomers and facilitated a rapid optimization of conditions to achieve the best balance between stabilizing complex formation and avoiding unspecific aggregation. Comparison of the cross-linked species in detergent micelles and lipidic POPE:POPG bilayers revealed different behaviors suggesting that interaction between the peptides might occur differently in both membrane-mimicking media. Conclusions: This study revealed that XL-MS was relevant at the peptidomic level. However, the cross-linking workflow had to be adjusted compared to its use in large-scale protein–protein interaction mapping in order to avoid technical bias arising from the rapid nature of the cross-linking reaction.

  • Permethylated Cyclodextrins with Thiol Groups as Stabilizing Agents for Catalytic Water‐Soluble Platinum Nanoparticles

    Nataliia Marchenko, Sebastian Jung, Adeline Pham, Geordie Creste, Mucahit Aygün, Jérôme Esvan, Yannick Coppel, Piet W. N. M. van Leeuwen, Dominique Armspach, Simon Tricard
    European Journal of Inorganic Chemistry, 2025, 28 (8), pp.e202400776. ⟨10.1002/EJIC.202400776⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    In this study, water‐soluble colloidal platinum nanoparticles (Pt NPs) have been stabilized with novel thiolated cyclodextrins (CD‐SH) and their catalytic performance has been investigated. We varied the size of the CD cycle (α‐CD/β‐CD), the degree of thiolation (one or two thiol groups per CD), and the CD/Pt molar ratio (0.5; 0.2; 0.1; 0.05) to find the best performing water‐soluble, air‐stable hydrogenation catalyst. An organometallic approach for the Pt NP synthesis resulted in the formation of small well‐dispersed NPs of 1–2 nm in size, as shown by TEM. XPS analysis confirmed the formation of a Pt−S interaction, rationalizing the strong NP stabilization by a small quantity of CD‐SH, while preserving the NP catalytic properties. Only 0.1 equivalent of CD‐SH was enough to obtain a promising hydrogenation activity with preserved stability of the colloidal dispersion. Performing catalysis in biphasic conditions allowed simple separation of the products and reuse of the catalyst five times without deactivation.

  • Ab Initio Polaritonic Chemistry on Diverse Quantum Computing Platforms: Qubit, Qudit, and Hybrid Qubit-Qumode Architectures

    Even Chiari, Wafa Makhlouf, Lucie Pepe, Emiel Koridon, Johanna Klein, Bruno Senjean, Benjamin Lasorne, Saad Yalouz
    Physical Review A, 2025, 21 (11), pp.5457-5480. ⟨10.48550/arXiv.2506.12504⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Trying to export ab initio polaritonic chemistry onto emerging quantum computers raises fundamental questions. A central one is how to efficiently represent both fermionic and bosonic degrees of freedom on the same platform, in order to develop computational strategies that can accurately capture strong electron-photon correlations at a reasonable cost for implementation on near-term hardware. Given the hybrid fermion-boson nature of polaritonic problem, one may legitimately ask: should we rely exclusively on conventional qubit-based platforms, or consider alternative computational paradigms? To explore this, we investigate in this work three strategies: qubit-based, qudit-based, and hybrid qubit-qumode approaches. For each platform, we design compact, physically motivated quantum circuit ansätze and integrate them within the state-averaged variational quantum eigensolver to compute multiple polaritonic eigenstates simultaneously. A key element of our approach is the development of compact electron-photon entangling circuits, tailored to the native capabilities and limitations of each hardware architecture. We benchmark all three strategies on a cavity-embedded H$_{2}$ molecule, reproducing characteristic phenomena such as light-induced avoided crossings. Our results show that each platform achieves comparable accuracy in predicting polaritonic eigen-energies and eigenstates. However, with respect to quantum resources required the hybrid qubit-qumode approach offers the most favorable tradeoff between resource efficiency and accuracy, followed closely by the qudit-based method. Both of which outperform the conventional qubit-based strategy. Our work presents a hardware-conscious comparison of quantum encoding strategies for polaritonic systems and highlights the potential of higher-dimensional quantum platforms to simulate complex light-matter systems.

  • Resonance Raman Spectroscopic Study of the Unusual [4Fe‐4S]2+ Cluster of IspH, the Last Enzyme of the Methylerythritol Phosphate Pathway for Terpenoid Biosynthesis

    Hannah Jobelius, Philippe Chaignon, Gabriella I Bianchino, Joanna Wandzig, Petra Hellwig, Myriam Seemann, Frederic Melin
    ChemBioChem, In press, ⟨10.1002/cbic.202500428⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    IspH is the last enzyme of the methylerythritol phosphate pathway. It catalyzes the reductive dehydroxylation of ( E )‐4‐hydroxy‐3‐methyl‐but‐2‐en‐1‐yl diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), which are precursors for the biosynthesis of terpenoids, essential molecules for the survival of all living organisms. This pathway is absent in humans, making it a promising target for drug discovery. Escherichia coli IspH harbors an unusual [4Fe‐4S]<sup>2+</sup> cluster linked to three conserved cysteines with a unique iron site proposed to be coordinated to three water molecules. Here, the first resonance Raman spectroscopic study of the cluster of IspH in the 2+ oxidation state is reported. Using isotopic labeling with <sup>2</sup>H<sub>2</sub>O and H<sub>2</sub><sup>18</sup>O, the bands of the cluster that are sensitive to water coordination or hydrogen bonding are identified. The change of geometry of the cluster upon binding of the substrate, an alkyne diphosphate inhibitor, and the two enzyme products is also analyzed. Distinct binding modes to the cluster may indeed be at the origin of the different distribution of IPP and DMAPP observed during catalysis.

  • Hopanoid breakdown products (HBPs) and their influence on tetracyclic and tricyclic terpane (cheilanthane) oil-source rock parameters

    Tharika Liyanage, Lennart M van Maldegem, Janet Hope, Philippe Schaeffer, Pierre Adam, Hans Peter Nytoft, Dianne Edwards, Jochen Brocks
    Organic Geochemistry, 2025, 210, pp.105085. ⟨10.1016/j.orggeochem.2025.105085⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Tricyclic and tetracyclic terpane ratios are used as biomarker proxies for depositional environments and to classify crude oils and source rocks. However, the biological precursors and diagenetic drivers of these proxies are not well understood. This study reports on the discovery of tricyclic and tetracyclic breakdown products of pentacyclic hopanoids that co-elute with 14α-C<sub>19</sub> and βα-C<sub>20</sub>-C<sub>22</sub> cheilanthanes and C<sub>24</sub> tetracyclic terpane in gas chromatograms. This includes hopanoid breakdown products (HBPs) that are identical to 14α-C<sub>19</sub> cheilanthane and C<sub>24</sub> tetracyclic terpane, biomarkers that are commonly used as indicators of terrigenous organic matter in source rocks and their derived hydrocarbon products. These HBPs were generated by pyrolysis of C<sub>30</sub> diplopterol, a common compound found in the cell membranes of almost all hopanoid-producing bacteria, some lichens and higher plants. HBPs are common in rock-extracted bitumens and crude oils from the Neoproterozoic to the Cenozoic and across a wide range of thermal maturities. Comparison of the relative abundance of HBPs and cheilanthanes against commonly used tricyclic and tetracyclic terpane parameters shows that HBPs can drive or strongly influence terpane-based paleoenvironmental proxies. This study begins to rationalise why some of these parameters indicate specific depositional environments and proposes new ratios that quantify the impact of HBPs on biomarker proxies.

  • Continuous production of gold nanoparticles: towards an industrial production

    Mélanie Romain, Dorra Ben Elkadhi, Mélanie François, Emma Brunin, Michaële Herbst, Arnaud Ponche, Frédéric Demoisson, Lionel Maurizi
    Reaction Chemistry & Engineering, In press, ⟨10.1039/D5RE00350D⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Gold nanoparticles (AuNPs) have gained significant attention for their applications in catalysis, sensing, electronics, diagnostics and therapeutics, necessitating scalable and reproducible production methods. Currently established protocols of AuNPs synthesis restrict up-scalability, and thus prevent its industrialization into biomedical fields that could otherwise exploit their ground-breaking assets. This study explores a continuous hydrothermal process for the synthesis of AuNPs using gold trihydroxide (Au(OH)₃) as a chloride-free precursor, compatible with a lab-made industrial-grade equipment. Batch synthesis was first used to determine optimal reaction conditions based on the Turkevich-Frens method, employing trisodium citrate as a reducing agent. These conditions were adapted to a continuous setup operating at high pressure (250 bar) and variable temperatures (100°C-400°C). Under high pressure, well-dispersed AuNPs with different sizes and morphologies were successfully synthesized. Characterizations of sizes, shapes and localized surface plasmon resonance confirmed successful particle formation, and provided information about dispersion state and optical properties. The system enabled steady AuNPs production with minimal loss, demonstrating a promising route for scalable and controlled AuNPs synthesis suitable for biomedical applications.

  • When Metal Complexes Evolve, and a Minor Species Is the Most Active: the Case of Bis(Phenanthroline)Copper in the Catalysis of Glutathione Oxidation and Hydroxyl Radical Generation

    Enrico Falcone, Vincenzo Vigna, Hemma Schueffl, Francesco Stellato, Bertrand Vileno, Merwan Bouraguba, Gloria Mazzone, Olivier Proux, Silvia Morante, Petra Heffeter, Emilia Sicilia, Peter Faller
    Angewandte Chemie International Edition, 2025, 64 (2), pp.e202414652. ⟨10.1002/anie.202414652⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Several copper-ligands, including 1,10-phenanthroline (Phen), have been investigated for anticancer purposes based on their capacity to bind excess copper (Cu) in cancer tissues and form redox active complexes able to catalyse the formation of reactive oxygen species (ROS), ultimately leading to oxidative stress and cell death. Glutathione (GSH) is a critical compound as it is highly concentrated intracellularly and can reduce and dissociate copper(II) from the ligand forming poorly redox-active copper(I)-thiolate clusters. Here we report that Cu-Phen2 speciation evolves in physiologically relevant GSH concentrations. Experimental and computational experiments suggest that at pH 7.4 mostly copper(I)-GSH clusters are formed, but a minor species of copper(I) bound to one Phen and forming ternary complexes with GSH (GS-Cu-Phen) is the redox active species, oxidizing quite efficiently GSH to GSSG and forming HO• radicals. This minor active species becomes more populated at lower pH, such as typical lysosomal pH 5, resulting in faster GSH oxidation and HO• production. Consistently, cell culture studies showed lower toxicity of Cu-Phen2 upon inhibition of lysosomal acidification. Overall, this study underscores that sub-cellular localisation can considerably influence the speciation of Cu-based drugs and that minor species can be the most redox- and biologically- active.

  • Insight into copper coordination in O2 reduction by water-soluble cytochrome c oxidase models

    Mathilde Berthe, Corinne Boudon, Nolwenn Le Breton, Hiroaki Kitagishi, Koji Oohora, Takashi Hayashi, Jennifer A Wytko, Jean Weiss
    Dalton Transactions, 2025, 54 (9), pp.3659 - 3666. ⟨10.1039/d4dt03188a⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Iron-copper complexes have been extensively studied in the search for efficient cytochrome c oxidase models. Whereas most dinuclear materials usually focus on fine-tuning the coordination of heme-Fe, this work shows that the coordination of copper in cytochrome c oxidase models should be carefully taken into consideration. A β-cyclodextrin dimer was built around a bipyridine linker and combined with Fetetraphenylsulfonatoporphyrinate (FeTPPS) to generate a self-assembled hydrosoluble cytochrome c oxidase model. Cyclic voltammetry and rotating ring disk electrode experiments showed that this model with a tetrahedral coordination of copper(I) is efficient for the reduction of molecular oxygen with an average of 3.6 electrons indicating a preference and efficiency for the four-electron reduction to water.

  • Chiral N‐Alkylfluorenyl‐Substituted N‐Heterocyclic Carbenes in the Gold(I)‐Catalyzed Enantioselective Cycloisomerization of 1,6‐Enynes

    Robin Heinrich, Giovany Marie-Rose, Christophe Gourlaouen, Patrick Pale, Eric Brenner, Aurélien Blanc
    Chemistry - A European Journal, 2025, 31 (19), pp.e202404446. ⟨10.1002/chem.202404446⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    A series of chiral <sup>A*</sup>Flu‐NHC‐gold(I) complexes, where <sup>A*</sup>Flu‐NHC is an N‐heterocyclic carbene (imidazolin‐2‐ylidene or benzimidazolin‐2‐ylidene) bearing a chiral 9‐alkyl‐9‐fluorenyl N‐substituent and a 2,6‐diisopropylphenyl or benzyl N’‐substituent, were straightforwardly prepared in few steps from readily available 2,6‐diisopropylamine, imidazole or benzimidazole. The chirality of the N‐substituent lies in the presence of a chiral alcoholic alkyl chain on the fluorenyl, which results from the opening of commercially available chiral styrene oxide, yielding to a 2‐hydroxy‐2‐phenylethyl or a 2‐hydroxy‐1‐phenylethyl group. Four [AuCl(<sup>A*</sup>Flu‐NHC)] complexes were tested as precatalysts in an enantioselective cycloisomerization of a 1,6‐enyne. Notably, the best inductions were observed with the benzimidazolin‐2‐ylidene derivative bearing a 2‐hydroxy‐1‐phenylethyl group on the fluorenyl ring, showing that a constrained rotation around the N−C fluorenyl bond and a chiral center in α position of the fluorenyl ring are determining factors. Interestingly, a strong improvement of the induction with up to 72 % ee was observed using AgOTf as activator. The presence of a hydrogen bond between the hydroxyl group and OTf − in the in situ generated active cationic gold(I) species probably stiffens its structure. This type of ligand‐counteranion interaction represents a novel strategy for optimizing chirality transfer in asymmetric gold(I) catalysis.

  • Unlocking Catalysis Using Oxidatively Induced Reductive Elimination

    Carmen Antuña-Hörlein, Jean-Pierre Djukic
    Chemistry - A European Journal, In press, ⟨10.1002/chem.202404341⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Oxidatively induced reductive elimination (OIRE) has become a crucial chemical process to enable the effective formation of otherwise much less accessible products. The chemically, electrochemically, or photochemically triggered oxidation of appropriate metal complexes leading to a reductive elimination process otherwise chemically unfavorable has long been studied in stoichiometric metal‐centered reactions. However, its conscious inclusion and targeted application in catalysis is a rather recent development. Ruthenium and Group 9 metal complexes are particularly representative examples of how the observed OIRE abilities can be modulated using different coupling partners. Parallels can be drawn between rhodium and iridium, which have a long history as efficient catalysts, and their more readily available 3d row metal neighbor, i.e. cobalt, with ruthenium also providing a parallel reactivity. This review explores the history of OIRE reactions throughout the last few centuries, highlighting the role of Ti, Mo, Fe, Ru, Ni, Hg and group 9 transition metals as key players in C‐H bond functionalization and OIRE chemistry, discussing the most relevant studies published in the field whilst pinpointing research gaps that require new theoretical and mechanistic studies, with the final goal of unlocking the full potential of OIRE chemistry in organometallic homogeneous catalysis.

  • Wavelength-Controlled Stepwise Photocycloaddition Reactions and Photomechanical Motions of a Cd(II) Complex

    Qiaoqiao Zhang, Yong Wang, Xin-Yi Huang, Qi Liu, Pierre Braunstein, Jian-Ping Lang
    CCS Chemistry, In press, ⟨10.31635/ccschem.025.202505532⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Photomechanical crystals, capable of transforming light energy into mechanical work, hold significant promise for applications in intelligent actuating devices, artificial muscles, and microrobots, but this calls for more research on the influence of irradiation wavelengths. Here we report a discrete Cd(II)based complex [Cd 2 (CH 2 OH-1,3-bpeb) 4 (3,5-FBA) 4 ] (1; CH 2 OH-1,3-bpeb = 5-hydroxymethyl-1,3-bis((E)-2-(pyridin-4-yl)vinyl)benzene, 3,5-FBA = 3,5-difluorobenzoate) which undergoes stepwise [2 + 2] photocycloaddition reactions under visible and ultraviolet light, forming mono-and di-cyclobutane products, respectively, through a single-crystal-to-singlecrystal transformation. This wavelength-controlled process involved the cleavage and subsequent reconstruction of Cd-O bonds within the crystal framework, along with the corresponding lattice contraction and expansion. Those photochemical reactions at different wavelengths initiate various crystal motions, which stem from the stress within the unit cell caused by anisotropic contraction/ expansion. This work opens a new avenue for regulating wavelengths to achieve photocontrolled structural transformations and macroscopic photomechanical motions of molecular crystals.

  • Topochemical silanization of the Aurivillius phase Bi2SrTa2O9 and post-synthesis complexation

    Pacôme Chapel, Thibaud Henry, Frédéric Payet, Cédric Leuvrey, Fabrice Leroux, Nathalie Parizel, Pierre Rabu, Guillaume Rogez
    Applied Clay Science, 2025, 278, pp.108017. ⟨10.1016/j.clay.2025.108017⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Functionalization of layered oxides to convey a reactive function prone to coordinate metal cations in-between the inorganic layers is a challenge with respect the potential reactivity of the oxides with these groups. Here, silanization by amine-bearing alkoxysilanes was proposed as a convenient way to bring in free amine groups in the interlayer space. Yet, silanization in itself has seldom been explored for layered oxides. This study presents a microwave-assisted multistep approach for functionalizing the Aurivillius Bi<sub>2</sub>SrTa<sub>2</sub>O<sub>9</sub> phase by organosilanes. Three different organosilanes were inserted in the interlayer space, triethoxyoctylsilane, 3-(aminopropyl)triethoxysilane and N-[3(trimethyoxysilyl)propyl]ethylenediamine. The synthetic pathway described here constitutes a fast and efficient approach to silanize the interlayer space of layered perovskites, while preserving the layered structure. The compounds were fully characterized, notably by X-Ray Diffraction (XRD) and solid state Nuclear Magnetic Resonance (NMR), which demonstrated that the organosilanes were effectively grafted onto the oxide layers, forming stable Si-O-Ta bonds, and allowed to precise the grafting scheme, evidencing the very limited formation of siloxane network. Using this approach, free amino groups were introduced in-between the inorganic oxide layers due to the preferential reactivity of the oxide sheets with the alkoxysilane groups compared to amine. These amino groups are available for further coordination by transition metal ions using a post-synthesis complexation reaction. As a proof of concept their complexation ability towards Cu<sup>2+</sup> ions was demonstrated by UltraViolet-Visible (UV-Vis) and Electron Paramagnetic Resonance (EPR) spectroscopies. This soft chemistry strategy constitutes a new versatile, fast and efficient method to introduce transition metal cations into layered oxides and paves the way for the design and synthesis of complex architectures, specifically designed for application, in catalysis, sensors, metal cation remediation or luminescence for instance.

  • Exploring Bioinspired Ln3+ Complexes for Cu2+ Detection: Design and Efficacy as MRI Contrast Agents

    Martina Sanadar, Katharina Zimmeter, Harlei Martin, Agnès Pallier, Bertrand Vileno, Peter Faller, Angélique Sour, Célia Bonnet
    European Journal of Inorganic Chemistry, 2025, 28 (13), pp.23067-23076. ⟨10.1002/ejic.202500049⟩ | Publiée le 1 janvier 2025
    Article dans une revue

    Imaging extracellular Cu<sup>2+</sup> in vivo is important due to its role in physiological and pathological processes. Magnetic resonance imaging is a promising modality for this purpose but developing contrast agents selective for Cu<sup>2+</sup> over abundant Zn<sup>2+</sup> ions remains a challenge. We synthesized and characterized two novel ligands, DO3A‐picG and DO3A‐picGH, containing a macrocycle and a pendant arm for Cu<sup>2+</sup> complexation inspired from the ATCUN site of human serum albumin. The corresponding Ln<sup>3+</sup> complexes were studied in the presence and in the absence of Cu<sup>2+</sup> through UV‐visible, fluorescence and EPR spectroscopies, as well as relaxivity measurements. These studies show that Gd‐DO3A‐picG and Gd‐DO3A‐picGH are non‐hydrated complexes, in which the pyridine‐amide moiety remains coordinated to Ln<sup>3+</sup> even in the presence of Cu<sup>2+</sup>. While Gd‐DO3A‐picG does not respond to Cu<sup>2+</sup>, a sizeable relaxivity increase is observed for Gd‐DO3A‐picGH. This increase is attributed to an increased second‐sphere contribution to the relaxivity, i. e. a higher number of H<sub>2</sub>O molecules retained in close proximity to Gd<sup>3+</sup> through H‐bonding. Finally, we show that Gd‐DO3A‐picGH binds Cu<sup>2+</sup> with a μM affinity, and is selective for Cu<sup>2+</sup> vs Zn<sup>2+</sup>.

  • Interplay between Spinmerism and Spin‐Orbit Coupling for a d 2 Metal Ion in an Open‐Shell Ligand Field

    Pablo Roseiro, Ashini Shah, Saad Yalouz, Vincent Robert
    ChemPhysChem, 2024, 26 (6), ⟨10.1002/cphc.202400914⟩ | Publiée le 23 décembre 2024
    Article dans une revue

    Abstract Recent theoretical studies have shown that placing a spin‐crossover ion in a field of radical ligands can induce local superpositions of spin states (see Ref. [1,2]). The stability of this phenomenon, termed spinmerism , is called into question when spin‐orbit coupling is included. Thus, we investigate the competition between spinmerism and spin‐orbit coupling in a d 2 metal ion with two radical ligands. Our results show that competition between spinmerism and spin‐orbit coupling can induce distinct states which may potentially open new avenues for quantum technologies.

  • Unlocking the Aromatic Cope Rearrangement with Gold(I) Catalysis

    Pierre Locquet, Akilan Rajamani, Rémi Pereira, Fabienne Grellepois, Jean-Marc Weibel, Eric Hénon, Emmanuel Riguet, Aurélien Blanc
    ACS Catalysis, 2024, 14 (24), pp.18884. ⟨10.1021/acscatal.4c06662⟩ | Publiée le 12 décembre 2024
    Article dans une revue

    The Aromatic Cope Rearrangement (ArCopeR) is a highly challenging chemical reaction under thermal conditions, primarily attributed to the loss of aromaticity during the initial [3,3]-sigmatropic step of the process. Such rare transformation typically requires high temperatures and specially engineered 1,5-hexadiene scaffolds, making it impractical for straightforward synthesis of new molecules. Here, we demonstrated that gold(I) catalysts significantly lower the energetic barriers associated to ArCopeR, enabling the reaction to be carried out at low temperature (rt to 70°C) in dichloroethane or hexafluoroisopropanol with high yields. Specifically, phosphine gold(I) complex ((p-CF3Ph)3PAuOTf) permits for the diastereoselective and divergent aromatic Cope rearrangement from various α-allyl-α'-heteroaromatic γ-lactone or malonate derivatives, while N-heterocyclic carbene gold(I) (IPrAuNTf2) allows the selective dearomatization reaction. Extended quantum mechanics calculations, consistent with experimental observations, reveal that (i) an interweaved transformation occurs instead of the expected ArCope cascade made of formal [3,3]-sigmatropic rearrangement and [1,3]H-shift steps, and that (ii) van der Waals interactions between the catalyst and substrate contribute to the interrupted ArCope process leading to dearomatize products. This study presents the first catalytic and synthetically useful protocol to promote ArCopeR under mild conditions.

  • CuI-Zeolite Catalysis for Biaryl Synthesis via Homocoupling Reactions of Phenols or Aryl Boronic Acids

    Xiaohui Di, Tony Garnier, Arnaud Clerc, Eliott Jung, Christian Lherbet, Valérie Bénéteau, Patrick Pale, Stefan Chassaing
    Molecules, 2024, 29 (23), pp.5552. ⟨10.3390/molecules29235552⟩ | Publiée le 25 novembre 2024
    Article dans une revue

    Due to the importance of biaryls as natural products, drugs, agrochemicals, dyes, or organic electronic materials, a green alternative biaryl synthesis has been developed based on easy-to-prepare and cheap copper(I)-exchanged zeolite catalysts. CuI-USY proved to efficiently catalyze the direct homocoupling of either phenols or aryl boronic acids under simple and practical conditions. The CuI-USY-catalyzed oxidative homocoupling of phenols could conveniently be performed under air either in warm methanol or water with good to high yields. In methanol, a small amount of Cs2CO3 was required, while none was necessary in water. The homocoupling of aryl boronic acids was best performed also in warm methanol, without an additive. These mild conditions showed good functional-group tolerance, leading to a variety of substituted (hetero)biaryls (28 examples). The heterogeneous CuI-USY catalyst could readily be recovered and reused. Interestingly, the homocoupling of vinyl boronic acids was successfully coupled to a Diels–Alder reaction, even in a one-pot process, allowing access to highly functionalized cyclohexenes.

  • Towards Bacterial Resistance via the Membrane Strategy: Enzymatic, Biophysical and Biomimetic Studies of the Lipid cis-trans Isomerase of Pseudomonas aeruginosa

    Mickaël Mauger, Iryna Makarchuk, Yasmin Molter, Anna Sansone, Frédéric Melin, Philippe Chaignon, Philippe Schaeffer, Pierre Adam, Volker Schünemann, Petra Hellwig, Carla Ferreri, Chryssostomos Chatgilialoglu, Myriam Seemann
    ChemBioChem, 2024, 26 (1), ⟨10.1002/cbic.202400844⟩ | Publiée le 14 novembre 2024
    Article dans une revue

    <div><p>The lipid cis-trans isomerase (Cti) is a periplasmic heme-c enzyme found in several bacteria including Pseudomonas aeruginosa, a pathogen known for causing nosocomial infections. This metalloenzyme catalyzes the cis-trans isomerization of unsaturated fatty acids in order to rapidly modulate membrane fluidity in response to stresses that impede bacterial growth. As a consequence, breakthrough in the elucidation of the mechanism of this metalloenzyme might lead to new strategies to combat bacterial antibiotic resistance. We report the first comprehensive biochemical, electrochemical and spectroscopic characterization of a Cti enzyme. This has been possible by the successful purification of Cti from P. aeruginosa (Pa-Cti) in favorable yields with enzyme activity of 0.41 μmol/ min/mg when tested with palmitoleic acid. Through a synergistic approach involving enzymology, site-directed mutagenesis, Raman spectroscopy, Mössbauer spectroscopy and electrochemistry, we identified the heme coordination and redox state, pinpointing Met163 as the sixth ligand of the Fe II of heme-c in Pa-Cti. Significantly, the development of an innovative assay based on liposomes demonstrated for the first time that Cti catalyzes cis-trans isomerization directly using phospholipids as substrates without the need of protein partners, answering the important question about the substrate of Cti within the bacterial membrane.</p></div>

  • π‐mers and π‐dimers: Two Radical Supramolecular Interactions – A Tutorial Review

    Jean Joseph, Mathilde Berville, Jennifer Wytko, Jean Weiss, Henri‐pierre Jacquot de Rouville
    Chemistry - A European Journal, 2024, 31 (2), pp.e202403115. ⟨10.1002/chem.202403115⟩ | Publiée le 5 novembre 2024
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    Abstract In this review, the difference between π‐mers (pimers) and π‐dimers (pi‐dimers) will be discussed. Often interchanged or confused in the literature, these two radical interactions lead to different or even opposite physico‐chemical behaviors. This review aims at clarifying the terms π‐mers and π‐dimers and at describing their main physico‐chemical properties to address their differences. Finally, selected literature examples exhibiting the successive formation of π‐mers and π‐dimers within the same systems will be detailed to emphasize the physico‐chemical changes occurring upon conversion.

  • Dichloro-bis[(Z)-1-styryl-benzimidazole]-zinc(II)

    Neslihan Şahin, İsmail Özdemir, David Sémeril
    Molbank, 2024, 2024 (4), pp.M1913. ⟨10.3390/M1913⟩ | Publiée le 5 novembre 2024
    Article dans une revue

    We have successfully synthesized the dichloro-bis[(Z)-1-styryl-benzimidazole]-zinc(II) complex, which was fully characterized by IR, elemental analysis, and mass and NMR spectroscopy. The solid-state structure definitively shows that two benzimidazole moieties are coordinated to the zinc atom, which adopts a tetrahedral geometry.

  • Dichloro-Bis(1-cinnamyl-benzimidazole)-Cobalt(II)

    Neslihan Şahin, İsmail Özdemir, David Sémeril
    Molbank, 2024, 2024 (4), pp.M1911. ⟨10.3390/M1911⟩ | Publiée le 31 octobre 2024
    Article dans une revue

    Dichloro-bis(1-cinnamyl-benzimidazole)-cobalt(II) was prepared in one step using a cobalt precursor CoCl2 and corresponding substituted benzimidazole. The complex was fully characterized using IR, elemental analysis, and mass- and NMR spectroscopy. In the solid state, the cobalt atom displays a typical tetrahedral geometry and is coordinated to two chlorine atoms and two benzimidazole moieties.

  • High-fidelity anatomical phantoms for MRI practical training

    Habeeb Yusuff, Pierre-Emmanuel Zorn, Franck Blindauer, Naji Kharouf, David Sémeril, Guillaume Bierry, Stéphane Kremer, Jean-Philippe Dillenseger
    Physica Medica European Journal of Medical Physics, 2024, 127, pp.104832. ⟨10.1016/j.ejmp.2024.104832⟩ | Publiée le 29 octobre 2024
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    <div><p>Practical MRI training is essential for bridging the gap between complex theoretical knowledge and clinical applications. Traditional phantoms used in MRI, such as ACR phantoms, are valuable for illustrating system characterization methods but often lack the anatomical complexity required for realistic training. This study presents the development of high-fidelity anatomical phantoms designed specifically for practical MRI training. These phantoms replicate key anatomical structures and tissue contrasts of the head, offering a more realistic training experience for healthcare students and medical imaging staff (radiologists, physicists, radiographers). Materials and Methods: We focused on the head region, creating phantoms from reference MRI T1-weighted slices and using computer-aided design (CAD) software to design detailed anatomical structures. These phantoms were 3D printed and filled with tissue-mimicking gels. MRI acquisitions were performed using a 1.5T clinical MRI system.</p><p>Results: The resulting images demonstrated high anatomical fidelity and realistic MRI tissue contrasts. The phantoms allow for effective demonstration of the impact of parameter modifications on MRI images and aid in anatomical structure recognition. Conclusion: While technical improvements are needed to ensure long-term stability and accurate relaxometric properties, these phantoms hold significant potential for enhancing MRI education and sequences evaluations. The approach can be extended to other anatomical regions, further supporting the training and optimization of MRI sequences.</p></div>

  • Probing Prismatic/Basal Surfaces of Carbon Materials upon Graphitization by Gas Adsorption, TPD, and XPS

    Mathieu Vidal, Maryam Dehaghani, Takeharu Yoshii, Keigo Wakabayashi, Ignacio Cameán, Mathias Barreau, Nolwenn Le Breton, Iann Gerber, Pascal Puech, Athanassios Boudalis, Thomas Blon, Tobias Placke, Hirotomo Nishihara, Spyridon Zafeiratos, Philippe Serp
    Journal of Physical Chemistry C, 2024, 128 (44), pp.18993-19012. ⟨10.1021/acs.jpcc.4c06100⟩ | Publiée le 25 octobre 2024
    Article dans une revue

    The prismatic and basal plane surfaces of carbon materials dictate most of their anisotropic physicochemical properties. For many applications where interfacial interactions are key, high-temperature treatments are performed to achieve their graphitization. Such treatment changes edge and basal plane configuration, impacting the energetical behavior of the carbon surfaces, particularly for carbon nanomaterials, with consequences for their properties. Therefore, efforts should be devoted to probing the prismatic and basal plane surfaces of such materials to understand their surface properties for the development of high-performance carbon materials. Herein, we investigate the effect of high-temperature graphitization (3073 K) on the structural, textural, chemical, and magnetic properties of graphitic carbon nanomaterials presenting different prismatic/basal surfaces. The evolution of the prismatic/basal surfaces has been probed by nitrogen adsorption, temperature-programmed desorption, and X-ray photoelectron spectroscopy (XPS). Although these three techniques are in agreement for the starting materials, they diverge in the case of materials that have undergone thermal annealing. This is linked in particular to the formation of loops following the heat treatment, which are identified as belonging to the prismatic surface by XPS and modified the N2 adsorptive potentials. Formed small vacancies on closed loops and nonperfect closure of certain loops can contribute to the accumulation of very reactive defects at the loop level. The thermal annealing also has a pronounced influence on the magnetic properties of these materials. Interestingly, we show that a positive correlation exists between the spin density of the annealed graphitic carbons and their prismatic and basal surfaces.

  • A millisecond coarse-grained simulation approach to decipher allosteric cannabinoid binding at the glycine receptor α1

    Alessio Bartocci, Andrea Grazzi, Nour Awad, Pierre-Jean Corringer, Paulo C. T. Souza, Marco Cecchini
    Nature Communications, 2024, 15 (1), pp.9040. ⟨10.1038/s41467-024-53098-4⟩ | Publiée le 19 octobre 2024
    Article dans une revue

    Glycine receptors (GlyR) are regulated by small-molecule binding at several allosteric sites. Cannabinoids like tetrahydrocannabinol (THC) and N-arachidonyl-ethanol-amide (AEA) potentiate the GlyR response but their mechanism of action is not fully established. By combining millisecond coarse-grained (CG) MD simulations powered by Martini 3 with backmapping to all-atom representations, we have characterized the cannabinoid-binding site(s) at the zebrafish GlyR-α1 active state with atomic resolution. Based on hundreds of thousand ligand-binding events, we find that cannabinoids bind to the transmembrane domain of the receptor at both intrasubunit and intersubunit sites. For THC, the intrasubunit binding mode predicted in simulation is in excellent agreement with recent cryo-EM structures, while intersubunit binding recapitulates in full previous mutagenesis experiments. Intriguingly, AEA is predicted to bind at the same intersubunit site despite the strikingly different chemistry. Statistical analyses of the ligand-receptor interactions highlight potentially relevant residues for GlyR potentiation, offering experimentally testable predictions. The predictions for AEA have been validated by electrophysiology recordings of rationally designed mutants. The results highlight the existence of multiple cannabinoid-binding sites for the allosteric regulation of GlyR and put forward an effective strategy for the identification and structural characterization of allosteric binding sites.

  • Quaternized 1,2,3-Triazolyl Content and Modulation Potentiate Antibacterial and Antifungal Activities of Amphipathic Peptoids

    Cassandra Guerinot, Mélodie Malige, Kathakali De, Marc Maresca, Nicolas Charbonnel, Elise Courvoisier-Dezord, Nicolas Vidal, Olivier Roy, Frederic Laurent, Jérôme Josse, Christopher Aisenbrey, Burkhard Bechinger, Christiane Forestier, Sophie Faure
    ACS Infectious Diseases, 2024, 10 (11), pp.3915-3927. ⟨10.1021/acsinfecdis.4c00591⟩ | Publiée le 11 octobre 2024
    Article dans une revue

    Bioinspired from cationic antimicrobial peptides, sequence-defined triazolium-grafted peptoid oligomers (6- to 12-mer) were designed to adopt an amphipathic helical polyproline I-type structure. Their evaluation on a panel of bacterial strains (Escherichia coli, Pseudomonas aeruginosa, Staphylococcus aureus, Enterococcus faecalis), pathogenic fungi (Candida albicans, Cryptococcus neoformans, Aspergillus fumigatus) and human cells (hRBC, BEAS-2B, Caco-2, HaCaT, HepG2) enabled to identify two heptamers with improved activity to selectively fight Staphylococcus aureus pathogens. Modulation of parameters, such as the nature of the triazolium and hydrophobic/lipophilic side chains, the charge content and the sequence length, drastically potentiates activity and selectivity. Besides, the ability to block the pro-inflammatory effect induced by lipopolysaccharide or lipoteichoic acid was also explored. Finally, biophysical studies by circular dichroism and fluorescence spectroscopies strongly supported that the bactericidal effect of these triazolium-grafted oligomers was primarily due to the selective disruption of the bacterial membrane.

  • State-Averaged Orbital-Optimized VQE: A quantum algorithm for the democratic description of ground and excited electronic states

    Martin Beseda, Silvie Illésová, Saad Yalouz, Bruno Senjean
    Journal of Open Source Software, 2024, 9 (101), pp.6036. ⟨10.21105/joss.06036⟩ | Publiée le 26 septembre 2024
    Article dans une revue

    The electronic structure problem is one of the main problems in modern theoretical chemistry. While there are many already-established methods both for the problem itself and its applications like semi-classical or quantum dynamics, it remains a computationally demanding task, effectively limiting the size of solved problems. Fortunately, it seems, that offloading some parts of the computation to Quantum Processing Units may offer significant speed-up, often referred to as quantum supremacy or quantum advantage. Together with the potential advantage, this approach simultaneously presents several problems, most notably naturally occurring quantum decoherence, hereafter denoted as quantum noise and lack of large-scale quantum computers, making it necessary to focus on Noisy-Intermediate Scale Quantum computers when developing algorithms aspiring to near-term applications. SA-OO-VQE package aims to answer both these problems with its hybrid quantum-classical conception based on a typical Variational Quantum Eigensolver approach, as only a part of the algorithm utilizes offload to QPUs and the rest is performed on a classical computer, thus partially avoiding both quantum noise and the lack of quantum bits. The SA-OO-VQE has the ability to treat degenerate (or quasi-degenerate) states on the same footing, thus avoiding known numerical optimization problems arising in state-specific approaches around avoided crossings or conical intersections.

  • Gold(I)-Catalyzed Access to 1-Alkynyl C -Glycosides from 1-Silylated Alkynes: An Alternative Paradigm for the Direct and α-Stereoselective Alkynylation of Glycosides

    Eliot Starck, Mathieu Pascaretti, Catherine Taillier, Aurélien Blanc, Vincent Dalla, Patrick Pale, Jean-Marc Weibel
    ACS Catalysis, 2024, 14 (19), pp.14863-14870. ⟨10.1021/acscatal.4c04293⟩ | Publiée le 23 septembre 2024
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    Analog to O-glycosides, C-glycosides are natural products exhibiting various bioactivities. Alkynyl C-glycosides represent important key intermediates towards more complex derivatives; however, a convenient access through a single catalytic and highly stereocontrolled step remains an important and only partially solved challenge. Here, a mechanistically designed gold(I)-catalyzed silyl-assisted efficient and highly alpha-stereoselective process is reported. The postulated mechanism has been ascertained by combining 1H, 31P and VT NMR and in situ MS experiments.

  • Characterization and analysis of a Commiphora species germinated from an ancient seed suggests a possible connection to a species mentioned in the Bible

    Sarah Sallon, Elaine Solowey, Morgan R Gostel, Markus Egli, Gavin R Flematti, Björn Bohman, Philippe Schaeffer, Pierre Adam, Andrea Weeks
    Communications Biology, 2024, 7 (1), pp.1109. ⟨10.1038/s42003-024-06721-5⟩ | Publiée le 10 septembre 2024
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    A seed recovered during archaeological excavations of a cave in the Judean desert was germinated, with radiocarbon analysis indicating an age of 993 CE– 1202 calCE. DNA sequencing and phylogenetic analysis identified the seedling as belonging to the angiosperm genus Commiphora Jacq., sister to three Southern African Commiphora species, but unique from all other species sampled to date. The germinated seedling was not closely related to Commiphora species commonly harvested for their fragrant oleoresins including Commiphora gileadensis (L.) C.Chr., candidate for the locally extinct “Judean Balsam” or “Balm of Gilead” of antiquity. GC-MS analysis revealed minimal fragrant compounds but abundance of those associated with multi-target bioactivity and a previously undescribed glycolipid compound series. Several hypotheses are offered to explain the origins, implications and ethnobotanical significance of this unknown Commiphora sp., to the best of our knowledge the first identified from an archaeological site in this region, including identification with a resin producing tree mentioned in Biblical sources and possible agricultural relationship with the historic Judean Balsam.

  • Triplet State‐Promoted Kumada‐Corriu Coupling Catalyzed by Hydrotris(3,5‐diisopropylpyrazolyl)boratocobalt(III)diiodide

    Zekun Wang, Yann Cornaton, Jean-Pierre Djukic
    European Journal of Inorganic Chemistry, 2024, pp.e202400420. ⟨10.1002/ejic.202400420⟩ | Publiée le 4 septembre 2024
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    The Kumada‐Corriu hetero‐coupling between an halogeno‐arene and an arylmagnesiumbromide can be catalyzed with yields &gt; 80% by the new hydrotris(3,5‐diisopropylpyrazolyl)boratocobalt(III)diiodide, i.e. TpiPrCoI2. The catalysis, which is significantly improved upon exposure to light as compared to darkness, is determined by the coexistence of low and high spin states in a respective ratio of ~ 3:2 for the crucial “TpiPrCoAr2” intermediate. The pivotal cobalt(I) TpiPrCo(I)(thf)n intermediate is shown to be exclusively a triplet state in the ground state with a measured μeff value of 3.08μB at 293 K in C6D6. DFT investigations confirm the key role of triplet states for the bisaryl‐cobalt(III) intermediates in that they provide a reaction pathway with much lower activation barriers as compared to the singlet state. The low‐to‐high spin state transition in THF enhances the reactivity of the “TpiPrCoAr2” intermediate, which changes its coordination geometry from singlet spin state 18 electron OC‐6 TpiPrCoAr2(thf) to a triplet spin state 16 electron SPY‐5 TpiPrCoAr2 where the TpiPr ligand adopts a nearly κ2 bonding mode. The quantitative Independent Gradient Model analysis of the noncovalent interactions that prefigure the C‐C covalent bond in the key Co(Ar)2 intermediates informs of the peculiar importance of the singlet to triplet spin state transition.

  • Organocatalyse par Liaison Halogène et Chalcogène

    Victor Mamane
    L'Actualité Chimique, 2024, 497, pp.26-29 | Publiée le 2 septembre 2024
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    La nature électrophile des halogènes et chalcogènes se caractérise par l’apparition à la surface de ces atomes d’une zone déficiente en électron, appelée « s-hole », qui leur permet d’interagir de façon non-covalente avec des zones riches en électrons (doublets non liants, électrons p). Si cette interaction implique un halogène électrophile, on parle de « liaison halogène », notée XB. De manière analogue, si c’est un chalcogène électrophile qui est concerné, cette interaction est définie par le terme de « liaison chalcogène », abrégée par ChB. Cet article décrit comment ces deux interactions ont été introduites en organocatalyse non-covalente et les avancées majeures dans la conception d’organocatalyseurs XB et ChB de plus en plus efficaces durant ces dix dernières années.

  • Nellix Device Failure Mechanisms Analysis on Explanted Grafts

    Léna Christ, Salomé Kuntz, Damir Vakhitov, Laurent Raibaut, Nicole Neumann, Frédéric Heim, Nabil Chakfé, Anne-Catherine Lejay
    Journal of endovascular therapy, 2024, ⟨10.1177/15266028241274736⟩ | Publiée le 27 août 2024
    Article dans une revue

    Objective: To understand possible reasons for poor durability of the Nellix (Endologix Inc., Irvine, USA) endovascular aneurysm sealing (EVAS) device. Materials and Methods: 21 Nellix endoprostheses explanted for endoleaks and migration underwent visual examinations of stent structures and instrumental examinations of the polymer endobags on 4 devices. We harvested 2.0-gram polymer slices out of each of them and tested the samples in an in vitro implantation replication that included wet and dry exposures. During the wet phase, we placed samples in a beaker with saline, mimicking the filling of the endobags during implantation. An exposure to a 37°C environment with 60% humidity during the dry phase replicated the postimplantation conditions inside the aneurysmal sac. Results: Iatrogenic defects affected 16 (76%) metal stents and 20 (95%) endobags. The polymer was disintegrated owing to degradation in 15 (71%) cases. The polymer could lose more than 70% of its initial weight when partially dehydrated and regain 80% when placed in saline. We observed volume decrease and polymer fragmentation during these study phases. Conclusions: The polymer can lose weight and volume while it dehydrates. This structural degradation of the polymer could lead to the development of endoleaks and/or migration of the device. Clinical Impact Based on the results of previous investigations, due to possible endovascular device degradation, patients with endografts should be offered life-long surveillance, and the Nellix device is no exception. Herein we suggest polymer degradation as one of the possible reasons for the device failure. Although Nellix has been withdrawn from the market, there are numerous patients with this type of endograft. Due to its unpredictable performance in the medium and long term, these patients should be recommended enhanced life-long surveillance every 6 months. Any suspicious conditions during the follow-up must be taken seriously and explantation should be considered.

  • Self‐Assembled Bis‐Acridinium Tweezer Equilibria Controlled by Multi‐Responsive Properties

    Johnny Hu, Jean‐pierre Launay, Alain Chaumont, Valérie Heitz, Henri‐pierre Jacquot de Rouville
    Chemistry - A European Journal, 2024, 30 (44), ⟨10.1002/chem.202401866⟩ | Publiée le 6 août 2024
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    Abstract Protonated and methylated bis‐acridinium tweezers built around a 2,6‐diphenylpyridyl and an electron enriched 2,6‐di(p‐anisyl)pyridyl spacer have been synthesized. These tweezers can self‐assemble in their corresponding homodimers and the associated thermodynamic parameters have been probed in organic solvents. The switching properties of the tweezers have been exploited in biphasic transfer experiments showing the shift of the equilibria towards the homodimers. Moreover, the thermodynamic parameters of the formation of the reduced methylated homodimers investigated by electrochemical experiments revealed the dissociation of the dimers. Thus, in addition to solvent and temperature, the pH and redox responsiveness of the acridinium units of the tweezers make it possible to modulate to a larger extent the monomer‐dimer equilibria.

  • Nitrite Electroreduction Enhanced by Hybrid Compounds of Keggin Polyoxometalates and 1‐Butyl‐3‐Vinylimidazolium

    Yulin Zhou, Jing Sun, Sébastien Gallet, Jesus Raya, Corinne Boudon, Pierre-Antoine Bonnefont, Laurent Ruhlmann, Vasilica Badets
    ChemCatChem, 2024, ⟨10.1002/cctc.202400226⟩ | Publiée le 5 août 2024
    Article dans une revue

    Abstract We describe here an immobilization method of four Keggin‐type polyoxometalates (POMs) ([H 2 W 12 O 40 ] 6− , [BW 12 O 40 ] 5− [SiW 12 O 40 ] 4− , [PW 12 O 40 ] 3− ) by using the reaction with an ionic liquid, 1‐butyl‐3‐vinylimidazolium (BVIM) bromide. The reaction yields a hybrid material (BVIM‐POM) as a water‐insoluble salt. The chemical structure of both compounds is preserved, as indicated by infrared spectroscopy (FT‐IR), although with a reduced crystallinity (shown by X‐ray diffraction analysis) due to a decrease of water content (shown by thermogravimetric analysis). Cross polarization 1 H‐ 31 P NMR evidenced the presence of BVIM in the structure of (BVIM) 3 [PW 12 O 40 ]. The salt is mixed with carbon powder and Nafion to prepare an ink and casted on glassy carbon electrodes. The electrochemical behavior of immobilized POMs material is preserved. The electrochemical activity for nitrite reduction is measured by cyclic voltammetry and differential electrochemical mass spectrometry (DEMS). It was observed that the reduction current of 10 mM HNO 2 at pH 1 in 0.5 M Na 2 SO 4 is enhanced in the presence of these hybrid materials. DEMS has evidenced the formation of nitrous oxide (N 2 O) at potentials more positive compared to the use of parent POMs in solution.

  • The nicotinic acetylcholine receptor and its pentameric homologues: towards an allosteric mechanism of signal transduction at the atomic level

    Marco Cecchini, Pierre-Jean Corringer, Jean-Pierre Changeux
    Annual Review of Biochemistry, 2024, 93 (1), pp.339-366. ⟨10.1146/annurev-biochem-030122-033116⟩ | Publiée le 2 août 2024
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    The nicotinic acetylcholine receptor has served, since its biochemical identification in the 1970's, as a model of allosteric ligand-gated ion channel mediating signal transition at the synapse. In recent years, the application of X-ray crystallography and high-resolution cryo-electron microscopy together with molecular dynamic simulations to nicotinic receptors and homologs have opened a new era in the understanding of channel gating by the neurotransmitter. They reveal, at atomic resolution, the diversity and flexibility of the multiple ligand-binding sites including recently discovered allosteric modulatory sites distinct from the neurotransmitter orthosteric site and the conformational dynamics of the activation process as a molecular switch linking together these multiple sites. The model emerging from these studies paves the way to a new pharmacology based, first, upon the occurrence of an original mode of indirect allosteric modulation, distinct from a steric competition for a single and rigid binding site and, second, the design of drugs specifically interacting with privileged conformations of the receptor such as agonists, antagonists and desensitizers. The research on nicotinic receptor is still at the forefront in understanding the mode of action of drugs on the nervous system.

  • Transition Metal-Free Domino Hydroamination/Isomerization/Transamidation Sequence: An Entry to Trifluorinated γ-Lactams

    Dorian Schutz, Clément Gommenginger, Baptiste Moegle, Maxime Hourtoule, Ludovik Noël-Duchesneau, Laurence Miesch
    Journal of Organic Chemistry, 2024, ⟨10.1021/acs.joc.4c00878⟩ | Publiée le 16 juillet 2024
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    A method for the construction of trifluorinated-5-methylenepyrrolidinone is reported. This strategy combines an acid-catalyzed two-carbon homologation process between ynamides and aldehydes, providing CF3-substituted dienes followed by a metal-free domino hydroamination/isomerization/transamidation sequence, delivering trifluorinated-5-methylenepyrrolidinone stereoselectively.

  • A closer look at Type I left-handed β-helices provides a better understanding in their sequence-structure relationship: towards their rational design

    Maxime Naudé, Peter Faller, Vincent Lebrun
    Proteins - Structure, Function and Bioinformatics, 2024, 92 (11), pp.1318-1328. ⟨10.1002/prot.26726⟩ | Publiée le 9 juillet 2024
    Article dans une revue

    Abstract Understanding the sequence-structure relationship in protein is of fundamental interest, but has practical applications such as the rational design of peptides and proteins. This relationship in the Type I left-handed β–helix containing proteins is updated and revisited in this study. Analysing the available structures in the Protein Data Base, we could describe further in details the structural features that are important for the stability of this fold, as well as its nucleation and termination. This study is meant to complete previous work, as it provides a separate analysis of the N-terminal and C-terminal rungs of the helix. Particular sequence motifs of these rungs are described along with the structural element they form.

  • Enhanced biosynthesis of coated silver nanoparticles using isolated bacteria from heavy metal soils and their photothermal-based antibacterial activity: integrating Response Surface Methodology (RSM) Hybrid Artificial Neural Network (ANN)-Genetic Algorithm (GA) strategies

    Meroua Safa Mechouche, Fateh Merouane, Ahmed Addad, Lydia Karmazin, Rabah Boukherroub, Nadjem Lakhdari
    World Journal of Microbiology and Biotechnology, 2024, 40 (8), pp.252. ⟨10.1007/s11274-024-04048-1⟩ | Publiée le 24 juin 2024
    Article dans une revue

  • Milk production in pottery. Evidence for various exploited resources used by the first farmers in Central Pyrenees using the morphological, chemical and stable carbon isotopic composition of organic residues from ceramic vessels

    N. Tarifa-Mateo, R. Laborda, A. Sierra, L. Montes, P. Utrilla, M. Saña, E. Motsch, P. Schaeffer, P. Adam
    Archaeological and Anthropological Sciences, 2024, 16 (7), pp.101. ⟨10.1007/s12520-024-02001-9⟩ | Publiée le 11 juin 2024
    Article dans une revue

    From the second part of the 6th millennium BC onwards, pottery manufacture is attested throughout the western Mediterranean. The study of the functional and use of vessels has become a valuable source of information on the culinary patterns and subsistence practices of past societies. In the present study, we have analyzed the organic residues of a total of 37 ceramic vessels from the first Neolithic settlements in the Central Pyrenees. Results from lipid analysis using gas chromatography-mass spectrometry (GC-MS) and GC-stable carbon isotope ratio analyses (GC-IRMS) revealed that from the earliest phases, the use of pottery was related to the exploitation of dairy and meat products, as well as plant resources. The data obtained are contextualized within the general frame of the Pyrenees and the western Mediterranean.

  • Structural analysis of neomycin B and kanamycin A binding Aminoglycosides Modifying Enzymes (AME) and bacterial ribosomal RNA

    Julia Revillo Imbernon, Jean-Marc Weibel, Eric Ennifar, Gilles Prévost, Esther Kellenberger
    Molecular Informatics, 2024, ⟨10.1002/minf.202300339⟩ | Publiée le 10 juin 2024
    Article dans une revue

    Aminoglycosides are crucial antibiotics facing challenges from bacterial resistance. This study addresses the importance of aminoglycoside modifying enzymes in the context of escalating resistance. Drawing upon over two decades of structural data in the Protein Data Bank, we focused on two key antibiotics, neomycin B and kanamycin A, to explore how the aminoglycoside structure is exploited by this family of enzymes. A systematic comparison across diverse enzymes and the RNA A-site target identified common characteristics in the recognition mode, while assessing the adaptability of neomycin B and kanamycin A in various environments.

  • Telluronium‐Catalyzed Halogenation Reactions: Chalcogen‐Bond Activation of N‐Halosuccinimides and Catalysis

    Loic Groslambert, Patrick Pale, Victor Mamane
    Chemistry - A European Journal, 2024, ⟨10.1002/chem.202401650⟩ | Publiée le 24 mai 2024
    Article dans une revue

    The ability of triaryltelluronium salts to interact with N‐halosuccinimides (NXS) through chalcogen bonding (ChB) in the solid state and in solution is demonstrated herein. Cocrystals of the triaryltelluronium bearing two CF3 electron‐withdrawing groups per aryl ring with N‐chloro‐, N‐bromo‐ and N‐iodosuccinimide (respectively NCS, NBS and NIS) were analyzed by X‐ray diffraction, evidencing a ChB between tellurium and the carbonyl group of NXS. This ChB was confirmed in solution by NMR spectroscopy, especially by 125Te NMR titration experiment, which allowed the determination of the association constant (Ka) between the telluronium and NBS. The so‐obtained Ka value of 17.3 ± 0.6 M‐1 indicated a moderate interaction in solution because of the competitive role of the solvent. The strength of the Te‐‐‐O ChB was however sufficient enough to promote the catalytic halofunctionalization of aromatics and of alkenes such as the intra‐ and intermolecular haloalkoxylation and haloesterification of alkenes.

  • New Pyridine Dicarbene Pincer Ligands with Ring Expanded NHCs and their Nickel and Chromium Complexes

    Evangelos a A Papangelis, Katrin Pelzer, Christophe Gourlaouen, Dominique Armspach, Pierre Braunstein, Andreas A Danopoulos, Corinne Bailly, Nikolaos Tsoureas, Dimitrios Triantafyllos Gerokonstantis
    Chemistry - An Asian Journal, 2024, 19, ⟨10.1002/asia.202400169⟩ | Publiée le 22 mai 2024
    Article dans une revue

    <div><p>The pincer complexes [Ni II Br(CNC)]Br (4), [Cr III Br 3 (CNC)] (5 a) and [Cr III Br 2.3 Cl 0.7 (CNC)]</p><p>(5 b), where CNC = 3,3'-(pyridine-2,6diyl)bis (1-mesityl-3,4,5,6-tetrahydropyrimidin-2-ylidene), were obtained from the novel ligand CNC, generated in situ from the precursor (CHNCH)Br 2 and [Ni II Br 2 (PPh 3 ) 2 ] or from [Cr II {N-(SiMe 3 ) 2 } 2 (THF) 2 ] and (CHNCH)Br 2 by aminolysis, respectively. The tetrahedrally distorted square planar (τ 4 ffi0.30) geometry and the singlet ground state of Ni in 4 were attributed to steric constraints of the CNC backbone. Computational methods highlighted the dependence of the coordination geometry and the singlet-triplet energy difference on the size of the N-substituent of the tetrahydropyrimidine wingtips and contrasted it to the situation in 5-membered imidazolin-2-ylidene pincer analogues. The octahedral Cr III metal center in 5 a and 5 b is presumably formed after one electron oxidation from CH 2 Cl 2 . 4/MAO and 5 a/MAO were catalysts of moderate activity for the oligomerization and polymerization of ethylene, respectively. The analogous (CH^N^CH)Br 2 precursor, where (CH^N^CH) = 3,3'-(pyridine-2,6-diylbis(methylene))bis(1-mesityl-3,4,5,6-tetrahydropyrimidin-1-ium), was also prepared, however its coordination chemistry was not studied due to the inherent instability of the resulting free C^N^C ligand.</p></div>

  • Photogeneration of Chlorine Radical from a Self‐Assembled Fluorous 4CzIPN•Chloride Complex: Application in C−H Bond Functionalization

    Victor Carré, Pascale Godard, Raphaël Méreau, Henri‐pierre Jacquot de Rouville, Gediminas Jonusauskas, Nathan Mcclenaghan, Thierry Tassaing, Jean‐marc Vincent
    Angewandte Chemie International Edition, 2024, 63 (26), ⟨10.1002/anie.202402964⟩ | Publiée le 21 mai 2024
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    The chlorine radical is a strong HAT (Hydrogen Atom Transfer) agent that is very useful for the functionalization of C(sp 3 )−H bonds. Albeit highly attractive, its generation from the poorly oxidizable chloride ion mediated by an excited photoredox catalyst is a difficult task. We now report that 8R f8 ‐4CzIPN , an electron‐deficient fluorous derivative of the benchmark 4CzIPN photoredox catalyst belonging to the donor‐acceptor carbazole‐cyanoarene family, is not only a better photooxidant than 4CzIPN , but also becomes an excellent host for the chloride ion. Combining these two properties ultimately makes the self‐assembled 8R f8 ‐4CzIPN •Cl − dual catalyst highly reactive in redox‐neutral Giese‐type C(sp 3 )−H bond alkylation reactions promoted by the chlorine radical. Additionally, because of its fluorous character, the efficient separation/recovery of 8R f8 ‐4CzIPN could be envisioned.

  • Density functional theory beyond the Born–Oppenheimer approximation: exact mapping onto an electronically non-interacting Kohn–Sham molecule

    Emmanuel Fromager, Benjamin Lasorne
    Electronic Structure, 2024, 6 (2), pp.025002. ⟨10.1088/2516-1075/ad45d5⟩ | Publiée le 13 mai 2024
    Article dans une revue

    Abstract This work presents an alternative, general, and in-principle exact extension of electronic Kohn–Sham density functional theory (KS-DFT) to the fully quantum-mechanical molecular problem. Unlike in existing multi-component or exact-factorization-based DFTs of electrons and nuclei, both nuclear and electronic densities are mapped onto a fictitious electronically non-interacting molecule (referred to as KS molecule), where the electrons still interact with the nuclei. Moreover, in the present molecular KS-DFT, no assumption is made about the mathematical form (exactly factorized or not) of the molecular wavefunction. By expanding the KS molecular wavefunction à la Born–Huang, we obtain a self-consistent set of ‘KS beyond Born–Oppenheimer’ electronic equations coupled to nuclear equations that describe nuclei interacting among themselves and with non-interacting electrons. An exact adiabatic connection formula is derived for the Hartree-exchange-correlation energy of the electrons within the molecule and, on that basis, a practical adiabatic density-functional approximation is proposed and discussed.

  • Early stages of Type I-S kerogen formation revealed by Rock-Eval® 7S analysis of sediment from a modern halo-alkaline lake (Dziani Dzaha, Mayotte)

    François Baudin, Ivan Jovovic, Pierre Adam, Magali Ader, Fabien Arnaud, François Gelin, Vincent Grossi
    Organic Geochemistry, 2024, pp.104794. ⟨10.1016/j.orggeochem.2024.104794⟩ | Publiée le 1 mai 2024
    Article dans une revue

    The Dziani Dzaha (Mayotte Islands, Indian Ocean) is a small, shallow, saline and hyperalkaline maar lake. Its surface waters are characterized by intense primary production, inducing the waters below 2 m depth to remain aphotic and anoxic all year round, at least until 2017, when a ~5 m-long core was taken from the center of the lake. The recovered sediments were described and sampled at high resolution. They consist of laminated microbial mats, mixed with carbonate lenses or nodular beds, and rare silty detrital facies. The inorganic and organic carbon contents of 160 samples were analyzed using the Rock-Eval® method, including the Rock-Eval® 7S device which quantifies both total organic sulfur and total sulfur content, in addition to conventional Rock-Eval parameters. The Dziani Dzaha sediments are characterized by high TOC content (8.5 wt.% on average and up to 27.9 wt.%) and variable inorganic carbon content. HI values average 630 mg HC/g TOC and reach up to 834 mg HC/g TOC. TS content varies from 0.3 to 3.6 wt.%, with TSorg/TOC ratios close to 0.01 at the top of the core and fluctuating downcore between 0.02 and 0.05. Interestingly, the pyrolysis thermal stability of sulfurized organic matter increases with depth, and the highest HI values are associated with highest Sorg content, sulfurization of organic matter being generally accompanied by reductive processes. The hydrogen- and organic-sulfur-rich sediments of Dziani Dzaha can be considered modern analogues of Type I and I-S petroleum source rock deposits, such as the Eocene Green River shales and Kimmeridgian Orbagnoux laminites, withremarkable facies and geochemical similarities.

  • Site‐Selective Radical Aromatic C–H Functionalization of Alloxazine and Flavin through Ground‐State Single Electron Transfer

    Agnideep Das, Oscar Charpentier, Cheriehan Hessin, Jules Schleinitz, David Pianca, Nolwenn Le Breton, Sylvie Choua, Laurence Grimaud, Christophe Gourlaouen, Marine Desage-El Murr
    Angewandte Chemie International Edition, 2024, ⟨10.1002/anie.202403417⟩ | Publiée le 16 avril 2024
    Article dans une revue

    Flavins and their alloxazine isomers are key chemical scaffolds for bioinspired electron transfer strategies. Their properties can be fine-tuned by functional groups, which must be introduced at an early stage of the synthesis as their aromatic ring is inert towards post-functionalization. We show that the introduction of a remote metal-binding redox site on alloxazine and flavin activates their aromatic ring towards direct C–H functionalization. Mechanistic studies are consistent with a synthetic sequence involving ground state single electron transfer (SET) with an electrophilic source followed by radical-radical coupling. This unprecedented reactivity opens new opportunities in molecular editing of flavins by direct aromatic post-functionalization and the utility of the method is demonstrated with the site-selective C6 functionalization of alloxazine and flavin with a CF3 group, Br or Cl, that can be further elaborated into OH and aryl for chemical diversification.

  • Combining Desferriferrioxamine B and 1‐Hydroxy‐2‐Piperidone ((PIPO)H) to Chelate Zirconium. Solution Structure of a Model Complex of the [ 89 Zr]Zr−DFOcyclo*−mAb Radioimmunoconjugate

    Floriane Mangin, Osian Fonquernie, Pawel Jewula, Stéphane Brandès, Marie-José Penouilh, Quentin Bonnin, Bruno Vincent, Enrique Espinosa, Emmanuel Aubert, Michel Meyer, Jean-Claude Chambron
    ChemPlusChem, 2024, 89 (7), pp.e202400062. ⟨10.1002/cplu.202400062⟩ | Publiée le 13 avril 2024
    Article dans une revue

    89Zr−immunoPET is a hot topic as 89Zr cumulates the advantages of 64Cu and 124I without their drawbacks. We report the synthesis of a model ligand of a chiral bioconjugable tetrahydroxamic chelator combining the desferriferrioxamine B siderophore and 1-hydroxy-2-piperidone ((PIPO)H), a chiral cyclic hydroxamic acid derivative, and the study by NMR spectroscopy of its zirconium complex. Nuclear Overhauser effect measurements (ROESY) indicated that the complex exists in the form of two diastereomers, in 77 : 23 ratio, resulting from the combination of the central chiralities at the 3-C of the (PIPO)H component and at the Zr4+ cation. The 44 lowest energy structures out of more than 1000 configurations/conformations returned by calculations based on density functional theory were examined. Comparison of the ROESY data and the calculated interatomic H⋅⋅⋅H distances allowed us to select the most probable configuration and conformations of the major complex.

  • Quest for a stable Cu-ligand complex with a high catalytic activity to produce reactive oxygen species

    Merwan Bouraguba, Adeline M. Schmitt, Venkata Suseela Yelisetty, Bertrand Vileno, Frederic Melin, Elise Glattard, Christophe Orvain, Vincent Lebrun, Laurent Raibaut, Marianne Ilbert, Burkhard Bechinger, Petra Hellwig, Christian Gaiddon, Angélique Sour, Peter Faller
    Metallomics, 2024, 16 (5), pp.mfae020. ⟨10.1093/mtomcs/mfae020⟩ | Publiée le 13 avril 2024
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    Metal ion-catalyzed overproduction of reactive oxygen species (ROS) is believed to contribute significantly to oxidative stress and be involved in several biological processes, from immune defense to development of diseases. Among the essential metal ions, copper is one of the most efficient catalysts in ROS production in the presence of O2 and a physiological reducing agent such as ascorbate. To control this chemistry, Cu ions are tightly coordinated to biomolecules. Free or loosely bound Cu ions are generally avoided to prevent their toxicity. In the present report, we aim to find stable Cu-ligand complexes (Cu-L) that can efficiently catalyze the production of ROS in the presence of ascorbate under aerobic conditions. Thermodynamic stability would be needed to avoid dissociation in the biological environment, and high ROS catalysis is of interest for applications as antimicrobial or anticancer agents. A series of Cu complexes with the well-known tripodal and tetradentate ligands containing a central amine linked to three pyridyl-alkyl arms of different lengths were investigated. Two of them with mixed arm length showed a higher catalytic activity in the oxidation of ascorbate and subsequent ROS production than Cu salts in buffer, which is an unprecedented result. Despite these high catalytic activities, no increased antimicrobial activity toward Escherichia coli or cytotoxicity against eukaryotic AGS cells in culture related to Cu-L-based ROS production could be observed. The potential reasons for discrepancy between in vitro and in cell data are discussed.

  • Influence of Nitridation Conditions on the Doping Sites and Photocatalytic Visible Light Activity of Nb,N-Codoped TiO2

    Qingyang Xi, Vasiliki Papaefthimiou, Nolwenn Le Breton, Marc Lenertz, Mai Takashima, Valérie Keller, Bertrand Vileno, Thomas Cottineau
    Chemistry of Materials, 2024, 36 (8), pp.3705 - 3716. ⟨10.1021/acs.chemmater.3c03280⟩ | Publiée le 6 avril 2024
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    The photocatalytic performance of Nb,N-codoped TiO 2 nanoparticles obtained via the sol-gel method was compared to that of N-doped TiO 2 . The study focused on investigating the effects of nitridation conditions on nitrogen insertion with a highlight on the nature of the doping sites in the photocatalyst depending on the initial presence of niobium in the TiO 2 . The photodegradation of methylene blue in solution under UV, visible, and simulated solar light was used to evaluate the photocatalytic activity of TiO 2 , Nb-or N-doped TiO 2 , and Nb,N-codoped TiO 2 nanoparticles. Codoped TiO 2 produced by mild thermal nitridation exhibits the best photocatalytic activity, with a strong contribution from visible light. On the contrary, the codoped TiO 2 produced by more intense thermal nitridation presents lower photocatalytic performances than TiO 2 despite a small improvement of activity in the visible range. In addition to material characterization (X-ray diffraction, UV-vis spectroscopy, and X-ray photoelectron spectroscopy), electron paramagnetic resonance and reversed double-beam photoacoustic spectroscopy measurements were used to identify the respective doping sites and ultimately propose the electronic band structure for each sample of Nb:TiO 2 , N:TiO 2 , and Nb,N:TiO 2 . Proper thermal nitridation conditions improve the charge compensation between Nb 5+ and N 3-, thereby enhancing the photocatalytic activity. However, too intense nitridation conditions led to the generation of oxygen vacancies and a large amount of Ti 3+ acting as charge recombination centers, resulting in significant deterioration of the photocatalytic performances. This study highlights the importance of understanding the intricate charge compensation process in codoped (M,N) TiO 2 materials, as the photocatalytic performance cannot be elucidated solely by the cation/anion ratio but also by considering the nature of the doping sites generated during synthesis.

  • Selective transition enhancement in a g‐engineered diradical

    Joe Komeda, Athanassios Boudalis, Nicolas Montenegro-Pohlhammer, Cyril Antheaume, Asato Mizuno, Philippe Turek, Mario Ruben
    Chemistry - A European Journal, 2024, ⟨10.1002/chem.202400420⟩ | Publiée le 2 avril 2024
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    A diradical with engineered g-asymmetry was synthesized by grafting a nitroxide radical onto the [Y(Pc)2]˙ radical platform. Various spectroscopic techniques and computational studies revealed that the electronic structures of the two spin systems remained minimally affected within the diradical system. Fluid-solution Electron Paramagnetic Resonance (EPR) experiments revealed a weak exchange coupling with |J| ~ 0.014 cm-1, subsequently rationalized by CAS-SCF calculations. Frozen solution continuous-wave (CW) EPR experiments showed a complicated and power-dependent spectrum that eluded analysis using the point-dipole model. Pulse EPR manipulations with varying microwave powers, or under varying magnetic fields, demonstrated that different resonances could be selectively enhanced or suppressed, based on their different tipping angles. In particular, Field-Swept Echo-Detected (FSED) spectra revealed absorptions of MW power-dependent intensities, while Field-Swept Spin Nutation (FSSN) experiments revealed two distinct Rabi frequencies. This study introduces a methodology to synthesize and characterize g-asymmetric two-spin systems, of interest in the implementation of spin-based CNOT gates.

  • N‐terminal modification of an LAH4‐derived peptide increases mRNA delivery in the presence of serum

    Candice Dussouillez, Morane Lointier, Mohammed-Karim Sebane, Sylvie Fournel, Burkhard Bechinger, Antoine Kichler
    Journal of Peptide Science, 2024, in press, ⟨10.1002/psc.3597⟩ | Publiée le 25 mars 2024
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    The recently developed mRNA-based coronavirus SARS-CoV-2 vaccines highlighted the great therapeutic potential of the mRNA technology. Although the lipid nanoparticles used for the delivery of the mRNA are very efficient, they showed, in some cases, the induction of side effects as well as the production of antibodies directed against particle components. Thus, the development of alternative delivery systems is of great interest in the pursuit of more effective mRNA treatments. In the present work, we evaluated the mRNA transfection capacities of a series of cationic histidine-rich amphipathic peptides derived from LAH4. We found that while the LAH4-A1 peptide was an efficient carrier for mRNA, its activity was highly serum sensitive. Interestingly, modification of this cell penetrating peptide at the N-terminus with two tyrosines or with salicylic acid allowed to confer serum resistance to the carrier. Keywords: LAH4 peptide family; amphipathic peptide; cell penetrating peptide; gene delivery; mRNA transfection.

  • Reliable I / V characteristics and long lifetime of porphyrin-based single-molecule junctions

    Xinlei Yao, Maxime Vonesch, Lihao Guan, Jennifer A. Wytko, Jean Weiss, Xiaonan Sun, Jean-Christophe Lacroix
    Journal of Materials Chemistry C, 2024, 12 (12), pp.4326-4335. ⟨10.1039/D3TC04142E⟩ | Publiée le 21 mars 2024
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    In this work diamino-porphyrin derivatives, in their free base or cobalt complex forms, have been used to construct SMJs. Porphyrin oligomers were covalently bonded to a bottom electrode by diazonium cation electroreduction and a STM tip was used to complete the junction. Conductance versus time (G(t)) measurements reveal stable SMJs with lifetimes as long as 70 s, attributable to the diazonium bonding procedure and the amino anchoring groups. SMJ conductance was studied statistically by three methods: the STM-bj G histo (d) histograms, STM G time (t) and voltage-dependent G volt (V) heat maps. Conductance and attenuation factors (b) for Co or free-base porphyrin SMJs, compared by the three methods, are fully consistent, length-dependent and show a strong molecular signature. Trends in the variation of the attenuation factors versus voltage indicate a voltage-driven b decrease for both types of SMJ.

  • The Synthetic Peptide LyeTx I mn∆K, Derived from Lycosa erythrognatha Spider Toxin, Is Active against Methicillin-Resistant Staphylococcus aureus (MRSA) In Vitro and In Vivo

    Ana Paula Gonçalves Coelho Vieira, Amanda Neves de Souza, William Gustavo Lima, Julio Cesar Moreira Brito, Daniela Carolina Simião, Lucas Vinícius Ribeiro Gonçalves, Lídia Pereira Barbosa Cordeiro, Denise de Oliveira Scoaris, Simone Odília Antunes Fernandes, Jarbas Magalhães Resende, Burkhard Bechinger, Rodrigo Moreira Verly, Maria Elena de Lima
    Antibiotics, 2024, 13 (3), pp.248. ⟨10.3390/antibiotics13030248⟩ | Publiée le 8 mars 2024
    Article dans une revue

  • Development and utilization of new O2-independent bioreporters

    Eva Agranier, Pauline Crétin, Aurélie Joublin-Delavat, Léa Veillard, Katia Touahri, François Delavat
    Microbiology Spectrum, 2024, ⟨10.1128/spectrum.04091-23⟩ | Publiée le 5 mars 2024
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    ABSTRACT Fluorescent proteins have revolutionized science since their discovery in 1962. They have enabled imaging experiments to decipher the function of proteins, cells, and organisms, as well as gene regulation. Green fluorescent protein and all its derivatives are now standard tools in cell biology, immunology, molecular biology, and microbiology laboratories around the world. A common feature of these proteins is their dioxygen (O 2 )-dependent maturation allowing fluorescence, which precludes their use in anoxic contexts. In this work, we report the development and in cellulo characterization of genetic circuits encoding the O 2 -independent KOFP-7 protein, a flavin-binding fluorescent protein. We have optimized the genetic circuit for high bacterial fluorescence at population and single-cell level, implemented this circuit in various plasmids differing in host range, and quantified their fluorescence under both aerobic and anaerobic conditions. Finally, we showed that KOFP-7-based constructions can be used to produce fluorescing cells of Vibrio diazotrophicus , a facultative anaerobe, demonstrating the usefulness of the genetic circuits for various anaerobic bacteria. These genetic circuits can thus be modified at will, both to solve basic and applied research questions, opening a highway to shed light on the obscure anaerobic world. IMPORTANCE Fluorescent proteins are used for decades, and have allowed major discoveries in biology in a wide variety of fields, and are used in environmental as well as clinical contexts. Green fluorescent protein (GFP) and all its derivatives share a common feature: they rely on the presence of dioxygen (O 2 ) for protein maturation and fluorescence. This dependency precludes their use in anoxic environments. Here, we constructed a series of genetic circuits allowing production of KOFP-7, an O 2 -independant flavin-binding fluorescent protein. We demonstrated that Escherichia coli cells producing KOFP-7 are fluorescent, both at the population and single-cell levels. Importantly, we showed that, unlike cells producing GFP, cells producing KOFP-7 are fluorescent in anoxia. Finally, we demonstrated that Vibrio diazotrophicus NS1, a facultative anaerobe, is fluorescent in the absence of O 2 when KOFP-7 is produced. Altogether, the development of new genetic circuits allowing O 2 -independent fluorescence will open new perspective to study anaerobic processes.

  • The mean square displacement of a ballistic quantum particle

    Oussama Bindech, Fabien Gatti, Souvik Mandal, Roberto Marquardt, L. Shi, Jean Christophe Tremblay
    Molecular Physics, 2024, 122 (15-16), ⟨10.1080/00268976.2024.2322023⟩ | Publiée le 4 mars 2024
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    The quantum mechanical definition of the mean square displacement proposed in a previous work (R. Marquardt, Mol. Phys. 119, e1971315 (2021)) is extended to the continuum of a free particle in the interval topology. Integrals are evaluated in the formalism of generalized functions (distributions). A comparison with the definition based on the quantum correlation function is carried out. It is found that the latter diverges, when evaluated in a ring topology with infinitely large rings.

  • Radical S -Adenosyl- l -Methionine Enzyme PylB: A C-Centered Radical to Convert l -Lysine into (3 R )-3-Methyl- d -Ornithine

    Feryel Soualmia, Mickael Cherrier, Timothée Chauviré, Mickaël Mauger, Philip Tatham, Alain Guillot, Xavier Guinchard, Lydie Martin, Patricia Amara, Jean-Marie Mouesca, Meriem Daghmoum, Alhosna Benjdia, Serge Gambarelli, Olivier Berteau, Yvain Nicolet
    Journal of the American Chemical Society, 2024, 146 (10), pp.6493-6505. ⟨10.1021/jacs.3c03747⟩ | Publiée le 1 mars 2024
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    PylB is a radical S-adenosyl-l-methionine (SAM) enzyme predicted to convert l-lysine into (3R)-3-methyl-d-ornithine, a precursor in the biosynthesis of the 22nd proteogenic amino acid pyrrolysine. This protein highly resembles that of the radical SAM tyrosine and tryptophan lyases, which activate their substrate by abstracting a H atom from the amino-nitrogen position. Here, combining in vitro assays, analytical methods, electron paramagnetic resonance spectroscopy, and theoretical methods, we demonstrated that instead, PylB activates its substrate by abstracting a H atom from the Cγ position of L-lysine to afford the radical-based β-scission. Strikingly, we also showed that PylB catalyzes the reverse reaction, converting (3R)-3-methyl-d-ornithine into L-lysine and using catalytic amounts of the 5'-deoxyadenosyl radical. Finally, we identified significant in vitro production of 5'-thioadenosine, an unexpected shunt product that we propose to result from the quenching of the 5'-deoxyadenosyl radical species by the nearby [Fe4S4] cluster.

  • Glutathione Protects other Cellular Thiols against Oxidation by Cu II ‐Dp44mT

    Iman Doumi, Lukas Lang, Bertrand Vileno, Marcel Deponte, Peter Faller
    Chemistry - A European Journal, 2024, 30 (21), ⟨10.1002/chem.202304212⟩ | Publiée le 26 février 2024
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    Cu-thiosemicarbazones have been intensively investigated for their application in cancer therapy or as antimicrobials. Copper(II)-di-2-pyridylketone-4,4-dimethyl-thiosemicarbazone (CuII-Dp44mT) showed anticancer activity in the submicromolar concentration range in cell culture. The interaction of CuII-Dp44mT with thiols leading to their depletion or inhibition was proposed to be involved in this activity. Indeed, CuII-Dp44mT can catalyze the oxidation of thiols although with slow kinetics. The present work aims to obtain insights into the catalytic activity and selectivity of CuII-Dp44mT toward the oxidation of different biologically relevant thiols. Reduced glutathione (GSH), L-cysteine (Cys), N-acetylcysteine (NAC), D-penicillamine (D-Pen), and the two model proteins glutaredoxin (Grx) and thioredoxin (Trx) were investigated. CuII-Dp44mT catalyzed the oxidation of these thiols with different kinetics, with rates in the following order D-Pen>Cys≫NAC>GSH and Trx>Grx. CuII-Dp44mT was more efficient than CuII chloride for the oxidation of NAC and GSH, but not D-Pen and Cys. In mixtures of biologically relevant concentrations of GSH and either Cys, Trx, or Grx, the oxidation kinetics and spectral properties were similar to that of GSH alone, indicating that the interaction of these thiols with CuII-Dp44mT is dominated by GSH. Hence GSH could protect other thiols against potential deleterious oxidation by CuII-Dp44mT.

  • Toward Efficient and Stereoselective Aromatic and Dearomative Cope Rearrangements: Experimental and Theoretical Investigations of α‐Allyl‐α’‐Aromatic γ‐Lactone Derivatives.

    Morgane Mando, Fabienne Grellepois, Aurélien Blanc, Eric Hénon, Emmanuel Riguet
    Chemistry - A European Journal, 2024, ⟨10.1002/chem.202304138⟩ | Publiée le 26 février 2024
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    The aromatic Cope rearrangement is an elusive transformation that has been the subject of a limited number of investigations compared to those seemingly close analogues, namely the Cope and aromatic Claisen rearrangement. Herein we report our investigations inspired by moderate success observed in the course of pioneering works. By careful experimental and theoretical investigations, we demonstrate that key substitutions on 1,5‐hexadiene scaffold allow fruitful transformations. Especially, efficient functionalisation of the heteroaromatic rings results from the aromatic Cope rearrangement, while highly stereoselective interrupted aromatic Cope rearrangements highlight the formation of chiral compounds through a dearomative process.

  • X-ray crystallographic analysis of the antiferromagnetic low-temperature phase of galvinoxyl: investigating magnetic duality in organic radicals

    Rie Suizu, Yoshiaki Shuku, Vincent Robert, Pablo Roseiro, Nadia Ben Amor, Zain Khawar, Neil Robertson, Kunio Awaga
    Dalton Transactions, 2024, 53 (3), pp.1961-1965. ⟨10.1039/D3DT03601d⟩ | Publiée le 1 février 2024
    Article dans une revue

    Galvinoxyl, as one of the most extensively studied organic stable free radicals, exhibits a notable phase transition from a high-temperature (HT) phase with a ferromagnetic (FM) intermolecular interaction to a low-temperature (LT) phase with an antiferromagnetic (AFM) coupling at 85 K. Despite significant research efforts, the crystal structure of the AFM LT phase has remained elusive. This study successfully elucidates the crystal structure of the LT phase, which belongs to the P[1 with combining macron] space group. The crystal structure of the LT phase is found to consist of a distorted dimer, wherein the distortion arises from the formation of short intermolecular distances between anti-node carbons in the singly-occupied molecular orbital (SOMO). Starting from the structure of the LT phase, wave function calculations show that the AFM coupling 2J/kB varies significantly from −1069 K to −54 K due to a parallel shift of the molecular planes within the dimer.

  • Graphene oxide and bacteria interactions: what is known and what should we expect?

    Diliana D Simeonova, Katrin Pollmann, Alberto Bianco, Didier Lièvremont
    MSphere, 2024, 9 (1), ⟨10.1128/msphere.00715-23⟩ | Publiée le 30 janvier 2024
    Article dans une revue

    ABSTRACT Graphene oxide (GO) and graphene-based materials (GBMs) have gained over the last two decades considerable attention due to their intrinsic physicochemical properties and their applications. Besides, a lot of concern regarding the potential toxicity of GBMs has emerged. One of the aspects of concern is the interactions between GBMs and different environmental compartments, especially indigenous microbial and, in particular, bacterial communities. Recent research showed that GO and GBMs impacted bacterial pure culture or bacterial communities; therefore, these interactions have to be further studied to better understand and assess the fate of these materials in the environment. Here, we present our opinion and hypotheses related to possible degradation mechanisms of GO that can be used by environmental bacteria. This work is the first attempt to deduce and summarize plausible degradation pathways of GO, from structurally similar recalcitrant and toxic compounds, such as polyaromatic hydrocarbons.

  • π‐Conjugated Metal Free Porphyrin as Organic Cathode for Aluminum Batteries

    Shagor Chowdhury, Noha Sabi, Rafael Córdoba Rojano, Nolwenn Le Breton, Athanassios Boudalis, Svetlana Klayatskaya, Sonia Dsoke, Mario Ruben
    Batteries & Supercaps, 2024, 7 (4), ⟨10.1002/batt.202300285⟩ | Publiée le 29 janvier 2024
    Article dans une revue

    Abstract Nowadays, Al (dual) batteries are mainly based on graphite cathode materials. Besides this material, the limited life cycle and the rate performance of other possible cathode materials have hampered the development of practical and sustainable rechargeable aluminium batteries (RABs). Herein, we report an organic A 4 ‐metal‐free porphyrin system bearing diphenylamimo‐phenyl functional units as an Al‐storage cathode material, which is capable of delivering a reversible capacity of 83 mAh g −1 at 1 A g −1 after 200 cycles and displays a good cycling stability. Achieving such high rate performance opens a pathway to developing practical sustainable cathodes for aluminium batteries.

  • Optimized excitonic transport mediated by local energy defects: Survival of optimization laws in the presence of dephasing

    Lucie Pepe, Vincent Pouthier, Saad Yalouz
    Physical Review E , 2024, 109 (1), pp.014303. ⟨10.1103/PhysRevE.109.014303⟩ | Publiée le 8 janvier 2024
    Article dans une revue

    In an extended star with peripheral defects and a core occupied by a trap, it has been shown that exciton-mediated energy transport from the periphery to the core can be optimized [S. Yalouz et al. Phys. Rev. E 106, 064313 (2022)]. If the defects are judiciously chosen, the exciton dynamics is isomorphic to that of an asymmetric chain and a speedup of the excitonic propagation is observed. Here, we extend this previous work by considering that the exciton in both an extended star and an asymmetric chain, is perturbed by the presence of a dephasing environment. Simulating the dynamics using a Lindblad master equation, two questions are addressed: how does the environment affect the energy transport on these two networks? And, do the two systems still behave equivalently in the presence of dephasing? Our results reveal that the timescale for the exciton dynamics strongly depends on the nature of the network. But quite surprisingly, the two networks behave similarly regarding the survival of their optimization law. In both cases, the energy transport can be improved using the same original optimal tuning of energy defects as long as the dephasing remains weak. However, for moderate/strong dephasing, the optimization law is lost due to quantum Zeno effect.

  • Stabilization of Luminescent Mononuclear Three‐Coordinate CuI Complexes by Two Distinct Cavity‐Shaped Diphosphanes Obtained from a Single α‐Cyclodextrin Precursor

    Tuan-Anh Phan, Matthieu Jouffroy, Dominique Matt, Nicola Armaroli, Alejandra Saavedra Moncada, Elisa Bandini, Béatrice Delavaux-Nicot, Jean-Franco̧is Nierengarten, Dominique Armspach
    Chemistry - A European Journal, 2024, 30 (7), pp.e202302750. ⟨10.1002/chem.202302750⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Slightly different reaction conditions afforded two distinct cavity‐shaped cis‐chelating diphosphanes from the same starting materials, namely diphenyl(2‐phosphanylphenyl)phosphane and an α‐cyclodextrin‐derived dimesylate. Thanks to their metal confining properties, the two diphosphanes form only mononuclear [CuX(PP)] complexes (X = Cl, Br, or I) with the tricoordinated metal ion located just above the center of the cavity. The two series of CuI complexes display markedly different luminescence properties that are both influenced by the electronic properties of the ligand and the unique steric environment provided by the cyclodextrin (CD) cavity. The excited state lifetimes of all complexes are significantly longer than those of cavity‐free analogues suggesting peculiar electronic effects that affect radiative deactivation constants. The overall picture stemming from absorption and emission data suggests close lying charge‐transfer (MLCT, XLCT) and triplet ligand‐centered (LC) excited states.

  • Alloxazine-Based Ligands Appended with Coordinating Groups: Synthesis, Electrochemical Studies, and Formation of Coordination Polymers

    Jaison Casas, David Pianca, Nolwenn Le Breton, Abdelaziz Jouaiti, Christophe Gourlaouen, Marine Desage-El Murr, Steven Le Vot, Sylvie Choua, Sylvie Ferlay
    Inorganic Chemistry, 2024, 63 (11), pp.4802-4806. ⟨10.1021/acs.inorgchem.3c04550⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Three new ligands based on the alloxazine core appended with pyridyl coordinating groups have been designed, synthesized, and characterized. The ligands are revealed to be redox-active in DMF solution, as attested to by CV and combined CV/EPR studies. The spin of the reduced species appears to be delocalized on the alloxazine core, as attested to by DFT calculations. The coordination abilities of one of the ligands toward Cu$^{2+}$ or Ni$^{2+}$ 3d cations revealed the formation of the first alloxazine-based 3D coordination polymers, presenting strong π–π stacking and substantial cavities. Preliminarily charge/discharge experiments in Li batteries evidence Li$^+$ insertion in such systems

  • One touch is all it takes: the supramolecular interaction between ubiquitin and lanthanide complexes revisited by paramagnetic NMR and molecular dynamics

    Karen dos Santos, Alessio Bartocci, Natacha Gillet, Sandrine Denis-Quanquin, Amandine Roux, Eugene Lin, Zeren Xu, Raphael Finizola, Pauline Chedozeau, Xi Chen, Cédric Caradeuc, Mathieu Baudin, Gildas Bertho, François Riobé, Olivier Maury, Elise Dumont, Nicolas Giraud
    Physical Chemistry Chemical Physics, 2024, 26 (20), pp.14573 - 14581. ⟨10.1039/d4cp00463a⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The supramolecular interaction between lanthanide complexes and proteins is at the heart of numerous chemical and biological studies. Some of these complexes have demonstrated remarkable interaction properties with proteins or peptides in solution and in the crystalline state. Here we have used the paramagnetism of lanthanide ions to characterize the affinity of two lanthanide complexes for ubiquitin. As the interaction process is dynamic, the acquired NMR data only reflect the time average of the different steps. We have used molecular dynamics (MD) simulations to get a deeper insight into the detailed interaction scenario at the microsecond scale. This NMR/MD approach enabled us to establish that the tris-dipicolinate complex interacts specifically with arginines and lysines, while the crystallophore explores the protein surface through weak interactions with carboxylates. These observations shed new light on the dynamic interaction properties of these complexes, which will ultimately enable us to propose a crystallization mechanism.

  • Cyclotribenzylene alkynylgold( i ) phosphine complexes: synthesis, chirality, and exchange of phosphine

    Jing Zhang, Nathalie Zorn, Emmanuelle Leize-Wagner, Marion Jean, Nicolas Vanthuyne, Enrique Espinosa, Emmanuel Aubert, Bruno Vincent, Jean-Claude Chambron
    Dalton Transactions, 2024, 53 (12), pp.5521-5533. ⟨10.1039/d3dt04279k⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Two different alkynyl-substituted C3-symmetric cyclotribenzylenes (CTB) were synthesized in racemic and enantiomerically pure forms, and six gold(I) phosphine complexes differring by the nature of the CTB and the phosphine were prepared and characterized, in particular by NMR spectroscopy, DOSY, electronic circular dichroism (ECD), and electrospray ionization mass spectrometry (ESI-MS). Their ECD patterns depended on the substitution of the starting CTBs and were shifted bathochromically by comparison with the latter. ESI-MS in the presence of HCO2H allowed us to detect the complexes as proton adducts. The intensities of the signals were stronger when the phosphine was more electron-rich. This technique was also used to investigate the exchange of phosphine betweeen pairs of CTB complexes. The scrambling reaction was demonstrated by the higher intensity of the signals of the complexes subjected to the exchange of a single phosphine ligand by comparison with the intensity of the signals of the starting complexes.

  • A weak coupling mechanism for the early steps of the recovery stroke of myosin VI: A free energy simulation and string method analysis

    Florian E C Blanc, Anne Houdusse, Marco Cecchini
    PLoS Computational Biology, 2024, 20 (4), pp.e1012005. ⟨10.1371/journal.pcbi.1012005⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Myosin motors use the energy of ATP to produce force and directed movement on actin by a swing of the lever-arm. ATP is hydrolysed during the off-actin re-priming transition termed recovery stroke. To provide an understanding of chemo-mechanical transduction by myosin, it is critical to determine how the reverse swing of the lever-arm and ATP hydrolysis are coupled. Previous studies concluded that the recovery stroke of myosin II is initiated by closure of the Switch II loop in the nucleotide-binding site. Recently, we proposed that the recovery stroke of myosin VI starts with the spontaneous re-priming of the converter domain to a putative pre-transition state (PTS) intermediate that precedes Switch II closing and ATPase activation. Here, we investigate the transition from the pre-recovery, post-rigor (PR) state to PTS in myosin VI using geometric free energy simulations and the string method. First, our calculations rediscover the PTS state agnostically and show that it is accessible from PR via a low free energy transition path. Second, separate path calculations using the string method illuminate the mechanism of the PR to PTS transition with atomic resolution. In this mechanism, the initiating event is a large movement of the converter/ lever-arm region that triggers rearrangements in the Relay-SH1 region and the formation of the kink in the Relay helix with no coupling to the active site. Analysis of the free-energy barriers along the path suggests that the converter-initiated mechanism is much faster than the one initiated by Switch II closure, which supports the biological relevance of PTS as a major on-pathway intermediate of the recovery stroke in myosin VI. Our analysis suggests that lever-arm re-priming and ATP hydrolysis are only weakly coupled, so that the myosin recovery stroke is initiated by thermal fluctuations and stabilised by nucleotide consumption via a ratchet-like mechanism.

  • Synthesis, Characterization, and Properties of a Titanium(IV)-Tetrathiafulvalene-Based Complex

    Jaison Casas, Stéphane Baudron, Antoine Bonnefont, Alain Chaumont, Jérôme Chauvin, Pierre Mobian, Laurent Ruhlmann
    Inorganic Chemistry, 2024, 63 (21), pp.10057-10067. ⟨10.1021/acs.inorgchem.4c01389⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    To deeply investigate the interaction between a tetrathiafulvalene (TTF) unit and a Ti(IV) center, a monomeric heteroleptic octahedral Ti(IV) complex containing a diimine ligand composed of a 1,10-phenanthroline core fused with a TTF fragment (ligand 2a) was prepared. The stable complex formulated as Ti(1)$_2$(2a), where 1 is a 2,2′-biphenolato derivative, was efficiently synthesized by following a one-step approach. This complex and its model species [Ti(1)$_2$(2b)] were fully characterized in solution, and their solid-state structures were established by single-crystal X-ray diffraction analysis. Density functional theory calculations allowed the assignment of the frontier orbitals involved in the electronic transitions characterized by ultraviolet–visible absorption spectroscopy. Electrochemical and spectroelectrochemical studies revealed that the TTF unit within Ti(1)$_2$(2a) can undergo two reversible one-electron oxidation processes; a reversible one-electron reduction of the Ti(IV) atom was highlighted. The photophysical measurements performed for this donor–acceptor molecular system indicated that an electron transfer process upon light excitation occurred within Ti(1)$_2$(2a).

  • Binuclear iridium(III) complexes for efficient near-infrared light-emitting electrochemical cells with electroluminescence up to 800 nm

    Lavinia Ballerini, Wei-Min Zhang, Thomaz Groizard, Christophe Gourlaouen, Federico Polo, Abdelaziz Jouaiti, Hai-Ching Su, Matteo Mauro
    Journal of Materials Chemistry C, 2024, 12 (33), pp.12769-12783. ⟨10.1039/d4tc02040e⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Near infrared (NIR) emitting optoelectronic devices have great potential for applications in communication, encryption technologies, night-vision display and photodynamic biomedical devices. Nevertheless, their development is currently hampered by the lack of efficient NIR-emissive materials. Herein, a novel class of cationic binuclear Ir(III) emitters (Ir-D1 and Ir-D2) based on a ditopic coordinating scaffold featuring the π-deficient thiazolo[5,4-d]thiazole and π-accepting moiety (either pyridine or pyrazine), is described and fully characterized using photophysical and computational techniques. Comparison with the parental mononuclear derivatives Ir-M1 and Ir-M2 is provided as well. Remarkably, the binuclear complexes display NIR photoluminescence in solution with a maximum up to λem = ca. 840 nm, which represent some rare examples of metal complexes emitting in this spectral region. Interestingly, NIR photoluminescence is retained in polymer-matrix thin-film for the binuclear counterparts. These findings prompt the successful use of these NIR emitters as electroactive materials in light emitting electrochemical cells (LECs). Binuclear complexes Ir-D1 and Ir-D2 yield electroluminescence peaking at λEL = 750 and 800 nm, respectively, and device performances that are the highest reported for LECs in this spectral region to date for molecular (i.e. non-excimer) emitters. This work demonstrates the superior performances of the binuclear design strategy for achieving efficient NIR electroluminescence.

  • Bifunctional and recyclable polyesters by chemoselective ring-opening polymerization of a δ-lactone derived from CO2 and butadiene

    Jinbo Zhang, Lihang Jiang, Shaofeng Liu, Junhao Shen, Pierre Braunstein, Yong Shen, Xiaohui Kang, Zhibo Li
    Nature Communications, 2024, 15, pp.8698. ⟨10.1038/s41467-024-52090-2⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    When aiming at the direct use of CO<sub>2</sub> for the preparation of advanced/valueadded materials, the synthesis of CO 2 /olefin copolymers is very appealing but challenging. The δ-lactone 3-ethylidene-6-vinyltetrahydro-2H-pyran-2-one (EVP), synthesized by telomerization of CO<sub>2</sub> with 1,3-butadiene, is a promising monomer. However, its chemoselective ring-opening polymerization (ROP) is hampered by unfavorable thermodynamics and the competitive polymerization of highly reactive C=C double bonds under usual conditions. Herein, we report the chemoselective ROP of EVP using a phosphazene/urea binary catalyst, affording exclusively a linear unsaturated polyester poly(EVP) ROP , with a molar mass (M n ) up to 16.1 kg•mol -1 and a narrow distribution (Ð &lt; 1.6), which can be fully recycled back to the pristine monomer, thus establishing a monomer-polymer-monomer closed-loop life cycle. In these polyesters, the CO<sub>2</sub> content reaches 33 mol% (29 wt%). The reasons for the unexpected chemoselectivity were investigated by Density-functional theory (DFT) calculations. The poly(EVP) ROP features two pendent C=C double bonds per repeating unit, which show distinct reactivity and thus can be properly engaged in sequential functionalizations towards the synthesis of bifunctional polyesters. We disclose here a methodology providing a facile access to bifunctional and recyclable polyesters from readily available feedstocks.

  • N-Heterocyclic carbene-initiated epoxide/anhydride ring-opening copolymerization: effective and selective organoinitiators for the production of various polyesters

    Gaël Printz, Redoy Gazi Shuvo, Antoine Schweizer, Dmytro Ryzhakov, Christophe Gourlaouen, Lielou Lantigner, Béatrice Jacques, Samir Messaoudi, Franck Le Bideau, Samuel Dagorne
    Polymer Chemistry, 2024, 15 (38), pp.3901 - 3906. ⟨10.1039/d4py00778f⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The present report describes the first use of unprotected and "free" N-heterocyclic carbenes (NHCs), such as IMes, IPr and air-stable Cl-IPr carbenes, as single component initiators for the alternating ringopening co-polymerization (ROCOP) of cyclic anhydrides ( phthalic anhydride, PA; succinic anhydride, SA) and various epoxides to efficiently and selectively access the corresponding polyesters in a well-defined manner and as metal-free materials. In the case of ROCOP runs with PA as the anhydride source, control experiments are in line with an initiation via ring-opening of PA by the NHC moiety, as established with the synthesis and structural characterization of the IMes-PA ring-opened product 1. The present NHC systems were further exploited as ROCOP initiators of PA and bio-sourced epoxides such as eugenyl glycidyl ether (EGE) and safrole glycidylether (SO) yielding the production of regioregular p(PA-alt-EGE) polyester, as well as p(PA-alt-SO), a novel polyester material.

  • Low coordinate Zn( ii ) organocations bearing extremely bulky NHC ligands: structural features, air-/water-tolerance and use in hydrosilylation and hydrogenation catalysis

    Xuejuan Xu, Jordan Parmentier, Christophe Gourlaouen, Béatrice Jacques, Samuel Dagorne
    Dalton Transactions, 2024, 53 (38), pp.15849-15858. ⟨10.1039/D4DT02152E⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Super bulky [(ITr)Zn(C 6 F 5 )] + cation is stable towards hydrolysis and reversibly coordinates water at room temperature. Despite its steric bulk, it is an effective imine hydrogenation and CO 2 hydrosilylation catalyst.

  • Mixed Thioether/Amine‐Functionalized Expanded Calixarenes, Related Macropolycycles, and Metal Complexes thereof

    Josef Taut, Frederik Schleife, Martin Börner, Clément Bonnot, Henri-Pierre Jacquot de Rouville, Jean-Claude Chambron, Berthold Kersting
    European Journal of Inorganic Chemistry, 2024, 27 (5), pp.e202300580. ⟨10.1002/ejic.202300580⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    A series of tetraaza-expanded calix[4]arene analogues (2–4), in which two of the four aryl groups are ethylene-protected thiophenol components were prepared from tetraaldehyde 1. Two of these strapped macrocycles were characterized crystallographically, as well as the dipalladium complex of 4. The same tetraaldehyde had been previously used for the synthesis of a macrotricycle (5) and a macropentacycle (6), the coordination properties of which have been investigated. In particular, ligand 6 was shown to be able to encapsulate a Cu+ or a Ag+ ion in the tetrahedral coordination pocket offered by a bridgehead nitrogen atom and the three proximal thioether sulfur atoms.

  • Studying Target–Engagement of Anti-Infectives by Solvent-Induced Protein Precipitation and Quantitative Mass Spectrometry

    Lorenzo Bizzarri, Dominik Steinbrunn, Thibaut Quennesson, Antoine Lacour, Gabriella Ines Bianchino, Patricia Bravo, Philippe Chaignon, Jonas Lohse, Pascal Mäser, Myriam Seemann, Serge Van Calenbergh, Anna K H Hirsch, Hannes Hahne
    ACS Infectious Diseases, In press, ⟨10.1021/acsinfecdis.4c00417⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Antimicrobial resistance (AMR) poses a serious threat to global health. The rapid emergence of resistance contrasts with the slow pace of antimicrobial development, emphasizing the urgent need for innovative drug discovery approaches. This study addresses a critical bottleneck in early drug development by introducing integral solvent-induced protein precipitation (iSPP) to rapidly assess the target-engagement of lead compounds in extracts of pathogenic microorganisms under close-to-physiological conditions. iSPP measures the change in protein stability against solvent-induced precipitation in the presence of ligands. The iSPP method for bacteria builds upon established SPP procedures and features optimized denaturation gradients and minimized sample input amounts. The effectiveness of the iSPP workflow was initially demonstrated through a multidrug target-engagement study. Using quantitative mass spectrometry (LC-MS/MS), we successfully identified known drug targets of seven different antibiotics in cell extracts of four AMR-related pathogens: the three Gram-negative bacteria Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa and the Gram-positive bacterium Staphylococcus aureus. The iSPP method was ultimately applied to demonstrate targetengagement of compounds derived from target-based drug discovery. We employed five small molecules targeting three enzymes in the 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway - a promising focus for anti-infective drug development. The study showcases iSPP adaptability and efficiency in identifying anti-infective drug targets, advancing early-stage drug discovery against AMR.

  • Matrix effects on the magnetic properties of a molecular spin triangle embedded in a polymeric film

    Lorenzo Tesi, Athanassios Boudalis, Katja Drerup, Mario Ruben, Joris van Slageren
    Physical Chemistry Chemical Physics, 2024, 26 (10), pp.8043-8050. ⟨10.1039/d3cp05845j⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    <div><p>Molecular triangles with competing Heisenberg interactions and significant Dzyaloshinskii-Moriya interactions (DMI) exhibit high environmental sensitivity, making them potential candidates for active elements for quantum sensing. Additionally, these triangles exhibit magnetoelectric coupling, allowing their properties to be controlled using electric fields. However, the manipulation and deposition of such complexes pose significant challenges. This work explores a solution by embedding iron-based molecular triangles in a polymer matrix, a strategy that offers various deposition methods. We investigate how the host matrix alters the magnetic properties of the molecular triangle, with specific focus on the magnetic anisotropy, aiming to advance its practical applications as quantum sensors.</p></div>

  • Restoring cellular copper homeostasis in Alzheimer disease: a novel peptide shuttle is internalized by an ATP-dependent endocytosis pathway involving Rab5- and Rab14-endosomes

    Michael Okafor, Olivia Champomier, Laurent Raibaut, Sebahat Ozkan, Naima El Kholti, Stéphane Ory, Sylvette Chasserot, Stéphane Gasman, Christelle Hureau, Peter Faller, Nicolas Vitale
    Frontiers in Molecular Biosciences, 2024, 11, pp.1355963. ⟨10.3389/fmolb.2024.1355963⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    CPPs, or Cell-Penetrating Peptides, offer invaluable utility in disease treatment due to their ability to transport various therapeutic molecules across cellular membranes. Their unique characteristics, such as biocompatibility and low immunogenicity, make them ideal candidates for delivering drugs, genes, or imaging agents directly into cells. This targeted delivery enhances treatment efficacy while minimizing systemic side effects. CPPs exhibit versatility, crossing biological barriers and reaching intracellular targets that conventional drugs struggle to access. This capability holds promise in treating a wide array of diseases, including cancer, neurodegenerative disorders, and infectious diseases, offering a potent avenue for innovative and targeted therapies, yet their precise mechanism of cell entry is far from being fully understood. In order to correct Cu dysregulation found in various pathologies such as Alzheimer disease, we have recently conceived a peptide Cu(II) shuttle, based on the αR5W4 CPP, which, when bound to Cu(II), is able to readily enter a neurosecretory cell model, and release bioavailable Cu in cells. Furthermore, this shuttle has the capacity to protect cells in culture against oxidative stress-induced damage which occurs when Cu binds to the Aβ peptide. The aim of this study was therefore to characterize the cell entry route used by this shuttle and determine in which compartment Cu is released. Pharmacological treatments, siRNA silencing and colocalization experiments with GFP-Rab fusion proteins, indicate that the shuttle is internalized by an ATP-dependent endocytosis pathway involving both Rab5 and Rab14 endosomes route and suggest an early release of Cu from the shuttle.

  • OsCYP706C2 diverts rice strigolactone biosynthesis to a noncanonical pathway branch

    Changsheng Li, Imran Haider, Jian You Wang, Pierre Quinodoz, Hernando Suarez Duran, Lucía Reyes Méndez, Robin Horber, Valentina Fiorilli, Cristina Votta, Luisa Lanfranco, Samara Correia de Lemos, Lucile Jouffroy, Baptiste Moegle, Laurence Miesch, Alain de Mesmaeker, Marnix Medema, Salim Al-Babili, Lemeng Dong, Harro Bouwmeester
    Science Advances , 2024, 10 (35), pp.eadq3942. ⟨10.1126/sciadv.adq3942⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Strigolactones exhibit dual functionality as regulators of plant architecture and signaling molecules in the rhizosphere. The important model crop rice exudes a blend of different strigolactones from its roots. Here, we identify the inaugural noncanonical strigolactone, 4-oxo-methyl carlactonoate (4-oxo-MeCLA), in rice root exudate. Comprehensive, cross-species coexpression analysis allowed us to identify a cytochrome P450, OsCYP706C2, and two methyl transferases as candidate enzymes for this noncanonical rice strigolactone biosynthetic pathway. Heterologous expression in yeast and Nicotiana benthamiana indeed demonstrated the role of these enzymes in the biosynthesis of 4-oxo-MeCLA, which, expectedly, is derived from carlactone as substrate. The oscyp706c2 mutants do not exhibit a tillering phenotype but do have delayed mycorrhizal colonization and altered root phenotype. This work sheds light onto the intricate complexity of strigolactone biosynthesis in rice and delineates its role in symbiosis and development.

  • From Electrons to Cancer : Redox Shift as a Driving Force of Tumorigenesis

    Romain Attal, Ashraf Bakkar, Frederic Bouillaud, Anne Devin, Marc Henry, Maxime Pontie, Miroslav Radman, Laurent Schwartz
    Advances in Redox Research, 2024, 10, pp.100087. ⟨10.1016/j.arres.2023.100087⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Cancer cells are very diverse but mostly share a common metabolic property: they are strongly glycolytic even though oxygen is available. Herein, the metabolic abnormalities of cancer cells are interpreted as modifications of the electric currents in redox reactions. A lower current in the electron transport chain, an increase of the concentration of reduced cofactors and a partial reversal of the tricarboxylic acid cycle are physical characteristics of several forms of cancer. The existence of electric short-circuits between oxidative branches and reductive branches of the metabolic network argue in favor of an electronic approach of cancer in the nanoscopic scale. These changes of electron flows induce a pseudo-hypoxia and the Warburg effect through succinate production and divert electrons from oxygen to biosynthetic pathways. This new look at cancer may have potential therapeutic applications.

  • Interfacial Electronic Interactions Between Ultrathin NiFe‐MOF Nanosheets and Ir Nanoparticles Heterojunctions Leading to Efficient Overall Water Splitting

    Cong Li, Wei Zhang, Yongyong Cao, Jun‐yang Ji, Zhao‐chen Li, Xu Han, Hongwei Gu, Pierre Braunstein, Jian‐ping Lang
    Advanced Science, 2024, 11 (28), pp.2401780. ⟨10.1002/advs.202401780⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Creating specific noble metal/metal-organic framework (MOF) heterojunction nanostructures represents an effective strategy to promote water electrolysis but remains rather challenging. Herein, a heterojunction electrocatalyst is developed by growing Ir nanoparticles on ultrathin NiFe-MOF nanosheets supported by nickel foam (NF) via a readily accessible solvothermal approach and subsequent redox strategy. Because of the electronic interactions between Ir nanoparticles and NiFe-MOF nanosheets, the optimized Ir@NiFe-MOF/NF catalyst exhibits exceptional bifunctional performance for the hydrogen evolution reaction (HER) (η10 = 15 mV, η denotes the overpotential) and oxygen evolution reaction (OER) (η10 = 213 mV) in 1.0 m KOH solution, superior to commercial and recently reported electrocatalysts. Density functional theory calculations are used to further investigate the electronic interactions between Ir nanoparticles and NiFe-MOF nanosheets, shedding light on the mechanisms behind the enhanced HER and OER performance. This work details a promising approach for the design and development of efficient electrocatalysts for overall water splitting.

  • Selective binding and removal of copper from biological fluids: Why are PSP ligands so efficient?

    Peter Faller
    European Journal of Biochemistry, 2024, 29 (7-8), pp.639-640. ⟨10.1007/s00775-024-02082-w⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The following comment tries to answer why the reported removal of copper from buffer, cell culture medium and cell extract by a supported chelator called phenPS is so selective and efficient. It is further argued that the family of PSP (phosphine sulfide-stabilized phosphines) chelators, due to their unique properties, have various potential future application in biology and medicine, such es chelation therapy, copper-sensors, or tools to understand copper metabolism.

  • Self-assembly of spin-labeled antimicrobial peptides magainin 2 and PGLa in lipid bilayers

    Victoria N Syryamina, Christopher Aisenbrey, Maria Kardash, Sergei A Dzuba, Burkhard Bechinger
    Biophysical Chemistry, 2024, 310, pp.107251. ⟨10.1016/j.bpc.2024.107251⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The cationic antimicrobial peptides PGLa and magainin 2 (Mag2) are known for their antimicrobial activity and synergistic enhancement in antimicrobial and membrane leakage assays. Further use of peptides in combinatory therapy requires knowledge of the mechanisms of action of both individual peptides and their mixtures. Here, electron paramagnetic resonance (EPR), double electron-electron resonance (DEER, also known as PELDOR) and electron spin echo envelope modulation (ESEEM) spectroscopies were applied to study self-assembly and localization of spin-labeled PGLa and Mag2 in POPE/POPG membranes with a wide range of peptide/lipid ratios (P/L) from ∼1/1500 to 1/50. EPR and DEER data showed that both peptides tend to organize in clusters, which occurs already at the lowest peptide/lipid molar ratio of 1/1500 (0.067 mol%). For individual peptides, these clusters are quite dense with intermolecular distances of the order of ∼2 nm. In the presence of a synergistic peptide partner, these homo-clusters are transformed into lipid-diluted hetero-clusters. These clusters are characterized by a local surface density that is several times higher than expected from a random distribution. ESEEM data indicate a slightly different insertion depth of peptides in hetero-clusters when compared to homo-clusters.

  • New Pyridine Dicarbene Ligands with Ring Expanded NHCs and their Nickel and Chromium Complexes

    Evangelos Papangelis, Katrin Pelzer, Christophe Gourlaouen, Dominique Armspach, Pierre Braunstein, Andreas A. Danopoulos, Corinne Bailly, Nikolaos Tsoureas, Dimitrios Triantafyllos Gerokonstantis
    Chemistry - An Asian Journal, In press, ⟨10.1002/asia.202400169⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The pincer complexes [NiIIBr(CNC)]Br (4), [CrIIIBr3(CNC)] (5a) and [CrIIIBr2.3Cl0.7(CNC)] (5b), where CNC = 3,3'-(pyridine-2,6-diyl)bis(1-mesityl-3,4,5,6-tetrahydropyrimidin-2-ylidene), were obtained from the novel ligand CNC, generated in situ from the precursor (CHNCH)Br2 and [NiIIBr2(PPh3)2] or from [CrII{N(SiMe3)2}2(THF)2] and (CHNCH)Br2 by aminolysis, respectively. The tetrahedrally distorted square planar (τ4 ≅ 0.30) geometry and the singlet ground state of Ni in 4 were attributed to steric constraints of the CNC backbone. Computational methods highlighted the dependence of the coordination geometry and the singlet-triplet energy difference on the size of the N-substituent of the tetrahydropyrimidine wingtips and contrasted it to the situation in 5-membered imidazolin-2-ylidene pincer analogues. The octahedral CrIII metal center in 5a and 5b is presumably formed after one electron oxidation from CH2Cl2. 4/MAO and 5a/MAO were catalysts of moderate activity for the oligomerization and polymerization of ethylene, respectively. The analogous (CH^N^CH)Br2 precursor, where (CH^N^CH) = 3,3'-(pyridine-2,6-diylbis(methylene))bis(1-mesityl-3,4,5,6-tetrahydropyrimidin-1-ium), was also prepared, however its coordination chemistry was not studied due to the inherent instability of the resulting free C^N^C ligand.

  • Joint Experimental/Theoretical Investigation of the Chemoselective Iridium(III) Metallacycle-Catalyzed Reduction of Substituted γ-Lactams by Et3SiH

    Halima Khadraoui, Chunchesh Malangi Gajendramurthy, Sara Figueirêdo de Alcântara Morais, Yann Cornaton, Hédi M’rabet, Philippe Bertani, Aïcha Arfaoui, Jean-Pierre Djukic
    Organometallics, In press, ⟨10.1021/acs.organomet.4c00044⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    This study addresses the chemoselectivity of the catalyzed reduction of a series of variously substituted γ-lactams by Et<sub>3</sub>SiH mediated by a pentamethylcyclopentadienyl iridacyclic acetonitrilo salt derived from benzo[h]quinoline. Introduction of an unsaturation within the 5-membered ring of the γ-lactam annihilates the precedence of the amide function over the capture of the silylium cation, which results in a lower chemoselectivity. Monitoring over time the catalyzed reduction of a γ-lactam bearing a carboxylic ester appendage by 1H NMR spectroscopy revealed pseudo-zero-order kinetics for the prior hydrosilylation of the lactam’s amide. This primary hydrosilylation reaction is followed by the full conversion of the formed intermediate into a pyrrolidine following a pseudo-first-order rate law. Under anhydrous conditions, the hydrosilylation of the pendant ester function occurs only in a late stage once the γ-lactam’s amide function has underwent full reduction of the carbonyl function. DFT investigations show that chemoselectivity is governed (1) by the affinity of the organic substrate for the triethylsilylium cation produced by the electrophilic activation of Et3SiH by the Ir(III) catalyst and (2) by the ability of the in situ-formed hydrido-iridium(III) intermediate to transfer hydride to the activated substrate.

  • Unravelling dispersion forces in liquid-phase enantioseparation. Part II: Planar chiral 1-(iodoethynyl)-3-arylferrocenes

    Barbara Sechi, Nutsa Tsetskhladze, Luke Connell, Alessandro Dessì, Roberto Dallocchio, Bezhan Chankvetadze, Sergio Cossu, Tamar Khatiashvili, Victor Mamane, Paola Peluso
    Analytica Chimica Acta, 2024, 1327, pp.343160. ⟨10.1016/j.aca.2024.343160⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Background: In the first part of our study on possible contribution of dispersion forces in liquid-phase enantioseparations, the enantioseparation of the axially chiral 3,3′-dibromo-5,5′-bis-ferrocenylethynyl-4,4′-bipyridine with an amylose tris(3,5-dimethylphenylcarbamate)-based chiral column appeared reasonably consistent with a picture of the enantioselective recognition based on the interplay between hydrogen bond (HB), π-π stacking and dispersion interactions. Results: In the second part of this study, we evaluated the impact of analyte and chiral stationary phase (CSP) structure, mobile phase and temperature on the enantioseparations of planar chiral 1-(iodoethynyl)-3-arylferrocenes (3-aryl = phenyl, 2-naphthyl, 4-methylphenyl, 4-t-butylphenyl) with polysaccharide-based chiral columns. The main aim of the present study was to understand the molecular bases of the high affinity observed for the second eluted (Rp)-enantiomer of some of these analytes toward amylose phenylcarbamate-based selectors when methanol-containing mixtures were used as mobile phases. Significantly, higher affinity of the second eluted (Rp)-enantiomer toward the selector could be also observed for the sterically hindered 1-(iodoethynyl)-3-(4-t-butylphenyl)ferrocene (k2 = 6.21) compared to the smaller 1-(iodoethynyl)-3-(4-methylphenyl)ferrocenes (k2 = 4.07) as 2.5% methanol was added to the n-hexane-based mobile phase. Significance: This study reasonably showed that the contribution of dispersion forces may explain the unusually large retention of the second eluted enantiomers observed for the enantioseparation of some planar chiral 1-(iodoethynyl)-3-arylferrocenes with amylose-based selectors. Based on the obtained results, we can conclude that in liquid-phase enantioseparation steric repulsion can be turned into attraction depending on the features of analyte, selector, and mobile phase.

  • Elucidating the conformational behavior and membrane-destabilizing capability of the antimicrobial peptide ecPis-4s

    Kelton Rodrigues de Souza, Lúcio O. Nunes, Evgeny Salnikov, Higor M. Mundim, Victor Hugo O. Munhoz, Luciano M. Lião, Christopher Aisenbrey, Jarbas Magalhães Resende, Burkhard Bechinger, Rodrigo Moreira Verly
    Biophysical Chemistry, 2024, 317, pp.107353. ⟨10.1016/j.bpc.2024.107353⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Here we present studies of the structure and membrane interactions of ecPis-4 s, a new antimicrobial peptide from the piscidin family, which shows a wide-range of potential biotechnological applications. In order to understand the mode of action ecPis-4 s, the peptide was chemically synthesized and structural investigations in the presence of anionic POPC:POPG (3:1, mol:mol) membrane and SDS micelles were performed. CD spectroscopy demonstrated that ecPis-4 s has a high content of helical structure in both membrane mimetic media, which is in line with solution NMR spectroscopy that revealed an amphipathic helical conformation throughout the entire peptide chain. Solid-state NMR experiments of ecPis-4 s selectively labeled with 15N/2H and reconstituted into uniaxially oriented POPC:POPG membranes revealed an ideal partition of hydrophilic and hydrophobic residues within the bilayer interface. The peptide aligns in parallel to the membrane surface, a topology stabilized by aromatic side-chain interactions of the Phe-1, Phe-2 and Trp-9 with the phospholipids. 2H NMR experiments using deuterated lipids revealed that anionic lipid accumulates in the vicinity of the cationic peptide upon peptide-membrane binding.

  • Hydration- and Temperature-Dependent Fluorescence Spectra of Laurdan Conformers in a DPPC Membrane

    Stefan Knippenberg, Kathakali De, Christopher Aisenbrey, Burkhard Bechinger, Silvio Osella
    Cells, 2024, 13 (15), pp.1232. ⟨10.3390/cells13151232⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The widely used Laurdan probe has two conformers, resulting in different optical properties when embedded in a lipid bilayer membrane, as demonstrated by our previous simulations. Up to now, the two conformers’ optical responses have, however, not been investigated when the temperature and the phase of the membrane change. Since Laurdan is known to be both a molecular rotor and a solvatochromic probe, it is subject to a profound interaction with both neighboring lipids and water molecules. In the current study, molecular dynamics simulations and hybrid Quantum Mechanics/Molecular Mechanics calculations are performed for a DPPC membrane at eight temperatures between 270K and 320K, while the position, orientation, fluorescence lifetime and fluorescence anisotropy of the embedded probes are monitored. The importance of both conformers is proven through a stringent comparison with experiments, which corroborates the theoretical findings. It is seen that for Conf-I, the excited state lifetime is longer than the relaxation of the environment, while for Conf-II, the surroundings are not yet adapted when the probe returns to the ground state. Throughout the temperature range, the lifetime and anisotropy decay curves can be used to identify the different membrane phases. The current work might, therefore, be of importance for biomedical studies on diseases, which are associated with cell membrane transformations.

  • Cobalt and Iron Cyano Benzene Bis(Dithiolene) Complexes

    António Costa, Gonçalo Lopes, João Rodrigues, Isabel Santos, Dulce Simão, Elsa Lopes, Laura Pereira, Nolwenn Le Breton, Sylvie Choua, Stéphane Baudron, Manuel Almeida, Sandra Rabaça
    Crystals, 2024, 14 (5), pp.469. ⟨10.3390/cryst14050469⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    New iron and cobalt bis(dithiolene) complexes [M(3cbdt)$_2$] (3cbdt = 3-cyanobenzene-1,2-dithiolate) were prepared as tetraphenylphosphonium (Ph4P+) salts for Fe in the monoanionic state and for Co in both the dianionic and monoanionic states: (Ph$_4$P)$_2$[Fe(III)(3cbdt)$_2$]$_2$ (1); (Ph$_4$P)$_2$[Co(III)(3cbdt)$_2$]$_2$ (2); (Ph$_4$P)$_2$[Co(II)(3cbdt)$_2$] (3). These compounds were characterized by single-crystal X-ray diffraction, cyclic voltammetry, EPR, and static magnetic susceptibility. Their properties are discussed in comparison with the corresponding complexes based on the isomer ligand 4-cyanobenzene-1,2-dithiolate (4cbdt) and 4,5-cyanobenzene-1,2-dithiolate (dcbdt), previously described by us. The Fe(III) and the Co(III) compounds (1 and 2) are isostructural, crystallizing in the triclinic P1¯ space group, with cis [M(III)(3cbdt)2] complexes dimerized in a trans fashion, and the transition metal (M = Fe, Co) has a distorted 4+1 square pyramidal coordination geometry. The Co(II) compound (3) crystallizes in the triclinic P1¯ space group, with the unit cell containing one cis and three trans inequivalent [Co(II)(3cbdt)$_2$] complexes with the transition metal (Co) and having a square planar coordination geometry. The Fe(III) complex (1) is EPR-silent, and the static magnetic susceptibility shows a temperature dependence typical of dimers of antiferromagnetically coupled S = 3/2 spins with −J/kB = 233.6 K and g = 1.8. Static magnetic susceptibility measurements of compound (3) show that this Co(II) complex is paramagnetic, corresponding to an S = ½ state with g = 2, in agreement with EPR spectra showing in solid state a hyperfine structure typical of the I(59Co) = 7/2. Static susceptibility measurements of Co(III) complex (2) showed an increase in the paramagnetic susceptibility upon warming above 100 K, which is consistent with strong AFM coupling between dimerized S = 1 units with a constant −J/kB ~1286 K.

  • Multimerization of the heptad repeat regions of the SARS-CoV 2 spike protein

    Christopher Aisenbrey, Burkhard Bechinger
    Biochimica et Biophysica Acta:Biomembranes, 2024, 1866 (2), pp.184259. ⟨10.1016/j.bbamem.2023.184259⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The heptad repeat 1 and 2 (HR1, HR2) regions in the spike protein of SARS-CoV 2 play a key role in the fusogenic mechanism of the virus with the host cell. During the fusion process they are thought to rearrange into an interdomain multimer. Functional fragments of the heptad repeat 1 and 2 regions in the spike protein of SARS-CoV 2 were chemically synthesized, labeled with nitrofurazone (NBD) and their interactions investigated by fluorescence spectroscopy. Steady state emission, fluorescence quenching, anisotropy and lifetime measurements in combination with a fluorophore dilution scheme were used to dissect multimer formation of HR1 and HR2 in quantitative detail. In addition, the investigation of the multimers by homo-FRET (via anisotropy) and lifetime measurements reveals new insights into the mechanism of fluorophore-fluorophore interactions in biological samples.

  • Continuous-Time Quantum Walk in Glued Trees: Localized State-Mediated Almost Perfect Quantum-State Transfer

    Vincent Pouthier, Lucie Pepe, Saad Yalouz
    Entropy, 2024, 26 (6), pp.490. ⟨10.3390/e26060490⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    In this work, the dynamics of a quantum walker on glued trees is revisited to understand the influence of the architecture of the graph on the efficiency of the transfer between the two roots. Instead of considering regular binary trees, we focus our attention on leafier structures where each parent node could give rise to a larger number of children. Through extensive numerical simulations, we uncover a significant dependence of the transfer on the underlying graph architecture, particularly influenced by the branching rate (M) relative to the root degree (N). Our study reveals that the behavior of the walker is isomorphic to that of a particle moving on a finite-size chain. This chain exhibits defects that originate in the specific nature of both the roots and the leaves. Therefore, the energy spectrum of the chain showcases rich features, which lead to diverse regimes for the quantum-state transfer. Notably, the formation of quasi-degenerate localized states due to significant disparities between M and N triggers a localization process on the roots. Through analytical development, we demonstrate that these states play a crucial role in facilitating almost perfect quantum beats between the roots, thereby enhancing the transfer efficiency. Our findings offer valuable insights into the mechanisms governing quantum-state transfer on trees, with potential applications for the transfer of quantum information.

  • Iodinated 4,4’‐Bipyridines with Antiproliferative Activity Against Melanoma Cell Lines

    Paola Peluso, Victor Mamane, Ylenia Spissu, Giuseppina Casu, Alessandro Dessì, Roberto Dallocchio, Barbara Sechi, Giuseppe Palmieri, Carla Rozzo
    ChemMedChem, In press, ⟨10.1002/cmdc.202300662⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    In the last decade, biological processes involving halogen bond (HaB) as a leading interaction attracted great interest. However, although bound iodine atoms are considered powerful HaB donors, few iodinated new drugs were reported so far. Recently, iodinated 4,4’‐bipyridines showed interesting properties as HaB donors in solution and in the solid state. In this paper, a study on the inhibition activity of seven halogenated 4,4’‐bipyridines against malignant melanoma (MM) cell proliferation is described. Explorative dose/response proliferation assays were first performed with three 4,4’‐bipyridines by using four MM cell lines and the normal BJ fibroblast cell line as control. Among them, the A375 MM cell line was the most sensitive, as determined by MTT assays, which was selected to evaluate the antiproliferative activity of all 4,4’‐bipyridines. Significantly, the presence of an electrophilic iodine impacted the biological activity of the corresponding compounds. The 3,3’,5,5’‐tetrachloro‐2‐iodo‐4,4’‐bipyridine showed significant antiproliferation activity against the A375 cell line, and lower toxicity on BJ fibroblasts. Through in silico studies, the stereoelectronic features of possible sites determining the bioactivity were explored. These results pave the way for the utilization of iodinated 4,4’‐bipyridines as templates to design new promising HaB‐enabled inhibitors of MM cell proliferation.

  • Radiolysis of myoglobin concentrated gels by protons: specific changes in secondary structure and production of carbon monoxide

    Nicolas Ludwig, Catherine Galindo, Clea Witjaksono, Antoine Danvin, Philippe Peaupardin, Dominique Muller, Tamon Kusumoto, Satoshi Kodaira, Rémi Barillon, Quentin Rafy
    Scientific Reports, 2024, 14 (1), pp.8625. ⟨10.1038/s41598-024-58378-z⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    While particle therapy has been used for decades for cancer treatment, there is still a lack of information on the molecular mechanisms of biomolecules radiolysis by accelerated ions. Here, we examine the effects of accelerated protons on highly concentrated native myoglobin, by means of Fourier transform infrared and UV–Visible spectroscopies. Upon irradiation, the secondary structure of the protein is drastically modified, from mostly alpha helices conformation to mostly beta elements at highest fluence. These changes are accompanied by significant production of carbon monoxide, which was shown to come from heme degradation under irradiation. The radiolytic yields of formation of denatured protein, carbon monoxide, and of heme degradation were determined, and found very close to each other: G+denatured Mb ≈ G+CO ≈ G-heme = 1.6 × 10–8 ± 0.1 × 10–8 mol/J = 0.16 ± 0.01 species/100 eV. The denaturation of the protein to a beta structure and the production of carbon monoxide under ion irradiation are phenomena that may play an important role in the biological effects of ionizing radiation.

  • Self-assembled viologens on HOPG: solid-state NMR and AFM unravel the location of the anions

    Jean Joseph, Jesus Raya, Frank Palmino, Judicaël Jeannoutot, Mathilde Berville, Jean Weiss, Frédéric Chérioux, Jennifer A. Wytko
    Nanoscale, 2024, 16 (27), pp.13089-13095. ⟨10.1039/D4NR00894D⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The controlled growth of self-assembled networks on surfaces based on viologen salts is a major scientific challenge due to their unique electronic properties. The combination of solid-state NMR spectroscopy and atomic force microscopy at ambient conditions can unravel the fine organization of the supramolecular network on a graphitic surface by positioning the counter-ions relative to the viologen cation.

  • Cooperative, Close and Remote Steric Effects on the Structural and Optical Properties of Copper(I) Bis-Phenanthroline Complexes

    Jordan L. Appleton, Lavinia Ballerini, Sylvie Choua, Christophe Gourlaouen, Romain Ruppert, Matteo Mauro
    European Journal of Inorganic Chemistry, 2024, 27, pp.e202400278. ⟨10.1002/ejic.202400278⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The synthesis as well as the structural, optical and computational characterization of seven new highly hindered homoleptic copper(I) phenanthroline complexes (namely C1-C7) is reported along with the comparison with the benchmark derivatives. Despite limited steric hindrance in direct proximity of the copper(I) coordination site, X-ray structures show that the higher hindered derivatives of the series display a more optimal tetrahedral geometry with minimal D2 symmetry distortion. A novel remote control of the geometry, with steric hindrance away from the coordination site, leads to a favorable arrangement as demonstrated by structural and computational data. In addition, electrochemical and steady-state and time-resolved photophysical studies are presented which further support the beneficial effects on the ground-state redox and excited-state properties when both remote and close steric effects are exploited. Indeed, both an increase of the photoluminescence quantum yield and a prolongation of the excited state lifetime is observed for the highly-substituted derivative C6 compared to benchmark counterparts on account of the reduced excited-state flattening distortions imparted by the additional steric constraints.Seven copper(I) phenanthroline complexes have been synthesized with steric hindrance present at and away from the coordination site, coined as remote control. This technique allowed for the synthesis of highly hindered stable homoleptic complexes which presented interesting ground and excited state properties that were corroborated by DFT calculations. image

  • Gold(I)-Catalyzed Reactions of exo-Glycals with Propargyl Esters toward C-1 Alkenyl Spirocyclopropyl Carbohydrates

    Mylène Lang, Sophie Walter, Delphine Hatey, Aurélien Blanc, Philippe Compain, Nicolas Kern
    Organic Letters, 2024, 26 (38), pp.8017-8022. ⟨10.1021/acs.orglett.4c02754⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    An atom-economic and diazo-free strategy for the construction of novel pseudo anomeric C-1 alkenyl spirocyclopropyl sugars is described. Leveraging the 1,2-migration pathway of propargyl esters under gold(I) catalysis, easily available exo-glycals undergo β-selective alkenylcarbenoid insertion in moderate to excellent yields. Preferential activation of pro-pargyl moieties and concerted [2+1] insertion are both favored through ligand choice and electron enrichment of esters. Stereocontrol using conformational bias and rearrangement are also demonstrated.

  • Metal free regio – and stereoselective semireduction of CF 3 -substituted N -allenamides

    Clément Gommenginger, Maxime Hourtoule, Marco Menghini, Laurence Miesch
    Organic & Biomolecular Chemistry, 2024, 22 (5), pp.940-944. ⟨10.1039/D3OB01859H⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    A chemoselective metal-free 1,2-and 2,3-semireduction of CF 3 -substituted N -allenamides was developed. The enamide moiety could be reduced by Et 3 SiH/BF 3 ·OEt 2 , while DBU promoted the stereoselective isomerization of the resulting allyl amides.

  • Mécanismes moléculaires autour des métaux : du vivant aux applications

    Christelle Hureau, Christophe Léger, Wadih Gattas, Isabelle Michaud-Soret, Hélène C Bertrand, Vincent Lebrun, Marine Desage-El Murr, Benoit Bertrand
    L'Actualité Chimique, 2024, 499, pp.13-14 | Publiée le 1 janvier 2024
    Article dans une revue

    Les ions métalliques offrent une diversité chimique tout à fait distincte de celle des molécules organiques et sont largement utilisés par la nature. La chimie bioinorganique est la discipline qui vise à comprendre le rôle des métaux dans les processus vitaux, à concevoir des complexes métalliques bioinspirés et à utiliser ces connaissances dans divers contextes tels que l'énergie, la santé ou l'environnement. La communauté scientifique française de chimie bioinorganique est structurée dans un groupe d'intérêt scientifique dépendant du CNRS, le FrenchBIC,et dans un groupe thématique de la Société Chimique de France, le Groupe thématique de Chimie bioinorganique. Elle expose toutes les facettes de ses recherches dans ce dossier spécial qui vous est présenté par L'Actualité Chimique.

  • Structural analysis of the NK-lysin-derived peptide NK-2 upon interaction with bacterial membrane mimetics consisting of phosphatidylethanolamine and phosphatidylglycerol

    Jörg Andrä, Christopher Aisenbrey, Udupi Seetharamacharya Sudheendra, Marc Prudhon, Gerald Brezesinski, Claudia Zschech, Regine Willumeit-Römer, Matthias Leippe, Thomas Gutsmann, Burkhard Bechinger
    Biochimica et Biophysica Acta:Biomembranes, 2024, 1866 (3), pp.184267. ⟨10.1016/j.bbamem.2023.184267⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    NK-2 is an antimicrobial peptide derived from helices 3 and 4 of the pore-forming protein of natural killer cells, NK-lysin. It has potent activities against Gram-negative and Gram-positive bacteria, fungi and protozoan parasites without being toxic to healthy human cells. In biophysical assays its membrane activities were found to require phosphatidylglycerol (PG) and phosphatidylethanolamine (PE), lipids which dominate the composition of bacterial membranes. Here the structure and activities of NK-2 in binary mixtures of different PE/PG composition were investigated. CD spectroscopy reveals that a threshold concentration of 50 % PG is needed for efficient membrane association of NK-2 concomitant with a random coil – helix transition. Association with PE occurs but is qualitatively different when compared to PG membranes. Oriented solid-state NMR spectroscopy of NK-2 specifically labelled with 15N indicates that the NK-2 helices are oriented parallel to the PG bilayer surface. Upon reduction of the PG content to 20 mol% interactions are weaker and/or an in average more tilted orientation is observed. Fluorescence spectroscopy of differently labelled lipids is in agreement of an interfacial localisation of both helices where the C-terminal end is in a less hydrophobic environment. By inserting into the membrane interface and interacting differently with PE and PG the peptides probably induce high curvature strain which result in membrane openings and rupture.

  • Transition metal-catalyzed C(sp$^2$/sp$^3$)–H α-fluoroalkenylation from gem -(bromo/di)fluoroalkenes to monofluoroalkenes: scope, mechanisms, and synthetic applications

    Essam Eliwa, Ahmed Bedair, Jean-Pierre Djukic
    Organic & Biomolecular Chemistry, 2024, 22 (34), pp.6860-6904. ⟨10.1039/D4OB01044B⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    Organofluorines have a broad range of industrial applications, such as pharmaceuticals, liquid crystal displays (LCDs), solar cells, textiles, and construction coatings, and are used in peptidomimetics, surfactants, refrigerants, anesthetics, and agrochemicals. Among them are versatile monofluoroalkenes that play a crucial role in medicinal and synthetic chemistry. The synthetic strategies for this class of molecules are limited, and prior efforts frequently suffered from poor atom- and step-economies. As a surrogate pathway for traditional cross-coupling transformations, transition metal (TM)-catalyzed C–H direct α-fluoroalkenylation overcomes these obstacles and provides straightforward techniques to access monofluoroalkenes. Nevertheless, substrate scope is still a challenge for catalysis, where gem-bromofluoroalkene synthons are applicable with electronically biased substrates such as azoles, while gem-difluoroalkene-based strategies are limited to substrates containing N-based directing groups. Herein, we review the cutting-edge fluoroalkenylation research for direct synthesis of monofluoroalkenes achieved during the last decade (2013–2023). This review is divided into two main parts: the first part discusses TM-catalyzed direct α-fluoroalkenylation via the merging of C–H activation and C(sp2)–Br cleavage strategies using gem-bromofluoroalkenes, and the second part describes the same reaction, albeit with C(sp2)–F cleavage of highly explored gem-difluoroolefins. Our review surveys all previously reported monofluoroalkenes in this research area, including their preparation techniques, stereoselectivity, and yield percentages. Furthermore, optimal conditions, reactant scope, mechanistic investigations, synthetic applications, benefits, and drawbacks of each presented methodology are critically discussed.

  • Follow-up study of Trans-C to Cis-C Thermally or Photochemically Induced Isomerisation of Terpyridine Adducts of Cycloruthenated 2-aryl-2'-pyridine Compounds

    Moussa Ali, Yann Cornaton, Jean-Pierre Djukic, Michel Pfeffer
    Inorganic Chemistry, 2024, 63 (11), pp.4867-4874. ⟨10.1021/acs.inorgchem.3c03671⟩ | Publiée le 1 janvier 2024
    Article dans une revue

    The mechanism of isomerization of the known 2-phenyl,pyridine (phpy) derivatives [Ru(phpy-$K$C,N) (MeCN-trans-N)(terpy)]PF<sub>6</sub> , 2, to [Ru(phpy-$K$C,N)( MeCN-trans-C)(terpy)]PF<sub>6</sub> (terpy = 2,2';6',2"-terpyridine), 3, at temperatures &gt; 50°C has been investigated both by $^1$H NMR spectroscopy and by DFT calculations. The photoisomerization of 2 to 3 by UV light occurred also quantitatively in MeCN after 20h at room temperature. A similar behavior to that of 2, could be established for the related compound [Ru(3-acridine-2′-C<sub>5</sub>H<sub>4</sub>N-$K$C,N)( MeCN-trans-N)( 2,2';6',2"-terpyridine)]PF<sub>6</sub> , 6, (acridine = dibenzo[b,e]pyridine or 2,3-benzoquinoline) that was obtained from the reaction between [Ru(3-acridine-2′-C<sub>5</sub>H<sub>4</sub>N-$K$C,N) (MeCN) 4 ]PF<sub>6</sub> , 4, and terpy in MeOH/MeCN at 60°C during 24 hours. Likewise to 2, the isomerization of 6 to [Ru(3-acridine-2′-C<sub>5</sub>H<sub>4</sub> N-$K$C,N)(MeCN-trans-C) (terpy)]PF<sub>6</sub> , 7, could be induced thermally (48 h at 60 °C in pure MeOH) or photochemically under UV radiations in MeCN at room temperature. A compound closely related to 7 but in which MeCN was replaced by H<sub>2</sub>O, was described earlier (Tanaka et al. Inorg. Chem. 2012, 51, 5386-539). The presence of water on this compound had a dramatic effect as far as the coordination of terpy was concerned as its isomerisation to a compound related to 6 (in which H<sub>2</sub>O instead of MeCN is coordinated to Ru) occurred indeed photochemically via irradiation with visible light.

  • A Bioinspired Cu2+-Responsive Magnetic Resonance Imaging Contrast Agent with Unprecedented Turn-On Response and Selectivity

    Katharina Zimmeter, Agnès Pallier, Bertrand Vileno, Martina Sanadar, Frédéric Szeremeta, Carlos Platas-Iglesias, Peter Faller, Célia S Bonnet, Angélique Sour
    Inorganic Chemistry, 2024, 63 (49), pp.23067 - 23076. ⟨10.1021/acs.inorgchem.4c03631⟩ | Publiée le 1 janvier 2024
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    Imaging extracellular Cu<sup>2+</sup> in vivo is of paramount interest due to its biological importance in both physiological and pathological states. Magnetic resonance imaging (MRI) is a powerful technique to do so. However, the development of efficient MRI contrast agents selective for Cu<sup>2+</sup>, particularly versus the more abundant Zn<sup>2+</sup> ions, is highly challenging. We present here an innovative Cu<sup>2+</sup> -responsive MRI contrast agent that contains a bioinspired Cu<sup>2+</sup> binding site. This sensor shows a remarkable increase in relaxivity of nearly 400% in the presence of Cu<sup>2+</sup>, which could be rationalized in terms of an increase in the hydration number of the Ln<sup>3+</sup> ion, as demonstrated by spectroscopic and relaxometric studies and supported by density functional theory calculations. Importantly, the system also shows an unprecedented selectivity for Cu<sup>2+</sup>, in particular over Zn<sup>2+</sup>. Phantom MRI images were recorded at 9.4 T to highlight the potential of such probes, which lies directly in their bioinspired design.

  • A two-step Rayleigh-Schrödinger Brillouin-Wigner approach to transition energies

    Loris Delafosse, Amr Hussein, Saad Yalouz, Vincent Robert
    Electronic Structure, 2024, 6 (1), pp.015009. ⟨10.1088/2516-1075/ad28f1⟩ | Publiée le 1 janvier 2024
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    Perturbative methods are attractive to describe the electronic structure of molecular systems because of their low-computational cost and systematically improvable character. In this work, a two-step perturbative approach is introduced combining multi-state Rayleigh-Schrödinger (effective Hamiltonian theory) and state-specific Brillouin-Wigner schemes to treat degenerate configurations and yield an efficient evaluation of multiple energies. The first step produces model functions and an updated definition of the perturbative partitioning of the Hamiltonian. The second step inherits the improved starting point provided in the first step, enabling then faster processing of the perturbative corrections for each individual state. The here-proposed two-step method is exemplified on a model-Hamiltonian of increasing complexity.

  • Synthesis of novel 1,3,4-oxadiazole-derived α-aminophosphonates/α-aminophosphonic acids and evaluation of their in vitro antiviral activity against the avian coronavirus infectious bronchitis virus

    Shaima Hkiri, Marwa Mekni-Toujani, Elvan Üstün, Karim Hosni, Abdeljelil Ghram, Soufiane Touil, Ali Samarat, David Sémeril
    Pharmaceutics, 2023, 15 (1), pp.114. ⟨10.3390/pharmaceutics15010114⟩ | Publiée le 29 décembre 2023
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    An efficient and simple approach has been developed for the synthesis of eight dialkyl/aryl[(5-phenyl-1,3,4-oxadiazol-2-ylamino)(aryl)methyl]phosphonates through the Pudovik-type reaction of dialkyl/arylphosphite with imines, obtained from 5-phenyl-1,3,4-oxadiazol-2-amine and aromatic aldehydes, under microwave irradiation. Five of them were hydrolyzed to lead to the corresponding phosphonic acids. Selected synthesized compounds were screened for their in vitro antiviral activity against the avian bronchitis virus (IBV). In the MTT cytotoxicity assay, the dose-response curve showed that all test compounds were safe in the range concentration of 540–1599 µM. The direct contact of novel synthesized compounds with IBV showed that the diethyl[(5-phenyl-1,3,4-oxadiazol-2-ylamino)(4-trifluoromethoxyphenyl)methyl]phosphonate (5f) (at 33 µM) and the [(5-phenyl-1,3,4-oxadiazol-2-ylamino)(4-trifluoromethylphenyl)methyl] phosphonic acid (6a) (at 1.23 µM) strongly inhibited the IBV infectivity, indicating their high virucidal activity. However, virus titers from IBV-infected Vero cells remained unchanged in response to treatment with the lowest non-cytotoxic concentrations of synthesized compounds suggesting their incapacity to inhibit the virus replication inside the host cell. Lack of antiviral activity might presumably be ascribed to their polarity that hampers their diffusion across the lipophilic cytoplasmic membrane. Therefore, the interactions of 5f and 6a were analyzed against the main coronavirus protease, papain-like protease, and nucleocapsid protein by molecular docking methods. Nevertheless, the novel 1,3,4-oxadiazole-based α-aminophosphonic acids and α-amino-phosphonates hold potential for developing new hygienic virucidal products for domestic, chemical, and medical uses.

  • Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzyme

    Benoît Eric Petit, Hannah Jobelius, Gabriella Ines Bianchino, Mélina Guérin, Franck Borel, Philippe Chaignon, Myriam Seemann
    Comptes Rendus. Chimie, 2023, 26 (S3), pp.1-14. ⟨10.5802/crchim.254⟩ | Publiée le 20 décembre 2023
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    Our previous research revealed that (E)-4-amino-3-methylbut-2-en-1-yl diphosphate (AMBPP) is one of the best inhibitors of IspH, a [4Fe-4S]-dependent enzyme involved in the methylerythritol phosphate pathway that is a valuable target for the discovery of new antibacterial and antiparasitic drugs as it is absent in humans. AMBPP has substantial limitations for drug development due to its poor metabolic stability. Here, we investigate the replacement of the diphosphate moiety of AMBPP by more stable mimics: sulfonate, phosphonate or phosphinophosphonate. After synthesis of the derivatives, enzymatic assays demonstrated that none of these AMBPP analogs is an efficient IspH inhibitor.

  • Theoretical and DFT Study of Atypical Pentanuclear [(iPr3P)Ni]5Hn (n = 4, 6, 8) Clusters: What are the Rules?

    Junyang Liu, Kethya Sum, Thomas Groizard, Jean-François Halet, Samuel A. Johnson
    Inorganic Chemistry, 2023, Inorganic Chemistry, ⟨10.1021/acs.inorgchem.3c03335⟩ | Publiée le 9 décembre 2023
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    The structure, bonding, and properties of a series of atypical pentanuclear nickel hydride clusters supported by electron-rich iPr3P of the type [(iPr3P)Ni]5Hn (n = 4, 6, 8; H4, H6, H8) and their anionic models where iPr3P are substituted by H– (H4′, H6′, H8′) were investigated by density functional theory (DFT) calculations. All clusters were calculated to adopt a similar square pyramidal core geometry. Calculations indicate singlet ground states with small singlet–triplet gaps for H4 and H6, similar to previously reported experimental values. Molecular orbital theory description clusters were investigated using the simplified model complexes [HNi]5Hn5– (n = 4, 6, 8; H4′, H6′, H8′). The results show that there are three skeletal electron pairs (SEPs) in H4′. The addition of two molecules of H2 to form H6′ and H8′ results in the partial or full occupation of two degenerate MOs (e* set) that give two SEPs and one SEP, respectively. Indeed, the occupation of these low-lying weakly antibonding orbitals governs the multielectron chemistry available for these clusters and plays a role in their unique reactivity.

  • Affinity of Telluronium Chalcogen Bond Donors for Lewis Bases in Solution: A Critical Experimental‐Theoretical Joint Study

    Loïc Groslambert, Yann Cornaton, Matej Ditte, Emmanuel Aubert, Patrick Pale, Alexandre Tkatchenko, Jean-Pierre Djukic, Victor Mamane
    Chemistry - A European Journal, In press, ⟨10.1002/chem.202302933⟩ | Publiée le 16 novembre 2023
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    Telluronium salts [Ar2MeTe]X were synthesized and their Lewis acidic properties towards a number of Lewis bases were addressed in solution by physical and theoretical means. The structural X‐ray diffraction analysis of 21 different salts revealed the electrophilicity of the Te centers in their interactions with anions. Telluroniums’ propensity to form Lewis pairs was investigated with OPPh3. Diffusion‐ordered NMR spectroscopy suggests that telluroniums may bind up to three OPPh3 molecules. Isotherm titration calorimetry showed that the related heats of association in 1,2‐dichloroethane depend on the electronic properties of the substituents of the aryl moiety and on the nature of the counterion. The enthalpies of first association of OPPh3 span ‐0.5 to ‐5 kcal/mol. The study of the affinity of telluroniums for OPPh3 by state‐of‐the‐art DFT and ab initio methods reveals the dominant Coulombic and dispersion interactions as well as an entropic effect favoring association in solution. Intermolecular orbital interactions between [Ar2MeTe]+ cations and OPPh3 are deemed insufficient to ensure alone the cohesion of [Ar2MeTe•Bn]+ complexes in solution (B= Lewis base). Comparison of Grimme’s and Tkatchenko’s DFT‐D4 / MBD‐vdW thermodynamics of formation of higher [Ar2MeTe•Bn]+ complexes reveals significant molecular size‐dependent divergence of the two methodologies, with MBD yielding better agreement with experiment.

  • Chiroptical activity of benzannulated N-heterocyclic carbene rhenium(I) tricarbonyl halide complexes: towards efficient circularly polarized luminescence emitters

    Valerio Giuso, Christophe Gourlaouen, Mathias Delporte-Pébay, Thomas Groizard, Nicolas Vanthuyne, Jeanne Crassous, Chantal Daniel, Matteo Mauro
    Physical Chemistry Chemical Physics, 2023, Physical Chemistry Chemical Physics : Pccp, ⟨10.1039/d3cp04300b⟩ | Publiée le 14 novembre 2023
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    The design of enantiomerically pure circularly polarized luminescent (CPL) emitters would enormously benefit from the accurate and in-depth interpretation of the chiroptical properties by means of jointly (chiroptical) photophysical measurements and state-of-the-art theoretical investigation. Herein, computed and experimental (chiro-)optical properties of a series of eight enantiopure phosphorescent rhenium(I) tricarbonyl complexes are systematically compared in terms of electronic circular dichroism (ECD) and CPL. The compounds have general formula fac-[ReX(CO)(3)(N

  • Carbohydrate-Templated Syntheses of Trifluoromethyl-Substituted MEP Analogues for the Study of the Methylerythritol Phosphate Pathway

    Basile Simonet, Vivien Herrscher, Clea Witjaksono, Philippe Chaignon, Fabien Massicot, Jean-Luc Vasse, Myriam Seemann, Jean-Bernard Behr
    Journal of Organic Chemistry, 2023, 88 (22), pp.15832-15843. ⟨10.1021/acs.joc.3c01910⟩ | Publiée le 2 novembre 2023
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    Trifluoromethyl analogues of methylerythritol phosphate (MEP) and 2-C-methyl-erythritol 2,4-cyclodiphosphate (MEcPP), natural substrates of key enzymes from the MEP pathway, were prepared starting from d-glucose as the chiral template to secure absolute configurations. The obligate trifluoromethyl group was inserted with complete diastereoselectivity using the Ruppert–Prakash nucleophile. Target compounds were assayed against the corresponding enzymes showing that trifluoro-MEP did not disrupt IspD activity, whereas trifluoro-MEcPP induced 40% inhibition of IspG at 1 mM.

  • First Use of Thiosquaramides as Polymerization Catalysts: Controlled ROP of Lactide Implicating Key Secondary Interactions for Optimal Performance

    Gaël Printz, Dmytro Ryzhakov, Christophe Gourlaouen, Béatrice Jacques, Samir Messaoudi, Françoise Dumas, Franck Le Bideau, Samuel Dagorne
    ChemCatChem, In press, ⟨10.1002/cctc.202301207⟩ | Publiée le 30 octobre 2023
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    Abstract We herein report the first use of thiosquaramides as polymerization catalysts, which are shown to be effective for the controlled ROP of lactide in the presence of an alcohol source and NEt 3 . Comparison of their catalytic performances with the less acidic squaramides are also discussed. The observed catalytic activity of variously N ‐substituted thiosquaramides suggest that a balanced NH Brønsted acidity is required for optimal performance. Most interestingly and rather unexpectedly, DFT‐supported calculations on thiosquaramide‐mediated lactide ROP catalysis suggest that secondary interactions between the thiosquaramide N ‐substituents and the incoming lactide (presently of type C‐H⋅⋅⋅ π ‐arene) are crucial for catalytic activity. Though this type of interactions is quite common in organo‐catalysis, it has rarely been evidenced to play a key role in the area of organo‐catalyzed polymerizations. Such catalyst substituents/substrate interactions may well play a significant role in the catalytic performances of various other systems.

  • Three in One: In Vitro and In Vivo Evaluation of Anticancer Activity of a Theranostic Agent that Combines Magnetic Resonance Imaging, Optical Bioimaging, and Photodynamic Therapy Capabilities

    Sarah Boumati, Angélique Sour, Valérie Heitz, Johanne Seguin, Gautier Beitz, Yusuke Kaga, Marta Jakubaszek, Johannes Karges, Gilles Gasser, Nathalie Mignet, Bich-Thuy Doan
    ACS Applied Bio Materials, 2023, 6 (11), pp.4791-4804. ⟨10.1021/acsabm.3c00565⟩ | Publiée le 20 octobre 2023
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    Cancer treatment is a crucial area of research and development, as current chemotherapeutic treatments can have severe side effects or poor outcomes. In the constant search for new strategies that are localized and minimally invasive and produce minimal side effects, photodynamic therapy (PDT) is an exciting therapeutic modality that has been gaining attention. The use of theranostics, which combine diagnostic and therapeutic capabilities, can further improve treatment monitoring through image guidance. This study explores the potential of a theranostic agent consisting of four Gd(III) DTTA complexes (DTTA: diethylenetriamine-N,N,N″,N″-tetraacetate) grafted to a meso-tetraphenylporphyrin core for PDT, fluorescence, and magnetic resonance imaging (MRI). The agent was first tested in vitro on both nonmalignant TIB-75 and MRC-5 and tumoral CT26 and HT-29 cell lines and subsequently evaluated in vivo in a preclinical colorectal tumor model. Advanced MRI and optical imaging techniques were employed with engineered quantitative in vivo molecular imaging based on dynamic acquisition sequences to track the biodistribution of agents in the body. With 3D quantitative volume computed by MRI and tumoral cell function assessed by bioluminescence imaging, we could demonstrate a significant impact of the molecular agent on tumor growth following light application. Further exhaustive histological analysis confirmed these promising results, making this theranostic agent a potential drug candidate for cancer.

  • Impact of human serum albumin on Cu II and Zn II complexation by ATSM (diacetyl-bis(N4-methylthiosemicarbazone) and a water soluble analogue

    Álvaro Martínez-Camarena, Angélique Sour, Peter Faller
    Dalton Transactions, 2023, 52 (38), pp.13758-13768. ⟨10.1039/d3dt02380j⟩ | Publiée le 3 octobre 2023
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    The chelator diacetyl-bis(N4-methylthiosemicarbazone) (ATSM) and its complexes with Cu II and Zn II are becoming increasingly investigated for medical applications such as PET imaging for anti-tumour therapy and the treatment of amyotrophic lateral sclerosis. However, the solubility in water of both the ligand and the complexes presents certain limitations for in vitro studies. Moreover, the stability of the Cu II and Zn II complexes and their metal exchange reaction against the potential biological competitor human serum albumin (HSA) has not been studied in depth. In this work it was observed that the ATSM with an added carboxylic group into the structure increases its solubility in aqueous solutions without altering the coordination mode and the conjugated system of the ligand. The poorly water-soluble Cu II-and Zn II-ATSM complexes were prevented from precipitating due to the binding to HSA. Both HSA and ATSM show a similar thermodynamic affinity for Zn II. Finally, the Cu II-competition experiments with EDTA and the water-soluble ATSM ligands yielded an apparent log Kd at pH 7.4 of about-19. When ATSM was added to Cu II-and Zn II-loaded HSA, withdrawing of Zn II was kinetically 2 favoured, but this metal is slowly substituted by the Cu II afterwards taken from HSA so that this protein could be considered as a source of Cu II for ATSM.

  • Redox processes in Cu-binding proteins: the “in-between” states in intrinsically disordered peptides

    Enrico Falcone, Christelle Hureau
    Chemical Society Reviews, 2023, 52 (19), pp.6595-6600. ⟨10.1039/d3cs00443k⟩ | Publiée le 2 octobre 2023
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    We report on a concept that some of us first described a decade ago for pure electron transfer [V. Balland, C. Hureau and J.-M. Savéant, Proc. Natl. Acad. Sci. U. S. A., 2010, 107, 17113]. In the present viewpoint, based on more recent results, we refine and extend this “in-between state” concept to explain the formation of reactive oxygen species by copper ions bound to the amyloid-β (Aβ) peptide involved in Alzheimer's disease. In such intrinsically disordered peptides, the Cu coordination is versatile due to the lack of stable folding and the presence of multiple possible binding anchors. Hence, the Cu(I) and Cu(II) ions do impose their favoured sites, with Cu(I) bound in a linear fashion between two His residues and Cu(II) in a square-based pyramid bound to Asp1 amine and carbonyl groups and two His residues in the equatorial plane. Hence a direct electron transfer is prevented and alternatively an in-between state (IBS) mechanism applies, whose description and analysis with respect to other electron transfer processes is the topic of the present viewpoint.

  • Unravelling dispersion forces in liquid-phase enantioseparation. Part I: Impact of ferrocenyl versus phenyl groups

    Barbara Sechi, Alessandro Dessì, Roberto Dallocchio, Nutsa Tsetskhladze, Bezhan Chankvetadze, Mireia Pérez-Baeza, Sergio Cossu, Giorgi Jibuti, Victor Mamane, Paola Peluso
    Analytica Chimica Acta, 2023, 1278, pp.341725. ⟨10.1016/j.aca.2023.341725⟩ | Publiée le 1 octobre 2023
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    Background: Highly ordered chiral secondary structures as well as multiple (tunable) recognition sites are the keys to success of polysaccharide carbamate-based chiral selectors in enantioseparation science. Hydrogen bonds (HBs), dipole-dipole, and π-π interactions are classically considered the most frequent noncovalent interactions underlying enantioselective recognition with these chiral selectors. Very recently, halogen, chalcogen and π-hole bonds were also identified as interactions working in polysaccharide carbamate-based selectors to promote enantiomer distinction. On the contrary, the function of dispersion interactions in this field was not explored so far. Results: The enantioseparation of chiral ferrocenes featuring chiral axis or chiral plane as stereogenic elements was performed by comparing five polysaccharide carbamate-based chiral columns, with the aim to identify enantioseparation outcomes that could be reasonably determined by dispersion forces, making available a reliable experimental data set for future theoretical studies to confirm the heuristic hypothesis. The effects of mobile phase polarity and temperature on the enantioseparation were considered, and potential recognition sites on analytes and selectors were evaluated by electrostatic potential (V) analysis and molecular dynamics (MD). In this first part, the enantioseparation of 3,3′-dibromo-5,5′-bis-ferrocenylethynyl-4,4′-bipyridine bearing two ferrocenylethynyl units linked to an axially chiral core was performed and compared to that of the analyte featuring the same structural motif with two phenyl groups in place of the ferrocenyl moieties. The results of this study showed the superiority of the ferrocenyl compared to the phenyl group, as a structural element favouring enantiodifferentiation. Significance and novelty: Even if dispersion (London) forces have been envisaged acting in liquid-phase enantioseparations, focused studies to explore possible contributions of dispersion forces with polysaccharide carbamate-based selectors are practically missing. This study allowed us to collect experimental information that support the involvement of dispersion forces as contributors to liquid-phase enantioseparation, paving the way to a new picture in this field.

  • Unitary transformations within density matrix embedding approaches: A perspective on the self-consistent scheme for electronic structure calculation

    Quentin Marécat, Benjamin Lasorne, Emmanuel Fromager, Matthieu Saubanère
    Physical Review B, 2023, 108 (15), pp.155119. ⟨10.1103/PhysRevB.108.155119⟩ | Publiée le 1 octobre 2023
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    In this work, we introduce a self-consistent scheme based on the one-body reduced density matrix (γ) formalism. A significant feature of this methodology is the utilization of an optimal unitary transformation of the Hamiltonian, determined through a self-consistently determined, unitary reflection R[γ]. This enables the extraction of all reduced properties of the system from a smaller, accurately solved embedding cluster, and the systematic reconstruction of the reduced density matrix of the system. This process ensures that both extended and embedded systems satisfy the local virial-like relation, providing quantitative insight into the correspondence between the fragment in the extended system and its embedded analog. The performance and convergence of the method, as well as the N-representability of the resulting correlated density matrix, are evaluated and discussed within the context of the one-dimensional Hubbard model, which provides exact results for a comprehensive comparison.

  • In One Fell Sweep: Modeling Exchange, Hyperfine and Dipolar Interactions from EPR Spectra of Copper(II) Spin Triangles

    Athanassios K Boudalis
    Magnetochemistry, 2023, 9 (10), pp.217. ⟨10.3390/magnetochemistry9100217⟩ | Publiée le 1 octobre 2023
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    The weak intramolecular magnetic interactions within a series of CuII3 complexes based on the trinucleating 2,4,6-tris(di-2-pyridylamino)-1,3,5-triazine (dipyatriz) ligand were investigated via Electron Paramagnetic Resonance (EPR) spectroscopy. X- and Q-band EPR spectroscopy in powders and frozen solutions were recorded and the Q-band spectra were interpreted by a multispin Hamiltonian model comprising exchange, dipolar and hyperfine interactions. The described methodology is suitable for the elucidation of weak intramolecular interactions which are not amenable to analysis via magnetic susceptibility studies.

  • Cyano benzene functionalised Ni and Cu bisdithiolene complexes

    António Costa, Gonçalo Lopes, Susana Ribeiro, Isabel Santos, Dulce Simão, Laura Pereira, Nolwenn Le Breton, Sylvie Choua, Stéphane Baudron, Manuel Almeida, Sandra Rabaça
    CrystEngComm, 2023, 25 (37), pp.5362-5371. ⟨10.1039/D3CE00782K⟩ | Publiée le 25 septembre 2023
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    New nickel and copper cyanobenzene-functionalised bisdithiolene transition metal complexes reveal a rich polymorphism and pave the way for analogous compounds with other transition metals as building blocks for molecular materials.

  • Enhanced Chiral Exciton Coupling in Neat Molecular Films

    Yoichi Sasaki, Jérôme Gautier, Minghao Li, Lydia Karmazin, Thomas Ebbesen, Cyriaque Genet
    Journal of Physical Chemistry C, 2023, 127 (37), pp.18526-18532. ⟨10.1021/acs.jpcc.3c04212⟩ | Publiée le 21 septembre 2023
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    Chiral molecule-based organic thin films are of increasing interest in optoelectronics and light technologies, where the development of isotropic neat films of chiral molecules is important for practical applications. Understanding the chiroptical responses of dense molecular aggregates often becomes challenging due to the reflection or scattering of light arising from significant reflectivity changes at the excitonic transition. Furthermore, the combination of linear birefringence (LB) and linear dichroism (LD) from micro- to mesoscopic ordering is a potential source of artifacts. Here, we report the circular dichroism (CD) of optically isotropic neat films of a new BODIPY–BINOL conjugate (O-BODIPY), which reveals a negligible LD-LB contribution as measured with both conventional methods and Mueller polarimetry. A 5-fold increase in the anisotropy factor in the neat film relative to the solution is explained by intermolecular exciton coupling. Time-dependent density functional theory calculations of possible intermolecular geometries induced in the film indicate the formation of short-ordered structures in the isotropic film with the help of combined chiral units. These results provide insight into chiral light–matter interactions, which are currently at the core of many fundamental discussions and promising chiroptical applications.

  • Binuclear Copper(I) Complexes for Near‐Infrared Light‐Emitting Electrochemical Cells

    Abdelaziz Jouaiti, Lavinia Ballerini, Hsiang‐ling Shen, Ronan Viel, Federico Polo, Nathalie Kyritsakas, Stefan Haacke, Yu‐ting Huang, Chin‐wei Lu, Christophe Gourlaouen, Hai‐ching Su, Matteo Mauro
    Angewandte Chemie International Edition, 2023, 62 (38), ⟨10.1002/anie.202305569⟩ | Publiée le 18 septembre 2023
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    Two binuclear heteroleptic Cu I complexes, namely Cu−NIR1 and Cu−NIR2, bearing rigid chelating diphosphines and π‐conjugated 2,5‐di(pyridin‐2‐yl)thiazolo[5,4‐ d ]thiazole as the bis ‐bidentate ligand are presented. The proposed dinuclearization strategy yields a large bathochromic shift of the emission when compared to the mononuclear counterparts (M1–M2) and enables shifting luminescence into the near‐infrared (NIR) region in both solution and solid state, showing emission maximum at ca. 750 and 712 nm, respectively. The radiative process is assigned to an excited state with triplet metal‐to‐ligand charge transfer ( 3 MLCT) character as demonstrated by in‐depth photophysical and computational investigation. Noteworthy, X‐ray analysis of the binuclear complexes unravels two interligand π–π‐stacking interactions yielding a doubly locked structure that disfavours flattening of the tetrahedral coordination around the Cu I centre in the excited state and maintain enhanced NIR luminescence. No such interaction is present in M1–M2. These findings prompt the successful use of Cu−NIR1 and Cu−NIR2 in NIR light‐emitting electrochemical cells (LECs), which display electroluminescence maximum up to 756 nm and peak external quantum efficiency (EQE) of 0.43 %. Their suitability for the fabrication of white‐emitting LECs is also demonstrated. To the best of our knowledge, these are the first examples of NIR electroluminescent devices based on earth‐abundant Cu I emitters.

  • Organoplatinum‐Bridged Cyclotribenzylene Dimers

    Jing Zhang, Frédéric Aribot, Jean‐claude Chambron, Nathalie Zorn, Emmanuelle Leize‐wagner, Marion Jean, Nicolas Vanthuyne, Enrique Espinosa, Emmanuel Aubert
    European Journal of Inorganic Chemistry, 2023, 26 (25), ⟨10.1002/ejic.202300284⟩ | Publiée le 1 septembre 2023
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    Cyclotribenzylenes (CTBs) combining carbonitrile (−CN) and alkyne (−C 2 H) substituents were synthesized as racemic mixtures and resolved by HPLC on chiral stationary phases. Two of these compounds were used to prepare platinum‐bridged CTB dimers, in which Pt II is bound to the CTBs via Pt−alkynyl bonds in cis configuration. The organometallic complexes were examined by mass spectrometry and NMR spectroscopy, which indicated that they were obtained as mixtures of diastereoisomers (a meso or syn form and a pair of chiral or anti forms) when racemic CTBs were used. Enantiomerically pure complexes were prepared from resolved CTBs, which allowed us to distinguish the NMR signals of the chiral and meso forms in the diastereoisomeric mixtures. In certain conditions, the platinum complexes played the role of a pincer π‐alkynyl ligand for Cu(I) coming from the copper iodide used as a synthetic auxiliary. The Cu + cations could be easily removed by treatment with NaCN, affording the mononuclear bis‐cyclotribenzylene complexes. These compounds failed to lead to metallo‐cryptophanes by coordination of two [M(dppp)] 2+ complex subunits (M=Pd, Pt; dppp=1,3‐bis(diphenylphosphino)propane), each to two carbonitrile substituents belonging to different CTBs, pointing to the superiority of the one pot self‐assembly processes for the preparation of metallo‐cryptophanes.

  • Theoretical spectroscopy for unraveling the intensity mechanism of the optical and photoluminescent spectra of chiral Re(I) transition metal complexes

    Rami Shafei, Ai Hamano, Christophe Gourlaouen, Dimitrios Maganas, Keiko Takano, Chantal Daniel, Frank Neese
    The Journal of Chemical Physics, 2023, 159 (8), ⟨10.1063/5.0153742⟩ | Publiée le 28 août 2023
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    In this work, we present a computational study that is able to predict the optical absorption and photoluminescent properties of the chiral Re(I) family of complexes [fac-ReX(CO)3L], where X is either Cl or I and L is N-heterocyclic carbene extended with π-conjugated [5]-helicenic unit. The computational strategy is based on carefully calibrated time dependent density functional theory calculations and operates in conjunction with an excited state dynamics approach to treat in addition to absorption (ABS) and photoluminescence (PL), electronic circular dichroism (ECD), and circularly polarized luminescence (CPL) spectroscopies, respectively. The employed computational approach provides, an addition, access to the computation of phosphorescence rates in terms of radiative and non-radiative relaxation processes. The chosen molecules consist of representative examples of non-helicenic (NHC) and helicenic diastereomers. The agreement between theoretical and experimental spectra, including absorption (ABS, ECD) and emission (PL, CPL), is excellent, validating a quantitative interpretation of the spectral features on the basis of natural transition orbitals and TheoDore analyses. It is demonstrated that across the set of studied Re(I) diastereomers, the emission process in the case of NHC diastereomers is metal to ligand charge transfer in nature and is dominated by the easy-axis anisotropy of the emissive excited multiplet. On the contrary, in the cases of the helicenic diastereomers, the emission process is intra ligand charge transfer in nature and is dominated by the respective easy-plane anisotropy of the emissive excited multiplet. This affects remarkably the photoluminescent properties of the molecules in terms of PL and CPL spectral band shapes, spin-vibronic coupling, relaxation times, and the respective quantum yields. Spin-vibronic coupling effects are investigated at the level of the state-average complete active space self-consistent field in conjunction with quasi-degenerate second order perturbation theory. It is in fact demonstrated that a spin-vibronic coupling mechanism controls the observed photophysics of this class of Re(I) complexes.

  • Hierarchical Porous WO 3 @SiO 2 Self-Standing Monolithic Catalysts and Their Efficient Cycling “Cosolvent-Free” Friedel–Crafts Alkylation/Acylation Catalytic Properties

    Antoine Vardon, Elodie Layan, Frédéric Louërat, Frédéric Nallet, Ahmed Bentaleb, Marie-Anne Dourges, Thierry Toupance, Eric Laurichesse, Clément Sanchez, Nathalie Parizel, Charles Sidhoum, Walid Baaziz, Ovidiu Ersen, Thierry Pigot, Rénal Backov
    Chemistry of Materials, 2023, 35 (16), pp.6502-6516. ⟨10.1021/acs.chemmater.3c01479⟩ | Publiée le 22 août 2023
    Article dans une revue

    Taking advantage of tungsten oxide inherent Brønsted–Lewis acidity, the first series of WO3–SiO2(HIPE) monolithic (MUB-104(x) series) catalysts bearing multiscale porosity have been designed through integrative chemistry. At the microscopic length scale, beyond X-ray diffraction (XRD) revealing the WO3 monoclinic structure, local electron spin resonance (ESR) spectroscopy addresses g values clearly located at the frontier between extended WO3 phases and polyanion clusters, in agreement with scanning transmission electron microscopy high-angle annular dark field (STEM-HAADF) investigations. NH3-TPD shows that when the tungsten loading is increased from 10 wt % for MUB-104(1) to 24 wt % for MUB-104(3), the amount of acidic sites significantly decreases from 0.35 to 0.08 mmol of NH3 g–1, respectively, in agreement with the particle sizes. The MUB-104(x) series offers efficient cosolvent-less heterogeneous cycling catalysis toward both Friedel–Crafts alkylation and acylation syntheses. MUB-104(1) carries the highest turnover number (TON) of 121 and turnover frequency (TOF) of 20 h–1, while for acylation, MUB-104(1) carries the highest TON of 117 and TOF of 26 h–1. Besides, we find out that the catalysts offer good selectivity, where 30/70% of ortho- and para-substituted alkylated products are obtained. Considering the acylation reaction, the selectivity is even higher, reaching 100% toward the para-substituted acylated product. The catalyst, due to its intrinsic monolithic character, can be easily extracted from the reactive media, recycled, and re-employed further.

  • Electrophilic Si−H Activation by Acetonitrilo Benzo[ h ]quinoline Iridacycles: Influence of Electronic Effects in Catalysis

    Masoumeh Behzadi, Chunchesh Malangi Gajendramurthy, Mélanie Boucher, Christophe Deraedt, Yann Cornaton, Lydia Karmazin, Nathalie Gruber, Philippe Bertani, Jean‐pierre Djukic
    Chemistry - A European Journal, 2023, 29 (43), ⟨10.1002/chem.202300811⟩ | Publiée le 1 août 2023
    Article dans une revue

    Abstract The performance of six newly synthesized benzo[ h ]quinoline‐derived acetonitrilo pentamethylcyclopentadienyl iridium(III) tetrakis(3,5‐bis‐trifluoromethylphenyl)borate salts bearing different substituents −X (−OMe, −H, −Cl, −Br, −NO 2 and −(NO 2 ) 2 ) on the heterochelating ligand were evaluated in the dehydro‐ O ‐silylation of benzyl alcohol and the monohydrosilylation of 4‐methoxybenzonitrile by Et 3 SiH, two reactions involving the electrophilic activation of the Si−H bond. The benchmark shows a direct dependence of the catalytic efficiency with the electronic effect of −X, which is confirmed by theoretical assessment of the intrinsic silylicities Π of hydridoiridium(III)‐silylium adducts and by the theoretical evaluation of the propensity of hydridospecies to transfer the hydrido ligand to the activated substrate. The revisited analysis of the Ir−Si−H interactions shows that the most cohesive bond in hydridoiridium(III)‐silylium adducts is the Ir−H one, while the Ir−Si is a weak donor‐acceptor dative bond. The Si…H interaction in all the cases is noncovalent in nature and dominated by electrostatics confirming the heterolytic cleavage of the hydrosilane's Si−H bond in this key catalytically relevant species.

  • Method development for the LC-MS/MS determination of C60 and C70 fullerenes and their functionalized derivatives in airborne particulate matter, settled dust and soot

    Mathieu Galmiche, Eden Esslinger, Olivier Delhomme, Philippe Schaeffer, Estelle Motsch, Emmanuelle Leize-Wagner, Yannis-Nicolas François, Maurice Millet
    International Journal of Mass Spectrometry, 2023, 490, pp.117072. ⟨10.1016/j.ijms.2023.117072⟩ | Publiée le 1 août 2023
    Article dans une revue

    This is a PDF file of an article that has undergone enhancements after acceptance, such as the addition of a cover page and metadata, and formatting for readability, but it is not yet the definitive version of record. This version will undergo additional copyediting, typesetting and review before it is published in its final form, but we are providing this version to give early visibility of the article. Please note that, during the production process, errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.

  • Analytical descriptions of (multiple-contact) cross-polarization dynamics and spin-lattice relaxation in solid alanine

    Jérôme Hirschinger, Jesus Raya
    Journal of Magnetic Resonance Open, 2023, 16-17, pp.100128. ⟨10.1016/j.jmro.2023.100128⟩ | Publiée le 22 juillet 2023
    Article dans une revue

    In this work, several exact and approximate analytical solutions to the quantum master equation are derived using both classical and non-classical coupling models to describe the kinetics of Hartmann-Hahn cross-polarization (HHCP) and multiple-contact CP (MC-CP). Moreover, the analytical solution originally obtained by Naito and McDowell [J. Chem. Phys. 84 (1986) 4181.] is shown to be incorrect and the different regimes of spin diffusion and relaxation are characterized by the amplitude of the second stage of the HHCP dynamics and the HHCP/MC-CP crossing time. The analysis of the 1H-13C HHCP and MC-CP dynamics together with (Lee-Goldburg) 1H relaxation experimental data provides a consistent picture of spin dynamics in solid alanine and explains the apparent discrepancies previously observed between and relaxation measurements. The CH and CH3 protons relax as expected via spin diffusion towards the NH3 protons but the assumption of common proton spin temperature, in which the bottleneck of relaxation is at the NH3 sites, generally valid for relaxation breaks down for relaxation. A diffusion-limited situation in which nuclear Zeeman energy is transferred to the lattice faster than can be supplied by spin diffusion is observed instead.

  • A unified density matrix functional construction of quantum baths in density matrix embedding theory beyond the mean-field approximation

    Sajanthan Sekaran, Oussama Bindech, Emmanuel Fromager
    The Journal of Chemical Physics, 2023, 159 (3), ⟨10.1063/5.0157746⟩ | Publiée le 21 juillet 2023
    Article dans une revue

    The equivalence in one-electron quantum baths between the practical implementation of density matrix embedding theory (DMET) and the more recent Householder-transformed density matrix functional embedding theory has been shown previously in the standard but special case where the reference full-size (one-electron reduced) density matrix, from which the bath is constructed, is idempotent [S. Yalouz et al., J. Chem. Phys. 157, 214112 (2022)]. We prove mathematically that the equivalence remains valid when the density matrix is not idempotent anymore, thus allowing for the construction of correlated (one-electron) quantum baths. A density-matrix functional exactification of DMET is derived within the present unified quantum embedding formalism. Numerical examples reveal that the embedding cluster can be quite sensitive to the level of density-matrix functional approximation used for computing the reference density matrix.

  • Kinetic and thermodynamic sorption studies of Fe(III) and Zr(IV) by DFO@Purolite, a desferrioxamine B based chelating resin

    Giancarla Alberti, Camilla Zanoni, Vittorio Losi, Sara Rovertoni, Lisa Rita Magnaghi, Osian Fonquernie, Stéphane Brandès, Agnese Amati, Jean-Claude Chambron, Nicolas Maudoux, Raffaela Biesuz, Michel Meyer
    New Journal of Chemistry, 2023, 47 (28), pp.13436-13449. ⟨10.1039/d3nj00903c⟩ | Publiée le 17 juillet 2023
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    This paper presents the characterization of a novel solid-phase sorbent for iron(III) and zirconium(IV) obtained by the functionalization of a commercial epoxy methacrylate resin (Purolites ECR8209) with desferrioxamine B (DFO). The sorption properties of the solid material, named DFO@Purolite, towards Fe(III) and Zr(IV) were investigated in detail. In particular, the sorption kinetics, isotherms and sorption profiles as a function of the solution’s pH were studied. The stoichiometry and the complexation constants of both cations with the active sites of the sorbent were determined by applying the Gibbs– Donnan model, i.e., the model used to explain the protonation and the metal sorption on ion exchange resins. While the chelating properties of the solid material investigated herein are in good agreement with those of Fe(III)/DFO and Zr(IV)/DFO previously determined in homogeneous aqueous solutions, the solid/liquid extraction studies further allow to ascertain the speciation model for the latter system that is still subjected to controversy in the literature.

  • TBAF-Promoted Carbanion-Mediated Sulfonamide Cyclization of CF 3 -substituted N-Allenamides: an Access to Fluorinated γ-Sultams

    Clément Gommenginger, Yongxiang Zheng, Daniele Maccarone, Ilaria Ciofini, Laurence Miesch
    Organic Chemistry Frontiers, 2023, 10, pp.4055-4060. ⟨10.1039/x0xx00000x⟩ | Publiée le 6 juillet 2023
    Article dans une revue

    Upon treatment with TBAF, CF3-substituted N-allenamides were transformed into γ-sultams. Cyclic sulfonamides bearing an ene-gem-difluorinated tether could be obtained by addition of acetic acid to the ammonium salt whereas TBAF alone provided the correspondingtrifluorinated ethyl sultams. A combined experimental and computationnal mechanistic study suggested that this transformation involves a 5-endo-dig cyclization on the ene-ynamide generated in situ.

  • [Ru(bpy)3]2+-functionalized polydopamine-coated polyurethane foam as an easily reusable macroscopic heterogeneous catalyst for visible-light photocatalysis

    Han Peng, Thierry Romero, Vasiliki Papaefthimiou, Philippe Bertani, Vincent Ritleng
    Molecular Catalysis, 2023, 545, pp.113183. ⟨10.1016/j.mcat.2023.113183⟩ | Publiée le 1 juillet 2023
    Article dans une revue

    An easy-to-handle, highly reusable and efficient [Ru(bpy)3] 2+-based heterogeneous photocatalyst was obtained by post-functionalization of a polydopamine-coated open cell polyurethane foam (PDA@PUF) via a silanization process of the mussel-inspired adhesive layer with 3-(triethoxysilyl)propan-1-amine (APTES), followed by an EDC-mediated coupling with [2,2'-bipyridine]-4-carboxylic acid and further complexation with [Ru(bpy)2Cl2] (bpy = 2,2'-bypyridine). The successful covalent grafting of APTES on the PDA layer of PUF and functionalization all over the foam surface with [Ru(bpy)3] 2+ was suggested by 29Si CP-MAS NMR, XPS, ICP-AES and SEM-EDX. The macroscopic photocatalyst proved effective in model benzylic amine homocouplings and cross dehydrogenative couplings under visible-light irradiation and molecular oxygen, showing good functional group tolerance and excellent reusability in an easy-to-carry "dip-and-play" mode for at least six runs. Impressively, an improvement of the catalytic performances was even observed in both reactions, which most likely results from a modification of the uppermost layer of polydopamine throughout the successive cycles that renders the photocatalyst more accessible.

  • Photoactivatable Liposomes for Blue to Deep Red Light-Activated Surface Drug Release: Application to Controlled Delivery of the Antitumoral Drug Melphalan

    Anaïs Brion, Juliane Chaud, Maxime Klimezak, Frédéric Bolze, Laura Ohlmann, Jérémie Léonard, Stefan Chassaing, Benoît Frisch, Antoine Kichler, Béatrice Heurtault, Alexandre Specht
    Bioconjugate Chemistry, 2023, 34 (7), pp.1304-1315. ⟨10.1021/acs.bioconjchem.3c00197⟩ | Publiée le 1 juillet 2023
    Article dans une revue

    Liposome-based nanoparticles able to release, via a photolytic reaction, a payload anchored at the surface of the phospholipid bilayer were prepared. The liposome formulation strategy uses an original drug-conjugated blue light-sensitive photoactivatable coumarinyl linker. This is based on an efficient blue light-sensitive photolabile protecting group modified by a lipid anchor, which enables its incorporation into liposomes, leading to blue to green light-sensitive nanoparticles. In addition, the formulated liposomes were doped with triplet–triplet annihilation upconverting organic chromophores (red to blue light) in order to prepare red light sensitive liposomes able to release a payload, by upconversion-assisted photolysis. Those light-activatable liposomes were used to demonstrate that direct blue or green light photolysis or red light TTA-UC-assisted drug photolysis can effectively photorelease a drug payload (Melphalan) and kill tumor cells in vitro after photoactivation.

  • Bacterial physiology highlighted by the δ13C fractionation of bacteriohopanetetrol isomers

    Rachel Schwartz-Narbonne, Philippe Schaeffer, Sabine K Lengger, Jerome Blewett, D. Martin Jones, Estelle Motsch, Andrew Crombie, Mike S.-M. Jetten, Deirdre Mikkelsen, Philippe Normand, Guylaine H.L. Nuijten, Richard D Pancost, Darci Rush
    Organic Geochemistry, 2023, 181, pp.104617. ⟨10.1016/j.orggeochem.2023.104617⟩ | Publiée le 1 juillet 2023
    Article dans une revue

    Lipid biomarkers, such as the various bacteriohopanetetrol (BHT) isomers studied here, are useful tools in tracing bacterially mediated nitrogen and carbon cycle processes affecting greenhouse gas emissions, including the anaerobic oxidation of ammonia. Three BHT isomers occur commonly in the environment. By gas chromatography, BHT-34S elutes first; it is produced by numerous bacteria. The two later eluting isomers are more constrained in their origin. The marine anammox bacteria ‘Ca. Scalindua’ is the only known producer of a BHT isomer of unknown stereochemistry (BHT-x), making BHT-x a diagnostic biomarker in anoxic marine settings. The BHT-34R isomer is produced by three freshwater aerobic heterotrophic producers (Frankia spp., Acetobacter pasteurianus, and Komagataeibacter xylinus), a freshwater serine-cycle (Type II) methanotroph (Methylocella palustris), and the freshwater anammox ‘Ca. Brocadia’, which makes the detection of freshwater anammox using BHT-34R more complicated. We investigated whether the source of BHT-34R in freshwater environments could be ascertained via its δ13C value. We used conventional on-column gas chromatography-combustion-isotope ratio mass spectrometry (GC-C-IRMS) (as opposed to high temperature GC-C-IRMS) to determine the δ13C composition of acetylated BHT isomers in cultured bacteria and bacterial enrichments. We combined these with bulk biomass and substrate δ13C compositions to establish carbon isotopic fractionation factors. The two anammox genera had large fractionation factors from dissolved inorganic carbon (DIC) to biomass (Δ13Cbiomass – DIC = –43.8 to –26.4 ‰) and to BHTs (Δ13CBHT – DIC = –53.8 to –38.2 ‰), which clearly distinguished them from the freshwater aerobic heterotrophic producers (Δ13Cbiomass – substrate = –2.3 to –0.1 ‰; Δ13CBHT – substrate = –12.8 to 5.2 ‰). Methylocella assimilated mainly carbon from DIC, rather than from methane, into its biomass and BHT, and previous work suggested this assimilation comes with relatively small fractionation. Thus, in peatlands, the BHT δ13C values of Methylocella would not reflect the low δ13C values of biogenic methane. Consequently, the presence of BHT-34R with low δ13C values relates to ‘Ca. Brocadia’ and presents a novel tool to trace anammox in freshwater environments.

  • Lost world of complex life and the late rise of the eukaryotic crown

    Jochen J Brocks, Benjamin J Nettersheim, Pierre Adam, Philippe Schaeffer, Amber J M Jarrett, Nur Güneli, Tharika Liyanage, Lennart M van Maldegem, Christian Hallmann, Janet M Hope
    Nature, 2023, 618 (7966), pp.767-773. ⟨10.1038/s41586-023-06170-w⟩ | Publiée le 22 juin 2023
    Article dans une revue

    Eukaryotic life appears to have flourished surprisingly late in the history of our planet. This view is based on the low diversity of diagnostic eukaryotic fossils in marine sediments of mid-Proterozoic age (~1,600 to 800 million years (Ma) ago) and an absence of steranes, the molecular fossils of eukaryotic membrane sterols 1,2. This scarcity of eukaryotic remains is difficult to reconcile with molecular clocks that suggest that the last eukaryotic common ancestor (LECA) already emerged ~1200 to >1,800 Ma ago. LECA, in turn, must have been preceded by stem-group eukaryotic forms by several hundred million years. We report the discovery of abundant protosteroids in sedimentary rocks of mid-Proterozoic age. These primordial compounds remained unnoticed because their structures represent early intermediates of the modern sterol biosynthetic pathway, as famously predicted by Konrad Bloch4. The protosteroids reveal an ecologically prominent ‘Protosterol Biota’ that was widespread and abundant in aquatic environments from at least 1,640 to ~800 Ma ago and that likely comprised ancient protosterol-producing bacteria and deep-branching stem group eukaryotes. Modern eukaryotes started to rise in the Tonian period (1,000 to 720 Ma), fuelled by the proliferation of red algae (rhodophytes) by ~800 Ma. This ‘Tonian Transformation’ emerges as one of the most profound ecological turning points in our planet’s history.

  • Symmetry‐Broken Charge‐Transfer Excited State in Homoleptic Zinc(II) Imidazo[1,2‐ a ]pyridine Complexes

    Valerio Giuso, Elise Jouaiti, Cristina Cebrián, Sabrina Parant Aury, Nathalie Kyritsakas, Christophe Gourlaouen, Matteo Mauro
    ChemPhotoChem, 2023, 7 (8), ⟨10.1002/cptc.202300092⟩ | Publiée le 12 juin 2023
    Article dans une revue

    Abstract A series of four homoleptic cationic Zn II complexes ( Zn1 – Zn4 ) coordinated by two substituted bis ‐imidazo[1,2‐ a ]pyridine (ImPy) ligands ( L1 – L4 ) is herein presented. The ligands are functionalized with either electron acceptor or donor functional groups at the C6 positions of the two ImPy moieties. In DMF solution, all of the complexes display intense near‐UV to blue emission (λ em =379–450 nm) with high photoluminescence quantum yields (PLQY) up to 0.50 and short‐lived excited states. Additionally, complex Zn4 , containing the ‐NPh 2 functionalized ligand, displays an interesting solvatochromic behavior. The absorption spectrum is characterized by electronic transitions with mainly ligand‐centered ( 1 LC) and intraligand charge‐transfer ( 1 ILCT) character, which involves a symmetric electron density redistribution at Franck‐Condon (FC). In stark contrast, the subsequent excited‐state dynamics relaxes the molecular symmetry and allows symmetry‐breaking hole‐electron pair redistribution on the bichromophoric system. As a consequence, an efficient radiative de‐excitation process takes place that is ascribed to a singlet‐manifold excited state with symmetry‐broken charge transfer ( 1 SBCT) character, as supported by an in‐depth photophysical, electrochemical and time‐dependent density functional theory (TD‐DFT) investigation. Remarkably, the 1 SBCT nature provides structureless green photoluminescence in the solid state (λ em up to 520 nm for Zn4 ), which is rather uncommon for Zn II complexes.

  • Evidence for and Evaluation of Fluorine-Tellurium Chalcogen Bonding

    Robin Weiss, Emmanuel Aubert, Loic Groslambert, Patrick Pale, Victor Mamane
    Chemical Science, 2023, ⟨10.1039/D3SC00849E⟩ | Publiée le 5 juin 2023
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    In the field of noncovalent interactions, chalcogen bonding (ChB) involving the tellurium atom is currently attracting much attention in supramolecular chemistry and in catalysis. However, as a prerequisite for its application, the ChB should be studied in solution to assess its formation and, if possible, to evaluate its strength. In this context, new tellurium derivatives bearing CH 2 F and CF 3 groups were designed to exhibit Te•••F ChB and were synthesized in good to high yields. In both types of compounds, Te•••F interactions were characterized in solution by combining 19 F, 125 Te and HOESY NMR techniques. These Te•••F ChBs were shown to contribute to the overall J Te-F coupling constants (94-170 Hz) measured in the CH 2 F-and CF 3based tellurium derivatives. Finally, a variable temperature NMR study allowed us to approximate the energy of the Te•••F ChB, from 3 kJ/mol for the compounds for weak Te -holes to 11 kJ/mol for Te -holes activated by the presence of strong electron withdrawing substituents. .

  • Syntheses and Electrochemical and EPR Studies of Porphyrins Functionalized with Bulky Aromatic Amine Donors

    Mary-Ambre Carvalho, Khalissa Merahi, Julien Haumesser, Ana Mafalda Vaz Martins Pereira, Nathalie Parizel, Jean Weiss, Maylis Orio, Vincent Maurel, Laurent Ruhlmann, Sylvie Choua, Romain Ruppert
    Molecules, 2023, 28 (11), pp.4405. ⟨10.3390/molecules28114405⟩ | Publiée le 1 juin 2023
    Article dans une revue

    A series of nickel(II) porphyrins bearing one or two bulky nitrogen donors at the meso positions were prepared by using Ullmann methodology or more classical Buchwald–Hartwig amination reactions to create the new C-N bonds. For several new compounds, single crystals were obtained, and the X-ray structures were solved. The electrochemical data of these compounds are reported. For a few representative examples, spectroelectrochemical measurements were used to clarify the electron exchange process. In addition, a detailed electron paramagnetic resonance (EPR) study was performed to estimate the extent of delocalization of the generated radical cations. In particular, electron nuclear double resonance spectroscopy (ENDOR) was used to determine the coupling constants. DFT calculations were conducted to corroborate the EPR spectroscopic data.

  • Evaluation of Candidate Theranostics for227Th/89Zr Paired Radioimmunotherapy of Lymphoma

    Diane S Abou, Mark Longtine, Amanda Fears, Nadia Benabdallah, Ryan Unnerstall, Hannah Johnston, Kyuhwan Shim, Abbie Hasson, Hanwen Zhang, David Ulmert, Floriane Mangin, Serife Ozen, Laurent Raibaut, Stéphane Brandès, Michel Meyer, Jean-Claude Chambron, David S Tatum, Darren Magda, Richard L Wahl, Daniel L J Thorek
    Journal of Nuclear Medicine, 2023, 64, pp.1062 - 1068. ⟨10.2967/jnumed.122.264979⟩ | Publiée le 4 mai 2023
    Article dans une revue

    Th is a promising radioisotope for targeted a-particle therapy. It produces 5 a-particles through its decay, with the clinically approved 223 Ra as its first daughter. There is an ample supply of 227 Th, allowing for clinical use; however, the chemical challenges of chelating this large tetravalent f-block cation are considerable. Using the CD20-targeting antibody ofatumumab, we evaluated chelation of 227 Th 41 for a-particle-emitting and radiotheranostic applications. Methods: We compared 4 bifunctional chelators for thorium radiopharmaceutical preparation: S-2-(4-Isothiocyanatobenzyl)-1,4,7,10-tetraazacyclododecane tetraacetic acid (p-SCN-Bn-DOTA), 2-(4-isothicyanatobenzyl)-1,2,7,10,13-hexaazacyclooctadecane-1,4,7,10,13,16-hexaacetic acid (p-SCN-Bn-HEHA), p-isothiacyanatophenyl-1-hydroxy-2-oxopiperidine-desferrioxamine (DFOcyclo*-p-Phe-NCS), and macrocyclic 1,2-HOPO N-hydroxysuccinimide (L804-NHS). Immunoconstructs were evaluated for yield, purity, and stability in vitro and in vivo. Tumor targeting of the lead 227 Thlabeled compound in vivo was performed in CD20-expressing models and compared with a companion 89 Zr-labeled PET agent. Results: 227 Th-labeled ofatumumab-chelator constructs were synthesized to a radiochemical purity of more than 95%, excepting HEHA. 227 Th-HEHAofatumumab showed moderate in vitro stability. 227 Th-DFOcyclo*-ofatumumab presented excellent 227 Th labeling efficiency; however, high liver and spleen uptake was revealed in vivo, indicative of aggregation. 227 Th-DOTA-ofatumumab labeled poorly, yielding no more than 5%, with low specific activity (0.08 GBq/g) and modest long-term in vitro stability (,80%). 227 Th-L804-ofatumumab coordinated 227 Th rapidly and efficiently at high yields, purity, and specific activity (8 GBq/g) and demonstrated extended stability. In vivo tumor targeting confirmed the utility of this chelator, and the diagnostic analog, 89 Zr-L804-ofatumumab, showed organ distribution matching that of 227 Th to delineate SU-DHL-6 tumors. Conclusion: Commercially available and novel chelators for 227 Th showed a range of performances. The L804 chelator can be used with potent radiotheranostic capabilities for 89 Zr/ 227 Th quantitative imaging and a-particle therapy.

  • Deciphering the Ground State of a C 3 -Symmetrical Blatter-type Triradical by CW and pulse EPR Spectroscopy

    Athanassios Boudalis, Christos Constantinides, Nicolas Chrysochos, Raanan Carmieli, Gregory Leitus, Andreas Kourtellaris, Daniel Lawson, Panayiotis Koutentis
    Journal of Magnetic Resonance, 2023, 349, pp.107406. ⟨10.1016/j.jmr.2023.107406⟩ | Publiée le 1 avril 2023
    Article dans une revue

    3,3',3''-(Benzene-1,3,5-triyl)tris(1-phenyl-1H-benzo[e][1,2,4]triazin-4-yl) (1) is a C 3-symmetrical triradical comprised of three Blatter radical units connected at the 1, 3, 5 positions of a central trimethylenebenzene core. This triradical has an excellent air, moisture, and thermal stability. Single-crystal XRD indicates that triradical 1 adopts a propeller-like geometry with the benzotriazinyl moieties twisted by 174.1(2)° and packs in 1D chains along the c axis to form an extensive network of weak intermolecular interactions. Frozen solution continuous wave (CW) EPR spectra and variable-temperature field-sweep echo-detected (FSED) spectra revealed an intramolecular ferromagnetic exchange within the spin system, supporting a quartet S = 3/2 ground state. DFT calculations further supported these experimental findings.

  • Modifications of Tanabe-Sugano d6 Diagram Induced by Radical Ligand Field: Ab Initio Inspection of a Fe(II)-Verdazyl Molecular Complex

    Pablo Roseiro, Saad Yalouz, David J R Brook, Nadia Ben Amor, Vincent Robert
    Inorganic Chemistry, 2023, 62, pp.5737 - 5743. ⟨10.1021/acs.inorgchem.3c00275⟩ | Publiée le 27 mars 2023
    Article dans une revue

    Quantum entanglement between the spin states of a metal center and radical ligands is suggested in an iron(II) [Fe(dipyvd) 2 ] 2+ compound (dipyvd = 1-isopropyl-3,5-dipyridil-6-oxoverdazyl). Wave function ab initio (Difference Dedicated Configuration Interaction, DDCI) inspections were carried out to stress the versatility of local spin states. We named this phenomenon excited state spinmerism, in reference to our previous work (see Roseiro et al., ChemPhysChem 2022, e202200478) where we introduced the concept of spinmerism as an extension of mesomerism to spin degrees of freedom. The construction of localized molecular orbitals allows for a reading of the wave functions and projections onto the local spin states. The low-energy spectrum is well-depicted by a Heisenberg picture. A 60 cm −1 ferromagnetic interaction is calculated between the radical ligands with the S total = 0 and 1 states largely dominated by a local low-spin S Fe = 0. In contrast, the higher-lying S total = 2 states are superpositions of the local S Fe = 1 (17%, 62%) and S Fe = 2 (72%, 21%) spin states. Such mixing extends the traditional picture of a high-field d 6 Tanabe-Sugano diagram. Even in the absence of spin−orbit coupling, the avoided crossing between different local spin states is triggered by the field generated by radical ligands. This puzzling scenario emerges from versatile local spin states in compounds which extend the traditional views in molecular magnetism.

  • Le site de l’âge du Bronze moyen de Berstett Langenberg (Bas-Rhin), approches croisées

    Matthieu Michler, Ginette Auxiette, Florent Jodry, Nadia Tarifa-Mateo, Pierre Adam, Philippe Schaeffer, Clément Féliu, Cécile Véber
    Gallia Préhistoire – Préhistoire de la France dans son contexte européen, 2023, Varia, 63, ⟨10.4000/galliap.3554⟩ | Publiée le 11 mars 2023
    Article dans une revue

    Fouillé en 2018 dans le cadre du contournement ouest de Strasbourg, le gisement de Berstett Langenberg (site n° 5.6 du projet) a livré sur près de deux hectares plusieurs occupations successives du Néolithique récent à La Tène finale. L’occupation de l’âge du Bronze se caractérise par 43 structures se répartissant quasiment sur toute l’emprise, tandis que les 31 faits du plein Bronze moyen correspondent à une dizaine de fosses, des silos (sept) et des fonds de silos probables (quatre), deux possibles bâtiments excavés, trois fentes et cinq chablis. Aucun plan de bâtiment n’a été repéré, mais des espaces vides entourés de fosses ou silos suggèrent l’emplacement de bâtiments, tout comme les restes de torchis (architecture de terre et de bois). La quantité importante de vestiges céramiques mise au jour (160 récipients), tout comme plusieurs datations radiocarbones ont permis de mieux caractériser la typochronologie des ensembles pour le Bronze D et la transition Bronze C-D. Certains fonds de silos ont livré des vases vraisemblablement déposés entiers. Une série d’analyses biogéochimiques sur les parois internes d’une dizaine de vases ont permis d’identifier des graisses animales, tout comme des restes d’huile végétale (Brassicacées) ou de résine (Pinacée) pour des usages divers. Au-delà de la quantité importante de mobilier céramique exhumée, qui en fait un site de référence pour la fin du Bronze moyen, les autres types de mobiliers exhumés (lithique, faune) permettent de mieux caractériser ce type de site d’habitat encore peu connu dans l’est de la France.

  • Biphenyl Au(III) Complexes with Phosphine Ancillary Ligands: Synthesis, Optical Properties, and Electroluminescence in Light-Emitting Electrochemical Cells

    Jeannine Yang, Valerio Giuso, Min-Chih Hou, Edwyn Remadna, Jérémy Forté, Hai-Ching Su, Christophe Gourlaouen, Matteo Mauro, Benoît Bertrand
    Inorganic Chemistry, 2023, 62 (12), pp.4903-4921. ⟨10.1021/acs.inorgchem.2c04293⟩ | Publiée le 10 mars 2023
    Article dans une revue

    A series of ten cationic complexes of the general formula [(C^C)Au(P^P)]X, where C^C = 4,4′-di-tert-butyl-1,1′-biphenyl, P^P is a diphosphine ligand, and X is a noncoordinating counteranion, have been synthesized and fully characterized by means of chemical and X-ray structural methods. All the complexes display a remarkable switch-on of the emission properties when going from a fluid solution to a solid state. In the latter, long-lived emission with lifetime τ = 1.8–83.0 μs and maximum in the green-yellow region is achieved with moderate to high photoluminescence quantum yield (PLQY). This emission is ascribed to an excited state with a mainly triplet ligand-centered (3LC) nature. This effect strongly indicates that rigidification of the environment helps to suppress nonradiative decay, which is mainly attributed to the large molecular distortion in the excited state, as supported by density functional theory (DFT) and time-dependent DFT (TD-DFT) computation. In addition, quenching intermolecular interactions of the emitter are avoided thanks to the steric hindrance of the substituents. Emissive properties are therefore restored efficiently. The influence of both diphosphine and anion has been investigated and rationalized as well. Using two complexes as examples and owing to their enhanced optical properties in the solid state, the first proof-of-concept of the use of gold(III) complexes as electroactive materials for the fabrication of light-emitting electrochemical cell (LEC) devices is herein demonstrated. The LECs achieve peak external quantum efficiency, current efficiency, and power efficiency up to ca. 1%, 2.6 cd A–1, and 1.1 lm W–1 for complex 1PF6 and 0.9%, 2.5 cd A–1, and 0.7 lm W–1 for complex 3, showing the potential use of these novel emitters as electroactive compounds in LEC devices.

  • Influence of the Crystallinity of Silver Nanoparticles on Their Magnetic Properties

    Long Lin, Xiaogang Peng, Emilie Voirin, Bertrand Donnio, Mircea Rastei, Bertrand Vileno, Jean‐louis Gallani
    Helvetica Chimica Acta, 2023, 106 (3), ⟨10.1002/hlca.202200165⟩ | Publiée le 1 mars 2023
    Article dans une revue

    The magnetic properties of noble‐metal nanoparticles are a puzzling phenomenon, tentatively often explained as a size effect or a ligand effect. Many experimental studies performed to date have attempted to vary these readily available parameters without reaching a definitive conclusion. In an attempt at better understanding the role of core crystallinity on these magnetic properties, we have compared the behavior of silver nanoparticles, which were either single‐crystalline or multi‐twinned, of almost identical sizes and with the same ligand coating. Our results indicate that single‐crystalline nanoparticles tend to behave as classical paramagnetic materials, whereas multi‐twinned ones exhibit a combination of para‐ and ferro‐magnetic behaviors. Our hypothesis is that lattice defects within the core bear magnetic moments which couple through conduction electrons, with dipolar interactions also playing a local and macroscopic role.

  • Illumination of a progressive allosteric mechanism mediating the glycine receptor activation

    Sophie Shi, Solène N Lefebvre, Laurie Peverini, Adrien Cerdan, Paula Milán Rodríguez, Marc Gielen, Jean-Pierre Changeux, Marco Cecchini, Pierre-Jean Corringer
    Nature Communications, 2023, 14 (1), pp.795. ⟨10.1038/s41467-023-36471-7⟩ | Publiée le 13 février 2023
    Article dans une revue

    Pentameric ligand-gated ion channel mediate signal transduction at chemical synapses by transiting between resting and open states upon neurotransmitter binding. Here, we investigate the gating mechanism of the glycine receptor fluorescently labeled at the extracellulartransmembrane interface by voltage-clamp fluorimetry (VCF). Fluorescence reports a glycineelicited conformational change that precedes pore opening. Low concentrations of glycine, partial agonists or specific mixtures of glycine and strychnine trigger the full fluorescence signal while weakly activating the channel. Molecular dynamic simulations of a partial agonist boundclosed Cryo-EM structure show a highly dynamic nature: a marked structural flexibility at both the extracellular-transmembrane interface and the orthosteric site, generating docking properties that recapitulate VCF data. This work thus illuminates a progressive propagating transition towards channel opening, displaying structural plasticity with novel implications concerning the mechanism of action of allosteric effectors.

  • Photophysical characterization of a bisacridinium-diphenylporphyrin conjugate

    Federica Ruani, Amy Edo-Osagie, Henri-Pierre Jacquot de Rouville, Valérie Heitz, Barbara Ventura, Nicola Armaroli
    Journal of Porphyrins and Phthalocyanines, 2023, 27 (1-4), pp.569 - 575. ⟨10.1142/S1088424623500396⟩ | Publiée le 28 janvier 2023
    Article dans une revue

    A molecular conjugate made of a free-base diphenyl porphyrin chromophore (DPP) translinked to two N-acridinium units has been synthesized and photophysically characterized in acetonitrile. Interestingly, the emission of both fluorophores is quenched in the array at room temperature. Steadystate and time-resolved optical analysis proved that an ultrafast electron transfer from the porphyrin to the acridinium units occurs upon excitation of either the porphyrin or the acridinium moiety. On the other hand, at low temperature (77 K) the emission of the porphyrin is completely recovered, thanks to the inhibition of the electron transfer, and a photoinduced energy transfer from the acridinium to the porphyrin component is observed.

  • Sulfurized diterpenoids in amber as diagenetic indicators of sulfate-reducing processes in past depositional environments

    Lauriane Lenen, Alice Fradet, Philippe Schaeffer, Bernard Gomez, Pierre Adam
    Organic & Biomolecular Chemistry, 2023, 21 (4), pp.768-774. ⟨10.1039/d2ob02017c⟩ | Publiée le 25 janvier 2023
    Article dans une revue

    Two novel compounds isolated from an amber sample from the Santonian of Piolenc (Vaucluse, SE France) were identified using nuclear magnetic resonance and high-resolution mass spectrometry as sulfurized analogues of diterpenic acids from the isopimaric series originating from ancient conifers possibly related to the Cupressaceae family. These two compounds are members of a diterpenoid series corresponding to early diagenetic transformation products of resin diterpenoids. They were likely formed once plant resin comes into contact with reduced sulfur species originating from bacterial sulfate reduction occurring in anaerobic settings such as mangroves or marshes. They represent the first evidence of sulfurization processes affecting plant resin prior to diagenetic transformation into amber. Given their mode of formation, these compounds may be used as indicators of sulfate-reducing processes in past depositional environments.

  • Mechanisms of Radical Formation on Chemically Modified Graphene Oxide under Near Infrared Irradiation

    Lucas Jacquemin, Zheng Mei Song, Nolwenn Le Breton, Yuta Nishina, Sylvie Choua, Giacomo Reina, Alberto Bianco
    Small, 2023, ⟨10.1002/smll.202207229⟩ | Publiée le 20 janvier 2023
    Article dans une revue

    In this work, the mechanisms of radical generation on different functionalized graphene oxide (GO) conjugates under near-infrared (NIR) light irradiation are investigated. The GO conjugates are designed to understand how chemical functionalization can influence the generation of radicals. Both pristine and functionalized GO are irradiated by a NIR laser, and the production of different reactive oxygen species (ROS) is investigated using fluorimetry and electron paramagnetic resonance to describe the type of radicals present on the surface of GO. The mechanism of ROS formation involves a charge transfer from the material to the oxygen present in the media, via the production of superoxide and singlet oxygen. Cytotoxicity and effects of ROS generation are then evaluated using breast cancer cells, evidencing a concentration dependent cell death associated to the heat and ROS. The study provides new hints to understand the photogeneration of radicals on the surface of GO upon near infrared irradiation, as well as, to assess the impact on these radicals in the context of a combined drug delivery system and phototherapeutic approach. These discoveries open the way for a better control of phototherapy-based treatments employing graphene-based materials.

  • Crystal Engineering, Electron Conduction, Molecular Recognition and Reactivity by Chalcogen Bonds in Tetracyanoquinodimethanes Fused with [1,2,5]Chalcogenadiazoles

    Takuya Shimajiri, Henri-Pierre Jacquot de Rouville, Valérie Heitz, Tomoyuki Akutagawa, Takanori Fukushima, Yusuke Ishigaki, Takanori Suzuki
    SYNLETT, 2023, 34 (17), pp.1978-1990. ⟨10.1055/a-2072-2951⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Studies on a series of tetracyanoquinodimethanes (TCNQs) fused with [1,2,5]chalcogenadiazole rings reveals that chalcogen bonds (ChBs), through E•••N≡C (E = S or Se) contacts, are a decisive factor in determining their crystal structures, with the formation of one- or two-dimensional networks in a lateral direction. For anion-radical salts generated by one-electron reduction, electron conduction occurs in the direction of the network due to intermolecular electronic interactions involving ChBs. Based on the reliable synthon E•••N≡C for crystal engineering, molecular recognition occurs so that solid-state molecular complexes are selectively formed with certain donors, such as xylenes, among their isomers by charge-transfer-type clathrate formation. The inclusion cavity of the clathrate might provide a reaction environment for photoinduced electron transfer in the solid state. The accommodation of multiple conformers of overcrowded ethylene exhibiting thermo/mechanochromism is another example of a novel function that can be realized by ChBs through E•••N≡C contacts. Therefore, these chalcogenadiazolo-TCNQs endowed with the ability to form ChBs are promising materials for the development of novel solid-state functions.

  • School of cheminformatics in Latin America

    Karla Gonzalez-Ponce, Carolina Horta Andrade, Fiona Hunter, Johannes Kirchmair, Karina Martinez-Mayorga, José L Medina-Franco, Matthias Rarey, Alexander Tropsha, Alexandre Varnek, Barbara Zdrazil
    Journal of Cheminformatics, 2023, 15 (1), pp.82. ⟨10.1186/s13321-023-00758-0⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    We report the major highlights of the School of Cheminformatics in Latin America, Mexico City, November 24-25, 2022. Six lectures, one workshop, and one roundtable with four editors were presented during an online public event with speakers from academia, big pharma, and public research institutions. One thousand one hundred eighty-one students and academics from seventy-nine countries registered for the meeting. As part of the meeting, advances in enumeration and visualization of chemical space, applications in natural product-based drug discovery, drug discovery for neglected diseases, toxicity prediction, and general guidelines for data analysis were discussed. Experts from ChEMBL presented a workshop on how to use the resources of this major compounds database used in cheminformatics. The school also included a round table with editors of cheminformatics journals. The full program of the meeting and the recordings of the sessions are publicly available at https:// www. youtu be. com/@ Schoo lChem InfLA/ featu red.

  • Derivatization of the Peptidic Xxx-Zzz-His Motif toward a Ligand with Attomolar Cu II Affinity under Maintaining High Selectivity and Fast Redox Silencing

    Katharina Zimmeter, Bertrand Vileno, Carlos Platas-Iglesias, Bharath Vinjamuri, Angélique Sour, Peter Faller
    Inorganic Chemistry, 2023, 62 (24), pp.9429-9439. ⟨10.1021/acs.inorgchem.3c00480⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Cu chelation in biological systems is of interest as a tool to study the metabolism of this essential metal or for applications in the case of diseases with a systemic or local Cu overload, such as Wilson’s or Alzheimer’s disease. The choice of the chelating agent must meet several criteria. Among others, affinities and kinetics of metal binding and related metal selectivity are important parameters of the chelators to consider. Here, we report on the synthesis and characterization of Cu-binding properties of two ligands, L1 and L2, derivatives of the well-known peptidic CuII-binding motif Xxx-Zzz-His (also called ATCUN), where CuII is bound to the N-terminal amine, two amidates, and the imidazole. In either L, the N-terminal amine was replaced with a pyridine, and for L2, one amide was replaced with an amine compared to Xxx-Zzz-His. In particular, L2 showed several interesting features, including a CuII-binding affinity with a log KDapp = −16.0 similar to that of EDTA and stronger than all reported ATCUN peptides. L2 showed high selectivity for CuII over ZnII and other essential metal ions, even under the challenging conditions of the presence of human serum albumin. Further, L2 showed fast and efficient CuII redox silencing qualities and CuII-L2 was stable in the presence of mM GSH concentrations. Benefitting the fact that L2 can be easily elongated on its peptide part by standard SPPS to add other functions, L2 has attractive properties as a CuII chelator for application in biological systems.

  • A cytosolic bifunctional geranyl/farnesyl diphosphate synthase provides MVA-derived GPP for geraniol biosynthesis in rose flowers

    Corentin Conart, Dikki Pedenla Bomzan, Xing-Qi Huang, Jean-Etienne Bassard, Saretta N. Paramita, Denis Saint-Marcoux, Aurélie Rius-Bony, Gal Hivert, Anthony Anchisi, Hubert Schaller, Latifa Hamama, Jean-Louis Magnard, Agata Lipko, Ewa Swiezewska, Patrick Jame, Geneviève Riveill, Laurence Hibrand-Saint Oyant, Michel Rohmer, Efraim Lewinsohn, Natalia Dudareva, Sylvie Baudino, Jean-Claude Caissard, Benoit Boachon
    Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (19), pp.e2221440120. ⟨10.1073/pnas.2221440120⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Geraniol derived from essential oils of various plant species is widely used in the cosmetic and perfume industries. It is also an essential trait of the pleasant smell of rose flowers. In contrast to other monoterpenes which are produced in plastids via the methyl erythritol phosphate pathway, geraniol biosynthesis in roses relies on cytosolic NUDX1 hydrolase which dephosphorylates geranyl diphosphate (GPP). However, the metabolic origin of cytosolic GPP remains unknown. By feeding Rosa chinensis “Old Blush” flowers with pathway-specific precursors and inhibitors, combined with metabolic profiling and functional characterization of enzymes in vitro and in planta, we show that geraniol is synthesized through the cytosolic mevalonate (MVA) pathway by a bifunctional geranyl/farnesyl diphosphate synthase, RcG/FPPS1, producing both GPP and farnesyl diphosphate (FPP). The downregulation and overexpression of RcG/FPPS1 in rose petals affected not only geraniol and germacrene D emissions but also dihydro-β-ionol, the latter due to metabolic cross talk of RcG/FPPS1-dependent isoprenoid intermediates trafficking from the cytosol to plastids. Phylogenetic analysis together with functional characterization of G/FPPS orthologs revealed that the G/FPPS activity is conserved among Rosaceae species. Site-directed mutagenesis and molecular dynamic simulations enabled to identify two conserved amino acids that evolved from ancestral FPPSs and contribute to GPP/FPP product specificity. Overall, this study elucidates the origin of the cytosolic GPP for NUDX1-dependent geraniol production, provides insights into the emergence of the RcG/FPPS1 GPPS activity from the ancestral FPPSs, and shows that RcG/FPPS1 plays a key role in the biosynthesis of volatile terpenoid compounds in rose flowers.

  • Binuclear Biphenyl Organogold(III) Complexes: Synthesis, Photophysical and Theoretical Investigation, and Anticancer Activity

    Valerio Giuso, Jeannine Yang, Jérémy Forté, Héloïse Dossmann, Chantal Daniel, Christophe Gourlaouen, Matteo Mauro, Benoît Bertrand
    ChemPlusChem, 2023, 88 (11), pp.e202300303. ⟨10.1002/cplu.202300303⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    A series of four binuclear complexes of general formula [(C^C)Au(Cl)(L^L)(Cl)Au(C^C)], where C^C is 4,4'-diterbutylbiphenyl and L^L is either a bridging diphosphine or 4,4'bipyridine, are synthetized with 52 to 72 % yield and structurally characterized by X-ray diffraction. The use of the chelating 1,2diphenylphosphinoethane ligand in a 1 : 2 (P^P):Au stoichiometry leads to the near quantitative formation of a gold doublecomplex salt of general formula [(C^C)Au(P^P)][(C^C^)AuCl 2 ]. The compounds display long-lived yellow-green phosphorescence with λ em in the range of 525 to 585 nm in the solid state with photoluminescence quantum yields (PLQY) up to 10 %. These Au III complexes are tested for their antiproliferative activity against lung adenocarcinoma cells A549 and results show that compounds 2 and 5 are the most promising candidates. The digold salt 5 shows anticancer activity between 66 and 200 nM on the tested cancer cell lines, whereas derivative 2 displays concentration values required to reduce by 50 % the cell viability (IC 50) between 7 and 11 μM. Reactivity studies of compound 5 reveal that the [(C^C)Au(P^P)] + cation is stable in the presence of relevant biomolecules including glutathione suggesting a structural mechanism of action.

  • Sensitization properties of acetophenone azine, a new skin sensitizer identified in textile

    Isabelle Manière, Alizée Aubert, Céline Dubois, Cécilia Solal, Jean-Pierre Lepoittevin, Christophe Rousselle
    Contact Dermatitis, 2023, 88 (1), pp.35-42. ⟨10.1111/cod.14216⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Background: Acetophenone azine (CAS no. 729-43-1) present in sport equipment (shoes, socks and shin pads) has been suspected to induce skin allergies. Twelve case reports of allergy in children and adults from Europe and North America were published between 2016 and 2021.Objectives: The objective of this study was to confirm that acetophenone azine is indeed a skin sensitizer based on in vitro/ in vivo testings derived from the Adverse Outcome Pathway (AOP) built for skin sensitization by OECD in 2012.Methods: acetophenone azine was tested in vitro according to the human Cell Line Activation Test (h-CLAT) and the ARE-Nrf2 Luciferase Test (Keratinosens®) and in vivo using the Local Lymph Nodes Assay (LLNA).Results: Both the h-CLAT and the Keratinosens® were positive whereas the LLNA performed at 5, 2.5 and 1% (w/v) of acetophenone azine, was negative.Conclusion: Based on these results, acetophenone azine was considered as a skin sensitizer. This was recently confirmed by its classification under the CLP regulation.

  • Dual Role of Glutathione as a Reducing Agent and Cu-Ligand Governs the ROS Production by Anticancer Cu-Thiosemicarbazone Complexes

    Alessandra G. Ritacca, Enrico Falcone, Iman Doumi, Bertrand Vileno, Peter Faller, Emilia Sicilia
    Inorganic Chemistry, 2023, 62 (9), pp.3957-3964. ⟨10.1021/acs.inorgchem.2c04392⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    α-Pyridyl thiosemicarbazones (TSC) such as Triapine (3AP) and Dp44mT are a promising class of anticancer agents. Contrary to Triapine, Dp44mT showed a pronounced synergism with CuII, which may be due to the generation of reactive oxygen species (ROS) by Dp44mT-bound CuII ions. However, in the intracellular environment, CuII complexes have to cope with glutathione (GSH), a relevant CuII reductant and CuI-chelator. Here, aiming at rationalizing the different biological activity of Triapine and Dp44mT, we first evaluated the ROS production by their CuII-complexes in the presence of GSH, showing that CuII-Dp44mT is a better catalyst than CuII-3AP. Furthermore, we performed density functional theory (DFT) calculations, which suggest that a different hard/soft character of the complexes could account for their different reactivity with GSH.

  • Remote template effect in the synthesis of bipyridine-strapped porphyrins

    Mathilde Berthe, Yoshiyuki Kagawa, Axel Riquet, Takashi Hayashi, Jean Weiss, Jennifer A. Wytko
    Chemical Communications, 2023, 59 (44), pp.6718-6721. ⟨10.1039/D3CC01697H⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    A bipyridine-strapped porphyrin was prepared using a remote template effect of alkali or transition metal cations in the bipyridine subunit to enhance the yield 10-fold. The flexibility of the bipyridine-strap also allowed the synthesis of a doubly strapped porphyrin.

  • Enantioseparation of new axially chiral carboxylic acids on polysaccharide-based chiral stationary phases under normal phase elution conditions

    Barbara Sechi, Victor Mamane, Roberto Dallocchio, Alessandro Dessì, Sergio Cossu, Giorgi Jibuti, Paola Peluso
    Journal of Pharmaceutical and Biomedical Analysis Open, 2023, 1, pp.100011. ⟨10.1016/j.jpbao.2023.100011⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    In the last decade, the availability of new and versatile synthetic strategies for the preparation of substituted 4,4'bipyridyl derivatives based on chemo-and regioselective functionalization of the 4,4'-bipyridine core has encouraged studies for exploring the bioactivity of these compounds in the fields of drug discovery and medicinal chemistry. In substituted 4,4'-bipyridines, chirality may emerge from restricted rotation induced by sterically hindered atoms or functional groups located around the 4,4'-biaryl bond (chiral axis). The first atropisomeric substituted 4,4'-bipyridine was prepared in 2008, and no asymmetric synthesis to produce pure atropisomers of chiral 4,4'-bipyridine derivatives has been available so far. Thus, in the last few years, our groups developed methods to separate atropisomers of a wide series of 4,4'-derivatives by high-performance liquid chromatography (HPLC) using polysaccharide-based chiral stationary phases (CSPs). In the frame of our interest in this field, we reported herein the synthesis of two new chiral carboxylic acids containing an axially chiral 4,4'bipyridyl unit as source of chirality, and their HPLC enantioseparation on polysaccharide-based CSPs. In particular, the impact of analyte and CSP structures on the enantioseparation outcomes as well as mechanisms and noncovalent interactions underlying the enantioseparation were explored by using electrostatic potential analysis and molecular dynamics (MD) simulations.

  • Structural and conformational analysis of a biaryl phosphine integrating a calix[4]arene cavity. Can the phosphorus atom behave as an introverted donor?

    Christophe Gourlaouen, Fethi Elaieb, Eric Brenner, Dominique Matt, Jack Harrowfield, Louis Ricard
    Dalton Transactions, 2023, 52 (27), pp.9202 - 9207. ⟨10.1039/d3dt00612c⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    The conformational preference of a cavity-based biaryl phosphine, namely 5-(2-diphenylphosphinyl-phenyl)-25,26,27,28-tetrapropyloxycalix[4]arene (L) has been investigated by density functional theory calculations. The analysis showed that the barrier to rotation about the C–C axle of the biaryl unit is only 10.7 kcal mol−1, this rendering possible access to conformers of two types, those in which the P lone pair sits at the cavity entrance and points to the calixarene interior, others with a more open structure where the P atom is located outside the cavity. As revealed by a single crystal X-ray diffraction study, the biaryl phosphine appears virtually as an atropisomer in the solid state in which the phosphorus atom lies totally out of the cavity defined by the four phenoxy rings.

  • Chalcogen Bonding Catalysis: Tellurium, the Last Frontier?

    Patrick Pale, Victor Mamane
    Chemistry - A European Journal, In press, ⟨10.1002/chem.202302755⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    : Chalcogen bonding (ChB) is the non‐covalent interaction occurring between chalcogen atoms as Lewis acid sites and atoms or groups of atoms able to behave as Lewis bases through their lone pair or p electrons. Analogously to its sister halogen bonding, the high directionality of this interaction was implemented for the precise structural organization in the solid state and in solution. Regarding catalysis, ChB is now accepted as a new mode of activation as demonstrated by the increased number of examples in the last five years. In the family of ChB catalysts, those based on tellurium rapidly appeared to overcome their lighter sulfur and selenium counterparts. In this review, we highlight the Lewis acid properties of tellurium‐based derivatives in solution and summarize the start‐of‐the‐art of their applications in catalysis.

  • Complexes of Fe(III) and Ga(III) Derived from the Cyclic 6‐ and 7‐Membered Hydroxamic Acids Found in Mixed Siderophores

    Pawel Jewula, Mickaël Grandmougin, Mélanie Choppin, Anna Maria Chiara Tivelli, Agnese Amati, Yoann Rousselin, Lydia Karmazin, Jean‐Claude Chambron, Michel Meyer
    European Journal of Inorganic Chemistry, 2023, 26 (13), pp.e202300038. ⟨10.1002/ejic.202300038⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Six- and seven-membered cyclic hydroxamic acids are found as terminal binding units in different families of siderophores, including exochelins and mycobactins. The simplest models of these preorganized chelating ligands were known, but their coordination chemistry with Fe3+, the target metal ion of siderophores, had never been reported. Four complexes were synthesized and studied: two Fe3+ complexes, one with the six-membered ring hydroxamate PIPO− and one with the seven-membered ring hydroxamate AZEPO−, and the two corresponding Ga3+ complexes. X-ray diffraction studies showed that the interligand repulsion energies were better minimized in the case of the AZEPO− complexes whatever the metal cation considered, and that the Fe−O bond distances were shorter in [Fe(AZEPO)3] by comparison with [Fe(PIPO)3].

  • Porphyrin- and Bodipy-helicene conjugates: syntheses, separation of enantiomers and chiroptical properties

    Vincent Silber, Marion Jean, Nicolas Vanthuyne, Natalia del Rio, Paola Matozzo, Jeanne Crassous, Romain Ruppert
    Organic & Biomolecular Chemistry, 2023, Organic and Biomolecular Chemistry, 21 (44), pp.8924-8935. ⟨10.1039/d3ob01459b⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    The synthesis of several new compounds containing a chromophore and a helicenic moiety is reported. The preparation, characterisation and some physico-chemical studies are detailed. In particular, the two enantiomers of several chiral molecules of this type were separated by chiral HPLC (both analytically and in a preparative way) and their racemisation rates were determined for short-lived species. Electronic circular dichroism (ECD) and circular polarised luminescence (CPL) measurements were performed for the compounds with a very long racemisation half-life. Chiral porphyrins and Bodipys both gave ECD and CPL responses over a large area of the visible spectrum. The syntheses of several porphyrin and bodipy helicene conjugates are reported. Chiral HPLC separations of the enantiomers were performed and ECD and CPL spectra determined.

  • Tuning the electrical properties of graphene oxide through low-temperature thermal annealing

    Cataldo Valentini, Verónica Montes Garcia, Pietro Antonio Livio, Tomasz Chudziak, Jesus Raya, Artur Ciesielski, Paolo Samorì
    Nanoscale, 2023, 15 (12), pp.5743-5755. ⟨10.1039/D2NR06091D⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    During the last fifteen years, the reduction of electrically insulating graphene oxide (GO) through the elimination of oxygen containing functional groups and the restoration of sp2 conjugation yielding its conducting form, known as reduced graphene oxide (rGO), has been widely investigated as a scalable and low-cost method to produce materials featuring graphene-like characteristics. Among various protocols, thermal annealing represents an attractive green approach compatible with industrial processes. However, the high temperatures typically required to accomplish this process are energetically demanding and are incompatible with the use of plastic substrates often desired for flexible electronics applications. Here, we report a systematic study on the low-temperature annealing of GO by optimizing different annealing conditions, i.e., temperature, time, and reduction atmosphere. We show that the reduction is accompanied by structural changes of GO, which affect its electrochemical performance when used as an electrode material in supercapacitors. We demonstrate that thermally-reduced GO (TrGO) obtained under air or inert atmosphere at relatively low temperatures (<300 °C) exhibits low film resistivities (10−2–10−4 Ω m) combined with unaltered resistance after 2000 bending cycles when supported on plastic substrates. Moreover, it exhibits enhanced electrochemical characteristics with a specific capacitance of 208 F g−1 and a capacitance retention of >99% after 2000 cycles. The reported strategy is an important step forward toward the development of environmentally friendly TrGO for future electrical or electrochemical applications.

  • Human serum albumin as a copper source for anticancer thiosemicarbazones

    Martin Schaier, Enrico Falcone, Tomas Prstek, Bertrand Vileno, Sonja Hager, Bernhard K. Keppler, Petra Heffeter, Gunda Koellensperger, Peter Faller, Christian R. Kowol
    Metallomics, 2023, 15 (8), pp.mfad046. ⟨10.1093/mtomcs/mfad046⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Thiosemicarbazones (TSCs) are a class of biologically active compounds with promising anticancer activity. Their typical mechanism, especially of the clinically far developed representative Triapine, is chelation of iron (Fe), with the Fe-containing enzyme ribonucleotide reductase as primary intracellular target. However, for the subclass of terminally disubstituted, nanomolar-active derivatives like Dp44mT and Me2NNMe2, recent findings suggest that the chelation, stability, and reduction properties of the copper(II) (Cu) complexes are essential for their modes of action. Consequently, it is important to elucidate whether blood serum Cu(II) is a potential metal source for these TSCs. To gain more insights, the interaction of Triapine, Dp44mT or Me2NNMe2 with purified human serum albumin (HSA) as the main pool of labile Cu(II) was investigated by UV-vis and electron paramagnetic resonance measurements. Subsequently, a size-exclusion chromatography inductively coupled plasma mass spectrometry method for the differentiation of Cu species in serum was developed, especially separating the non-labile Cu enzyme ceruloplasmin from HSA. The results indicate that the TSCs specifically chelate copper from the N-terminal Cu-binding site of HSA. Furthermore, the Cu(II)-TSC complexes were shown to form ternary HSA conjugates, most likely via histidine. Noteworthy, Fe-chelation from transferrin was not overserved, even not for Triapine. In summary, the labile Cu pool of HSA is a potential source for Cu-TSC complex formation and, consequently, distinctly influences the anticancer activity and pharmacological behavior of TSCs.

  • Vanadyl(IV) porphyrin dimers with palladium(II) and platinum(II) linkages: syntheses, electronic properties and magnetic interactions between the two moieties

    Jordan L. Appleton, Nolwenn Le Breton, Mary-Ambre Carvalho, Jean Weiss, Athanassios K Boudalis, Christophe Gourlaouen, Sylvie Choua, Romain Ruppert
    Crystal Growth & Design, 2023, 23 (3), pp.1689-1696. ⟨10.1021/acs.cgd.2c01270⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    We report the synthesis of new vanadylporphyrins bearing peripheral coordination sites. By using palladium(II) or platinum(II) as connecting ions, porphyrin dimers were isolated and characterized by X-ray crystallography. These paramagnetic species were studied by electronic spectroscopy and Continuous Wave Electron Paramagnetic Resonance (CW EPR). Large bathochromic shifts were observed by comparing porphyrin monomers and dimers showing that electronic delocalization was present as demonstrated earlier for diamagnetic compounds. Despite the large distance (&gt; 14 Å) between the two vanadyl centers in these dimers, small dipolar interactions between the two paramagnetic ions could be determined.

  • Chalcogen‐Bond Catalysis: Telluronium‐Catalyzed [4+2]‐Cyclocondensation of (in situ Generated) Aryl Imines with Alkenes

    Loic Groslambert, Andres Padilla-Hernandez, Robin Weiss, Patrick Pale, Victor Mamane
    Chemistry - A European Journal, In press, ⟨10.1002/chem.202203372⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    In the chalcogen series, tellurium species exhibit the strongest chalcogen bonding (ChB) interaction with electron-rich atom. This property explains the renewed interested toward tellurium-based derivatives and their use in different applications, such as organocatalysis. In this context, the catalytic activity of telluronium salts in the Povarov reaction is presented herein. Different dienophiles, as well as imines of variable electronic nature, efficiently react in the presence of catalytic amount of either diarylmethyltelluronium or triaryltelluronium salts. Both catalysts could also readily perform the three-component Povarov reaction starting from aldehyde, aniline and dihydrofuran. The reactivity of telluroniums towards imines and aldehydes was confirmed in the solid state by the ability of Te atom to interact through ChB with the oxygen carbonyl of acetone, and in solution with significant shift variations of the imine proton and of the tellurium atom in 1 H and 125 Te NMR spectroscopy. For the most active telluronium catalysts bearing CF 3 groups, association constants (K) with N-phenyl phenylmethanimine in the range 22-38 M À 1 were measured in dichloromethane.

  • Assessing the Extent of Potential Inversion by Cyclic Voltammetry: Theory, Pitfalls, and Application to a Nickel Complex with Redox-Active Iminosemiquinone Ligands

    Cheriehan Hessin, Jules Schleinitz, Nolwenn Le Breton, Sylvie Choua, Laurence Grimaud, Vincent Fourmond, Marine Desage-El Murr, Christophe Léger
    Inorganic Chemistry, 2023, 62 (8), pp.3321-3332. ⟨10.1021/acs.inorgchem.2c04365⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Potential inversion refers to the situation where a protein cofactor or a synthetic molecule can be oxidized or reduced twice in a cooperative manner, that is the second electron transfer (ET) is easier than the first. This property is very important regarding the catalytic mechanism of enzymes that bifurcate electrons and the properties of bidirectional redox molecular catalysts that function in either direction of the reaction with no overpotential. Cyclic voltammetry is the most common technique for characterizing the thermodynamics and kinetics of ET to or from these molecules. However, a gap in the literature is the absence of analytical predictions to help interpret the values of the voltammetric peak potentials when potential inversion occurs ; the cyclic voltammograms are therefore often analyzed by simulating the data, with no discussion of the possibility of overfitting and often no estimation of the error on the determined parameters. Here we formulate the theory for the voltammetry of freely-diffusing or surface-confined two-electron redox species in the experimentally relevant irreversible limit where the peak separation depends on scan rate. We explain why the model is intrinsically underdetermined, and we illustrate this conclusion by the analysis of the voltammetry of a Ni complex with redox-active iminosemiquinone ligands. Being able to characterize the thermodynamics of two-electron transfer reactions will be crucial for designing more efficient catalysts.

  • Core–shell Fe3O4 @CoFe2O4 nanoparticles as high-performance anode catalysts for enhanced oxygen evolution reaction

    Lisa Royer, Iryna Makarchuk, Simon Hettler, Raul Arenal, Tristan Asset, Benjamin Rotonnelli, Antoine Bonnefont, Elena Savinova, Benoit Pichon
    Sustainable Energy & Fuels, 2023, 7 (14), pp.3239-3243. ⟨10.1039/d3se00130j⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Water electrolysis is a promising and environmentally friendly means for renewable energy storage. Recent progress in the development of anion exchange membranes (AEMs) has provided new perspectives for high-performance anode catalysts based on transition metal oxides (TMOs) for the sluggish anodic oxygen evolution reaction (OER). Here, we report on core–shell nanoparticles (Fe3O4@CoFe2O4) which allow combining an electrocatalytic shell (CoFe2O4) with a conductive core (Fe3O4). Such an original approach significantly minimizes critical Co content in the catalyst and avoids addition of unstable conductive carbon black. The core–shell nanoparticles outperform Co(1−x)Fe(2+x)O4 nanoparticles and show an exceptional OER activity per Co unit mass (2800 A gcobalt−1 at 1.65 V vs. RHE) suggesting synergistic interaction between the core and the shell. Along with the core–shell structure, the size of the Fe3O4 core is a critical parameter, with a large conductive Fe3O4 core being beneficial for OER enhancement

  • Polydopamine-Coated Polyurethane Foam as a Structured Support for the Development of an Easily Reusable Heterogeneous Photocatalyst Based on Eosin Y

    Han Peng, Thierry Romero, Philippe Bertani, Vincent Ritleng
    Catalysts, 2023, 13 (3), pp.589. ⟨10.3390/catal13030589⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    An easy-to-handle eosin Y-based heterogeneous photocatalyst was prepared by postfunctionalization of a polydopamine-coated open cell polyurethane foam (PDA@PUF) via the silanization of the adhesive layer with 3-(triethoxysilyl)propan-1-amine (APTES) and the subsequent EDC-mediated coupling of the resulting amino-functionalized foam with eosin Y. The obtained macroscopic material, EY-APTES@PDA@PUF, showed good efficiency and excellent reusability, in an easy-to-carry "dip-and-play" mode for at least six runs as photocatalyst for the aerobic oxidation of 2-methyl-5-nitroisoquinolin-2-ium iodide to the corresponding isoquinolone. Subsequent investigation of the catalytic efficiency of EY-APTES@PDA@PUF for the oxidation of sulfides to sulfoxides, however, evidenced non-negligible eosin Y leaching, leading to a progressive deactivation of the catalytic foam in this case. Two alternative synthetic protocols for the preparation of the macroscopic photocatalyst were next explored to avoid eosin Y leaching. In both cases however, cycling tests also highlighted a progressive deactivation of the catalytic foams in sulfide-to-sulfoxide oxidation reactions.

  • In situ observation of a stepwise [2 + 2] photocycloaddition process using fluorescence spectroscopy

    Meng-Fan Wang, Yun-Hu Deng, Yu-Xuan Hong, Jia-Hui Gu, Yong-Yong Cao, Qi Liu, Pierre Braunstein, Jian-Ping Lang
    Nature Communications, 2023, 14, pp.7766. ⟨10.1038/s41467-023-42604-9⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Using highly sensitive and selective in situ techniques to investigate the dynamics of intermediates formation is key to better understand reaction mechanisms. However, investigating the early stages of solid-state reactions/transformations is still challenging. Here we introduce in situ fluorescence spectroscopy to observe the evolution of intermediates during a two-step [2 + 2] photocycloaddition process in a coordination polymer platform. The structural changes and kinetics of each step under ultraviolet light irradiation versus time are accompanied by the gradual increase-decrease of intensity and blue-shift of the fluorescence spectra from the crystals. Monitoring the fluorescence behavior using a laser scanning confocal microscope can directly visualize the inhomogeneity of the photocycloaddition reaction in a single crystal. Theoretical calculations allow us to rationalize the fluorescence behavior of these compounds. We provide a convenient strategy for visualizing the solid-state photocycloaddition dynamics using fluorescence spectroscopy and open an avenue for kinetic studies of a variety of fast reactions.

  • Toward Density Functional Theory on Quantum Computers ?

    Bruno Senjean, Saad Yalouz, Matthieu Saubanère
    SciPost Physics, 2023, 14 (3), pp.055. ⟨10.21468/SciPostPhys.14.3.055⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Quantum Chemistry and Physics have been pinpointed as killer applications for quantum computers, and quantum algorithms have been designed to solve the Schrödinger equation with the wavefunction formalism. It is yet limited to small systems, as their size is limited by the number of qubits available. Computations on large systems rely mainly on meanfield-type approaches such as density functional theory, for which no quantum advantage has been envisioned so far. In this work, we question this a priori by proposing a counterintuitive mapping from the non-interacting to an auxiliary interacting Hamiltonian that may provide the desired advantage. Contents

  • Evolutionary metabolomics of specialized metabolism diversification in the genus Nicotiana highlights N- acylnornicotine innovations

    David Elser, David Pflieger, Claire Villette, Baptiste Moegle, Laurence Miesch, Emmanuel Gaquerel
    Science Advances , 2023, 9 (34), pp.eade8984. ⟨10.1126/sciadv.ade8984⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Specialized metabolite (SM) diversification is a core process to plants’ adaptation to diverse ecological niches. Here, we implemented a computational mass spectrometry–based metabolomics approach to exploring SM diversification in tissues of 20 species covering Nicotiana phylogenetics sections. To markedly increase metabolite annotation, we created a large in silico fragmentation database, comprising >1 million structures, and scripts for connecting class prediction to consensus substructures. Together, the approach provides an unprecedented cartography of SM diversity and section-specific innovations in this genus. As a case study and in combination with nuclear magnetic resonance and mass spectrometry imaging, we explored the distribution of N-acylnornicotines, alkaloids predicted to be specific to Repandae allopolyploids, and revealed their prevalence in the genus, albeit at much lower magnitude, as well as a greater structural diversity than previously thought. Together, the data integration approaches provided here should act as a resource for future research in plant SM evolution.

  • Modified Co/TiO2 catalysts for CO2 hydrogenation to fuels

    Canio Scarfiello, Katerina Soulantica, Simon Cayez, Aurélien Durupt, Guillaume Viau, Nolwenn Le Breton, Athanassios Boudalis, F.C. Meunier, Guillaume Clet, Mathias Barreau, Davide Salusso, Spiros Zafeiratos, Doan Pham Minh, Philippe Serp
    Journal of Catalysis, 2023, 428, pp.115202. ⟨10.1016/j.jcat.2023.115202⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    The direct CO2 conversion to liquid fuels by catalytic hydrogenation (CO2-based Fischer-Tropsch synthesis, FTS), is a sustainable approach to reduce CO2 emissions. This challenging reaction proceeds through tandem catalysis involving reverse water gas shift reaction to produce CO and subsequent traditional CO-FTS. Unmodified Co-based catalysts allow performing the reaction at low temperatures (&lt; 250 °C), albeit producing mainly methane. In this study, we modified a commercial TiO2-P25 support by NaBH4 reduction so as to introduce controlled amounts of promoters and oxygen vacancies (Ov). The modified and unmodified supports were used to prepare Co-based catalysts, which were evaluated for CO2-based FTS at 220-250 °C and 20 bar. The promoted catalysts outperform the one prepared on commercial TiO2 in terms of activity and selectivity towards C5+. Detailed characterizations of the catalysts were performed to decipher the role of promoters. We show that, besides improving CO2 activation and limiting H2 activation, the presence of alkali on the support allows a modulation of hydrogen spillover in the system. The best catalyst in terms of activity and selectivity is the one for which sodium is deposited in sufficient amount to modulate the hydrogen spillover, which allows an optimal surface C/H ratio on cobalt.

  • The Mechanism of Action of SAAP-148 Antimicrobial Peptide as Studied with NMR and Molecular Dynamics Simulations

    Morgane Adélaïde, Evgeniy Salnikov, Francisco Ramos-Martín, Christopher Aisenbrey, Catherine Sarazin, Burkhard Bechinger, Nicola D’amelio
    Pharmaceutics, 2023, 15 (3), pp.761. ⟨10.3390/pharmaceutics15030761⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Background: SAAP-148 is an antimicrobial peptide derived from LL-37. It exhibits excellent activity against drug-resistant bacteria and biofilms while resisting degradation in physiological conditions. Despite its optimal pharmacological properties, its mechanism of action at the molecular level has not been explored. Methods: The structural properties of SAAP-148 and its interaction with phospholipid membranes mimicking mammalian and bacterial cells were studied using liquid and solid-state NMR spectroscopy as well as molecular dynamics simulations. Results: SAAP-148 is partially structured in solution and stabilizes its helical conformation when interacting with DPC micelles. The orientation of the helix within the micelles was defined by paramagnetic relaxation enhancements and found similar to that obtained using solid-state NMR, where the tilt and pitch angles were determined based on 15N chemical shift in oriented models of bacterial membranes (POPE/POPG). Molecular dynamic simulations revealed that SAAP-148 approaches the bacterial membrane by forming salt bridges between lysine and arginine residues and lipid phosphate groups while interacting minimally with mammalian models containing POPC and cholesterol. Conclusions: SAAP-148 stabilizes its helical fold onto bacterial-like membranes, placing its helix axis almost perpendicular to the surface normal, thus probably acting by a carpet-like mechanism on the bacterial membrane rather than forming well-defined pores.

  • Carbonylmetallates as versatile 2-, 4- or 6-Electron Donor Metalloligands in Transition-Metal Complexes and Clusters: A Global Approach

    Noura Naili, Samia Kahlal, Bachir Zouchoune, Jean-Yves Saillard, Pierre Braunstein
    Chemistry - A European Journal, 2023, ⟨10.1002/chem.202203557⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Carbonylmetallates [m]-, such as [MoCp(CO)3]-, [Mn(CO)5]-, [Co(CO)4]-, have long been successfully used in the preparation of hundreds of metal carbonyl complexes and clusters, in particular of the heterometallic type. We focus here on situations where [m]- can be viewed as a terminal, doubly- or even triply-bridging metalloligand, developing metal-metal interactions with one, two or three metal centres M, respectively. With metals M from the groups 10-12, is not straightforward or even impossible to rationalize the structure of the resulting clusters by applying the well-known Wade-Mingos rules. A very simple but global approach is presented to rationalize structures not obeying usual electron-counting rules by considering the anionic building blocks [m]- as metalloligands behaving formally as potential 2, 4 or 6 electron donors, similarly to what is typically encountered with e.g. halido ligands. Qualitative and theoretical arguments using DFT calculations highlight similarities between seemingly unrelated metal complexes and clusters and also entails a predicting power with high synthetic potential.

  • Multi-Responsive Eight-State Bis(acridinium-Zn(II) porphyrin) Receptor

    Amy Edo-Osagie, Dylan Serillon, Federica Ruani, Xavier Barril, Christophe Gourlaouen, Nicola Armaroli, Barbara Ventura, Henri-Pierre Jacquot de Rouville, Valérie Heitz
    Journal of the American Chemical Society, 2023, 145 (19), pp.10691-10699. ⟨10.1021/jacs.3c01089⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    A multi-responsive receptor consisting of two (acridinium-Zn(II) porphyrin) conjugates has been designed. The binding constant between this receptor and a ditopic guest has been modulated (i) upon addition of nucleophiles converting acridinium moieties into the non-aromatic acridane derivatives and (ii) upon oxidation of the porphyrin units. A total of eight states has been probed for this receptor resulting from the cascade of the recognition and responsive events. Moreover, the acridinium/ acridane conversion leads to a significant change of the photophysical properties, switching from electron to energy transfer processes. Interestingly, for the bis(acridinium-Zn(II) porphyrin) receptor, charge-transfer luminescence in the nearinfrared has been observed.

  • Model reactions for the evaluation of poly- and multifunctional molecules as potential interfacial agents for the compatibilization of polyethylene/poly(ethylene-co-vinyl alcohol) blends†

    Elisa Gitzhofer, Bertrand Vileno, Michel Bouquey, Delphine Chan-Seng
    Polymer Chemistry, 2023, 14, pp.934-942. ⟨10.1039/d2py01495e⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    In aiming to identify an interfacial agent for polyethylene (PE)/poly(ethylene-co-vinyl alcohol) (EVOH) blends, which are the main components found in flexible food packaging, triallyl isocyanurate and a molecule bearing two (2,2,6,6-tetramethylpiperidin-1-yl)oxyl (TEMPO) groups were initially investigated with model molecules of targeted polymers, but the results were only moderate. The design of a suitable interfacial agent led to 4-glycidyl-2,2,6,6-tetramethylpiperidin-1-oxyl, which demonstrated covalent coupling of the TEMPO group with the model molecule of PE and the glycidyl group with the hydroxyl group of the model molecule of EVOH. This approach with model molecules could be a way to screen molecules that could have potential as interfacial agents to compatibilize polymers from materials that need to be upcycled.

  • Design, synthesis, antimicrobial activity and molecular docking study of cationic bis‐benzimidazole‐silver(I) complexes

    Elvan Üstün, Neslihan Şahin, İlknur Özdemir, Selami Günal, Nevin Gürbüz, İsmail Özdemir, David Sémeril
    Archiv der Pharmazie / Chemistry in Life Sciences, 2023, 356 (10), pp.2300302. ⟨10.1002/ardp.202300302⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Two series of bis(1-alkylbenzimidazole)silver(I) nitrate and bis(1-alkyl-5,6-dimethylbenzimidazole)silver(I) nitrate complexes, in which the alkyl substituent is either an allyl, a 2-methylallyl, an isopropyl or a 3-methyloxetan-3-yl-methyl chain, were synthesized and fully characterized. The eight N-coordinated silver(I) complexes were screened for both antimicrobial activities against Gram-negative (Escherichia coli, Pseudomonas aeruginosa, Klebsiella pneumoniae, and Acinetobacter baumannii) and Gram-positive (Staphylococcus aureus, Staphylococcus aureus MRSA, and Enterococcus faecalis) bacteria and antifungal activities against Candida albicans and Candida glabrata strains. Moderate minimal inhibitory concentrations (MIC) of 0.087 μmol/mL were found when the Gram-negative and Gram-positive bacteria were treated with the silver complexes. Nevertheless, MIC values of 0.011 μmol/mL, twice lower than for the well-known fluconazole, against the two fungi were measured. In addition, molecular docking was carried out with the structure of Escherichia coli DNA gyrase and CYP51 from the pathogen Candida glabrata with the eight organometallic complexes, and molecular reactivity descriptors were calculated with the density functional theory-based calculation methods.

  • Antioxidant Activity and Skin Sensitization of Eugenol and Isoeugenol: Two Sides of the Same Coin?

    Yannick Port-Lougarre, Christophe Gourlaouen, Bertrand Vileno, Elena Gimenez-Arnau
    Chemical Research in Toxicology, In press, 36 (11), pp.1804-1813. ⟨10.1021/acs.chemrestox.3c00263⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Eugenol and isoeugenol are well acknowledged to possess antioxidant and thus cytoprotective activities. Yet both compounds are also important skin sensitizers, compelling the cosmetics and fragrance industries to notify their presence in manufactured products. While being structurally very similar, they show significant differences in their sensitization properties. Consequently, eugenol and isoeugenol have been the subject of many mechanistic studies where final oxidation forms, electrophilic ortho-quinone and quinone methide, are blamed as the reactive species forming the antigenic complex with nucleophilic residues of skin proteins inducing skin sensitization. However, radical mechanisms could compete with such electrophilic-nucleophilic pathway. The antioxidant activity results from neutralising reactive oxygen radicals by release of the phenolic hydrogen atom. The so-formed phenoxyl radicals can then fully delocalize upon the structure becoming potentially reactive towards skin proteins at several positions. To obtain in-depth insights of such reactivity we investigated in situ the formation of radicals from eugenol and isoeugenol using electron paramagnetic resonance combined with spin trapping in reconstructed human epidermis (RHE), mimicking human skin and closer to what may happen in vivo. Two modes of radical initiation were used, exposing RHE to (i) horseradish peroxidase (HRP), complementing RHE metabolic capacities and mimicking peroxidases present in vivo or (ii) solar light using a AM 1.5 solar simulator. In both experimental approaches, where the antioxidant character of both compounds is revealed, oxygen- and carbon-centred radicals were formed in RHE. Our hypothesis is that such carbon radicals are relevant candidates to form antigenic entities prior to conversion into electrophilic quinones. On this basis, these studies suggest that pro- or prehapten fingerprints could be advanced depending of the radical initiation method. The introduction of HRP suggested eugenol and isoeugenol behave as prohaptens, while exposed to light a prehapten nature could be highlighted.

  • Revisiting the pro-oxidant activity of copper: interplay of ascorbate, cysteine, and glutathione

    Enrico Falcone, Francesco Stellato, Bertrand Vileno, Merwan Bouraguba, Vincent Lebrun, Marianne Ilbert, Silvia Morante, Peter Faller
    Metallomics, 2023, 15 (7), pp.mfad040. ⟨10.1093/mtomcs/mfad040⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    Copper (Cu) is essential for most organisms, but it can be poisonous in excess, through mechanisms such as protein aggregation, trans-metallation, and oxidative stress. The latter could implicate the formation of potentially harmful reactive oxygen species (O2•−, H2O2, and HO•) via the redox cycling between Cu(II)/Cu(I) states in the presence of dioxygen and physiological reducing agents such as ascorbate (AscH), cysteine (Cys), and the tripeptide glutathione (GSH). Although the reactivity of Cu with these reductants has been previously investigated, the reactions taking place in a more physiologically relevant mixture of these biomolecules are not known. Hence, we report here on the reactivity of Cu with binary and ternary mixtures of AscH, Cys, and GSH. By measuring AscH and thiol oxidation, as well as HO• formation, we show that Cu reacts preferentially with GSH and Cys, halting AscH oxidation and also HO• release. This could be explained by the formation of Cu-thiolate clusters with both GSH and, as we first demonstrate here, Cys. Moreover, we observed a remarkable acceleration of Cu-catalyzed GSH oxidation in the presence of Cys. We provide evidence that both thiol-disulfide exchange and the generated H2O2 contribute to this effect. Based on these findings, we speculate that Cu-induced oxidative stress may be mainly driven by GSH depletion and/or protein disulfide formation rather than by HO• and envision a synergistic effect of Cys on Cu toxicity.

  • Stable Luminescent [Cu(NN)(PP)] + Complexes Incorporating a β‐Cyclodextrin‐Based Diphosphane Ligand with Metal‐Confining Properties

    Tuan‐anh Phan, Nicola Armaroli, Alejandra Saavedra Moncada, Elisa Bandini, Béatrice Delavaux-Nicot, Jean‐françois Nierengarten, Dominique Armspach
    Angewandte Chemie International Edition, 2023, 62 (6), pp.e202214638. ⟨10.1002/anie.202214638⟩ | Publiée le 1 janvier 2023
    Article dans une revue

    A β-cyclodextrin-based diphosphane with metal-confining properties was efficiently synthesized thanks to an unprecedented Smiles-like rearrangement of diphenyl-(2-phosphanylphenyl)phosphane in the presence of excess n-BuLi. The cis-chelating bidentate ligand is capable of forming very stable heteroleptic [Cu(NN)(PP)]+ complexes in which a metal-bound diimine ligand (bpy, phen, or mmp) is located within the cyclodextrin cavity. As a result of ligand encapsulation, flattening of the metal tetrahedral geometry in the excited state is disfavored, thereby resulting in enhanced luminescent properties.

  • Dual‐Readout of the Mechanical Response of a bis‐Acridinium [2]Rotaxane

    Johnny Hu, Sonia Adrouche, Etienne S. Gauthier, Christophe Gourlaouen, Nolwenn Le Breton, Marco Cecchini, Sylvie Choua, Valérie Heitz, Henri-Pierre Jacquot de Rouville
    Chemistry - A European Journal, 2022, 28 (71), pp.e202202840. ⟨10.1002/chem.202202840⟩ | Publiée le 20 décembre 2022
    Article dans une revue

    A [2]rotaxane built around a multi-responsive bisacridinium macrocycle has been synthesized. Structural investigation has confirmed the interlocked nature of the molecule and MD simulations illuminated its conformational dynamics with atomic resolution. Both halochromic and redox switching properties were explored to shed light on the mechanical responses and electronic changes that occur in the bis-acridinium [2]rotaxane. The topology of the rotaxane led to different mechanical behaviors, upon addition of hydroxide ions or reduction, easily detected by UV/Vis spectroscopy and electrochemistry.

  • Quantum embedding of multi-orbital fragments using the block-Householder transformation

    Saad Yalouz, Sajanthan Sekaran, Emmanuel Fromager, Matthieu Saubanère
    The Journal of Chemical Physics, 2022, 157 (21), pp.214112. ⟨10.1063/5.0125683⟩ | Publiée le 7 décembre 2022
    Article dans une revue

    Recently, some of the authors introduced the use of the Householder transformation as a simple and intuitive method for embedding local molecular fragments [see Sekaran et al., Phys. Rev. B 104, 035121 (2021) and Sekaran et al., Computation 10, 45 (2022)]. In this work, we present an extension of this approach to the more general case of multi-orbital fragments using the block version of the Householder transformation applied to the one-body reduced density matrix, unlocking the applicability to general quantum chemistry/condensed matter physics Hamiltonians. A step-by-step construction of the block Householder transformation is presented. Both physical and numerical areas of interest of the approach are highlighted. The specific mean-field (noninteracting) case is thoroughly detailed as it is shown that the embedding of a given N spin–orbital fragment leads to the generation of two separated sub-systems: (1) a 2 N spin–orbitals “fragment+bath” cluster that exactly contains N electrons and (2) a remaining cluster’s “environment” described by so-called core electrons. We illustrate the use of this transformation in different cases of embedding scheme for practical applications. We particularly focus on the extension of the previously introduced Local Potential Functional Embedding Theory and Householder-transformed Density Matrix Functional Embedding Theory to the case of multi-orbital fragments. These calculations are realized on different types of systems, such as model Hamiltonians (Hubbard rings) and ab initio molecular systems (hydrogen rings).

  • A photo-switchable molecular capsule: sequential photoinduced processes

    Manjiri Choudhari, Jingjing Xu, Alasdair I. Mckay, Clement Guerrin, Craig Forsyth, Howard Z. Ma, Lars Goerigk, Richard A. J. O'Hair, Antoine Bonnefont, Laurent Ruhlmann, Stephane Aloise, Chris Ritchie
    Chemical Science, 2022, Chemical Science, 46 (13), pp.13732-13740. ⟨10.1039/d2sc04613j⟩ | Publiée le 4 décembre 2022
    Article dans une revue

    The metastable trilacunary heteropolyoxomolybdate [PMo9O31(py)3]3− – {PMo9}; py = pyridine) and the ditopic pyridyl bearing diarylethene (DAE) (C25H16N2F6S2) self-assemble via a facile ligand replacement methodology to yield the photo-active molecular capsule [(PMo9O31)2(DAE)3]6−. The spatial arrangement and conformation of the three DAE ligands are directed by the surface chemistry of the molecular metal oxide precursor with exclusive ligation of the photo-active antiparallel rotamer to the polyoxometalate (POM) while the integrity of the assembly in solution has been verified by a suite of spectroscopic techniques. Electrocyclisation of the three DAEs occurs sequentially and has been investigated using a combination of steady-state and time-resolved spectroscopies with the discovery of a photochemical cascade whereby rapid photoinduced ring closure is followed by electron transfer from the ring-closed DAE to the POM in the latent donor–acceptor system on subsequent excitation. This interpretation is also supported by computational and detailed spectroelectrochemical analysis. Ring-closing quantum yields were also determined using a custom quantum yield determination setup (QYDS), providing insight into the impact of POM coordination on these processes.

  • The extended star graph as a light-harvesting-complex prototype: excitonic absorption speedup by peripheral energy defect tuning

    Saad Yalouz, Vincent Pouthier
    Physical Review E , 2022, 106 (6), pp.064313. ⟨10.1103/PhysRevE.106.064313⟩ | Publiée le 1 décembre 2022
    Article dans une revue

    We study the quantum dynamics of a photo-excitation uniformly distributed at the periphery of an extended star network (with NB branches of length LB). More specifically, we address here the question of the energy absorption at the core of the network and how this process can be improved (or not) by the inclusion of peripheral defects with a tunable energy amplitude ∆. Our numerical simulations reveal the existence of optimal value of energy defect ∆ * which depends on the network architecture. Around this value, the absorption process presents a strong speedup (i.e. reduction of the absorption time) provided that LB ≤ L * B with L * B ≈ 12.5/ ln(NB). Analytical/numerical developments are then conducted to interpret this feature. We show that the origin of this speedup takes place in the hybridization of two upper-band excitonic eigenstates. This hybridization is important when LB ≤ L * B and vanishes almost totally when LB > L * B. These structural rules we draw here could represent a potential guide for the practical design of molecular nano-network dedicated to the realisation of efficient photo-excitation absorption.

  • Dating of a ring on one of the largest known Roman iron anchors (La Grande-Motte, France): Combined metal and organic material radiocarbon analysis

    Sébastien Berthaut-Clarac, Emmanuel Nantet, Stéphanie Leroy, Emmanuelle Delque-Količ, Marion Perron, Pierre Adam, Philippe Schaeffer, Céline Kerfant
    Journal of Archaeological Science: Reports, 2022, 46, pp.103693. ⟨10.1016/j.jasrep.2022.103693⟩ | Publiée le 1 décembre 2022
    Article dans une revue

    Underwater operations conducted along the southern French coast have unveiled two large, isolated anchors of iron. The largest ever found in the ancient Mediterranean, they reveal that Roman merchantmen moored in Aigues-Mortes Bay. A combination of analyses focusing on the ring, which belonged to one of the two anchors, offered the opportunity to collect data from isolated anchors and to document their production. Radiocarbon analysis, conducted for the first time on this type of object, determined that they were manufactured in the early imperial period. Another key discovery was a layer of fibers found in a concretion from the ring, which revealed rare remnants of ropes impregnated with pitch that could correspond to puddening. The replication of similar analyses on rings belonging to other anchors would provide a better understanding of this crucial component for ancient mooring.

  • Genetic and physiological insights into the diazotrophic activity of a non-cyanobacterial marine diazotroph

    Aurélie Joublin-Delavat, Katia Touahri, Pauline Crétin, Amandine Morot, Sophie Rodrigues, Bruno Jesus, Florian Trigodet, François Delavat
    Environmental Microbiology, 2022, 24 (12), pp.6510-6523. ⟨10.1111/1462-2920.16261⟩ | Publiée le 1 décembre 2022
    Article dans une revue

    Nitrogen (N2) fixation, or diazotrophy, supports a large part of primary production in oceans. Culture-independent approaches highlighted the presence in abundance of marine non-cyanobacterial diazotrophs (NCD), but their ecophysiology remains elusive, mostly because of the low number of isolated NCD and because of the lack of available genetic tools for these isolates. Here, a dual genetic and functional approach allowed unveiling the ecophysiology of a marine NCD affiliated to the species Vibrio diazotrophicus. Physiological characterization of the first marine NCD mutant obtained so far was performed using a soft-gellan assay, demonstrating that a ΔnifH mutant is not able to grow in nitrogen-free media. Furthermore, we demonstrated that V. diazotrophicus produces a thick biofilm under diazotrophic conditions, suggesting biofilm production as an adaptive response of this NCD to cope with the inhibition of nitrogen fixation by molecular oxygen. Finally, the genomic signature of V. diazotrophicus is essentially absent from metagenomic data of Tara Ocean expeditions, despite having been isolated from various marine environments. We think that the genetically tractable V. diazotrophicus strain used in this study may serve as an ideal model to study the ecophysiology of these overlooked procaryotic group.

  • How Do Positions of Phosphito Units on a Calix[4]Arene Platform Affect the Enantioselectivity of a Catalytic Reaction?

    Shaima Hkiri, David Sémeril
    Organics, 2022, 3 (4), pp.470-480. ⟨10.3390/org3040030⟩ | Publiée le 1 décembre 2022
    Article dans une revue

    Three chiral diphosphites, (S,S)-5,17-bis(1,1′-binaphthyl-2,2′-dioxyphosphanyloxy)-25,26,27,28-tetrapropyloxycalix[4]arene (1), (S,S)-5,11,17,23-tetra-tert-butyl-25,27-dipropoxy-26,28-bis(1,1′-binaphthyl-2,2′-dioxyphosphanyloxy)calix[4]arene (2) and (S,S)-5,11,17,23-tetra-tert-butyl-25,26-dipropoxy-27,28-bis(1,1′-binaphthyl-2,2′-dioxyphosphanyloxy)calix[4]arene (3), based on conical calix[4]arene were investigated in the rhodium-catalyzed asymmetric hydrogenation of α-dehydroamino esters. High conversions were observed after 24 h under 5 bar of hydrogen whatever the employed diphosphite, and the chiral induction increases in the order 1 &lt; 3 &lt; 2. This may be due to the presence of the calix[4]arene moiety, which by its presence modifies the second coordination sphere of the catalytic center. The larger steric hindrance around the rhodium atom leads to the higher enantiomeric excess.

  • Phenoxy-Amidine Ligands: Toward Lactic Acid-Tolerant Catalysts for Lactide Ring-Opening Polymerization

    Valentin Vaillant-Coindard, Benjamin Théron, Gaël Printz, Florian Chotard, Cédric Balan, Yoann Rousselin, Philippe Richard, Iogann Tolbatov, Paul Fleurat-Lessard, Ewen Bodio, Raluca Malacea-Kabbara, Jérôme Bayardon, Samuel Dagorne, Pierre Le Gendre
    Organometallics, 2022, 41 (21), pp.2920-2932. ⟨10.1021/acs.organomet.2c00343⟩ | Publiée le 14 novembre 2022
    Article dans une revue

    The replacement of the imine functionality in the ubiquitous phenoxy-imine (FI) ligands by a more robust and do-nor N,N,N’-trisubstituted amidine function was examined and gave rise to the synthesis of five new phenoxy-amidine (FA) ligands (L1-L5). The solid-state structure of four proligands has been determined by X-ray diffraction analysis and showed that the amidine moiety is in trans-configuration. The reaction of the phenol-amidine proligands with AlMe3 afforded mon-onuclear (L1-L5)AlMe2 (1a-5a). A similar alkane elimination route was used from ZnEt2 and led to dinuclear [(L1-L5)ZnEt]2 complexes (1b-5b) or to homoleptic (L2/L4)2Zn complexes (2b’, 4b’) depending on the metal:ligand ratio used. The structure of these complexes has been determined by NMR spectroscopy (1H, 13C, HMBC, HSQC, DOSY, and NOESY experiments) and X-Ray diffraction study for seven of them. The crystal structure of the Al complexes showed FA ligands coordinated in a chelate fashion via the O atom of the aryloxy group and the imino-N atom indicating that the amidine function has undergone trans-cis isomerization upon coordination. A similar chelating coordination mode was observed for the FA ligands with Zn metal ions. These complexes were used as initiators for the ring-opening polymerization (ROP) of rac-lactide. FA-Zn complexes gave the best performance affording polylactic acid (PLA) with narrow molecular weight distribu-tion and heterotactic bias (Pr up to 0.75). Remarkably, some of these complexes were able to tolerate the presence of a large amount of lactic acid to the point of using it as a co-initiator during the polymerization reaction

  • Dithiocarbamate transfer reaction from methylene-bis(dithiocarbamates) to molybdenum dithiocarbamates in engine lubricants investigated using laboratory experiments

    Yu Min Kiw, Philippe Schaeffer, Pierre Adam, Benoît Thiébaut, Chantal Boyer
    New Journal of Chemistry, 2022, ⟨10.1039/d2nj04123e⟩ | Publiée le 4 novembre 2022
    Article dans une revue

    Elaboration of new engine oil specifications and growing level of environmental awareness have been calling for better fuel efficiency and reduction of carbon emissions. In this context, molybdenum dithiocarbamates (MoDTC) are important lubricant additives used to reduce friction coefficients and hence to improve fuel economy. It has been recently shown that under engine test conditions, the combined use of MoDTC and methylene-bis(dithiocarbamates) (MBDTC) leads to the prolonged existence of MoDTC complexes at useful levels in formulated engine oil due to ligand transfer reactions, resulting in the synergistic enhancement of tribological performances. In order to investigate the process of this ligand transfer at the molecular level in detail, laboratory ageing experiments involving MoDTC, MBDTC and zinc dithiophosphates (ZnDTP) – a combination of additives frequently used in formulated lubricants – in solution in hydrocarbon base oils were performed under thermal and thermo-oxidative conditions. The evolution of the concentrations of the substrates and of their transformation products were followed using HPLC-MS, Probe-MS analyses and NMR spectroscopy. It could be shown that Zn(II) complexes such as ZnDTP are able to induce dithiocarbamate (DTC) transfer reactions from MBDTC to MoDTC through a mechanism involving activation of carbon-sulfur bonds on MBDTC. Zn(II) ions act as a Lewis acid inducing the release of DTC from MBDTC. Oxidative conditions (NO2 in air) were also shown to induce the release of DTC from MBDTC, even in the absence of Zn(II) ions, which then become available for ligand exchange with MoDTC or for re-complexation of the metal core of Mo complexes (Mo2O2S2 or Mo oxysulfides) after partial oxidative degradation of the genuine MoDTC ligands.

  • Quantum Advantage in a Molecular Spintronic Engine that Harvests Thermal Fluctuation Energy

    Bhavishya Chowrira, Lalit Kandpal, Mathieu Lamblin, Franck Ngassam, Charles‐ambroise Kouakou, Talha Zafar, Damien Mertz, Bertrand Vileno, Christophe Kieber, Gilles Versini, Benoit Gobaut, Loïc Joly, Tom Ferté, Elmer Monteblanco, Armel Bahouka, Romain Bernard, Sambit Mohapatra, Helena Prima Garcia, Safaa Elidrissi, Miguel Gavara, Emmanuel Sternitzky, Victor da Costa, Michel Hehn, François Montaigne, Fadi Choueikani, Philippe Ohresser, Daniel Lacour, Wolfgang Weber, Samy Boukari, Mebarek Alouani, Martin Bowen
    Advanced Materials, 2022, pp.2206688. ⟨10.1002/adma.202206688⟩ | Publiée le 3 novembre 2022
    Article dans une revue

    Recent theory and experiments have showcased how to harness quantum mechanics to assemble heat/information engines with efficiencies that surpass the classical Carnot limit. So far, this has required atomic engines that are driven by cumbersome external electromagnetic sources. Here, using molecular spintronics, an implementation that is both electronic and autonomous is proposed. The spintronic quantum engine heuristically deploys several known quantum assets by having a chain of spin qubits formed by the paramagnetic Co center of phthalocyanine (Pc) molecules electronically interact with electron-spin-selecting Fe/C60 interfaces. Density functional calculations reveal that transport fluctuations across the interface can stabilize spin coherence on the Co paramagnetic centers, which host spin flip processes. Across vertical molecular nanodevices, enduring dc current generation, output power above room temperature, two quantum thermodynamical signatures of the engine's processes, and a record 89% spin polarization of current across the Fe/C60 interface are measured. It is crucially this electron spin selection that forces, through demonic feedback and control, charge current to flow against the built-in potential barrier. Further research into spintronic quantum engines, insight into the quantum information processes within spintronic technologies, and retooling the spintronic-based information technology chain, can help accelerate the transition to clean energy.

  • Exploring interaction modes between polysaccharide-based selectors and biologically active 4,4′-bipyridines by experimental and computational analysis

    Roberto Dallocchio, Alessandro Dessì, Barbara Sechi, Bezhan Chankvetadze, Sergio Cossu, Victor Mamane, Emmanuel Aubert, Carla Rozzo, Giuseppe Palmieri, Ylenia Spissu, Paola Peluso
    Journal of Chromatography Open, 2022, 2, pp.100030. ⟨10.1016/j.jcoa.2022.100030⟩ | Publiée le 1 novembre 2022
    Article dans une revue

    In the last few years, chiral 4,4 ′-bipyridine derivatives have been developed for different applications in catalysis, enantioseparation science, supramolecular and theoretical chemistry by modulating the activity of the molecular system through the introduction of specific substituents in the heteroaromatic scaffold. More recently, the biological activity of 2 ′-substituted-3,3 ′ ,5,5 ′-tetrachloro-2-iodo-4,4 ′-bipyridines has been explored in the field of transthyretin (TTR) fibrillogenesis inhibition, and the anticancer cytotoxicity of some derivatives is currently under systematic investigation. In this frame, the high-performance liquid chromatography (HPLC) enantioseparation of four atropisomeric 2,2 ′-disubstituted-4,4 ′-bipyridines (R, R' = Ar, I), which contain multiple interaction sites, such as hydrogen bonding (HB) donors and acceptors, halogen bond (XB) donors, and-extended electronic clouds, was explored by using n-hexane (Hex)/2-propanol (2-PrOH) 90:10 v/v as a mobile phase (MP), and eight chiral columns with coated and immobilized amylose-and cellulose-based selectors. The impact of subtle structural variations of analytes and selectors on their mutual intermolecular interactivity was evaluated in terms of retention (k) and selectivity () factors. On this basis, chromatographic analysis based on systematic screening of analytes and selectors was integrated with electrostatic potential (V) analysis and molecular dynamics (MD) simulations as computational techniques. The effect of temperature on retention, selectivity, and enantiomer elution order (EEO) of the analytes with coated and immobilized amylose tris (3,5-dimethylphenylcarbamate) was also considered by comparing the variation of the thermodynamic profile associated with each enantioseparation. Chromatographic responses proved to be strictly dependent on specific regions within the analyte, and functions of different interactions sites of the analytes as the structure of the chiral selector changes were significantly disclosed.

  • Dinuclear Silver(I) and Gold(I) Complexes with Chiral Oxazoline-NHC Ligands

    Marie Hoffmann, Samuel Dagorne, Patrick Pale, Aurélien Blanc, Pierre de Frémont
    Journal of Organometallic Chemistry, 2022, 979, pp.122507. ⟨10.1016/j.jorganchem.2022.122507⟩ | Publiée le 1 novembre 2022
    Article dans une revue

    The chemistry of chiral NHC-oxazoline bidentate ligands was investigated in silver(I) and gold(I) chemistries yielding stable dinuclear cationic complexes with good yields via coordination of the oxazoline heterocycle. Upon full characterization, the reactivity of the gold(I) complexes was assessed in homogeneous catalysis and under oxidative conditions.

  • Encapsulated Neutral Ruthenium Catalyst for Substrate‐Selective Oxidation of Alcohols

    Shaima Hkiri, Maxime Steinmetz, Rachel Schurhammer, David Sémeril
    Chemistry - A European Journal, 2022, 28 (58), ⟨10.1002/chem.202201887⟩ | Publiée le 18 octobre 2022
    Article dans une revue

    The neutral complex dichloro‐{diethyl[(5‐phenyl‐1,3,4‐oxadiazol‐2‐ylamino)‐(4‐trifluoro‐methylphenyl)methyl]phosphonate} ( p ‐cymene)‐ruthenium(II) was encapsulated inside a self‐assembled hexameric host obtained upon reaction of 2,8,14,20‐tetra‐undecyl‐resorcin[4]arene and water. The formation of an inclusion complex was inferred from a combination of spectral measurements (MS, UV/Vis spectroscopy, 1 H and DOSY NMR). The 31 P and 19 F NMR spectra are consistent with motions of the ruthenium complex inside the self‐assembled capsule. Molecular dynamics simulations carried out on the inclusion complex confirmed these intra‐cavity movements and highlighted possible supramolecular interactions between the ruthenium first coordination sphere ligands and the inner part (aromatic rings) of the capsule. The embedded ruthenium complex was assessed in the catalytic oxidation (using NaIO 4 as oxidant) of mixtures of three arylmethyl alcohols into the corresponding aldehydes. The reaction kinetics were shown to vary as a function of the substrates’ size, with the oxidation rate varying in the order benzylalcohol &gt;4‐phenyl‐benzylalcohol &gt;9‐anthracenemethanol. Control experiments realized in the absence of hexameric capsule did not allow any discrimination between the substrates.

  • Stochastic Multi Configuration Time-Dependent Hartree for Dissipative Quantum Dynamics with Strong Intramolecular Coupling

    Souvik Mandal, Fabien Gatti, Oussama Bindech, Roberto Marquardt, Jean Christophe Tremblay
    The Journal of Chemical Physics, 2022, 157 (14), pp.144105. ⟨10.1063/5.0105308⟩ | Publiée le 14 octobre 2022
    Article dans une revue

    In this article, we explore the dissipation dynamics of a strongly coupled multidimensional system in contact with a Markovian bath following a system-bath approach. We use in this endeavour the recently developed stochastic Multi-Configuration Time-Dependent Hartree approach within the Monte Carlo wave packet formalism [J. Chem. Phys. 156, 094109 (2022)]. The method proved to yield thermalized ensembles of wave packets when intramolecular coupling is weak. To treat strongly coupled systems, new Lindblad dissipative operators are constructed as linear combinations of the system coordinates and associated momenta. These are obtained by an unitary transformation to a normal mode representation, which reduces intermode coupling up to second order. Additionally, we use combinations of generalized raising/lowering operators to enforce the Boltzmann distribution in the dissipation operators, which yield perfect thermalization in the harmonic limit. The two ansatz are tested using a model two-dimensional hamiltonian parameterized to disentangle the effects of intramolecular potential coupling, of strong mode mixing observed in Fermi resonances, and of anharmonicity.

  • Lateral fenestrations in the extracellular domain of the glycine receptor contribute to the main chloride permeation pathway

    Adrien H Cerdan, Laurie Peverini, Jean-Pierre Changeux, Pierre-Jean Corringer, Marco Cecchini
    Science Advances , 2022, 8 (41), pp.eadc9340. ⟨10.1126/sciadv.adc9340⟩ | Publiée le 14 octobre 2022
    Article dans une revue

    Glycine receptors (GlyR) are ligand-gated ion channels mediating signal transduction at chemical synapses. Since the early patch-clamp electrophysiology studies, the details of the ion permeation mechanism have remained elusive. Here, we combine molecular dynamics simulations of a zebrafish GlyR-⍺1 model devoid of the intracellular domain with mutagenesis and single-channel electrophysiology of the full-length human GlyR-⍺1. We show that lateral fenestrations between subunits in the extracellular domain provide the main translocation pathway for chloride ions to enter/exit a central water-filled vestibule at the entrance of the transmembrane channel. In addition, we provide evidence that these fenestrations are at the origin of current rectification in known anomalous mutants and design de novo two inward-rectifying channels by introducing mutations within them. These results demonstrate the central role of lateral fenestrations on synaptic neurotransmission. Teaser Extracellular chloride ions access the glycine receptor pore via lateral fenestrations outdating the standard apical model.

  • Red Light‐Responsive Upconverting Nanoparticles for Quantitative and Controlled Release of a Coumarin‐Based Prodrug

    Anaïs Brion, Juliane Chaud, Jérémie Léonard, Frédéric Bolze, Stefan Chassaing, Benoît Frisch, Béatrice Heurtault, Antoine Kichler, Alexandre Specht
    Advanced Healthcare Materials, 2022, pp.2201474. ⟨10.1002/adhm.202201474⟩ | Publiée le 12 octobre 2022
    Article dans une revue

    Photolytic reactions allow the optical control of the liberation of biological effectors by photolabile protecting groups. The development of versatile technologies enabling the use of deep-red or NIR light excitation still represents a challenging issue, in particular for light-induced drug release (eg; light induced prodrug activation). Here, we present light-sensitive biocompatible lipid nanocapsules able to liberate an antitumoral drug through photolysis. We demonstrate that original photon upconverting nanoparticles (LNC-UCs) chemically conjugated to a coumarin-based photocleavable linker can quantitatively and efficiently release a drug by upconversion luminescence-assisted photolysis using a deep-red excitation wavelength. In addition, we were also able to demonstrate that such nanoparticles are stable in the dark, without any drug leakage in the absence of light. These findings open new avenues to specifically liberate diverse drugs using deep- red or NIR excitations for future therapeutic applications in nanomedicine.

  • Going up the ladder: Stacking four 4,4'-bipyridine moieties within a Ti(IV)-based tetranuclear architecture

    Jean Joseph, Pierre Mobian, Alain Chaumont, Jennifer Wytko, Jean Weiss
    Inorganic Chemistry, 2022, 61 (41), pp.16448-16457. ⟨10.1021/acs.inorgchem.2c02566⟩ | Publiée le 6 octobre 2022
    Article dans une revue

    Biphenol-based ligands have proven their ability to bind titanium(IV) centers and generate sophisticated self-assembled structures in which auxiliary nitrogen ligands often complete the coordination sphere of the metal and improve stability. Here, a central 4,4'bipyridine, which acts both as a spacer and a source of monodentate nitrogen to complete the coordination sphere of the Ti(IV) complex, was incorporated within two bis-2,2'-biphenol strands, 3H4 and 4H4. Both proligands possess structural features that are well adapted to form selfassembled structures built from titanium-oxygen-nitrogen units; however, their different degrees 2 of torsional freedom highly influenced the nuclearity of the complexes formed. The presence of a phenyl spacer between the bipyridine and the biphenol moieties of 3H4 provided enough flexibility for the ligand to wrap around one titanium(IV) center to form a mononuclear complex Ti(3)(DMF)2 in the presence of DMF. Assembly of the more rigid ligand 4H4 with Ti(OiPr)4 afforded a tetranuclear complex Ti4(4)2(4H)2(OEt)2 containing four stacked 4,4'-bipyridine units as shown by the X-ray structure of the complex. DFT studies suggested that the assembly of this tetrametallic complex involves a dimetallic intermediate with TiO6 nodes that is converted to the thermodynamically stable tetranuclear complex with two TiO6 nodes and two TiO5N units with enhanced covalent character.

  • Why the Ala-His-His Peptide Is an Appropriate Scaffold to Remove and Redox Silence Copper Ions from the Alzheimer’s-Related Aβ Peptide

    Paulina Gonzalez, Laurent Sabater, Emilie Mathieu, Peter Faller, Christelle Hureau
    Biomolecules, 2022, 12 (10), pp.1327. ⟨10.3390/biom12101327⟩ | Publiée le 1 octobre 2022
    Article dans une revue

    The progressive, neurodegenerative Alzheimer’s disease (AD) is the most widespread dementia. Due to the ageing of the population and the current lack of molecules able to prevent or stop the disease, AD will be even more impactful for society in the future. AD is a multifactorial disease, and, among other factors, metal ions have been regarded as potential therapeutic targets. This is the case for the redox-competent Cu ions involved in the production of reactive oxygen species (ROS) when bound to the Alzheimer-related Aβ peptide, a process that contributes to the overall oxidative stress and inflammation observed in AD. Here, we made use of peptide ligands to stop the Cu(Aβ)-induced ROS production and we showed why the AHH sequence is fully appropriate, while the two parents, AH and AAH, are not. The AHH peptide keeps its beneficial ability against Cu(Aβ)-induced ROS, even in the presence of ZnII-competing ions and other biologically relevant ions. The detailed kinetic mechanism by which AHH could exert its action against Cu(Aβ)-induced ROS is also proposed.

  • A gold( i )-catalysed approach towards harmalidine an elusive alkaloid from Peganum harmala

    Solène Miaskiewicz, Jean-Marc Weibel, Patrick Pale, Aurélien Blanc
    RSC Advances, 2022, 12 (41), pp.26966-26974. ⟨10.1039/D2RA05685B⟩ | Publiée le 16 septembre 2022
    Article dans une revue

    Upon gold catalysis, the 2,3-dihydropyrrolo[1,2-a]indole motif, encountered in few but interesting bioactive natural products, was efficiently obtained from N-aryl 2-alkynylazetidine derivatives. In an attempt to apply this methodology to the synthesis of harmalidine, isolated from the seeds of Peganum harmala, advanced amino 2,3-hydropyrrolo[1,2-a]indol(one) derivatives were readily obtained in only 11 steps from but-3-yn-1-ol. While the reported structure of harmalidine could not be reached from these intermediates, a surprising 12-membered diimino dimer was isolated. Extensive comparison of the reported harmalidine NMR data to the experimental and calculated data of our synthetic molecules, harmaline or the synthetised N-methylharmaline show discrepancies with the proposed natural product structure.

  • Activation Barriers of Co(IV)-centered Reductive-Elimination Correlate with Quantified Interatomic Noncovalent Interactions.

    Lucas Loir-Mongazon, Carmen Antuña-Hörlein, Christophe Deraedt, Yann Cornaton, Jean-Pierre Djukic
    SYNLETT, In press, ⟨10.1055/s-00000083⟩ | Publiée le 7 septembre 2022
    Article dans une revue

    In this joint theoretical and experimental study, the analysis of weak interligand noncovalent interactions within Co(IV) [Cp*Co(phpy)X]+ cobaltacycles (phpy = 2-phenylenepyridine, κC,N) was carried out using the the Independent Gradient Model/Intrinsic Bond Strength Index (IGM/IBSI) method to evaluate the dependency of the catalytically desired reductive elimination pathway (RE) on the nature of the -X ligand. It is shown that the barrier of activation of the RE pathway correlates directly with the IBSI of the X-to-carbanionic chelate’s carbon. This correlation suggests that the in silico prediction of which -X ligand is more prone to operate an efficient Cp*Co-catalyzed directed X-functionalization of aromatic C-H bond is at reach. A set of experiments staging various sources of -X ligands supports the theoretical conclusions.

  • Targeted modifications of neomycin and paromomycin: Towards resistance free antibiotics?

    J. Obszynski, H. Loidon, Aurélien Blanc, J.-M. Weibel, P. Pale
    Bioorganic Chemistry, 2022, 126, pp.105824. ⟨10.1016/j.bioorg.2022.105824⟩ | Publiée le 1 septembre 2022
    Article dans une revue

    Despite their clinical importance, saving numerous human lifes, over-and misuses of antibiotics has created a strong selective pressure on bacteria, which induces the emergence of (multi)resistant strains. Antibioresistance is becoming so pregnant that since 2017, WHO lists bacteria threatening most human health (AWaRe, ESKAPE lists), and those for which new antibiotics are urgently needed. Since the century turn, this context is leading to a burst in the chemical synthesis of new antibiotics, mostly derived from natural antibiotics. Among them, aminoglycosides, and especially the neomycin family, exhibit broad spectrum of activity and remain clinically useful drugs. Therefore, numerous endeavours have been undertaken to modify aminoglycosides with the aim of overcoming bacterial resistances. After having replaced antibiotic discovery into an historical perspective, briefly surveyed the aminoglycoside mode of action and the associated resistance mechanisms, this review emphasized the chemical syntheses performed on the neomycin family and the corresponding structure activity relationships in order to reveal the really efficient modifications able to convert neomycin and its analogues into future drugs. This review would help researchers to strategically design novel aminoglycoside derivatives for the development of clinically viable drug candidates.

  • Perfluoroaryl Zinc Catalysts Active in Cyclohexene Oxide Homopolymerization and Alternating Copolymerization with Carbon Dioxide

    Yuri C. A. Sokolovicz, Antonio Buonerba, Carmine Capacchione, Samuel Dagorne, Alfonso Grassi
    Catalysts, 2022, 12 (9), pp.970. ⟨10.3390/catal12090970⟩ | Publiée le 1 septembre 2022
    Article dans une revue

    The zinc complex Zn(C6F5)2(toluene) (1) behaves as a very active and selective catalyst in cyclohexene oxide (CHO) polymerization to produce poly(cyclohexene oxide) (PCHO) by the trans-ring-opening of CHO with remarkable TOF values at room temperature. The ring-opening copolymerization (ROCOP) of CO2 with CHO catalysed by 1 yields poly(cyclohexene carbonate) (PCHC) when using benzyl alcohol (BnOH) as an initiator at 120 °C. The 1H NMR monitoring of the in situ reaction of 1 with BnOH highlighted the formation of the dinuclear species [(C6F5)2Zn2(BnO)2 (2) that was isolated and found an active catalyst in the ROCOP of CO2 with CHO in the absence of initiators. Interestingly, PCHCs by 2 in solventless conditions show polydispersity index (Mw/Mn) values close to 2, corresponding to those expected for a single-site catalyst; on the contrary, a broader polydispersity index of the polymer products was found in toluene solution, suggesting the formation of new zinc catalysts during the polymerization reaction.

  • Noncanonical Strigolactone Analogues Highlight Selectivity for Stimulating Germination in Two Phelipanche ramosa Populations

    Suzanne Daignan Fornier, Alexandre de Saint Germain, Pascal Retailleau, Jean-Paul Pillot, Quentin Taulera, Lucile Andna, Laurence Miesch, Soizic Rochange, Jean-Bernard Pouvreau, François-Didier Boyer
    Journal of Natural Products, 2022, 85, pp.1976-1992. ⟨10.1021/acs.jnatprod.2c00282⟩ | Publiée le 26 août 2022
    Article dans une revue

    Strigolactones (SLs) are plant hormones exuded in the rhizosphere with a signaling role for the development of arbuscular mycorrhizal (AM) fungi and as stimulants of seed germination of the parasitic weeds Orobanche, Phelipanche, and Striga, the most threatening weeds of major crops worldwide. Phelipanche ramosa is present mainly on rape, hemp, and tobacco in France. P. ramosa 2a preferentially attacks hemp, while P. ramosa 1 attacks rapeseed. The recently isolated cannalactone (14) from hemp root exudates has been characterized as a noncanonical SL that selectively stimulates the germination of P. ramosa 2a seeds in comparison with P. ramosa 1. In the present work, (−)-solanacol (5), a canonical orobanchol-type SL exuded by tobacco and tomato, was established to possess a remarkable selective germination stimulant activity for P. ramosa 2a seeds. Two cannalactone analogues, named (±)-SdL19 and (±)-SdL118, have been synthesized. They have an unsaturated acyclic carbon chain with a tertiary hydroxy group and a methyl or a cyclopropyl group instead of a cyclohexane A-ring, respectively. (±)-SdL analogues are able to selectively stimulate P. ramosa 2a, revealing that these minimal structural elements are key for this selective bioactivity. In addition, (±)-SdL19 is able to inhibit shoot branching in Pisum sativum and Arabidopsis thaliana and induces hyphal branching in the AM fungus Rhizophagus irregularis, like SLs

  • Rhazinilam-Leuconolam Family of Natural Products: A Half Century of Total Synthesis

    Fatih Sirindil, Jean-Marc Weibel, Patrick Pale, Aurélien Blanc
    Natural Product Reports, 2022, 39 (8), pp.1574-1590. ⟨10.1039/D2NP00026A⟩ | Publiée le 17 août 2022
    Article dans une revue

    The rhazinilam family of natural products exhibits a main structure with a stereogenic quaternary carbon and a tetrahydroindolizine core imbedded within a 9-membered macrocycle, imposing axial chirality. This unique architecture combined with their taxol-like antimitotic activities have attracted various attentions, expecially from synthetic chemists, notably in the past decade. The present review describes the known total and formal syntheses of the members of the rhazinilam family (rhazinilam, rhazinal, leuconolam and kopsiyunnanines), according to the strategy developed.

  • Step-by-step from amorphous phosphate to nano-structured calcium hydroxyapatite: monitoring by solid-state 1 H and 31 P NMR and spin dynamics

    Vytautas Klimavicius, Arūnas Maršalka, Agne Kizalaite, Aleksej Zarkov, Aivaras Kareiva, Kęstutis Aidas, Jérôme Hirschinger, Vytautas Balevicius
    Physical Chemistry Chemical Physics, 2022, 24 (31), pp.18952-18965. ⟨10.1039/D2CP02108K⟩ | Publiée le 10 août 2022
    Article dans une revue

    The solid-state 1 H, 31 P NMR spectra and cross-polarization (CP MAS) kinetics in the series of samples containing amorphous phosphate phase (AMP), composite of AMP + nanostructured calcium hydroxyapatite (nano-CaHA) and high-crystalline nano-CaHA were studied under moderate spinning rates (5-30 kHz). The combined analysis of the solid-state 1 H and 31 P NMR spectra provides the possibility to determine the hydration numbers of the components and the phase composition index. A broad set of spin dynamics models (isotropic/anisotropic, relaxing/non-relaxing, secular/semi-non-secular) were applied and fitted to the experimental CP MAS data. The anisotropic model with the angular averaging of dipolar coupling was applied for AMP and nano-CaHA for the first time. It was deduced that the spin diffusion in AMP is close to isotropic, whereas it is highly anisotropic in nano

  • Autoxidized citronellol: free radicals as potential sparkles to ignite the fragrance induced skin sensitizing pathway

    Fatma Sahli, Bertrand Vileno, Christophe Gourlaouen, Elena Giménez-Arnau
    Food and Chemical Toxicology, 2022, 166, pp.113201. ⟨10.1016/j.fct.2022.113201⟩ | Publiée le 1 août 2022
    Article dans une revue

    Citronellol, one of the most used fragrance compounds worldwide, is one ingredient of Fragrance Mix II used to assess skin allergy to fragrances in dermatitis patients. Pure citronellol is nonallergenic. Main issue is it autoxidizes when exposed to air becoming then allergenic. The increased skin sensitizing potency of air-exposed citronellol has been attributed to the hydroperoxides detected at high concentrations in the oxidation mixtures. It has been postulated that such hydroperoxides can give rise to specific antigens, although chemical mechanisms involved and the pathogenesis are far from being unraveled. Hydroperoxides are believed to react with skin proteins through mechanisms involving radical intermediates. Here, insights on the potential radicals involved in skin sensitization to citronellol hydroperoxides are given. The employed tool is a multispectroscopic approach based on (i) electron paramagnetic resonance and spin trapping, that confirmed the formation of oxygenand carbon-radicals when exposing reconstructed human epidermis to concentrations of hydroperoxides close to those used for patch testing patients with air-oxidized citronellol; (ii) liquid chromatography-mass spectrometry, that proved the reaction with amino acids such as cysteine and histidine, known to be involved in radical processes and (iii) density functional theory calculations, that gave an overview on the preferential paths for radical degradation.

  • Towards Optimized Photoluminescent Copper(I) Phenanthroline-Functionalized Complexes: Control of the Photophysics by Symmetry-Breaking and Spin–Orbit Coupling

    Christophe Gourlaouen, Chantal Daniel
    Materials, 2022, 15 (15), pp.5222. ⟨10.3390/ma15155222⟩ | Publiée le 28 juillet 2022
    Article dans une revue

    The electronic and structural alterations induced by the functionalization of the 1,10-phenanthroline (phen) ligand in [Cu(I) (phen-R2)2]+ complexes (R=H, CH3, tertio-butyl, alkyl-linkers) and their consequences on the luminescence properties and thermally activated delay fluorescence (TADF) activity are investigated using the density functional theory (DFT) and its time-dependent (TD) extension. It is shown that highly symmetric molecules with several potentially emissive nearly-degenerate conformers are not promising because of low S1/S0 oscillator strengths together with limited or no S1/T1 spin–orbit coupling (SOC). Furthermore, steric hindrance, which prevents the flattening of the complex upon irradiation, is a factor of instability. Alternatively, linking the phenanthroline ligands offers the possibility to block the flattening while maintaining remarkable photophysical properties. We propose here two promising complexes, with appropriate symmetry and enough rigidity to warrant stability in standard solvents. This original study paves the way for the supramolecular design of new emissive devices.

  • Stereoselective Processes Based on σ-Hole Interactions

    Paola Peluso, Victor Mamane
    Molecules, 2022, 27, ⟨10.3390/molecules27144625⟩ | Publiée le 20 juillet 2022
    Article dans une revue

    The σ-hole interaction represents a noncovalent interaction between atoms with σ-hole(s) on their surface (such as halogens and chalcogens) and negative sites. Over the last decade, significant developments have emerged in applications where the σ-hole interaction was demonstrated to play a key role in the control over chirality. The aim of this review is to give a comprehensive overview of the current advancements in the use of σ-hole interactions in stereoselective processes, such as formation of chiral supramolecular assemblies, separation of enantiomers, enantioselective complexation and asymmetric catalysis. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY

  • A Single Bioinspired Hexameric Nickel Catechol–Alloxazine Catalyst Combines Metal and Radical Mechanisms for Alkene Hydrosilylation

    Agnideep Das, Jules Schleinitz, Lydia Karmazin, Bruno Vincent, Nolwenn Le Breton, Guillaume Rogez, Aurélie Guenet, Sylvie Choua, Laurence Grimaud, Marine Desage-El Murr
    Chemistry - A European Journal, 2022, 28 (35), pp.011417. ⟨10.1002/chem.202200596⟩ | Publiée le 21 juin 2022
    Article dans une revue

    Mechanisms combining organic radicals and metallic intermediates hold strong potential in homogeneous catalysis. Such activation modes require careful optimization of two interconnected processes: one for the generation of radicals and one for their productive integration towards the final product. We report that a bioinspired polymetallic nickel complex can combine ligand- and metal-centered reactivities to perform fast hydrosilylation of alkenes under mild conditions through an unusual dual radical- and metal-based mechanism. This earth-abundant polymetallic complex incorporating a catechol-alloxazine motif as redox-active ligand operates at low catalyst loading (0.25 mol%) and generates silyl radicals and a nickel-hydride intermediate through a hydrogen atom transfer (HAT) step. Evidence of an isomerization sequence enabling terminal hydrosilylation of internal alkenes points towards the involvement of the nickel-hydride species in chain walking. This single catalyst promotes a hybrid pathway by combining synergistically ligand and metal participation in both inner- and outer- sphere processes.

  • Synthesis of non-natural aza-iridoids via ynamides and molecular networking-based tracing of their in planta bioconversion

    Baptiste Moegle, Maxime Hourtoule, Clément Gommenginger, Asmaa Belabbes, Claire Villette, David Elser, Emmanuel Gaquerel, Nicolas Navrot, Laurence Miesch
    Journal of Organic Chemistry, 2022, 87 (11), pp.7229-7238. ⟨10.1021/acs.joc.2c00445⟩ | Publiée le 3 juin 2022
    Article dans une revue

    A synthesis of new-to-nature aza-iridoids via ynamides is presented. ZrCl 4 proved to be the best acid to perform this transformation. Various ynamides were accommodated, and seco-iridoids could be obtained as well. Aza-iridoids were infiltrated into leaves of Scrophularia Nodosa, an iridoid-producing plant species. High-resolution mass spectrometry coupled to computational metabolomics approaches was employed for the detection of aza-iridoid bioconversion products.

  • Irreversible Inhibition of IspG, a Target for the Development of New Antimicrobials, by a 2‐Vinyl Analogue of its MEcPP Substrate

    Vivien Herrscher, Clea Witjaksono, Marie Buchotte, Claire Ferret, Fabien Massicot, Jean-Luc Vasse, Franck Borel, Jean-Bernard Behr, Myriam Seemann
    Chemistry - A European Journal, 2022, 28 (30), pp.e202200241. ⟨10.1002/chem.202200241⟩ | Publiée le 25 mai 2022
    Article dans une revue

    IspG (also called GcpE) is an oxygen-sensitive [4Fe-4S] enzyme catalyzing the penultimate step of the methylerythritol phosphate (MEP) pathway, a validated target for drug development. It converts 2-C-methyl-d-erythritol-2,4-cyclo-diphosphate (MEcPP) into (E)-4-hydroxy-3-methyl-but-2-enyl-1-diphosphate (HMBPP). The reaction, assimilated to a reductive dehydration, involves redox partners responsible for the formal transfer of two electrons to substrate MEcPP. The 2-vinyl analogue of MEcPP was designed to generate conjugated species during enzyme catalysis, with the aim of providing new reactive centers to be covalently trapped by neighboring amino acid residues. The synthesized substrate analogue displayed irreversible inhibition towards IspG. Furthermore, we have shown that electron transfer occurs prior to inhibition; this might designate conjugated intermediates as probable affinity tags through covalent interaction at the catalytic site. This is the first report of an irreversible inhibitor of the IspG metalloenzyme.

  • A bulky and stable copper(I)-phenanthroline complex: impact of steric strain and symmetry on the excited state properties

    Lea Gimeno, Brian Phelan, Emily Sprague-Klein, Thierry Roisnel, Errol Blart, Christophe Gourlaouen, Lin Chen, Yann Pellegrin
    Inorganic Chemistry, 2022, 61 (19), pp.7296-7307. ⟨10.1021/acs.inorgchem.1c03901⟩ | Publiée le 16 mai 2022
    Article dans une revue

    The steric strain around copper(I) in typical [Cu(NNR)2] + complexes, where NNR is a diimine ligand substituted in α of the nitrogen atoms by R, is known to strongly impact the excited-state properties. Generally speaking, the larger R, the longer the emission lifetime and higher quantum yield. However, the stability of the coordination scaffold can be at stake if the steric strain imposed by R is too large. In this work, we explore a way of fine-tuning the steric strain around Cu(I) to reach a balance between high emission quantum yield and stability in a highly bulky copper(I) complex. Taking stable [Cu(dipp)2] + and unstable [Cu(dtbp)2] + (where dipp and dtbp are respectively 2,9-diisopropyl-1,10-phenanthroline and 2,9-ditert-butyl-1,10phenanthroline) as boundary of two least and most sterically strained structures, we designed and characterized non-symmetrical ligand 2-isopropyl-9-tert-butyl-1,10-phenanthroline (L1) and corresponding complex [Cu(L1)2] + (Cu1). The key experimental findings are that Cu1 exhibits a rigid tetrahedral geometry in the ground state, close to that of [Cu(dtbp)2] + and with an intermediate stability between that of [Cu(dipp)2] + and [Cu(dtbp)2] +. Conversely, the non-symmetrical nature of ligand L1 leads to a shorter emission lifetime and smaller quantum yield than either [Cu(dipp)2] + or [Cu(dtbp)2] +. This peculiar behavior is rationalized through the in depth analysis of the ultrafast dynamics of the excited state measured with optical transient absorption spectroscopy and theoretical calculations performed on the ground and excited state of Cu1. Our main findings are that the obtained complex is significantly more stable than [Cu(dtbp)2] + despite the sterically strained coordination sphere. The non-symmetrical nature of the ligand translates into a strongly distorted structure in the excited state. The distortion can be described as a rocking motion of one ligand, entailing the premature extinction of the excited state via several deactivation channels.

  • Novel thiophene-based donor–acceptor scaffolds as cathodes for rechargeable aqueous zinc-ion hybrid supercapacitors

    Haijun Peng, Yongxiang Zheng, Cyril Antheaume, Paolo Samorì, Artur Ciesielski
    Chemical Communications, 2022, 58 (47), pp.6689-6692. ⟨10.1039/D2CC02021A⟩ | Publiée le 13 mai 2022
    Article dans une revue

    Well-defined π-conjugated thiophene donor–acceptor molecules play an important role in different fields ranging from synthetic chemistry to materials science. Their chemical structure provides specific electronic and physicochemical properties, which can be further tuned by the introduction of functional groups. Herein, we design and synthesize two novel thiophene-based π-conjugated donor–acceptor molecules TDA-1 and TDA-2 through Aldol and Knoevenagel condensations. In our proof-of-concept study we report for the first time on the use of small organic molecules employed in aqueous zinc-ion hybrid supercapacitors (Zn-HSCs),which exhibit capacitance as high as 206.7 and 235.2 F g−1 for TDA-1, and TDA-2, respectively.

  • Novel oxygenated fossil nor-diterpenoids from Cretaceous amber (South-Western France) as potential markers from Cupressaceae and/or Cheirolepidiaceae

    Noelia de Lama Valderrama, Philippe Schaeffer, Agathe Leprince, Swann Schmitt, Pierre Adam
    Organic Geochemistry, 2022, 167, pp.104372. ⟨10.1016/j.orggeochem.2022.104372⟩ | Publiée le 1 mai 2022
    Article dans une revue

    In the frame of palaeobotanical studies aimed at identifying reliable molecular markers for the determination of the botanical origins of Cretaceous ambers, four diterpenoids from the amber from Archingeay (Charente-Maritime, South western France) were identified after chromatographic isolation and detailed nuclear magnetic resonance studies as 13-hydroxy-and 8,13 epoxy-nor-labdanoids. These compounds are structurally related to cupressic acid and torulosol, which are C-13 oxygenated labdanoids sometimes occurring as predominant constituents in resins from Cupressaceae s.l. and Araucariaceae. A diagenetic pathway leading from cupressic acid and torulosol to the fossil terpenoids is proposed. It involves incorporation of the parent diterpenoids into macromolecular constituents of amber during burial followed by the progressive release of the identified nor-labdanoids during maturation. The newly identified Version acceptée pour publication 2 nor-labdanoids might thus be considered as potential biomarker for amber originating from Cupressaceae s.l and/or Araucariaceae. Nevertheless, detailed investigation of the other terpenoid assemblages from the Archingeay amber points to an origin from Cupressaceae s.l.. However, since biomarkers exclusive to this botanical family have not been identified, the possibility that the amber originates from Cheirolepidiaceae is also considered.

  • One-Pot anti-Michael Regio- and Stereoselective Hydroamination of Activated N -Allenamides

    Maxime Hourtoule, Yongxiang Zheng, Anna Perfetto, Davide Luise, Ilaria Ciofini, Laurence Miesch
    Journal of Organic Chemistry, 2022, 87 (8), pp.5404-5411. ⟨10.1021/acs.joc.2c00302⟩ | Publiée le 15 avril 2022
    Article dans une revue

    N-Allenamides, substituted by an ester at the γ-position, were obtained through addition of terminal ynamides with ethyl diazoacetate under copper catalysis for the first time. Regio-and stereoselective hydroamination of those activated Nallenamides provided exclusively E-configured captodative enamimes through a one-pot anti-Michael addition. Numerous ynamides as well as various secondary amines were adapted in this process.

  • Direct borohydride fuel cells: A selected review of their reaction mechanisms, electrocatalysts, and influence of operating parameters on their performance

    Alexandr Oshchepkov, Antoine Bonnefont, Gaël Maranzana, Elena R Savinova, Marian Chatenet
    Current Opinion in Electrochemistry, 2022, 32, pp.100883. ⟨10.1016/j.coelec.2021.100883⟩ | Publiée le 1 avril 2022
    Article dans une revue

    Direct borohydride fuel cells (DBFC) oxidize an easily-stored energy-dense borohydride fuel (sodium borohydride: NaBH4), that in theory reacts ca. 400 mV below H2 and produce 8 electrons per BH4anion. However, the borohydride oxidation reaction (BOR) does not fully meet these promises in practice: the electrocatalyst nature, structure and state-of-surface, and the operating conditions (pH, BH4concentration, temperature, fluxes) noticeably influence the BOR kinetics and mechanism. Nickel and platinum-based catalysts both have assets for the BOR. DBFCs can only yield decent performance if their separator combines high ionconductivity and efficient separation of the reactants; cation-exchange membranes, anionexchange membranes, bipolar membranes and porous separators all have their own advantages and drawbacks. Besides the anode, the choice of separator must consider the DBFC cathode reaction, where oxygen (air) or hydrogen peroxide are reduced, provided adapted catalysts are used. All these aspects drive the DBFC performance and stability/durability.

  • Solid‐State Assembly by Chelating Chalcogen Bonding in Quinodimethane Tetraesters Fused with a Chalcogenadiazole

    Yusuke Ishigaki, Kota Asai, Henri‐pierre Jacquot de Rouville, Takuya Shimajiri, Johnny Hu, Valérie Heitz, Takanori Suzuki
    ChemPlusChem, 2022, 87 (4), pp.e202200075. ⟨10.1002/cplu.202200075⟩ | Publiée le 1 avril 2022
    Article dans une revue

    In contrast to p ‐quinodimethane tetraesters, which undergo facile polymerization due to their diradical character, newly synthesized 1 and 2 consisting of a chalcogenadiazole fused to a p ‐naphthoquinodimethane tetraester are thermodynamically stable due to butterfly‐shaped deformation. Such a folded molecular structure is also favorable for chalcogen bond (ChB) formation through intermolecular close contacts between a chalcogen atom (E: Se or S) and the oxygen atoms of ester groups in a crystal. The less‐explored chelating‐ChB through a C=O⋅⋅⋅E⋅⋅⋅O=C contact [Se⋅⋅⋅O: 2.94–3.37 Å] is the key supramolecular synthon for the formation of a one‐dimensional rod‐like assembly in a crystal, which is commonly observed in selenadiazole‐tetraesters ( 1 ) with OMe, OEt, and O i Pr groups. The formation of inclusion cavities between the rods shows that 1 could serve as solid‐state host molecules for clathrate formation, as found in a hexane‐solvated crystal. In contrast, thiadiazole‐tetraesters ( 2 ) are less suitable for the formation of a rod‐like assembly since the ChB involving S is less effective, and thus is overwhelmed by weak hydrogen bonds through C−H⋅⋅⋅O contacts.

  • Dipyridylamine-acetamide (Dpaa): A primary amine protecting group orthogonally cleavable under acidic conditions in the presence of t-butyloxycarbonyl (Boc) and t-butylester

    Aline Faucon, Françoise Hoegy, Noémie Werle, Christophe Gourlaouen, Gaëtan L.A. Mislin
    Tetrahedron Letters, 2022, 96, pp.153758. ⟨10.1016/j.tetlet.2022.153758⟩ | Publiée le 1 avril 2022
    Article dans une revue

    We show that dipyridylamine-acetamide (Dpaa), can be cleaved under mild acidic conditions (30% formic acid in dichloromethane). The release of the amine function is orthogonal to other acid-labile protecting groups. Calculations suggest that the ease of Dpaa cleavage relies on activation of the carbonyl function by the protonated dipyridylamine nitrogen and activation of a water molecule by a hydrogen-bond network.

  • Nicotinic receptors: From protein allostery to computational neuropharmacology

    Marco Cecchini, Jean-Pierre Changeux
    Molecular Aspects of Medicine, 2022, 84, pp.101044. ⟨10.1016/j.mam.2021.101044⟩ | Publiée le 1 avril 2022
    Article dans une revue

    We propose an extension and further development of the Monod-Wyman-Changeux model for allosteric transi- tions of regulatory proteins to brain communications and specifically to neurotransmitters receptors, with the nicotinic acetylcholine receptor (nAChR) as a model of ligand-gated ion channels. The present development of- fers an expression of the change of the gating isomerization constant caused by pharmacological ligand binding in terms of its value in the absence of ligands and several “modulation factors”, which vary with orthosteric lig- and binding (agonists/antagonists), allosteric ligand binding (positive allosteric modulators/negative allosteric modulators) and receptor desensitization. The new – explicit – formulation of such “modulation factors”, pro- vides expressions for the pharmacological attributes of potency, efficacy, and selectivity for the modulatory lig- ands (including endogenous neurotransmitters) in terms of their binding affinity for the active, resting, and de- sensitized states of the receptor. The current formulation provides ways to design neuroactive compounds with a controlled pharmacological profile, opening the field of computational neuro-pharmacology.

  • Deeper Understanding of Ternary Eutectic Carbonates/Ceria-Based Oxide Composite Electrolyte through Thermal Cycling

    André Grishin, Manel Ben Osman, Haïtam Meskine, Valérie Albin, Virginie Lair, Michel Cassir, Armelle Ringuedé
    Energies, 2022, 15 (7), pp.2688. ⟨10.3390/en15072688⟩ | Publiée le 1 avril 2022
    Article dans une revue

    Due to a high conductivity of about 0.1 S·cm−1, Li-Na-K carbonate eutectic and Sm-doped ceria composite material is a good electrolyte candidate for hybrid fuel cells operating between 500 °C and 600 °C. The present paper aims at a deeper understanding of the species and mechanisms involved in the ionic transport through impedance spectroscopy and thermal analyses, in oxidizing and reducing atmospheres, wet and dry, and during two heating/cooling cycles. Complementary structural analyses of post-mortem phases allowed us to evidence the irreversible partial transformation of molten carbonates into hydrogenated species, when water and/or hydrogen are added in the surrounding atmospheres. Furthermore, this modification was avoided by adding CO2 in anodic and/or cathodic compartments. Finally, a mechanistic model of such composite electrical behavior is suggested, according to the surrounding atmospheres used. It leads to the conclusions that cells based on this kind of electrolyte would preferably operate in molten carbonate fuel cell conditions, than in solid oxide fuel cell conditions, and confirms the name of “Hybrid Fuel Cells” instead of Intermediate Temperature (or even Low Temperature) Solid Oxide Fuel Cells.

  • The use of pseudo‐MRM for a sensitive and selective detection and quantification of polycyclic aromatic compounds by tandem mass spectrometry

    Mathieu Galmiche, Anaïs Rodrigues, Estelle Motsch, Olivier Delhomme, Yannis‐nicolas François, Maurice Millet
    Rapid Communications in Mass Spectrometry, 2022, 36 (13), ⟨10.1002/rcm.9307⟩ | Publiée le 30 mars 2022
    Article dans une revue

    Rationale: Multiple Reaction Monitoring (MRM) is a sensitive and selective detection mode for target trace-level analysis. However, it requires the fragmentation of labile bonds which are not present in molecules such as Polycyclic Aromatic Hydrocarbons (PAHs) and their heterocyclic derivatives (PANHs, PASHs). Methods: We present the application of an alternative tandem mass spectrometry (MS/MS) mode called "pseudo-MRM" for the GCMS/MS analysis of Polycyclic Aromatic Compounds (PACs). This mode is based on the monitoring of transitions with no mass loss between the precursor and the product ion. Pseudo-MRM peak areas were compared with those of classic MRM on three different mass spectrometers: two triple quadrupoles and an ion trap. Results: For all non-polar PACs studied here (PAHs, PANHs and PASHs), the pseudo-MRM transition was always the most intense. The classic MRM transitions exhibited peak areas 2 to 5 times lower. On the contrary, for the functionalized PACs (oxygenated and nitrated PAHs), classic MRM was favored over pseudo-MRM. These observations were confirmed on two triple quadrupoles (QqQs), and the real-world applicability of pseudo-MRM on QqQs was validated by the successful analysis of Diesel PM. However, a comparison with an ion trap showed that pseudo-MRM was never favored on that instrument, which caused fragmentation of non-polar PACs in MS/MS. Conclusions: The results of this study show an important gain in sensitivity when using pseudo-MRM instead of MRM for non-polar PACs on QqQ instruments. The selectivity of MRM is preserved in pseudo-MRM by applying non-zero collision energies to which only these non-polar PACs are resistant, not the isobaric interferences. No interference issue was observed when analyzing Diesel PM, a complex matrix, with our pseudo-MRM method. Therefore, we advise for a broader use of this MS/MS mode for trace-level determination of non-polar PAHs.

  • Photoinduced Arylation of Acridinium Salts: Tunable Photoredox Catalysts for C-O Bond Cleavage

    Yi-Xuan Cao, Gan Zhu, Yiqun Li, Nolwenn Le Breton, Christophe Gourlaouen, Sylvie Choua, Julien Boixel, Henri-Pierre Jacquot de Rouville, Jean-François Soulé
    Journal of the American Chemical Society, 2022, 144 (13), pp.5902-5909. ⟨10.1021/jacs.1c12961⟩ | Publiée le 22 mars 2022
    Article dans une revue

    A photoinduced arylation of N-substituted acridinium salts has been developed and has exhibited a high functional group tolerance (e.g., halogen, nitrile, ketone, ester, and nitro). A broad range of well-decorated C9-arylated acridinium-based catalysts with fine-tuned photophysical and photochemical properties, namely, excited-state lifetimes and redox potentials have been synthetized in a one-step procedure. These functionalized acridinium salts were later evaluated in the photoredox-catalyzed fragmentation of 1,2-diol derivatives (lignin models). Among them, 2-bromophenyl substituted N-methyl acridinium has outperformed all photoredox catalysts, including commercial Fukuzumi’s catalyst, for the selective C(β)O-Ar bond cleavage of diol monoarylethers to afford 1,2-diols in good yields.

  • Inorganic phosphate in growing calcium carbonate abalone shell suggests a shared mineral ancestral precursor

    Widad Ajili, Camila Tovani, Justine Fouassier, Marta de Frutos, Guillaume Laurent, Philippe Bertani, Chakib Djediat, Frédéric Marin, Stéphanie Auzoux-Bordenave, Thierry Azaïs, Nadine Nassif
    Nature Communications, 2022, 13 (1), pp.1496. ⟨10.1038/s41467-022-29169-9⟩ | Publiée le 21 mars 2022
    Article dans une revue

    Abstract The presence of phosphate from different origins (inorganic, bioorganic) is found more and more in calcium carbonate-based biominerals. Phosphate is often described as being responsible for the stabilization of the transient amorphous calcium carbonate phase. In order to specify the composition of the mineral phase deposited at the onset of carbonated shell formation, the present study investigates, down to the nanoscale, the growing shell from the European abalone Haliotis tuberculata , using a combination of solid state nuclear magnetic resonance, scanning transmission electron microscope and spatially-resolved electron energy loss spectroscopy techniques. We show the co-occurrence of inorganic phosphate with calcium and carbonate throughout the early stages of abalone shell formation. One possible hypothesis is that this first-formed mixed mineral phase represents the vestige of a shared ancestral mineral precursor that appeared early during Evolution. In addition, our findings strengthen the idea that the final crystalline phase (calcium carbonate or phosphate) depends strongly on the nature of the mineral-associated proteins in vivo.

  • Copper induces protein aggregation, a toxic process compensated by molecular chaperones

    Lisa Zuily, Nora Lahrach, Rosi Fassler, Olivier Geneste, Peter Faller, Olivier Sénèque, Yann Denis, Marie-Pierre Castanie-Cornet, Pierre Genevaux, Ursula Jakob, Dana Reichmann, Marie Thérèse Giudici-Orticoni, Marianne Ilbert
    mBio, 2022, 13 (2), pp.e03251-21. ⟨10.1128/mbio.03251-21⟩ | Publiée le 13 mars 2022
    Article dans une revue

    Copper is well known for its antimicrobial and antiviral properties. Under aerobic conditions, copper toxicity relies in part on the production of reactive oxygen species (ROS), especially in the periplasmic compartment. However, copper is significantly more toxic under anaerobic conditions, in which ROS cannot be produced. This toxicity has been proposed to arise from the inactivation of proteins through mismetallations. Here, using the bacterium Escherichia coli, we discovered that copper treatment under anaerobic conditions leads to a significant increase in protein aggregation. In vitro experiments using E. coli lysates and tightly controlled redox conditions confirmed that treatment with Cu$^+$ under anaerobic conditions leads to severe ROS-independent protein aggregation. Proteomic analysis of aggregated proteins revealed an enrichment of cysteine- and histidine-containing proteins in the Cu$^+$-treated samples, suggesting that nonspecific interactions of Cu$^+$ with these residues are likely responsible for the observed protein aggregation. In addition, E. coli strains lacking the cytosolic chaperone DnaK or trigger factor are highly sensitive to copper stress. These results reveal that bacteria rely on these chaperone systems to protect themselves against Cu-mediated protein aggregation and further support our finding that Cu toxicity is related to Cu-induced protein aggregation. Overall, our work provides new insights into the mechanism of Cu toxicity and the defense mechanisms that bacteria employ to survive.

  • Multidimensional stochastic dissipative quantum dynamics using a Lindblad operator

    Souvik Mandal, Fabien Gatti, Oussama Bindech, Roberto Marquardt, Jean-Christophe Tremblay
    The Journal of Chemical Physics, 2022, 156 (9), pp.094109. ⟨10.1063/5.0079735⟩ | Publiée le 7 mars 2022
    Article dans une revue

    In this paper, multidimensional dissipative quantum dynamics is studied within a system–bath approach in the Markovian regime using a model Lindblad operator. We report on the implementation of a Monte Carlo wave packet algorithm in the Heidelberg version of the Multi-Configuration Time-Dependent Hartree (MCTDH) program package, which is henceforth extended to treat stochastic dissipative dynamics. The Lindblad operator is represented as a sum of products of one-dimensional operators. The new form of the operator is not restricted to the MCTDH formalism and could be used with other multidimensional quantum dynamical methods. As a benchmark system, a two-dimensional coupled oscillators model representing the internal stretch and the surface–molecule distance in the O 2 /Pt(111) system coupled to a Markovian bath of electron–hole-pairs is used. The simulations reveal the interplay between coherent intramolecular coupling due to anharmonic terms in the potential and incoherent relaxation due to coupling to an environment. It is found that thermalization of the system can be approximately achieved when the intramolecular coupling is weak.

  • Two‐Coordinate NHC‐Supported Zn II Organocations: Steric and Electronic Tunability and Use in Alkyne Hydroboration Catalysis

    Refka Guermazi, David Specklin, Christophe Gourlaouen, Pierre de Frémont, Samuel Dagorne
    European Journal of Inorganic Chemistry, 2022, 2022 (6), pp.e202101002. ⟨10.1002/ejic.202101002⟩ | Publiée le 24 février 2022
    Article dans une revue

    We herein report on the synthesis, structure, and use in alkyne hydroboration catalysis of [(IPrCl)Zn−R]+ and [(ItBu)Zn−R]+ cations bearing IPrCl (IPrCl=1,3-bis[2,6-bis(1-methylethyl)phenyl]-4,5-dichloro-1,3-dihydro-imidazol-2-ylidene) and the sterically demanding ItBu carbene (ItBu=1,3-bis(1,1-dimethylethyl)−1,3-dihydro-imidazol-2-ylidene). Ionization of neutral precursors [(IPrCl)ZnR2] (1 a, R=Et; 1 b, R=Me) and [(ItBu)ZnEt2] (2) with one equivalent of [Ph3C][B(C6F5)4] led to with robust and stable two-coordinate ZnII cations [(IPrCl)Zn−R]+ (3 a, R=Et; 3 b, R=Me) and [(ItBu)Zn−Et]+ (4), respectively, all isolated as [B(C6F5)4]− salts. Further derivatization of alkyl cations 3 b and 4 by reaction with one equivalent of [B(C6F5)3] afforded cations [(IPrCl)Zn−C6F5]+ (5) and [(ItBu)Zn−C6F5]+ (6) as [B(C6F5)4]− salts, with cation 6 displaying a limited stability in solution. The molecular structures of cations 3 b, 4 and 5 were confirmed through X-ray diffraction studies. Among stable cations, Fluoride ion affinity (FIA) estimations agree with cation 5 being the most Lewis acidic in thus far reported [(IPrCl)Zn−R]+ cations. In the presence of pinacol borane and 1-octyne, cations 3 a–b, 5 and [(IPrCl)Zn−C6F5]+ (5 mol%) slowly catalyze the selective cis-hydroboration of 1-octyne to the vinylborane product A. Cation 5 also mediates 2-hexyne hydroboration to afford a mixture of hydroboration products B and C. In the case of hydroboration catalysis mediated by cations 5 and [(IPrCl)Zn−C6F5]+, experimental data and preliminary DFT calculations are consistent a Lewis-acid-type catalysis.

  • Highly Emissive Red Heterobimetallic Ir III /M I (M I = Cu I and Au I ) Complexes for Efficient Light-Emitting Electrochemical Cells

    Anna Bonfiglio, Pei-Wan Hsiao, Yin Chen, Christophe Gourlaouen, Quentin Marchand, Vincent César, Stéphane Bellemin-Laponnaz, Yun-Xin Wang, Chin-Wei Lu, Chantal Daniel, Federico Polo, Hai-Ching Su, Matteo Mauro
    Chemistry of Materials, 2022, 34 (4), pp.1756-1769. ⟨10.1021/acs.chemmater.1c03972⟩ | Publiée le 22 février 2022
    Article dans une revue

    A class of four bright heterobimetallic emitters is presented, which features both a chromophoric [Ir(C^N)2] center and a positively charged, linear bis-NHC M(I) ancillary moiety bridged through a Janus-type ligand. An in-depth investigation of their optical and electrochemical properties is also reported, which are further elucidated by means of time-dependent density functional theory including spin–orbital coupling effects. All complexes display efficient, vibrant red phosphorescence with a higher quantum yield and a faster radiative rate constant compared to the mononuclear parental complexes. This effect was elucidated in terms of better S–T excited-state mixing as well as increased rigidity favored by the multimetallic architecture. Finally, their electroluminescence performances are investigated by using these bimetallic complexes as electroactive materials in light-emitting electrochemical cells, achieving external quantum efficiency values up to 6% and resulting in among the most efficient ones for red emitters. This result is also attributable to the charge-neutral nature of an emitting Ir complex bearing a charged, wider energy gap, metal complex as an ancillary moiety.

  • Exchange bias at the organic/ferromagnet interface may not be a spinterface effect

    Garen Avedissian, Jacek Arabski, Jennifer A Wytko, Jean Weiss, Vasiliki Papaefthimiou, Guy Schmerber, Guillaume Rogez, Eric Beaurepaire, Christian Meny
    Applied Physics Reviews, 2022, 9 (1), pp.011417. ⟨10.1063/5.0054524⟩ | Publiée le 14 février 2022
    Article dans une revue

    Exchange bias is a physical effect that is used in many spintronic devices like magnetic read heads, MRAMS, and most kinds of magnetic sensors. For the next generation of fully organic devices, molecular exchange bias, if existing, could have a huge impact for developing mechanically soft and environment friendly devices. The observation of molecular exchange bias has been reported recently in hybrid systems where a metallic ferromagnet is exchanged biased by an organic film, and it is considered to be a spinterface effect. To understand this effect, we investigate if the molecular exchange bias exists in Co/metal tetra-phenyl porphyrin hybrid bilayer systems. Molecular exchange bias is never observed when the samples are properly encapsulated, and when exchange bias is eventually observed, it is not a spinterface effect, but it results from air-driven partial oxidation of the cobalt film transforming part of the metallic cobalt into a cobalt oxide that is well known to induce exchange bias effects. Surprisingly, oxidation is very difficult to prevent even by using very thick metallic encapsulating layers. A similar effect is observed in the Co/metal-phthalocyanine bilayer system showing that molecular exchange bias is not a spinterface effect also in the hybrid system in which this effect was originally discovered.

  • Temperature dependence of the Kirkwood correlation factor and linear dielectric constant of simple isotropic polar fluids

    Pierre-Michel Déjardin, Florian Pabst, Yann Cornaton, Andreas Helbling, Thomas Blochowicz
    Physical Review E , 2022, 105 (2), ⟨10.1103/PhysRevE.105.024108⟩ | Publiée le 8 février 2022
    Article dans une revue

    The theory developed in an accompanying paper [Déjardin, Phys. Rev. E 105, 024109 (2022)] is used to compute the Kirkwood correlation factor of simple polar fluids of different nature. From this calculation, the theoretical static permittivity is readily obtained, which is compared with experimental values. This is accomplished by fitting only one parameter accounting for induction or dispersion forces and torques, which is necessarily connected with the individual molecular polarizability but not explicitly related to the physical properties due to the nonadditivity of such energies. Excellent agreement between theoretical and experimental static permittivities is obtained over a very broad temperature range for a number of associated and nonassociated liquids. Finally, limitations of the present theory are given.

  • Membrane adaptation in the hyperthermophilic archaeon Pyrococcus furiosus relies upon a novel strategy involving glycerol monoalkyl glycerol tetraether lipids

    Maxime Tourte, Philippe Schaeffer, Vincent Grossi, Phil M. Oger
    Environmental Microbiology, 2022, 24 (4), pp.2029-2046. ⟨10.1111/1462-2920.15923⟩ | Publiée le 1 février 2022
    Article dans une revue

    Microbes preserve membrane functionality under fluctuating environmental conditions by modulating their membrane lipid composition. Although several studies have documented membrane adaptations in Archaea, the influence of most biotic and abiotic factors on archaeal lipid compositions remains underexplored. Here, we studied the influence of temperature, pH, salinity, the presence/absence of elemental sulfur, the carbon source, and the genetic background on the lipid core composition of the hyperthermophilic neutrophilic marine archaeon Pyrococcus furiosus. Every growth parameter tested affected the lipid core composition to some extent, the carbon source and the genetic background having the greatest influence. Surprisingly, P. furiosus appeared to only marginally rely on the two major responses implemented by Archaea, i.e., the regulation of the ratio of diether to tetraether lipids and that of the number of cyclopentane rings in tetraethers. Instead, this species increased the ratio of glycerol monoalkyl glycerol tetraethers (GMGT, aka. H-shaped tetraethers) to glycerol dialkyl glycerol tetrathers (GDGT) in response to decreasing temperature and pH and increasing salinity, thus providing for the first time evidence of adaptive functions for GMGT. Besides P. furiosus, numerous other species synthesize significant proportions of GMGT, which suggests that this unprecedented adaptive strategy might be common in Archaea.

  • Hierarchy in the cockpit: How captains influence the decision-making of young and inexperienced first officers

    Eve F Fabre, Nadine Matton, Frédéric Beltran, Valeria Baragona, Cerise Cuny, Jean-Paul Imbert, Stéphane Voivret, Jean-Baptiste van der Henst, Mickaël Causse
    Safety Science, 2022, 146, pp.105536. ⟨10.1016/j.ssci.2021.105536⟩ | Publiée le 1 février 2022
    Article dans une revue

    The present study aimed at investigating the extent to which Captains' risky decisions influence young and inexperienced First Officers. Participants (i.e., student pilots who had almost completed their training) had to decide, alone or in a crew configuration, whether to continue or abort the landing according to four risk levels (safe, moderately risky, highly risky and extremely risky). In the lone pilot configuration, they made their decisions by themselves, while in the crew configuration they were paired with a Captain who acted as a risk taker and almost always chose to land (except in extremely risky situations). The Captain's mere presence led participants to increase their risk-taking in moderately risky situations (before they even knew the Captain's decision), supposedly in an attempt to look competent and impress their superior. In reaction to the Captain's decision to land, participants also increased their risk-taking in highly risky situations. This tendency was positively correlated to the perceived authority of the Captain. Surprisingly, some participants sometimes insisted on continuing the landing in extremely risky situations after the Captain asked for a go-around, suggesting that some pilot students may greatly overestimate their piloting skills (i.e., Dunning Kruger effect). Some applications of the present experimental protocol as training for student pilots are proposed.

  • Are luminescent Ru 2+ chelated complexes selective coordinative sensors for the detection of heavy cations?

    Christophe Gourlaouen, Benjamin Schweitzer, Chantal Daniel
    Physical Chemistry Chemical Physics, 2022, 24 (4), pp.2309-2317. ⟨10.1039/D1CP04442G⟩ | Publiée le 26 janvier 2022
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    The ability of [Ru(bpy)2(bpym)]2+ (bpy = 2,2′-bipyridine; bpym = 2,2′-bipyrimidine) to probe specifically heavy cations has been investigated by means of density functional theory for transition metals, group 12 elements and Pb2+. On the basis of the calculated Gibbs free energies of complexation in water it is shown that all reactions are favorable with negative enthalpies except for Hg2+, with the transition metal cations forming stable bi-metallic complexes by coordination to the bpym ligand. Comparison between the optical and photophysical properties of the Ru2+ probe and those of the coordination compounds does not demonstrate a high selectivity due to very similar characteristics of the absorption and emission spectra. Whereas by complexation the lowest metal-to-ligand-charge-transfer (MLCT) shoulder of [Ru(bpy)2(bpym)]2+ at 462 nm is more or less shifted to the red as a function of the cation, the second MLCT band at 415 nm, less sensitive to the complexation, gains in intensity and is slightly blue-shifted. The visible MLCT emission of [Ru(bpy)2(bpym)]2+ at 706 nm is altered by complexation leading to near IR (800–900 nm) emission in most of the coordination compounds. Complexation to some transition metal cations (Fe, Co, Rh and Pd) generates low-lying metal-centered (MC) excited states that quench luminescence. In contrast to the conclusion of experimental findings by Kumar et al. (Chem. Commun. 2014, 50, 8488–8490), [Ru(bpy)2(bpym)]2+ cannot be proposed as a fast and selective probe for monitoring Pd2+ in aqueous media. Indeed, it does not possess the optical and photophysical characteristics necessary to discriminate Pd2+ ions over a variety of other cations.

  • The Reductive Dehydroxylation Catalyzed by IspH, a Source of Inspiration for the Development of Novel Anti-Infectives

    Hannah Jobelius, Gabriella Ines Bianchino, Franck Borel, Philippe Chaignon, Myriam Seemann
    Molecules, 2022, 27 (3), pp.708. ⟨10.3390/molecules27030708⟩ | Publiée le 21 janvier 2022
    Article dans une revue

    The non-mevalonate or also called MEP pathway is an essential route for the biosynthesis of isoprenoid precursors in most bacteria and in microorganisms belonging to the Apicomplexa phylum, such as the parasite responsible for malaria. The absence of this pathway in mammalians makes it an interesting target for the discovery of novel anti-infectives. As last enzyme of this pathway, IspH is an oxygen sensitive [4Fe-4S] metalloenzyme that catalyzes 2H+/2e- reductions and a water elimination by involving non-conventional bioinorganic and bioorganometallic intermediates. After a detailed description of the discovery of the [4Fe-4S] cluster of IspH, this review focuses on the IspH mechanism discussing the results that have been obtained in the last decades using an approach combining chemistry, enzymology, crystallography, spectroscopies, and docking calculations. Considering the interesting druggability of this enzyme, a section about the inhibitors of IspH discovered up to now is reported as well. The presented results constitute a useful and rational help to inaugurate the design and development of new potential chemotherapeutics against pathogenic organisms.

  • Mononucleoside phosphorodithiolates as mononucleotide prodrugs

    Nathalie Schlienger, Isabelle Lefebvre, Anne-Marie Aubertin, Suzanne Peyrottes, Christian Périgaud
    European Journal of Medicinal Chemistry, 2022, 227, pp.113914. ⟨10.1016/j.ejmech.2021.113914⟩ | Publiée le 5 janvier 2022
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    The synthesis and in vitro anti-HIV activity of a novel series of pronucleotides are reported. These prodrugs were characterized by a phosphorodithiolate structure, incorporating two O-pivaloyl-2-oxyethyl substituents as biolabile phosphate protections. The compounds were obtained following an original one-pot three-step procedure, involving the formation of a phosphorodithioite intermediate which is in situ oxidized. In vitro, comparative anti-HIV evaluations demonstrate that such original prodrugs are able to allow the efficient intracellular release of the corresponding 5 0-mononucleotide. The pronucleotide of 2 0 ,3 0-dideoxyadenosine (ddA) 3 exhibited a very potent antiretroviral effect with 50% effective concentration (EC 50) values in nanomolar concentration range in various cell lines. In primary monocytes/ macrophages, this derivative was 500 times more potent in inhibiting HIV replication (EC 50 0.23 pM) than ddA and the selectivity index of the prodrug is fifty times higher than the one of the parent nucleoside.

  • Influence of the Flexibility of Nickel PCP‐Pincer Complexes on C−H and P−C Bond Activation and Ethylene Reactivity: A Combined Experimental and Theoretical Investigation

    Fengkai He, Christophe Gourlaouen, Huan Pang, Pierre Braunstein
    Chemistry - A European Journal, 2022, 28 (10), ⟨10.1002/chem.202104234⟩ | Publiée le 5 janvier 2022
    Article dans une revue

    Using a pincer platform based on a bridgehead NHC donor with functional side arms, the combined effect of increased flexibility in six-membered pyrimidine-type heterocycles compared to the more often studied five-membered imidazole, and rigidity of phosphane side arms was examined. The unique features observed include: 1) the reaction of the azolium Csp2 -H bond with [Ni(cod)2 ] affording a carbanionic ligand in [NiCl(PCsp3 H P)] (8) rather than a carbene; 2) its transformation into the NHC, hydrido complex [NiH(PCNHC P)]PF6 (9) upon halide abstraction; 3) ethylene insertion into the Ni-H bond of the latter and ethyl migration to the N-C-N carbon atom of the heterocycle in [Ni(PCEt P)]PF6 (10); and 4) an unprecedented C-P bond activation transforming the P-CNHC -P pincer ligand of 8 in a C-CNHC -P pincer and a terminal phosphanido ligand in [Ni(PPh2 )(CCNHC P)] (15). The data are supported by nine crystal structure determinations and theoretical calculations provided insights into the mechanisms of these transformations, which are relevant to stoichiometric and catalytic steps of general interest.

  • Deciphering the Role of Noncovalent Interactions in the Conformations of Dibenzo‐1,5‐dichalcogenocines

    Robin Weiss, Yann Cornaton, Hassan Khartabil, Loïc Groslambert, Eric Hénon, Patrick Pale, Jean-Pierre Djukic, Victor Mamane
    ChemPlusChem, 2022, 87, pp.e202100518. ⟨10.1002/cplu.202100518⟩ | Publiée le 4 janvier 2022
    Article dans une revue

    A combined experimental and theoretical study is reported on the new dibenzo-1,5-ditellurocine 2-Te in order to get an overview on the parameters controlling conformational change and to explain the differences with sulfur and selenium analogues. The boat to chair conformer preference is revealed by DFT calculations. For 2-Te, a G value of about 3 kJ/mol was calculated, close to the value measured by NMR (5 kJ/mol). However, DFT calculations with implicit solvation effects could not clearly establish the presence of an intramolecular Te---HC noncovalent interaction (NCI), as observed in the solid state. The Independent Gradient Model (IGM) methodology discloses an existent but probably not sufficiently discriminating Te---HC NCI. It also confirms that van der Waals interactions between phenyl rings is a source of stabilization of the boat conformer. Furthermore, electrostatic potential analysis suggests that chalcogen bonds between Te -holes and solvent might play an important role.

  • On the Quantum Chemical Nature of Lead(II) "Lone Pair

    Christophe Gourlaouen, Jean-Philip Piquemal
    Molecules, 2022, 27 (1), pp.27. ⟨10.3390/molecules27010027⟩ | Publiée le 3 janvier 2022
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    We discuss the quantum chemical nature of the Lead(II) valence basins, sometime called the Lead “lone pair”. Using various chemical interpretation tools such as the molecular orbital analysis, Natural Bond Orbitals (NBO), Natural Population Analysis (NPA) and Electron Localization Function (ELF) topological analysis, we study a variety of Lead(II) complexes. A careful analysis of the results show that the optimal structures of the lead complexes are only govern by the 6s and 6p subshells whereas no involvement of the 5d orbitals is found. Similarly, we do not find any significant contribution of the 6d. Therefore, the Pb(II) complexation with its ligand can be explained through the interaction of the 6s2 electrons and the accepting 6p orbitals. We detail the potential structural and dynamical consequences of such electronic structure organization of the Pb (II) valence domain.

  • Enantioseparation of planar chiral ferrocenes on cellulosebased chiral stationary phases: benzoate versus carbamate pendant groups

    Roberto Dallocchio, Alessandro Dessì, Barbara Sechi, Bezhan Chankvetadze, Giorgi Jibuti, Sergio Cossu, Victor Mamane, Paola Peluso
    Electrophoresis, In press, ⟨10.1002/elps.202200205⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    In this study, the enantioseparation of fourteen planar chiral ferrocenes containing halogen atoms, and methyl, iodoethynyl, phenyl and 2-naphthyl groups, as substituents, was explored with a cellulose tris(4-methylbenzoate) (CMB)-based chiral column under multimodal elution conditions. n-Hexane/2-propanol (2-PrOH) 95:5 v/v, pure methanol (MeOH), and MeOH/water 90:10 v/v were used as mobile phases (MPs). With CMB, baseline enantioseparations were achieved for nine analytes with separation factors (α) ranging from 1.24 to 1.77, whereas only three analytes could be enantioseparated with 1.14 ≤ α ≤ 1.51 on a cellulose tris(3,5-dimethylphenylcarbamate) (CDMPC)-based column, used as a reference for comparison, under the same elution conditions. Pendant group-dependent reversal of the enantiomer elution order (EEO) was observed in several cases by changing CMB to CDMPC. The impact of analyte and CSP structure, and MP polarity on the enantioseparation was evaluated. The two cellulose-based CSPs featured by different pendant groups were also compared in terms of thermodynamics. For this purpose, enthalpy (ΔΔH°), entropy (ΔΔS°) and free energy (ΔΔG°) differences, isoenantioselective temperatures (Tiso) and enthalpy/entropy ratios (Q), associated with the enantioseparations, were derived from van ’t Hoff plots by using n-hexane/2-propanol 95:5 v/v and methanol/water 90:10 v/v as MPs. With the aim to disclose the functions of the different substituents in mechanisms and noncovalent interactions underlying analyte-selector complex formation at molecular level, electrostatic potential (V) analysis and molecular dynamics (MD) simulations were used as computational techniques. On this basis, enantioseparations and related mechanisms were investigated by integrating theoretical and experimental data

  • Comparative enantioseparation of planar chiral ferrocenes on polysaccharide‐based chiral stationary phases

    Alessandro Dessì, Barbara Sechi, Roberto Dallocchio, Bezhan Chankvetadze, Mireia Pérez- Baeza, Sergio Cossu, Victor Mamane, Patrick Pale, Paola Peluso
    Chirality, In press, ⟨10.1002/chir.23417⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    High-performance liquid chromatography (HPLC) enantioseparations of ten 1,2and 1,3-disubstituted planar chiral ferrocenes on five polysaccharide-based chiral stationary phases (CSPs) were comparatively explored under multimodal elution conditions. The presence of π-extended systems in the analyte structure was shown to impact affinity of the most retained enantiomer toward amylose-based selectors, observing retention times higher than 80 min with methanol-containing mobile phases (MPs).

  • NNO Pincer Ligand-Supported Palladium(II) Complexes: Direct Synthesis of Quinazolines via Acceptorless Double Dehydrogenative Coupling of Alcohols

    Balaji Sundarraman, Ramesh Rengan, David Semeril
    Organometallics, 2022, 41 (11), pp.1314-1324. ⟨10.1021/acs.organomet.2c00062⟩ | Publiée le 1 janvier 2022
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    A sustainable approach for the synthesis of substituted quinazolines by a sequential acceptorless dehydrogenative coupling of 2-aminobenzyl alcohol with alcohols using new Pd(II)-NNO pincer type complexes as catalysts. The airstable palladium(II) complexes with the general formula [Pd(L)(PPh3)] (where L = 4-substituted methyl 2pyrrolylbenzhydrazone ligands) have been synthesized and their compositions were recognized by analytical and spectral methods (FT-IR, NMR and HR-MS). Single crystal X-ray crystallography confirms the tridentate coordination of the ligands and the existence of square planar geometry around the metal ion. A wide range of substituted quinazoline derivatives has been synthesized from double dehydrogenation of benzyl alcohols by using 1.5 mol % of the catalyst loading with a maximum of 93% yield. The formation of an amino-benzaldehyde and benzaldehyde intermediates via double dehydrogenative coupling reaction was confirmed by control experiments.

  • Flexible Vertex Engineers the Controlled Assembly of Distorted Supramolecular Tetrahedral and Octahedral Cages

    Shu-Jin Bao, Ze-Ming Xu, Tian-Chen Yu, Ying-Lin Song, Heng Wang, Zheng Niu, Xiaopeng Li, Brendan F Abrahams, Pierre Braunstein, Jian-Ping Lang
    Research, 2022, 2022, pp.9819343. ⟨10.34133/2022/9819343⟩ | Publiée le 1 janvier 2022
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    Designing and building unique cage assemblies attract increasing interest from supramolecular chemists but remain synthetically challenging. Herein, we propose the use of a flexible vertex with adjustable angles to selectively form highly distorted tetrahedral and octahedral cages, for the first time, in which the flexible vertex forms from the synergistic effect of coordination and covalent interactions. The inherent interligand angle of the vertex can be modulated by guest anions present, which allows for the finetuning of different cage geometries. Furthermore, the reversible structural transformation between tetrahedral and octahedral cages was achieved by anion exchange monitored by mass spectrometric technique, the smaller anions favoring tetrahedral cages, while the larger anions supporting octahedral cages. Additionally, the KBr-based cage thin films exhibited prominent enhancement of their third-order NLO responses in two or three orders of magnitude compared to those obtained for their corresponding solutions. This work not only provides a new methodology to build irregular polyhedral structures in a controlled and tunable way but also provides access to new kinds of promising functional optical materials.

  • Regio- and Stereoselective Addition to gem -Difluorinated Ene–Ynamides: Access to Stereodefined Fluorinated Dienes

    Maxime Hourtoule, Laurence Miesch
    Organic Letters, 2022, 24 (21), pp.3896-3900. ⟨10.1021/acs.orglett.2c01593⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    The first synthesis of gem-difluorinated ene–ynamides is presented via deprotonation of trifluoromethylated N-allenamides and δ extrusion of fluorine. These highly reactive building blocks, owing to their dual functional groups, offer a unique entry to difluorinated dienes and to stereodefined, monofluoro-substituted dienes. Stereoselective addition to the ynamide moiety led to difluorinated dienes. A stereocontrolled domino δ elimination reaction followed by an addition/elimination sequence from trifluoromethylated N-allenamides provided exclusively stereodefined monofluorinated ene–ynamides

  • Molecular evidence for sulfurization of molybdenum dithiocarbamates (MoDTC) by zinc dithiophosphates: a key process in their synergetic interactions and the enhanced preservation of MoDTC in formulated lubricants?

    Yu Min Kiw, Pierre Adam, Philippe Schaeffer, Benoît Thiébaut, Chantal Boyer
    RSC Advances, 2022, 12 (6), pp.3542-3553. ⟨10.1039/D1RA08657J⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    Molybdenum dithiocarbamates (MoDTC) are widely used in automotive industries as lubricant additives to reduce friction and to enhance fuel economy. Sulfur-containing additives such as zinc dithiophosphates (ZnDTP) are proposed to play a key role in the improvement of friction reducing properties of MoDTC in formulated lubricants by facilitating the formation of MoS2 tribofilm at the rubbing contacts. This study focuses on the interactions between MoDTC and ZnDTP under conditions comparable with those prevailing in operating engines. The capacity of ZnDTP to sulfurize MoDTC in solution in a hydrocarbon base oil could be demonstrated. Sulfurized Mo complexes bearing one or two additional sulfur atoms (1S-MoDTC and 2S-MoDTC, respectively) which have replaced the genuine oxygen atom(s) from the MoDTC core were detected and quantified using a specifically developed HPLC-MS analytical method. A possible sulfurization mechanism relying on the higher affinity of phosphorus from ZnDTP for oxygen could be proposed. In parallel, the evolution and molecular transformation of the prepared 2S-MoDTC in hydrocarbon base oil under thermal and thermo-oxidative conditions were followed using HPLC-MS and compared with the evolution of their friction coefficients. 2S-MoDTC complexes were shown to exhibit a better retention of friction reducing capability under oxidative conditions than the "classical" MoDTC, although they did not seem to significantly reduce the friction coefficients of lubricants as compared to the "classical" MoDTC. Therefore, sulfurization of MoDTC by ZnDTP might contribute to delay the progressive consumption of MoDTC and the loss of their friction-reducing efficiency in lubricants under thermo-oxidative conditions.

  • Expanded Mercaptocalixarenes: A New Kind of Macrocyclic Ligands for Stabilization of Polynuclear Thiolate Clusters

    Frederik Schleife, Clément Bonnot, Jean-Claude Chambron, Martin Börner, Berthold Kersting
    Chemistry - A European Journal, 2022, ⟨10.1002/chem.202104255⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    The syntheses and properties of expanded 4-tert-butyl-mercapto-calix[4]arenes, in which the methylene linkers are replaced by -CH2NRCH2- or -CH2NRCH2- and CH2NRCH2CH2CH2NRCH2- units, are described. The new macrocycles were obtained in a step-wise manner, utilizing fully protected, i.e. S-alkylated, derivatives of the oxidation-sensitive thiophenols in the cyclisation steps. Reductive cleavage of the macrobicyclic or macrotricyclic intermediates (6, 7, 11) afforded the free thiophenols (H48, H49, and H412) in preparative yields as their hydrochloride salts. The protected proligands can exist in two conformations, resembling the “cone” and “1,3-alternate” conformations found for the parent calix[4]arenes. The free macro-cycles do not show conformational isomerism, but are readily oxidized forming intramolecular disulfide linkages. Preliminary complexation experiments show that these expanded mercaptocalixarenes can serve as supporting ligands for tetranuclear thiolato clusters.

  • Chalcogen Bonding with Diaryl Ditellurides: Evidence from Solid State and Solution Studies.

    Robin Weiss, Emmanuel Aubert, Loic Groslambert, Patrick Pale, Victor Mamane
    Chemistry - A European Journal, In press, ⟨10.1002/chem.202200395⟩ | Publiée le 1 janvier 2022
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    The chalcogen bonding (ChB) ability of Te is studied in symmetrical diaryl ditellurides ArTeTeAr. Among the two Te σ-holes, the one along the less polarized Te-Te bond was calculated as the more electropositive. This counter-intuitive situation is due to the hyperconjugation contribution from Te lone pair to the σ* of the adjacent Te which coincides with σ-hole along the more polarized Te-Ar bond. ArTeTeAr showed notable structural features in the solid state as a result of intermolecular Te···Te ChB, such as a Te 4 rectangle through dimer aggregation or a triangular Te 3 motif, where one Te interacts with both Te atoms of a neighboring molecule through both its σ-hole and lone pair, in a slightly frustrated geometry. Lewis acidity of ArTeTeAr was also evaluated by NMR with R 3 PO as σ-hole acceptors in different solvents. Thus, 125 Te NMR allowed monitoring Te···O interaction and delivering association constants ( K a ) for 1:1 adducts. The highest value of K a = 90 M -1 was measured for the adduct between ArTeTeAr bearing CF 3 groups and Et 3 PO in cyclohexane. Notably, by using n Bu 3 PO, Te···O interaction was revealed by 19 F- 1 H HOESY showing spatial proximity between CF 3 and CH 3 of n Bu 3 PO.

  • Unravelling functions of halogen substituents in the enantioseparation of dihalogenated ferrocenes on polysaccharide-based chiral stationary phases: experimental and electrostatic potential analyses

    Barbara Sechi, Alessandro Dessì, Carlo Gatti, Roberto Dallocchio, Bezhan Chankvetadze, Sergio Cossu, Victor Mamane, Patrick Pale, Paola Peluso
    Journal of Chromatography A, In press, ⟨10.1016/j.chroma.2022.463097⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    Planar chiral halogenated ferrocenes have come in useful as synthetic intermediates over the years, allowing for the preparation of functionalized derivatives for catalysis, material science, optoelectronics, and medicinal chemistry. Despite their chemical interest, few halogenated planar chiral ferrocenes have been prepared in enantiopure form by asymmetric synthesis so far. Enantioselective HPLC on polysaccharide-based chiral stationary phases (CSPs) has been used for resolving planar chiral ferrocenes making both enantiomers available. However, the enantioseparation of derivatives containing halogens or alkyl groups exclusively remains rather challenging. Given this context, in this study the enantioseparation of eleven dihalogenated planar chiral ferrocenes was systematically explored by using five polysaccharide-based CSPs under multimodal elution conditions. Baseline enantioseparations were achieved for nine analytes with separation factors (α) ranging from 1.15 to 1.66. Thermodynamic quantities associated with the enantioseparations were derived from van't Hoff plots, and for 1-halo-2-(iodoethynyl)ferrocenes (1-halogen = F, Cl, Br) halogen-dependent thermodynamic profiles were identified on a cellulose tris(3,5-dimethylphenylcarbamate)-based column. The impact of CSP structure and mobile phase (MP) polarity on the enantioseparation was evaluated. In addition, with the aim to unravel the functions of halogen substituents in mechanisms and noncovalent interactions underlying selector-selectand complex formation at molecular level, local electron charge density of specific molecular regions of the interacting partners were evaluated in terms of calculated electrostatic potential (V) and related source function (SF) contributions. On this basis, the impact of halogen type and position on the enantioseparation was investigated by correlating theoretical and experimental data.

  • DFT Exchange: Sharing Perspectives on the Workhorse of Quantum Chemistry and Materials Science

    Andrew Michael Teale, Trygve Helgaker, Andreas Savin, Carlo Adano, Bálint Aradi, Alexei Arbuznikov, Paul Ayers, Evert Jan Baerends, Vincenzo Barone, Patrizia Calaminici, Eric Cances, Emily Ann Carter, Pratim Chattaraj, Henry Chermette, Ilaria Ciofini, T. Daniel Crawford, Frank de Proft, John Dobson, Claudia Draxl, Thomas Frauenheim, Emmanuel Fromager, Patricio Fuentealba, Laura Gagliardi, Giulia Galli, Jiali Gao, Paul Geerlings, Nikitas Gidopoulos, Peter Gill, Paola Gori-Giorgi, Andreas Görling, Tim Gould, Stefan Grimme, Oleg Gritsenko, Hans Jørgen Aagaard Jensen, Erin Johnson, Robert Jones, Martin Kaupp, Andreas Koster, Leeor Kronik, Anna Krylov, Simen Kvaal, Andre Laestadius, Melvyn Levy, Mathieu Lewin, Sb Liu, Pierre-Francois Loos, Neepa Maitra, Frank Neese, John Perdew, Katarzyna Pernal, Pascal Pernot, P. Piecuch, Elisa Rebolini, Lucia Reining, Pina Romaniello, Adrienn Ruzsinszky, Dennis Salahub, Matthias Scheffler, Peter Schwerdtfeger, Viktor Staroverov, Jianwei Sun, Erik Tellgren, David Tozer, Samuel Trickey, Carsten Ullrich, Alberto Vela, Giovanni Vignale, Tomasz Adam Wesolowski, Xin Xu, Weitao Yang
    Physical Chemistry Chemical Physics, 2022, 24 (47), pp.28700-28781. ⟨10.1039/D2CP02827A⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    In this paper, the history, present status, and future of density-functional theory (DFT) is informally reviewed and discussed by 70 workers in the field, including molecular scientists, materials scientists, method...

  • Palladium-catalyzed Suzuki-Miyaura cross-coupling with α-aminophosphonates based on 1,3,4-oxadiazole as ligands

    Shaima Hkiri, Soufiane Touil, Ali Samarat, David Sémeril
    Comptes Rendus. Chimie, 2022, 25 (G1), pp.53-65. ⟨10.5802/crchim.144⟩ | Publiée le 1 janvier 2022
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    The synthesis of a palladium complex bearing two diethyl[(5-phenyl-1,3,4-oxadiazol-2ylamino)(4-nitrophenyl)methyl]phosphonates as ligands has demonstrated the ability of this type of α-aminophosphonates to coordinate to the palladium(II) ion via their electronically enriched nitrogen atom of the 1,3,4-oxadiazole ring. The complex was fully characterized by elemental analysis, infrared, NMR and mass spectrometry. A solid-state structure revealed the trans coordination of the two nitrogenated ligands. The presence of a hemilabile P(O)(OEt) 2 moiety in the α-aminophosphonates was exploited into palladiumcatalyzed Suzuki-Miyaura cross-coupling of aryl halides. The formation of (N,O)-chelate intermediates may increase the steric hindrance and the electronic density of the metal, which should favor the oxidative addition and the reductive elimination/product decoordination elementary steps. With our catalytic systems, good activities for the formation of ortho-di/trisubstituted biphenyls compounds were observed from aryl bromides using only 0.5 mol % of palladium. Cross-coupling of aryl chlorides required a catalyst loading of 1 mol % to generate ortho-substituted biphenyls.

  • Functionalized-1,3,4-oxadiazole ligands for the ruthenium-catalyzed Lemieux-Johnson type oxidation of olefins and alkynes in water

    Shaima Hkiri, Soufiane Touil, Ali Samarat, David Sémeril
    Molecular Catalysis, 2022, 517, pp.112014. ⟨10.1016/j.mcat.2021.112014⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    Three arene-ruthenium(II) complexes bearing alkyloxy(5-phenyl-1,3,4-oxadiazol-2ylamino)(4-trifluoromethylphenyl)methyl ligands were quantitatively obtained through the reaction of (E)-1-(4-trifluoromethylphenyl)-N-(5-phenyl-1,3,4-oxadiazol-2-yl)-methanimine with the ruthenium precursor [RuCl 2 (η 6-p-cymene)] 2 in a mixture of the corresponding alcohol and CH 2 Cl 2 at 50°C. The obtained complexes were fully characterized by elemental analysis, infrared, NMR and mass spectrometry. Solid-state structures confirmed the coordination of the 1,3,4-oxadiazole moiety to the ruthenium center via their electronically enriched nitrogen atom at position 3 in the aromatic ring. These complexes were evaluated as precatalysts in the Lemieux-Johnson type oxidative cleavage of olefins and alkynes in water at room temperature with NaIO 4 as oxidizing agent. Good to full conversions of olefins into the corresponding aldehydes were measured, but low catalytic activity was observed in the case of alkynes. In order to get more insight into the mechanism, three analogue areneruthenium complexes were synthesized and tested in the oxidative cleavage of styrene. The latter tests clearly demonstrated the importance of the hemilabile alkyloxy groups, which may form more stable (N,O)-chelate intermediates and increase the efficiency of the cis-dioxoruthenium(VI) catalyst.

  • Triton B-promoted regioselective intramolecular addition of enolates to tethered ynamides for the construction of 8-membered O-heterocycles

    Santanu Ghosh, Yongxiang Zheng, Daniele Maccarone, Feven-Alemu Korsaye, Ilaria Ciofini, Laurence Miesch
    Organic Chemistry Frontiers, 2022, 9 (15), pp.4057-4062. ⟨10.1039/D2QO00873D⟩ | Publiée le 1 janvier 2022
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    The synthesis of natural products containing eight-membered heterocycles has proved to be highly challenging. In this contribution, an environmentally benign synthesis of benzo-1,5 dioxocines via ynamides is reported. A new class of ynamides was prepared by using a green and mild synthetic pathway. The eight-membered heterocycles fused to aryl groups were obtained from propargylic ynamides by treatment with Triton B via addition of enolates to N-allenamide ethers. Deprotonation of the propargylic methylene group occurred before enolization of the methyl ketone because of the polarization of the triple bond by the amide moiety. Regioselective proximal O-alkylation on the N-allenamide provided shelf-stable eight-membered-heterocycles substituted by an amide in an economic fashion with no byproducts. This transformation is applicable to a wide range of ynamides, expanding significantly the chemical space of benzo-1,5 dioxocines crucial from a drug design perspective.

  • Synthesis of a helicene-fused porphyrin leading to a π-extended chiral chromophore

    Vincent Silber, Nathalie Gruber, Marion Jean, Nicolas Vanthuyne, Romain Ruppert
    Chemical Communications, 2022, 58, pp.6012 - 6015. ⟨10.1039/d2cc01475k⟩ | Publiée le 1 janvier 2022
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    The preparation of several covalently linked [6]-heliceneporphyrins is reported. A fused [6]-helicene-porphyrin p-extended aromatic system was isolated, the enantiomers separated and the chiroptical properties determined. The oxidative cyclodehydrogenation proved to be very effective for six-membered fused helical systems, but not suited for the formation of five-membered fused systems.

  • Effect of lipid saturation on the topology and oligomeric state of helical membrane polypeptides

    Evgeny Salnikov, Burkhard Bechinger
    Biochimica et Biophysica Acta:Biomembranes, 2022, 1864 (10), pp.184001. ⟨10.1016/j.bbamem.2022.184001⟩ | Publiée le 1 janvier 2022
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    Natural liquid crystalline membranes are made up of many different lipids carrying a mixture of saturated and unsaturated fatty acyl chains. Whereas in the past considerable attention has been paid to cholesterol content, the phospholipid head groups and the membrane surface charge the detailed fatty acyl composition was often considered less important. However, recent investigations indicate that the detailed fatty acyl chain composition has pronounced effects on the oligomerization of the transmembrane helical anchoring domains of the MHC II receptor or the membrane alignment of the cationic antimicrobial peptide PGLa. In contrast the antimicrobial peptides magainin 2 and alamethicin are less susceptible to lipid saturation. Using histidine-rich LAH4 designer peptides the high energetic contributions of lipid saturation in stabilizing transmembrane helical alignments are quantitatively evaluated. These observations can have important implications for the biological regulation of membrane proteins and should be taken into considerations during biophysical or structural experiments.

  • A cavity-shaped cis -chelating P,N ligand for highly selective nickel-catalysed ethylene dimerisation

    Yang Li, Katrin Pelzer, Damien Sechet, Geordie Creste, Dominique Matt, Pierre Braunstein, Dominique Armspach
    Dalton Transactions, 2022, 51 (30), pp.11226-11230. ⟨10.1039/d2dt01553f⟩ | Publiée le 1 janvier 2022
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    The presence of a permethylated α-cyclodextrin (α-CD) cavity in a chelating P,N ligand promotes exclusive formation of 1 : 1 ligand/metal complexes. In MX2 complexes, one of the two halido ligands is forced to reside inside the CD hollow while the second one is pointing outside. Unlike its cavity-free analogue, a Ni(II) complex of the CD ligand is a highly selective precatalyst for ethylene dimerisation (96% C4 selectivity with up to 95% of 1-butene within the C4 fraction)..

  • Arene Ru (II)‐catalyzed facile synthesis of N ‐acylhydrazones via acceptorless dehydrogenative coupling strategy

    Saranya Sundar, Ramesh Rengan, Anandaraj Pennamuthiriyan, David Sémeril
    Applied Organometallic Chemistry, 2022, 36 (10), pp.e6857. ⟨10.1002/aoc.6857⟩ | Publiée le 1 janvier 2022
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    A facile catalytic one-pot synthesis of N-acylhydrazones via acceptorless dehydrogenative coupling of readily available alcohols and benzohydrazides (R2CONHNH2) using arene ruthenium (II) complexes has been described. The coupling of alcohols with various benzohydrazides using ruthenium catalysts provide a wide range of N-acylhydrazones in good to excellent yields (63–93%; 32 examples). The present protocol offers high selectivity of hydrazones without any alkylated products and tolerates a range of functional groups. Control experiments indicate that the mechanism proceeds via acceptorless dehydrogenation of alcohols, and hydrogen and water are the sole by-products. The gram scale synthesis illustrates the usefulness of the present strategy.

  • Limonene and linalool hydroperoxides review: pros and cons for routine patch testing

    Isabel A Ogueta, Johanna Brared Christensson, Elena Giménez-Arnau, Richard Brans, Mark Wilkinson, Luca Stingeni, Caterina Foti, Olivier Aerts, Cecilia Svedman, Margarida Gonçalo, Ana Giménez-Arnau
    Contact Dermatitis, 2022, 87 (1), pp.1-12. ⟨10.1111/cod.14064⟩ | Publiée le 1 janvier 2022
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    Limonene and linalool are among the most common fragrance terpenes used in products of everyday life. They are pre-haptens forming hydroperoxides (Lim-OOHs, Lin-OOHs) upon oxidation inducing frequent positive patch test reactions in patients with dermatitis. Still, they are not yet routinely tested in Europe. This review evaluates the patch testing experience with Lim-OOHs and Lin-OOHs by answering key questions such as whether hydroperoxide patch testing is warranted, understand difficulties or challenges related to the reading and interpretation of hydroperoxide patch test results with currently available material, assessing their relevance. Studies are increasingly pointing out to high percentages of positive reactions in patients consecutively patch tested with these oxidized products. An association between a positive clinical history and a strong patch test reaction has been described, but problems with doubtful/irritant reactions have also been reported. Considering the high frequencies of relevant positive reactions, the incorporation of Lim-OOHs 0.3% and Lin-OOHs 1% in the baseline series could be discussed and is maybe justified. Since exposure, sensitization and elicitation limits of Lim-OOHs and Lin-OOHs in the products still need to be better determined, an assessment of previous exposure, possible sensitizations and reactions may help to improve the clinical assessment.

  • Synthesis and in situ behavior of 1,4-and 2,5-( 13 C) isotopomers of p-phenylenediamine in reconstructed human epidermis using high resolution magic angle spinning NMR

    Hassan Srour, Alexis Gosset, François-Marie Moussallieh, Karim Elbayed, Elena Giménez-Arnau, Jean-Pierre Lepoittevin
    Chemical Research in Toxicology, 2022, 35 (10), pp.1881-1892. ⟨10.1021/acs.chemrestox.2c00151⟩ | Publiée le 1 janvier 2022
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    p-Phenylenediamine (PPD) has been classified as a strong skin allergen, but when it comes to toxicological concerns, benzoquinone diamine (BQDI), the primary oxidation derivative of PPD, is frequently considered and was shown to covalently bind nucleophilic residues on model peptides. However, tests in solution are far from providing a reliable model, as the cutaneous metabolism of PPD is not covered. We now report the synthesis of two 13C substituted isotopomers of PPD, 1,4-(13C)p-phenylenediamine 1 and 2,5-(13C)p-phenylenediamine 2, and the investigation of their reactivity in reconstructed human epidermis (RHE) using the high resolution magic angle spinning (HRMAS) NMR technique. RHE samples were first treated with 1 or 2 and incubated for 1 to 48 h. Compared to the control, spectra clearly showed only the signals of 1 or 2 gradually decreasing with time to disappear after 48 h of incubation. However, the culture media of RHE incubated with 1 for 1 and 24 h, respectively, showed the presence of both monoacetylated- and diacetylated-PPD as major products. Therefore, the acetylation reaction catalyzed by N-acetyltransferase (NAT) enzymes appeared to be the main process taking place in RHE. With the aim of increasing the reactivity by oxidation, 1 and 2 were treated with 0.5 equiv of H2O2 prior to their application to RHE and incubated for different times. Under these conditions, new peaks having close chemical shifts to those of PPD-cysteine adducts previously observed in solution were detected. Under such oxidative conditions, we were thus able to detect and quantify cysteine adducts in RHE (maximum of 0.2 nmol/mg of RHE at 8 h of incubation) while no reaction with other nucleophilic amino acid residues could be observed.

  • Antibacterial Photodynamic Therapy in the Near-Infrared Region with a Targeting Antimicrobial Peptide Connected to a π-Extended Porphyrin

    Charly Gourlot, Alexis Gosset, Elise Glattard, Christopher Aisenbrey, Sabarinathan Rangasamy, Morgane Rabineau, Tan-Sothea Ouk, Vincent Sol, Philippe Lavalle, Christophe Gourlaouen, Barbara Ventura, Burkhard Bechinger, Valérie Heitz
    ACS Infectious Diseases, 2022, 8 (8), pp.1509-1520. ⟨10.1021/acsinfecdis.2c00131⟩ | Publiée le 1 janvier 2022
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    The increase of antimicrobial resistance to conventional antibiotics is worldwide a major health problem that requires the development of new bactericidal strategies. Antimicrobial photodynamic therapy (a-PDT) that generates reactive oxygen species acting on multiple cellular targets is unlikely to induce bacterial resistance. This localized treatment requires, for safe and efficient treatment of nonsuperficial infections, a targeting photosensitizer excited in the near IR. To this end, a new conjugate consisting of an antimicrobial peptide linked to a π-extended porphyrin photosensitizer was designed for a-PDT. Upon irradiation at 720 nm, the conjugate has shown at micromolar concentration strong bactericidal action on both Gram-positive and Gram-negative bacteria. Moreover, this conjugate allows one to reach a low minimum bactericidal concentration with near IR excitation without inducing toxicity to skin cells. Keywords: antimicrobial peptide; antimicrobial photodynamic therapy; bacteria; keratinocyte; near infrared; porphyrin.

  • Local Potential Functional Embedding Theory: A Self-Consistent Flavor of Density Functional Theory for Lattices without Density Functionals

    Sajanthan Sekaran, Matthieu Saubanère, Emmanuel Fromager
    Computation, 2022, 10 (3), pp.45. ⟨10.3390/computation10030045⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    Quantum embedding is a divide and conquer strategy that aims at solving the electronic Schrödinger equation of sizeable molecules or extended systems. We establish in the present work a clearer and in-principle-exact connection between density matrix embedding theory (DMET) and density-functional theory (DFT) within the simple but nontrivial one-dimensional Hubbard model. For that purpose, we use our recent reformulation of single-impurity DMET as a Householder transformed density-matrix functional embedding theory (Ht-DMFET). On the basis of well-identified density-functional approximations, a self-consistent local potential functional embedding theory (LPFET) is formulated and implemented. Combining both LPFET and DMET numerical results with our formally exact density-functional embedding theory reveals that a single statically embedded impurity can in principle describe the density-driven Mott–Hubbard transition, provided that a complementary density-functional correlation potential (which is neglected in both DMET and LPFET) exhibits a derivative discontinuity (DD) at half filling. The extension of LPFET to multiple impurities (which would enable to circumvent the modeling of DDs) and its generalization to quantum chemical Hamiltonians are left for future work.

  • The Reductive Dehydroxylation Catalyzed by IspH, a Source of Inspiration for the Development of Novel Anti-Infectives

    Hannah Jobelius, Gabriella Bianchino, Franck Borel, Philippe Chaignon, Myriam Seemann
    Molecules, 2022, 27 (3), pp.708. ⟨10.3390/molecules27030708⟩ | Publiée le 1 janvier 2022
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    The non-mevalonate or also called MEP pathway is an essential route for the biosynthesis of isoprenoid precursors in most bacteria and in microorganisms belonging to the Apicomplexa phylum, such as the parasite responsible for malaria. The absence of this pathway in mammalians makes it an interesting target for the discovery of novel anti-infectives. As last enzyme of this pathway, IspH is an oxygen sensitive [4Fe-4S] metalloenzyme that catalyzes 2H+/2e- reductions and a water elimination by involving non-conventional bioinorganic and bioorganometallic intermediates. After a detailed description of the discovery of the [4Fe-4S] cluster of IspH, this review focuses on the IspH mechanism discussing the results that have been obtained in the last decades using an approach combining chemistry, enzymology, crystallography, spectroscopies, and docking calculations. Considering the interesting druggability of this enzyme, a section about the inhibitors of IspH discovered up to now is reported as well. The presented results constitute a useful and rational help to inaugurate the design and development of new potential chemotherapeutics against pathogenic organisms.

  • Chalcogen Bonds: How to Characterize Them in Solution ?

    Patrick Pale, Victor Mamane
    ChemPhysChem, 2022, 24 (4), ⟨10.1002/cphc.202200481⟩ | Publiée le 1 janvier 2022
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    Chalcogen bond (ChB) occurs between molecules containing Lewis acidic chalogen substituents and Lewis bases. Recently, ChB emerged as a pivotal interaction in solution-based applications such as anion recognition, anion transport and catalysis. However, before moving to applications, the involvement of ChB must be established in solution. In this Concept article, we provide a brief review of the currently available experimental investigations of ChB in solution.

  • Molecular evidence for improved tribological performances of MoDTC induced by methylene-bis(dithiocarbamates) in engine lubricants

    Yu Min Kiw, Pierre Adam, Philippe Schaeffer, Benoît Thiébaut, Chantal Boyer, Nicolas Obrecht
    RSC Advances, 2022, 12 (36), pp.23083 - 23090. ⟨10.1039/d2ra03036e⟩ | Publiée le 1 janvier 2022
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    During engine tests, it has been observed that the combined use of molybdenum dithiocarbamates (MoDTC) and methylene-bis(dithiocarbamates) (MBDTC) in formulated engine oils resulted in better fuel efficiency, keeping the friction coefficient stable at low values for a longer period of time as compared to the same oil devoid of MBDTC. Therefore, the interactions between MBDTC and MoDTC have been investigated at the molecular level. The qualitative and quantitative evolution of MoDTC in two engine oils similarly formulated, but with and without MBDTC, were compared during engine tests using a specifically developed high performance liquid chromatography-mass spectrometry (HPLC-MS) analytical method. Parallel to the molecular study, the evolution of the friction coefficients of both lubricants as well as the evolution of the fuel consumption of the engine were determined. The combined use of MoDTC and MBDTC was shown to exhibit better fuel efficiency and to maintain a relatively low friction coefficient for longer periods of time as compared to the oil devoid of MBDTC. It could be determined that the enhanced performances observed were presumably related to an extension of the lifetime of MoDTC in the engine oil containing MBDTC. Since the MoDTC remaining at the end of the engine test in oil containing MBDTC exclusively bear ligands corresponding to the dithiocarbamate moieties of MBDTC, it can be concluded that the prolonged existence of MoDTC was due to the progressive replacement of the degraded dithiocarbamate ligands on MoDTC educts by those released from MBDTC during engine functioning. As a result, the concentrations of MoDTC could be maintained at a useful level for a longer period in the engine oil containing MBDTC, leading to better fuel consumption performances.

  • Modulation of the structural information in shape-defined heterocyclic strands: the case of a (pyridine-hydrazone) 2 pyrazine ligand

    Muthu Kumar Thangavel, Jack Harrowfield, Corinne Bailly, Lydia Karmazin, Adrian-Mihail Stadler
    Dalton Transactions, 2022, 51 (37), pp.14107-14117. ⟨10.1039/D2DT01684B⟩ | Publiée le 1 janvier 2022
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    Metal ions (Ag+, Cd2+, Eu3+, Sm3+) and protons can, through coordination and protonation, modulate in three specific ways the structural information contained in the pyrazine-based heterocyclic strand L (obtained from 2,5-bis(methylhydrazino)pyrazine and 2 equivalents of 2-pyridinecarboxaldehyde), thus generating two linear rod-like conformations and a bent one. This conformational diversity is associated with a structural one that consists of two diprotonated forms (H2L(PF6)2 and H2L(CF3SO3)2), a polymeric architecture [AgL]n(CF3SO3)n, two rack-like complexes ([Eu2H2L3(CF3SO3)6](PF6)2 and [Sm2H2L3(CF3SO3)6](PF6)2) and a grid-like structure ([Cd4L4](CF3SO3)8).

  • Ferrocene derivatives with planar chirality and their enantioseparation by liquid‐phase techniques

    Paola Peluso, Victor Mamane
    Electrophoresis, In press, ⟨10.1002/elps.202200148⟩ | Publiée le 1 janvier 2022
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    In the last decade, planar chiral ferrocenes have attracted a growing interest in several fields, particularly in asymmetric catalysis, medicinal chemistry, chiroptical spectroscopy and electrochemistry. In this frame, the access to pure or enriched enantiomers of planar chiral ferrocenes has become essential, relying on the availability of efficient asymmetric synthesis procedures and enantioseparation methods. Despite this, in enantioseparation science, these metallocenes were not comprehensively explored, and very few systematic analytical studies were reported in this field so far. On the other hand, enantioselective highperformance liquid chromatography has been frequently used by organic and organometallic chemists in order to measure the enantiomeric purity of planar chiral ferrocenes prepared by asymmetric synthesis. On these bases, this review aims to provide the reader with a comprehensive overview on the enantioseparation of planar chiral ferrocenes by discussing liquid-phase enantioseparation methods developed over time, integrating this main topic with the most relevant aspects of ferrocene chemistry. Thus, the main structural features of ferrocenes and the methods to model this class of metallocenes will be briefly summarized. In addition, planar chiral ferrocenes of applicative interest as well as the limits of asymmetric synthesis for the preparation of some classes of planar chiral ferrocenes will also be discussed with the aim to orient analytical scientists towards 'hot topics' and issues which are still open for accessing enantiomers of ferrocenes featured by planar chirality.

  • Alkynylgold(I) C 3 -Chiral Concave Complexes: Aggregation and Luminescence

    Jing Zhang, Astrid Schaly, Jean-Claude Chambron, Bruno Vincent, Nathalie Zorn, Emmanuelle Leize-Wagner, Marion Jean, Nicolas Vanthuyne
    Chemistry - A European Journal, 2022, ⟨10.1002/chem.202103759⟩ | Publiée le 1 janvier 2022
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    Chiral gold(I) acetylide trinuclear complexes 1 - 3 based on the cyclotribenzylene platform and terminal PR3 ligands (R = Ph, Et, and Cy, respectively), were characterized and their light emission studied. They exhibited long-lived blue phosphorescence in CHCl3 and a weak fluorescence in the UV. In MeOH/CHCl3 mixtures of > 1:1 volume ratio, 1 and 2 exhibited a new emission band at ca 540 nm that developed at the expense of the UV emission. DLS studies demonstrated the presence of molecular aggregates of Ø 30 - 80 nm. The green emission observed in MeOH-rich solvent mixtures was therefore induced by aggregation, and could originate from Au•••Au interactions. The AIE spectrum of 3 was observed only in solutions containing 99% of MeOH, and correlated with its solid state emission. The AIE profiles of the enantiomers of 1 differed from that of rac-1, suggesting that the latter is a true racemate.

  • Where the heart beats

    Burkhard Bechinger
    Structure, 2022, 30 (3), pp.326-328. ⟨10.1016/j.str.2022.02.006⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    In this issue of Structure, Reddy et al. present details about the structure, topology, and dynamics of the small membrane protein DWORF, a regulin that activates the Ca2+ pump SERCA. State-of-the art oriented solid-state NMR spectroscopy in combination with molecular dynamics simulations reveal the structure of this cardiac muscle protein

  • Chiral Ferrocenyl−Iodotriazoles and −Iodotriazoliums as Halogen Bond Donors. Synthesis, Solid State Analysis and Catalytic Properties.

    Emmanuel Aubert, Abdelatif Doudouh, Emmanuel Wenger, Barbara Sechi, Paola Peluso, Patrick Pale, Victor Mamane
    European Journal of Inorganic Chemistry, In press, 2022 (5), pp.e202100927. ⟨10.1002/ejic.202100927⟩ | Publiée le 1 janvier 2022
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    Despite the increasing number of applications based on halogen bond (XB), asymmetric catalysis purely based on such supramolecular interactions still remains a huge challenge. The first step toward its development is the design of appropriate XB chiral donor molecules with good catalytic properties. In this context, we report the synthesis of a series of iodinated compounds based on the triazole or triazolium ring and possessing the planar chirality of ferrocene. Their XB donor property was attested by X-ray diffraction analysis, showing short I•••N and I•••F interactions in the triazole-based derivatives and in the tetrafluoroborate salt of a idodotriazolium, respectively. The potential of these compounds to act as XB-based catalysts was demonstrated in the aza-Diels-Alder reaction involving an imine and a diene. Whereas triazole-based derivatives were inactive in this reaction, the triflate salts of iodotriazoliums delivered the expected cycloadduct with high yield.

  • Copper‐Catalyzed Synthesis of Terminal vs. Fluorine‐Substituted N ‐Allenamides via Addition of Diazo Compounds to Terminal Ynamides

    Yongxiang Zheng, Baptiste Moegle, Santanu Ghosh, Anna Perfetto, Davide Luise, Ilaria Ciofini, Laurence Miesch
    Chemistry - A European Journal, 2022, 28 (1), pp.e202103598. ⟨10.1002/chem.202103598⟩ | Publiée le 1 janvier 2022
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    A copper-mediated coupling reaction between ynamides and diazo-compounds to produce N-allenamides is reported for the first time. This method enables facile and rapid access to terminal Nallenamides by using commercially available TMS-diazomethane with wide functional group compatibility on the nitrogen. Furthermore, the ubiquity of molecules containing a fluorine moiety in medicine, in agricultural, and material science requires the continuous search of new building blocks, including this unique surrogate. The CuI/diazo protocol was successfully applied to the synthesis of fluorinesubstituted N-allenamides. DFT calculations provided insights in the mechanism involved.

  • Electron paramagnetic resonance and spin trapping to detect free radicals from allergenic hydroperoxides in contact with the skin: from the molecule to the tissue

    Bertrand Vileno, Yannick Port-Lougarre, Elena Giménez-Arnau
    Contact Dermatitis, 2022, 86 (4), pp.241-253. ⟨10.1111/cod.14037⟩ | Publiée le 1 janvier 2022
    Article dans une revue

    A major research topic consists of revealing the contribution of radical-mediated reactions in dermatological diseases related to xenobiotic-induced stress, to succeed risk assessment procedures protecting producers and consumers. Allergic contact dermatitis is the clinically relevant consequence of skin sensitization, one of the most critical occupational and environmental health issues related to xenobiotics exposure. The first key event identified for the skin sensitization process to a chemical is its aptitude to react with epidermal proteins and form antigenic structures that will further trigger the immune response. Many chemical sensitizers are suspected to react through mechanisms involving radical intermediates. This review focuses on recent progress we have accomplished over the last few years studying radical intermediates derived from skin sensitizing chemicals by electron paramagnetic resonance in combination with the spin trapping technique. Our work is carried out “from the molecule”, performing studies in solution, “to the tissue”, by the development of a methodology on a reconstructed human epidermis model, very close in terms of histology and metabolic/enzymatic activity to real human epidermis, that can be used as suitable biological tissue model. The benefits are to test chemicals under conditions close to human use and real-life sensitization exposures and benefit from the 3D microenvironment.

  • Ionothermal synthesis of calcium-based metal–organic frameworks in a deep eutectic solvent

    Michaël Teixeira, Renata A. Maia, Lydia Karmazin, Benoît Louis, Stéphane Baudron
    CrystEngComm, 2022, 24 (3), pp.601-608. ⟨10.1039/D1CE01497H⟩ | Publiée le 1 janvier 2022
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    The unprecedented use of a deep eutectic solvent (DES) for the ionothermal synthesis of Ca(II) based metal–organic frameworks (MOFs) has been explored. The 1 : 2 choline chloride : e-urea DES (e-urea = 2-imidazolidinone, ethylene urea) has been successfully employed for the preparation of Ca-MOFs with a series of dicarboxylic acid ligands. These materials have been structurally characterized by single-crystal and powder X-ray diffraction techniques as well as by thermo-gravimetric analysis and infrared, UV-visible and emission spectroscopy techniques in the crystalline state. The MOFs obtained have been found to be three-dimensional with the presence of channels occupied by coordinated e-urea solvent molecules. While the latter solvent acts as a bridging ligand in the case of terephthalate and isophthalate based MOFs, it behaves as a terminal ligand in the MOFs isolated with 2,5-dihydroxyterephthalate (dobdcH22−). With this ligand, two phases differing in the coordination mode of the dobdcH22− anion have been obtained. Interestingly, for one of them formulated as [Ca(dobdcH2)(e-urea)2], the crystals rapidly lost their transparency and luster upon exposure to air. This phenomenon could be rationalized by X-ray diffraction to result from the uptake of water molecules from the ambient atmosphere leading to the replacement of one e-urea molecule by H2O in the Ca(II) cation coordination sphere. These results demonstrate that the 1 : 2 choline chloride : e-urea DES can be considered as an effective solvent for the synthesis of water-sensitive Ca-MOFs.

  • Cooperative Redox Transitions Drive Electrocatalysis of the Oxygen Evolution Reaction on Cobalt–Iron Core–Shell Nanoparticles

    Lisa Royer, Antoine Bonnefont, Tristan Asset, Benjamin Rotonnelli, Juan-Jesús Velasco-Vélez, Steven Holdcroft, Simon Hettler, Raul Arenal, Benoit Pichon, Elena Savinova
    ACS Catalysis, 2022, 13 (1), pp.280-286. ⟨10.1021/acscatal.2c04512⟩ | Publiée le 1 janvier 2022
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    Transition metal oxides are promising materials for the development of cost-effective catalysts for the oxygen evolution reaction (OER) in alkaline media. Understanding the catalysts’ transformations occurring during the harsh oxidative conditions of the OER remains a bottleneck for the development of stable and active catalysts. Here, we studied redox transformations of core–shell Fe3O4@CoFe2O4 oxide nanoparticles over a wide range of potentials by using operando near-edge X-ray absorption fine structure (NEXAFS) spectroscopy in total electron yield (TEY) detection mode. The analysis of the NEXAFS spectra reveals that the Fe3O4 core strongly affects the surface chemistry of the CoFe2O4 shell under the OER conditions. The spinel structure of the particles with Co (II) in the shell is preserved at potentials as high as 1.8 V vs RHE, at which Co (II) is expected to be oxidized into Co (III); whereas Fe (II) in the core is reversibly oxidized to Fe (III).

  • Synthesis and Characterization of Bisthienylethene‐Porphyrin Photoswitchable Copolymers

    Zhaohui Huo, Vasilica-Adriana Badets, Helen Ibrahim, Michel Goldmann, Hualong Xu, Tao Yi, Corinne Boudon, Laurent Ruhlmann
    European Journal of Organic Chemistry, 2021, 2021 (48), pp.6636-6645. ⟨10.1002/ejoc.202100918⟩ | Publiée le 28 décembre 2021
    Article dans une revue

    The bisthienylethene (BTE) class is one of the most intensely studied type of photochromatic dye which attract great attention from researchers seeking to exploit light responsive switches in an extensive diversity of fields. BTE is the subject of many avenues of research. We report here the synthesis of a new diarylethene-porphyrin photoswitchable copolymer via the electropolymerization of zinc octaethyl porphyrin and pyridine substituted diarylethene. The electropolymerization was monitored by electrochemical quartz crystal microbalance (EQCM). The copolymer was characterized by electrochemistry, UV-Vis spectroscopy, X-ray photoelectron spectroscopy (XPS), and atomic force microscopy (AFM). The incorporated diarylethene maintains its reversible photochromism upon the UV-Vis radiation with multiple cycles of ring-opening and closing. Attention is focused on the ways the polymer environment affects BTE photochromism.

  • trans-Dichlorobis(XPhos)palladium(II) Precatalyst for Suzuki–Miyaura Cross-Coupling Reactions of Aryl/Vinyl Sulfonates/Halides: Scope, Mechanistic Study, and Synthetic Applications

    Fatih Sirindil, Romain Pertschi, Emma Naulin, Delphine Hatey, Jean-Marc Weibel, Patrick Pale, Aurélien Blanc
    ACS Omega, 2021, 7 (1), pp.1186 - 1196. ⟨10.1021/acsomega.1c05770⟩ | Publiée le 23 décembre 2021
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    Suzuki−Miyaura cross-coupling reactions of aryl/vinyl sulfonates/halides with various boron species were performed using an easily available trans-dichlorobis(XPhos)palladium(II) precatalyst. Under microwave assistance, more than 30 coupling products were obtained with yields ranging from 23 to 99%, including the synthesis of two bioactive compounds, dubamine and tamoxifen. A mechanistic investigation of the Suzuki−Miyaura reaction was conducted notably by nuclear magnetic resonance (NMR) and high-resolution mass spectroscopy, revealing the nature of the active Pd 0 species and of the reducing entity.

  • How the Presence of Hemin Affects the Expression of the Different Iron Uptake Pathways in Pseudomonas aeruginosa Cells

    Vincent Normant, Lauriane Kuhn, Mathilde Munier, Philippe Hammann, Gaëtan Mislin, Isabelle Schalk
    ACS Infectious Diseases, 2021, 8 (1), pp.183-196. ⟨10.1021/acsinfecdis.1c00525⟩ | Publiée le 8 décembre 2021
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    Iron is an essential nutriment for almost all organisms, but this metal is poorly bioavailable. During infection, bacteria access iron from the host by importing either iron or heme. Pseudomonas aeruginosa, a gram-negative pathogen, secretes two siderophores, pyoverdine (PVD) and pyochelin (PCH), to access iron and is also able to use many siderophores produced by other microorganisms (called xenosiderophores). To access heme, P. aeruginosa uses three distinct uptake pathways, named Has, Phu, and Hxu. We previously showed that P. aeruginosa expresses the Has and Phu heme uptake systems and the PVD- and PCH-dependent iron uptake pathways in iron-restricted growth conditions, using proteomic and RT-qPCR approaches. Here, using the same approaches, we show that physiological concentrations of hemin in the bacterial growth medium result in the repression of the expression of the proteins of the PVD- and PCH-dependent iron uptake pathways, leading to less production of these two siderophores. This indicates that the pathogen adapts its phenotype to use hemin as an iron source rather than produce PVD and PCH to access iron. Moreover, the presence of both hemin and a xenosiderophore resulted in (i) the strong induction of the expression of the proteins of the added xenosiderophore uptake pathway, (ii) repression of the PVD- and PCH-dependent iron uptake pathways, and (iii) no effect on the expression levels of the Has, Phu, or Hxu systems, indicating that bacteria use both xenosiderophores and heme to access iron.

  • MIL‐96‐Al for Li–S Batteries: Shape or Size?

    Pengbiao Geng, Lei Wang, Meng Du, Yang Bai, Wenting Li, Yanfang Liu, Shuangqiang Chen, Pierre Braunstein, Qiang Xu, Huan Pang
    Advanced Materials, 2021, pp.2107836. ⟨10.1002/adma.202107836⟩ | Publiée le 8 décembre 2021
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    Metal–organic frameworks (MOFs) with controllable shapes and sizes show a great potential in Li–S batteries. However, neither the relationship between shape and specific capacity nor the influence of MOF particle size on cyclic stability have been fully established yet. Herein, MIL-96-Al with various shapes, forming hexagonal platelet crystals (HPC), hexagonal bipyramidal crystals (HBC), and hexagonal prismatic bipyramidal crystals (HPBC) are successfully prepared via cosolvent methods. Density functional theory (DFT) calculations demonstrate that the HBC shape with highly exposed (101) planes can effectively adsorb lithium polysulfides (LPS) during the charge/discharge process. By changing the relative proportion of the cosolvents, HBC samples with different particle sizes are prepared. When these MIL-96-Al crystals are used as sulfur host materials, it is found that those with a smaller size of the HBC shape deliver higher initial capacity. These investigations establish that different crystal planes have different adsorption abilities for LPS, and that the MOF particle size should be considered for a suitable sulfur host. More broadly, this work provides a strategy for designing sulfur hosts in Li–S batteries.

  • A hybrid bioinspired catechol-alloxazine triangular nickel complex stabilizing protons and electrons

    Agnideep Das, Hannah Jobelius, Jules Schleinitz, Stefani Gamboa-Ramirez, Geordie Creste, Gwendal Kervern, Jesus Raya, Nolwenn Le Breton, Aurélie Guénet, Zahia Boubegtiten-Fezoua, Laurence Grimaud, Maylis Orio, Guillaume Rogez, Petra Hellwig, Sylvie Choua, Sylvie Ferlay, Marine Desage-El Murr
    Inorganic Chemistry Frontiers, 2021, 8 (24), pp.5286-5298. ⟨10.1039/D1QI01131F⟩ | Publiée le 7 décembre 2021
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    We report the design of a unique bioinspired ligand merging redox-active catechol and flavin-related alloxazine substructures. Upon coordination with a Ni(II) salt, this hybrid ligand forms a trinuclear complex containing three Ni II centers and three redox-active ligands. This air-stable metallic triangle stabilizing protons and electrons was studied by X-ray crystallography, infra-red (IR) and UV-vis spectroscopy, SQUID magnetometry (Superconducting QUantum Interference Device), MAS-NMR (Magic Angle Spinning-Nuclear Magnetic Resonance), EPR (Electron Paramagnetic Resonance), electrochemistry and DFT (Density Functional Theory). This multidisciplinary approach supports the presence of protons located on the organic ligands, and an electronic structure involving three high spin Ni(II) ions strongly ferromagnetically coupled with radicals. Both ligand and complex provide a new design for molecular bricks and bioinspired energy storage devices.

  • Rational Design and General Synthesis of Multimetallic Metal–Organic Framework Nano‐Octahedra for Enhanced Li–S Battery

    Wenting Li, Xiaotian Guo, Pengbiao Geng, Meng Du, Qingling Jing, Xudong Chen, Guangxun Zhang, Hongpeng Li, Qiang Xu, Pierre Braunstein, Huan Pang
    Advanced Materials, 2021, 33 (45), pp.2105163. ⟨10.1002/adma.202105163⟩ | Publiée le 23 novembre 2021
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    Metal–organic frameworks (MOFs), which consist of central metal nodes and organic linkers, constitute a fast growing class of crystalline porous materials with excellent application potential. Herein, a series of Mn-based multimetallic MOF (bimetallic and trimetallic MIL-100) nano-octahedra are prepared by a facile one-pot synthetic strategy. The types and proportions of the incorporated elements can be tuned while retaining the original topological structure. The introduction of other metal ions is verified at the atomic level by combining X-ray absorption fine structure experiments and theoretical calculations. Furthermore, these multimetallic Mn-based MIL-100 nano-octahedra are utilized as sulfur hosts to prepare cathodes for Li–S batteries. The MnNi-MIL-100@S cathode exhibits the best Li–S battery performance among all reported MIL-100@S composite cathode materials, with a reversible capacity of ≈708.8 mAh g−1 after 200 cycles. The synthetic strategy described herein is utilized to incorporate metal ions into the MOF architecture, of which the parent monometallic MOF nano-octahedra cannot be prepared directly, thus rationally generating novel multimetallic MOFs. Importantly, the strategy also allows for the general synthesis and study of various micro-/nanoscale MOFs in the energy storage field.

  • Porphyrins and Polyoxometalate Scaffolds

    Raphaël Lamare, Romain Ruppert, Corinne Boudon, Laurent Ruhlmann, Jean Weiss
    Chemistry - A European Journal, 2021, 27 (65), pp.16071-16081. ⟨10.1002/chem.202102277⟩ | Publiée le 22 novembre 2021
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    Polyoxometalates (POMs) can act as unique reservoirs for multiple electron transfers. As POMs display only weak absorption in the visible spectrum, they can be associated with chromophores such as porphyrins and porphyrin antennae. In this Minireview, the research dedicated to the combination of porphyrins and polyoxometalates is put in context and the state of the art identifying the challenges addressed in the optimization of hybrid materials for applications is detailed.

  • Great enhancement of mechanical features in PLA based composites containing aligned few layer graphene ( FLG ), the effect of FLG loading, size, and dispersion on mechanical and thermal properties

    Hamza El Marouazi, Benoit Schueren, Damien Favier, Anaëlle Bolley, Samuel Dagorne, Thierry Dintzer, Izabela Janowska
    Journal of Applied Polymer Science, 2021, 138 (44), pp.51300. ⟨10.1002/app.51300⟩ | Publiée le 20 novembre 2021
    Article dans une revue

    Four series of PLA based composite films containing horizontally aligned few layer graphene (FLG) flakes of high aspect ratio and adsorbed albumin are prepared. The mechanical and thermal properties varies with percentage, dispersion degree and size of FLG flakes. Great improvement up to 290 and 360% of tensile modulus and strength respectively were obtained for the composite containing high lateral size of FLG at 0.17% wt., and up to 60 and 80% for the composite with very well dispersed 0.02% wt. FLG. The composites of PLA and PEG-PLLA containing very well dispersed FLG flakes at 0.07 % wt. are ductile showing enhancement of elongation at break up to respectively 80 and 88%. Relatively high electrical conductivity, 5 x 10-3 S/cm, is measured for PLA film charged with 3% of FLG.

  • Ni II 36 ‐Containing 54‐Tungsto‐6‐Silicate: Synthesis, Structure, Magnetic and Electrochemical Studies

    Joydeb Goura, Bassem S. Bassil, Xiang Ma, Ananthu Rajan, Eufemio Moreno‐pineda, Jürgen Schnack, Masooma Ibrahim, Annie K. Powell, Mario Ruben, Jingjing Wang, Laurent Ruhlmann, Ulrich Kortz
    Chemistry - A European Journal, 2021, 27 (61), pp.15081-15085. ⟨10.1002/chem.202102973⟩ | Publiée le 2 novembre 2021
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    The 36-NiII-containing 54-tungsto-6-silicate, [Ni36(OH)18(H2O)36(SiW9O34)6]6- (Ni36) was synthesized by a simple one-pot reaction of the Ni2-pivalate complex [Ni2(μ-OH2)(O2CCMe3)4(HO2CCMe3)4] with the trilacunary [SiW9O34]10- polyanion precursor in water and structurally characterized by a multitude of physicochemical techniques including single-crystal XRD, FT-IR, TGA, elemental analysis, magnetic and electrochemical studies. Polyanion Ni36 comprises six equivalent {NiII6SiW9} units which are linked by Ni-O-W’ bridges forming a macrocyclic assembly. Magnetic studies demonstrated that the {Ni6} building blocks in Ni36 remain magnetically intact while forming a hexagonal ring with antiferromagnetic exchange interactions between adjacent {Ni6} units. Electrochemical studies indicated that the first reduction is reversible and associated with the WVI/V couple, whereas the second reduction is irreversible and associated to the couple NiII/0.

  • Epimers l- and d-Phenylseptin: How the relative stereochemistry affects the peptide-membrane interactions

    Victor H O Munhoz, Carolina S Ferreira, Lucio O Nunes, Talita L Santos, Christopher Aisenbrey, Regina Adão, Antônio Flávio de Carvalho Alcântara, Mariana T.Q. de Magalhães, Dorila Piló-Veloso, Jarbas M Resende, Burkhard Bechinger, Rodrigo M Verly
    Biochimica et Biophysica Acta:Biomembranes, 2021, 1863 (11), pp.183708. ⟨10.1016/j.bbamem.2021.183708⟩ | Publiée le 1 novembre 2021
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    Conformational analysis of peptides Biophysical prediction of peptide-membrane interactions Antimicrobial mechanism of action Membrane active peptides L and D peptide epimers ABSTRACT In recent decades, several epimers of peptides containing d-amino acids have been identified in antimicrobial sequences, a feature which has been associated with post-translational modification. Generally, d-isomers present similar or inferior antimicrobial activity, only surpassing their epimers in resistance to peptidases. The naturally occurring l-Phenylseptin (l-Phes) and d-Phenylseptin (d-Phes) peptides (FFFDTLKNLAGKVIGALT-nh 2) were reported with d-epimer showing higher activity against Staphylococcus aureus and Xanthomonas axonopodis in comparison with the l-epimer. In this study, we combine structural (CD, solution NMR), orientational (solid-state NMR) and biophysical (ITC, DSC and DLS) studies to understand the role of the d-phenylalanine in the increase of the antimicrobial activity. Although both peptides are structurally similar in the helical region ranging from D4 to the C-terminus, significant structural differences were observed near the peptides' N-termini (which encompasses the FFF motif). Specific aromatic interactions involving the phenylalanine side chains of d-Phes is responsible to maintaining the F1-F3 residues on the hydrophobic face of the peptide, increasing its amphipathicity when compared to the l-epimer. The higher capability of d-Phes to exert an efficient anchoring in the hydrophobic core of the phospholipid bilayer indicates a pivotal role of the N-terminus in enhancing the interaction between the d-peptide and the membrane interface in relation to its epimer.

  • Room-temperature spin nutations in a magnetically condensed phase of [Y(pc)2]•

    Athanassios K Boudalis, Jorge Enrique Olivares Peña, Eufemio Moreno Pineda, Artem Fediai, Wolfgang Wenzel, Philippe Turek, Mario Ruben
    Chemical Communications, 2021, ⟨10.1039/D1CC05491K⟩ | Publiée le 11 octobre 2021
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    FID-detected nutations of the antiferromagnetic crystal form of [Y(pc)2]• demonstrated that its radical spin can be coherently driven in the its magnetically condensed undeuterated phase and at room temperature. Liquid-helium...

  • Iridium(III) Catalyzed Z-Selective Allylic Arylation of α-Fluoro But-1-enoic Acid Amides via β-F-Elimination in Water

    Clément Casalta, Christophe Gourlaouen, Samir Bouzbouz
    Organic Letters, 2021, ⟨10.1021/acs.orglett.1c02054⟩ | Publiée le 7 octobre 2021
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    Allylic arylation of -fluoro but-1-enoic acid amides with arylboronic acids was carried out in water by comparing the cata-lytic activity of iridium(III) and rhodium (III). Ir(III) has shown a strong superiority over Rh(III) to give allyl-aryl coupling products with excellent stereoselectivity in favor of the Z isomer. The origin of high stereoselectivity is perhaps because of the a coordination of iridium Ir-N or Ir-O.

  • Cavity-shaped ligands for asymmetric metal catalysis

    Zeyneb Kaya, Embarek Bentouhami, Katrin Pelzer, Dominique Armspach
    Coordination Chemistry Reviews, 2021, 445, pp.214066. ⟨10.1016/j.ccr.2021.214066⟩ | Publiée le 1 octobre 2021
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    Cavity-shaped ligands offer unique opportunities for influencing the first sphere of coordination of metals because of their capacity to act as containers for metal centers and/or preorganization platforms. These unique properties are of particular importance in asymmetric metal catalysis where spatial control around the coordinated substrate is of paramount importance for reaching high ee values. This perspective article describes the different approaches, whether covalent or supramolecular, that have so far been used for achieving enantiodiscrimination in asymmetric metal-catalyzed reactions thanks to metal complexation within or near chiral capsular environments.

  • Imidazolium salts and [Pt(cod) 2 ]: from NHC hydrido complexes to the unprecedented olefinic tetrahedral cluster [Pt 4 (μ-H)(cod) 4 ]BF 4

    Fengkai He, Christophe Gourlaouen, Huan Pang, Pierre Braunstein
    Chemical Communications, 2021, 57 (78), pp.10039-10042. ⟨10.1039/D1CC03673D⟩ | Publiée le 30 septembre 2021
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    Whereas the bis(imine)imidazolium salt 1·Cl is a potential precursor to a NimineCNHCNimine pincer-type ligand, it reacted with [Pt(cod)2] to give the PtII NHC hydrido complex 3, in which chloride coordination and CNHCNimine chelation is preferred over pincer formation. Unexpectedly, reaction of 1·BF4 with [Pt(cod)2] afforded the unprecedented, 56 CVE tetrahedral cluster [Pt4(μ-H)(cod)4]BF4 (7), which was fully characterized. Imidazolium salts are ubiquitous sources of the much studied NHC ligands and not expected to lead to the formation of metal clusters.

  • Computational Study of Benzosultam Formation through Gold(I)‐Catalyzed Ammoniumation/Nucleophilic Substitution Reaction

    Romain Pertschi, Adiran Aguirre, Patrick Pale, Aurélien Blanc, Amalia I Poblador Bahamonde
    Helvetica Chimica Acta, 2021, ⟨10.1002/hlca.202100133⟩ | Publiée le 29 septembre 2021
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    The Au(I)-catalyzed reactions of (2-alkynyl)phenylsulfonyl azetidines bearing terminal and non-terminal alkynes in the presence of methanol as protic nucleophile to form benzosultams derivatives were studied by density functional theory (DFT) calculations. Our study highlights that gold(I) catalyzed nucleophilic addition of the nitrogen on the alkyne is favored over the direct ring opening of the azetidine by methanol, confirming the ammonium-based mechanism. In addition, the reverse regioselectivity observed experimentally where nonterminal alkynes favors the formation of 6-endo-dig-benzosultams while terminal alkynes favor 5-exo-dig products is also explored through two different scenarios. The first one embraces the classical activation of the alkyne by a single Au(I) species while the second one tackles the formation of a σ,π-digold acetylide complex. Calculations identify both pathways as competitive although only mono Au(I) complexes can lead to final products, in good agreement with experimental observation. Further details on the importance of the presence of an excess of the protic nucleophile on the protodemetallation step and the final aminal formation is also discussed.

  • Broadband Electron Paramagnetic Resonance of a molecular spin triangle

    Jérôme Robert, Philippe Turek, Matthieu Bailleul, Athanassios K Boudalis
    Physical Chemistry Chemical Physics, 2021, 23 (36), pp.20268-20274. ⟨10.1039/D1CP03295J⟩ | Publiée le 22 septembre 2021
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    We built a broadband Electron Paramagnetic Resonance (EPR) spectrometer capable of fieldand frequency sweep experiments under field-, microwave amplitude-and microwave frequencymodulation detection modes (HM, AM, and FM, respectively). The spectrometer is based on a coplanar waveguide (CPW) architecture, with the sample being deposited on top of the transmission line. We tested the functionality of this spectrometer by measuring a standard 2,2-diphenyl-1-(2,4,6trinitrophenyl)hydrazyl (DPPH) sample, and complex (N n Bu 4) 2 [Cu 3 (μ 3-Cl) 2 (μ-pz) 3 Cl 3 ] (1), dropcasted on the CPW. Complex 1 had been previously studied by conventional X-band EPR spectroscopy (Chem. Eur. J. 2020, 26, 12769-1784) and comparison with the past studies, validated the functionality of the spectrometer and confirmed the stability of the sample upon deposition. Moreover, our results highlighted the importance of surface effects and of the orientation of the microwave magnetic component B 1 on the lineshapes of the recorded spectra.

  • Antimicrobial Peptides: A Potent Alternative to Antibiotics

    Mariam Rima, Mohamad Rima, Ziad Fajloun, Jean-Marc Sabatier, Burkhard Bechinger, Thierry Naas
    Antibiotics, 2021, 10 (9), pp.1095. ⟨10.3390/antibiotics10091095⟩ | Publiée le 10 septembre 2021
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    Antimicrobial peptides constitute one of the most promising alternatives to antibiotics since they could be used to treat bacterial infections, especially those caused by multidrug-resistant pathogens. Many antimicrobial peptides, with various activity spectra and mechanisms of actions, have been described. This review focuses on their use against ESKAPE bacteria, especially in biofilm treatments, their synergistic activity, and their application as prophylactic agents. Limitations and challenges restricting therapeutic applications are highlighted, and solutions for each challenge are evaluated to analyze whether antimicrobial peptides could replace antibiotics in the near future.

  • Reappraisal of archaeal C20-C25 diether lipid (extended archaeol) origin and use as a biomarker of hypersalinity

    Flore Vandier, Maxime Tourte, Cara Doumbe-Kingue, Julien Plancq, Philippe Schaeffer, Phil M. Oger, Vincent Grossi
    Organic Geochemistry, 2021, 159, pp.104276. ⟨10.1016/j.orggeochem.2021.104276⟩ | Publiée le 1 septembre 2021
    Article dans une revue

    The diether core membrane lipid sesterterpanyl-phytanyl-glycerol (so-called extended archaeol and often abbreviated C 20-C 25) is considered as a hallmark of Haloarchaea, a clade of archaea thriving under extreme high salinities. We here report about extended archaeol occurrence in different saline aquatic settings with salinity ranging from ca. 50 psu (5 % NaCl w/v) to saturation (ca. 350 psu). This demonstrates that this lipid is not restricted to extreme saline environments but suggests a minimum salinity threshold of ca. 50 psu above which C 20-C 25 is most commonly produced. The proportion of C 20-C 25 relative to that of archaeol (C 20-C 20) did not appear linearly dependent on the salinity of the site and was potentially also influenced by pH and temperature, preventing its direct use as a quantitative salinity proxy based on the present data set. An extensive literature review of archaeal membrane lipid compositions further highlighted that taxonomy also contributes to the distribution of this lipid in the environment and identifies Natrialbales (one of the three orders of Haloarchaea) as the main source. Statistical analysis showed that, among Haloarchaea, C 20-C 25 producers display pH and salinity growth optima slightly higher than non-producers and are distributed within two distinct groups, one composed mostly of neutrophiles and one of alkaliphiles. In contrast, the presence of C 20-C 25 was not correlated to the optimal growth temperature of the strains. This suggests that two confounding parameters, i.e., taxonomy and adaptation to changes in salinity and/or pH, contribute to the distribution of C 20-C 25 within Haloarchaea.

  • Efficiency of dihydroxamic and trihydroxamic siderochelates to extract uranium and plutonium from contaminated soils

    Laureline Février, Frédéric Coppin, Sylvie Pierrisnard, Mélanie Bourdillon, Lé Vi Nguyen, Nissrine Zaiter, Stéphane Brandès, Vladimir Sladkov, Jean-Claude Chambron, Michel Meyer
    Journal of Environmental Radioactivity, 2021, 235-236, pp.106645. ⟨10.1016/j.jenvrad.2021.106645⟩ | Publiée le 1 septembre 2021
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    Actinide-based mineral phases occurring in contaminated soils can be solubilized by organic chelators excreted by plants, such as citrate. Herein, the efficiency of citrate towards U and Pu extraction is compared to that of siderophores, whose primary function is the acquisition of iron(III) as an essential nutrient and growth factor for many soil microorganisms. To that end, we selected desferrioxamine B (DFB) as an emblematic bacterial trishydroxamic siderophore and a synthetic analog, abbreviated (LCy,Pr)H2, of the tetradentate rhodotorulic acid (RA) produced by yeasts. Firstly, the uranyl speciation with both ligands was assessed in the pH range 2–11 by potentiometry and visible absorption spectrophotometry. Equilibrium constants and absorption spectra for three [UO2(DFB)Hh](h–1)+ (h = 1–3) and five [UO2(LCy,Pr)lHh](2+h–2l)+ (–1  h  1 for l = 1 and h = 0–1 for l = 2) solution complexes were determined at 25.0 °C and I = 0.1 M KNO3. Similar studies for the Fe3+/(LCy,Pr)2– system revealed the formation of five species having [Fe(LCy,Pr)]+, [Fe(LCy,Pr)OH], [Fe(LCy,Pr)(OH)2]–, [Fe(LCy,Pr)2H], and [Fe2(LCy,Pr)3] compositions. Then, the ability of DFB, (LCy,Pr)H2, and citrate to solubilize either U or Pu from pitchblende-rich soils (soils 1 and 2) or freshly plutonium-contaminated soils (LBS and PG) was evaluated by performing batch extraction tests. U was extracted significantly only by citrate after a day. After one week, the amount of U complexed by citrate only slightly exceeded that measured for the siderochelates, following the order citrate > (LCy,Pr)H2  DFB  H2O, and were comparatively very low. Pu was also more efficiently extracted by citrate than by DFB after a day, but only by a factor of ~2–3 for the PG soil, while the Pu concentration in the supernatant after one week was approximately the same for both natural chelators. It remained nearly constant for DFB between the 1st and 7th day, but drastically decreased in the case of citrate, suggesting chemical decomposition in the latter case. For the Fe-rich soils 1 and 2, the efficiencies of the three chelators to solubilize Fe after a day were of the same order of magnitude, decreasing in the order DFB > citrate > (LCy,Pr)H2. However, after a week DFB had extracted ~1.5 times more Fe, whereas the amount extracted by the other chelators stayed constant. For the less Fe-rich LBS and PG soils contaminated by Pu, the amounts of extracted Fe were higher, especially after 7 days, and the DFB outperformed citrate by a factor of nearly 3. The higher capacity of the hexadentate DFB to extract Pu in the presence of Fe and its lower ability to mobilize U qualitatively agree with the respective complexation constant ratios, keeping in mind that both Pu-containing soils had a lower iron loading. Noticeably, (LCy,Pr)H2 has roughly the same capacity as DFB to solubilize U, but it mobilizes less Fe than the hexadentate siderophore. Similarly, citrate has the highest capacity to extract Pu, but the lowest to extract Fe. Therefore, compared to DFB, (LCy,Pr)H2 shows a better U/Fe extraction selectivity and citrate shows a better Pu/Fe selectivity.

  • Bypassing the Resistance Mechanisms of the Tumor Ecosystem by Targeting the Endoplasmic Reticulum Stress Pathway Using Ruthenium- and Osmium-Based Organometallic Compounds: An Exciting Long-Term Collaboration with Dr. Michel Pfeffer

    Christian Gaiddon, Isabelle Gross, Xiangjun Meng, Marjorie Sidhoum, Georg Mellitzer, Benoit Romain, Jean-Batiste Delhorme, Aïna Venkatasamy, Alain Jung, Michel Pfeffer
    Molecules, 2021, 26 (17), pp.5386. ⟨10.3390/molecules26175386⟩ | Publiée le 1 septembre 2021
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    Metal complexes have been used to treat cancer since the discovery of cisplatin and its interaction with DNA in the 1960’s. Facing the resistance mechanisms against platinum salts and their side effects, safer therapeutic approaches have been sought through other metals, including ruthenium. In the early 2000s, Michel Pfeffer and his collaborators started to investigate the biological activity of organo-ruthenium/osmium complexes, demonstrating their ability to interfere with the activity of purified redox enzymes. Then, they discovered that these organo-ruthenium/osmium complexes could act independently of DNA damage and bypass the requirement for the tumor suppressor gene TP53 to induce the endoplasmic reticulum (ER) stress pathway, which is an original cell death pathway. They showed that other types of ruthenium complexes—as well complexes with other metals (osmium, iron, platinum)—can induce this pathway as well. They also demonstrated that ruthenium complexes accumulate in the ER after entering the cell using passive and active mechanisms. These particular physico-chemical properties of the organometallic complexes designed by Dr. Pfeffer contribute to their ability to reduce tumor growth and angiogenesis. Taken together, the pioneering work of Dr. Michel Pfeffer over his career provides us with a legacy that we have yet to fully embrace.

  • One hundred years of allergic contact dermatitis due to oxidized terpenes: What we can learn from old research on turpentine allergy

    Ann‐therese Karlberg, Jean-Pierre Lepoittevin
    Contact Dermatitis, 2021, ⟨10.1111/cod.13962⟩ | Publiée le 28 août 2021
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    Background: Although in recent years the focus on sensitizing terpene oxidation products has been on oxidized limonene and linalool, the autoxidation of terpenes in relation to allergic contact dermatitis is not new and dates back to the early part of the 20th century with the use of turpentine causing occupational contact dermatitis in painters. Methods: This review is written in a way as to allow us to get closer to the work of the scientists in earlier days, to participate in the successes but also to observe the weak points. Results: The researchers concluded that the main culprit in Scandinavian turpentine was 3- carene hydroperoxides. This explains its high sensitizing effect compared to French turpentine which is of the Iberian type with no or only traces of 3- carene. Historical exposure to turpentine showed that ending the industrial exposure ended the occupational skin sensitization. Conclusion: Patch tests studies demonstrated that monoterpene hydroperoxides, far from being an obsolete source of contact allergy solely related to turpentine, is a common cause of contact allergy in the population. A hundred years of extensive chemical and clinical studies worldwide should be sufficient to meet the evidence requirement regarding allergic contact dermatitis caused by terpenes.

  • Chalcogen Bonding Catalysis with Telluronium Cations

    Robin Weiss, Emmanuel Aubert, Patrick Pale, Victor Mamane
    Angewandte Chemie International Edition, 2021, 60 (35), pp.19281-19286. ⟨10.1002/anie.202105482⟩ | Publiée le 23 août 2021
    Article dans une revue

    Chalcogen bonding results from non-covalent interactions occurring between electrodeficient chalcogen atoms and Lewis bases. Among the chalcogens, tellurium is the strongest Lewis acid, but Te-based compounds are scarcely used as organocatalysts. For the first time, telluronium cations demonstrated impressive catalytic properties at low loadings in three benchmark reactions: the Friedel–Crafts bromination of anisole, the bromolactonization of ω-unsaturated carboxylic acids and the aza-Diels–Alder between Danishefsky's diene and imines. The ability of telluronium cations to interact with a Lewis base through chalcogen bonding was demonstrated on the basis of multi-nuclear (17O, 31P, and 125Te) NMR analysis and DFT calculations.

  • Towards the sustainable discovery and development of new antibiotics

    Marcus Miethke, Marco Pieroni, Tilmann Weber, Mark Brönstrup, Peter Hammann, Ludovic Halby, Paola B. Arimondo, Philippe Glaser, Bertrand Aigle, Helge B. Bode, Rui Moreira, Yanyan Li, Andriy Luzhetskyy, Marnix H. Medema, Jean-Luc Pernodet, Marc Stadler, José Rubén Tormo, Olga Genilloud, Andrew W. Truman, Kira J. Weissman, Eriko Takano, Stefano Sabatini, Evi Stegmann, Heike Brötz-Oesterhelt, Wolfgang Wohlleben, Myriam Seemann, Martin Empting, Anna K. H. Hirsch, Brigitta Loretz, Claus-Michael Lehr, Alexander Titz, Jennifer Herrmann, Timo Jaeger, Silke Alt, Thomas Hesterkamp, Mathias Winterhalter, Andrea Schiefer, Kenneth Pfarr, Achim Hoerauf, Heather Graz, Michael Graz, Mika Lindvall, Savithri Ramurthy, Anders Karlén, Maarten van Dongen, Hrvoje Petkovic, Andreas Keller, Frédéric Peyrane, Stefano Donadio, Laurent Fraisse, Laura J. V. Piddock, Ian H. Gilbert, Heinz E. Moser, Rolf Müller
    Nature Reviews Chemistry, 2021, 5 (10), pp.726-749. ⟨10.1038/s41570-021-00313-1⟩ | Publiée le 19 août 2021
    Article dans une revue

    An ever-increasing demand for novel antimicrobials to treat life-threatening infections caused by the global spread of multidrug-resistant bacterial pathogens stands in stark contrast to the current level of investment in their development, particularly in the fields of natural-product-derived and synthetic small molecules. New agents displaying innovative chemistry and modes of action are desperately needed worldwide to tackle the public health menace posed by antimicrobial resistance. Here, our consortium presents a strategic blueprint to substantially improve our ability to discover and develop new antibiotics. We propose both short-term and long-term solutions to overcome the most urgent limitations in the various sectors of research and funding, aiming to bridge the gap between academic, industrial and political stakeholders, and to unite interdisciplinary expertise in order to efficiently fuel the translational pipeline for the benefit of future generations.

  • Chemical Modifications Induced by Phthalic Anhydride, a Respiratory Sensitizer, in Reconstructed Human Epidermis: A Combined HRMAS NMR and LC-MS/MS Proteomic Approach

    Minh Thuong Khong, Valerie Berl Bauder, Lauriane Kuhn, Philippe Hammann, Jean-Pierre Lepoittevin
    Chemical Research in Toxicology, 2021, ⟨10.1021/acs.chemrestox.1c00172⟩ | Publiée le 9 août 2021
    Article dans une revue

    Chemical skin and respiratory allergies are becoming a major health problem. To date our knowledge on the process of protein haptenation is still limited and mainly derived from studies performed in solution using model nucleophiles. In order to better understand chemical interactions between chemical allergens and the skin, we have investigated the reactivity of phthalic anhydride 1 (PA), a chemical respiratory sensitizer, towards reconstructed human epidermis (RHE). This study was performed using a new approach combining HRMAS NMR to investigate the in situ chemical reactivity and LC-MS/MS to identify modified epidermal proteins. In RHE, the reaction of PA appeared to be quite fast and the major product formed was phthalic acid. Two amide type adducts on lysine residues were observed and after 8h of incubation, we also observed the formation of an imide type cyclized adducts with lysine. In parallel, RHE samples topically exposed to phthalic anhydride (13C)-1 were analyzed using the shotgun proteomics method. Thus, 948 different proteins were extracted and identified, 135 of which being modified by PA i.e. 14.2% of the extracted proteome. A total of 211 amino acids were modified by PA and validated by fragmentation spectra. We thus identified 154 modified lysines ,22 modified histidines , 30 modified tyrosines and 5 modified arginines. The rate of modified residues, as a proportion of the total number of modifiable nucleophilic residues in RHE, was rather low (1%). At the protein level, modified proteins were mainly type I and type II keratins and other proteins which are abundant in the epidermis such as protein S100A, Caspase 14, annexin A2, serpin B3, Fatty-acid binding protein 5, histone H2, H3, H4 etc. However, the most modified protein, mainly on histidine residues, was filaggrin, a protein that is of low abundance (0.0266 mol%) and rich in histidine.

  • CEToolbox: Specialized calculator for capillary electrophoresis users as an android application

    Yannis François, Michael Biacchi, Rabah Gahoual, Aurélien Vezin, Jerôme Pansanel
    Electrophoresis, 2021, 42 (14-15), pp.1431-1435. ⟨10.1002/elps.202100036⟩ | Publiée le 3 août 2021
    Article dans une revue

    CE has been demonstrated to be a useful and powerful separation method for the characterization of charged and neutral molecules. Since the end of the 80s and the development of the first commercialized CE device, the use of this separation method has continued to grow for academic and industrial research involving inexorably increasing of the number of CE users. Whatever the application domain, each CE user is daily confronted to the same problems often based on basic calculations of separation properties. In order to help the community of CE users to get quickly and easily a lot of information, and desiring to provide a tool running on mobile platforms, CEToolbox has been developed as a free Android application. Within few clicks, CEToolbox offers extensive injection information as injected volume, total capillary volume, proportion and amount of injected sample, rinsing time and electrical field. Moreover, three additional tabs allow to obtain the calculation of the viscosity and the conductivity of background electrolyte (BGE), and the separation flow rates. Finally, a last tab is dedicated to the calculation of electroosmotic mobility and effective mobilities for a maximum of 20 compounds. CEToolbox, which can be downloaded for free on Google and F-Droid application stores, was developed to simplify the daily of CE users regardless of the CE devices.

  • Synthesis, electronic and photophysical properties of a bisacridinium-Zn(II) porphyrin conjugate

    Amy Edo-Osagie, Daniel Sánchez-Resa, Dylan Serillon, Elisa Bandini, Christophe Gourlaouen, Henri-Pierre Jacquot de Rouville, Barbara Ventura, Valérie Heitz
    Comptes Rendus. Chimie, 2021, 24 (S3), pp.1-9. ⟨10.5802/crchim.100⟩ | Publiée le 30 juillet 2021
    Article dans une revue

    The synthesis of a novel bisacridinium-Zn(II) porphyrin is reported and its properties investigated via electrochemical, photophysical and computational studies. Cyclic voltammetry studies revealed a two-electron oxidation of the Zn(II) porphyrin and the simultaneous one electron reductions of the two acridiniums. Using absorption, emission and ultrafast transient absorption spectroscopies, the near total fluorescence quenching observed following excitation of either the acridinium or Zn(II) porphyrin units was assigned to ultrafast electron transfer (≤0.3 ps) leading to a reduced acridinium and an oxidized porphyrin unit in the bisacridinium-Zn(II) porphyrin conjugate. In addition, computational studies were found to complement experimental results, with calculations revealing two near degenerate HOMOs for the porphyrin.

  • Fate of Cobaltacycles in Cp*Co-mediated C-H bond Functionalization Catalysis: Cobaltacycles May Collapse upon Oxidation via Co(IV) species

    Fule Wu, Christophe Deraedt, Yann Cornaton, Laurent Ruhlmann, Lydia Karmazin, Corinne Bailly, Nathalie Kyritsakas, Nolwenn Le Breton, Sylvie Choua, Jean-Pierre Djukic
    Organometallics, 2021, 40 (15), pp.2624-2642. ⟨10.1021/acs.organomet.1c00301⟩ | Publiée le 28 juillet 2021
    Article dans une revue

    Recent reports have identified Cp*Co-based complexes as powerful catalysts for aromatic C-H bond activation under oxidative conditions. However, little is known about the speciation of Cp*Co species during catalysis. We now show that key intermediates, Cp*Co(III) metallacycles derived from 2-phenylpyridine (phpy-H), react swiftly in solution with one-electron oxidants to irreversibly collapse by a cyclocondensation of the organic ligands to afford cationic alkaloids in yields of >70 %. Low temperature EPR analysis of a mixture of cobaltacycle with the tritylium cation reveals the signatures of trityl and Co(IV)-centred radicals. Electrochemical analyses show that the oxidation of these cobaltacycles is irreversible and gives rise to several products in various amounts, among which the most salient ones are a cationic alkaloid resulting from the cyclocondensation of the phpy and Cp* ligands, and the dimeric cation {[Cp*Co] 2 (-I) 3 } +. DFT investigations of relevant noncovalent interactions using QTAIMbased NCI plots and Intrinsic Bond Strength Index suggest a ligand-dependent predisposition by "NCI-coding" for the Co(IV)templated cyclocondensation, the computed reaction network energy profile for which supports the key roles of a short lived Co(IV) metallacycle and of a range of triplet state organocobalt intermediates.

  • Transition Metal Chain Complexes Supported by Soft Donor Assembling Ligands

    Pierre Braunstein, Andreas A. Danopoulos
    Chemical Reviews, 2021, 121 (13), pp.7346-7397. ⟨10.1021/acs.chemrev.0c01197⟩ | Publiée le 14 juillet 2021
    Article dans une revue

    The chemistry of discrete molecular chains constituted by metals in low oxidation states, displaying metal–metal proximity and stabilized by suitable metal-bridging, assembling ligands comprising at least one soft donor atom is comprehensively reviewed; complexes with a single (hard or soft) bridging atom (e.g., μ-halide, μ-sulfide, or μ-PR2etc.) as well as “closed” metal arrays (that fall in the realm of cluster chemistry) are excluded. The focus is on transition metal-based systems, with few excursions to cases combining transition and post-transition elements. Most relevant supporting ligands have neutral C, P, O, or S donor (mainly, N-heterocyclic carbene, phosphine, ether, thioether) or anionic donor (mainly phenyl, ylide, silyl, phosphide, thiolate) groups. A supporting-ligand-based classification of the metal chains is introduced, using as the classifying parameter the number of “bites” (i.e., ligand bridges) subtending each intermetallic separation. The ligands are further grouped according to the number of donor atoms interacting with the metal chain (called denticity in the following) and the column of the Periodic Table to which the set of donor atoms belongs (in ascending order). A complementary metal-based compilation of the complexes discussed is also provided in a concise tabular form.

  • Copper Imbalance in Alzheimer’s Disease and Its Link with the Amyloid Hypothesis: Towards a Combined Clinical, Chemical, and Genetic Etiology

    Rosanna Squitti, Peter Faller, Christelle Hureau, Alberto Granzotto, Anthony R. White, Kasper P. Kepp
    Journal of Alzheimer's Disease, 2021, pp.1-19. ⟨10.3233/JAD-201556⟩ | Publiée le 2 juillet 2021
    Article dans une revue

    The cause of Alzheimer's disease (AD) is incompletely defined: To date, no mono-causal treatment has so far reached its primary clinical endpoints, probably due to the complexity and diverse neuropathology contributing to the neurodegenerative process. In the present paper we describe the plausible etiological role of copper (Cu) imbalance in the disease. Cu imbalance is strongly associated with neurodegeneration in dementia, but a complete biochemical etiology consistent with the clinical, chemical and genetic data is required to support that this association is causative, rather than just a correlator of disease. We hypothesize that a Cu imbalance in the aging human brain evolves as a gradual shift from bound metal ion pools, associated with both loss of energy production and antioxidant function, to pools of loosely bound metal ions, involved in gain-of-function oxidative stress, a shift that may be aggravated by chemical aging. We explain how this may cause mitochondrial deficits, energy depletion of high-energy demanding neurons, and aggravated protein misfolding/oligomerization to produce different clinical consequences shaped by the severity of risk factors, additional comorbidities, and combinations with other types of pathology. Cu imbalance should be viewed and integrated with concomitant genetic risk factors, aging, metabolic abnormalities, energetic deficits, neuroinflammation, and the relation to Tau, prion proteins, α-synuclein, TAR DNA binding protein-43 (TDP-43) as well as systemic comorbidity. Specifically, the Amyloid Hypothesis is strongly intertwined with Cu imbalance because amyloid-β protein precursor (AβPP)/Aβ are Cu/Zn binding proteins with a potential role as natural Cu/Zn buffering proteins (loss of function), and due to toxic functions of Cu-Aβ.

  • Structural investigation of the catalytic activity of Fe(III) and Mn(III) Schiff base complexes

    Sabrina Bendia, Riadh Bourzami, Jean Weiss, Kamel Ouari
    Polyhedron, 2021, 202, pp.115206. ⟨10.1016/j.poly.2021.115206⟩ | Publiée le 1 juillet 2021
    Article dans une revue

    Two novel manganese (III) and iron (III) complexes of an N,N-bis(1-naphthalidimine)-o phenylene diamine ligand have been successfully synthesized and characterized by various analytical techniques including single crystal X-ray structure analysis. The ligand crystallizes in the monoclinic system with space group P21/c. The detailed analyses of Hirschfeld surface and fingerprint plots provide insight into the nature of non-covalent interactions in the ligand. Experimental data have been complemented and interpreted in the light of Density Functional Theory calculation was performed using the B3LYP method concerning molecular geometries, vibrational frequencies and electrochemical potentials. Cyclic voltammetry in dimethylformamide revealed reversible redox processes in both complexes, suggesting possible catalytic reactivity involving electron transfer process for these complexes. The catalytic efficiency and selectivity of manganese (III) and iron (III) complexes was tested in the oxidation of cyclohexene with molecular oxygen. The results show that the catalytic performance depends on the nature of metal, the most efficient catalyst in the presence of O2beingthe iron (III) complex. A plausible mechanism for cyclohexene oxidation by complexes is proposed and discussed hereafter.

  • Householder-transformed density matrix functional embedding theory

    Sajanthan Sekaran, Masahisa Tsuchiizu, M. Saubanère, Emmanuel Fromager
    Physical Review B, 2021, 104 (3), ⟨10.1103/PhysRevB.104.035121⟩ | Publiée le 1 juillet 2021
    Article dans une revue

    Quantum embedding based on the (one-electron-reduced) density matrix is revisited by means of the unitary Householder transformation. While being exact and equivalent to (but formally simpler than) density matrix embedding theory (DMET) in the noninteracting case, the resulting Householder-transformed density matrix functional embedding theory (Ht-DMFET) preserves, by construction, the single-particle character of the bath when electron correlation is introduced. In Ht-DMFET, the projected “impurity+bath” cluster's Hamiltonian (from which approximate local properties of the interacting lattice can be extracted) becomes an explicit functional of the density matrix. In the spirit of single-impurity DMET, we consider in this work a closed (two-electron) cluster constructed from the full-size noninteracting density matrix. When the (Householder-transformed) interaction on the bath site is taken into account, per-site energies obtained for the half-filled one-dimensional Hubbard lattice match almost perfectly the exact Bethe ansatz results in all correlation regimes. In the strongly correlated regime, the results deteriorate away from half-filling. This can be related to the electron number fluctuations in the (two-site) cluster which are neither described in Ht-DMFET nor in regular DMET. As expected, the per-site energies dramatically improve when increasing the number of embedded impurities. Formal connections with density/density matrix functional theories have been briefly discussed and should be explored further. Work is currently in progress in this direction.

  • Great enhancement of mechanical features in PLA based composites containing aligned few layer graphene (FLG), the effect of FLG loading, size and dispersion on mechanical and thermal properties

    Hamza El Marouazi, Benoit van der Schueren, Damien Favier, Anaëlle Bolley, Samuel Dagorne, Thierry Dintzer, Izabela Janowska
    Journal of Applied Polymer Science, 2021 | Publiée le 24 juin 2021
    Article dans une revue

    Four series of PLA based composite films containing horizontally aligned few layer graphene (FLG) flakes of high aspect ratio and adsorbed albumin are prepared. The mechanical and thermal properties vary with percentage, dispersion degree and size of FLG flakes. Great improvement up to 290 and 360% of tensile modulus and strength respectively was obtained for the composite containing high lateral size of FLG at 0.17% wt., and up to 60 and 80% for the composite with very well dispersed 0.02% wt. FLG. The composites of PLA and PEG-PLLA containing very well dispersed FLG flakes at 0.07 % wt. are ductile showing enhancement of elongation at break up to respectively 80 and 88%. Relatively high electrical conductivity, 5 x 10-3 S/cm, is measured for PLA film charged with 3% of FLG.

  • Protective role of the mitochondrial fusion protein OPA1 in hypertension

    Pauline Robert, Phuc Minh Chau Nguyen, Alexis Richard, Céline Grenier, Arnaud Chevrollier, Mathilde Munier, Linda Grimaud, Coralyne Proux, Tristan Champin, Eric Lelièvre, Emmanuelle Sarzi, Emilie Vessières, Samir Henni, Delphine Prunier, Pascal Reynier, Guys Lenaers, Céline Fassot, Daniel Henrion, Laurent Loufrani
    FASEB Journal, 2021, 35 (7), ⟨10.1096/fj.202000238RRR⟩ | Publiée le 16 juin 2021
    Article dans une revue

  • ORR activity of metalated phenanthroline-strapped porphyrin adsorbed on carbon nanotubes

    Manel Hanana, Christophe Kahlfuss, Jean Weiss, Renaud Cornut, Bruno Jousselme, Jennifer A Wytko, Stéphane Campidelli
    Comptes Rendus Chimie , 2021, ⟨10.5802/crchim.86⟩ | Publiée le 8 juin 2021
    Article dans une revue

    Developing efficient noble metal-free systems for electrocatalysis and the reduction of oxygen (ORR) is crucial for hydrogen economy. Bioinspired hybrids combining iron or copper/iron porphyrins with multiwalled carbon nanotubes were tested for ORR using a rotating ring-disk electrode at pH 13 to 8. The porphyrin-nanotube hybrids exhibited better electrocatalytic properties than their constituents alone due to the electrical network formed by the nanotubes, and they reduced oxygen via a four-electron pathway to produce water. Whereas the presence of Cu was not mandatory to reduce oxygen, its presence improved ORR activity and decreased the overpotential compared to monometalic (iron porphyrin) hybrids.

  • Mars moon ephemerides after 14 years of Mars Express data

    V. Lainey, A. Pasewaldt, V. Robert, P. Rosenblatt, R. Jaumann, J. Oberst, T. Roatsch, K. Willner, R. Ziese, W. Thuillot
    Astronomy & Astrophysics - A&A, 2021, 650, pp.A64. ⟨10.1051/0004-6361/202039406⟩ | Publiée le 1 juin 2021
    Article dans une revue

    The Mars Express (MEX) mission has been successfully operated around Mars since 2004. Among many results, MEX has provided some of the most accurate astrometric data of the two Mars moons, Phobos and Deimos. We present new ephemerides of the Mars moons benefitting from all previously published astrometric data to the most recent MEX SRC data. Observations from 1877 until 2018 and including spacecraft measurements from Mariner 9 to MEX were included. Assuming a homogeneous interior, we fitted the forced libration amplitude of Phobos simultaneously with the Martian tidal k 2 /Q ratio and the initial state of the moons. Our solution of the physical libration 1.09 ± 0.01 degrees deviates notably from the homogeneous solution. Considering the very low error bar, however, this may essentially suggest the necessity to consider higher order harmonics with an improved rotation model in the future. While most data could be successfully fitted, we found a disagreement between the Mars Reconnaissance Orbiter and the Mars Express astrometric data at the kilometer level, probably associated with a biased phase correction. The current solution precision is expected at the level of a few hundred meters for Phobos and several hundred meters for Deimos for the coming years. The real accuracy of our new ephemerides will have to be confirmed by comparison with independent observational means.

  • Growth, morphology and molecular orientation of controlled Indigo thin films on silica surfaces

    Arianna Rivalta, Cristiano Albonetti, Davide Biancone, Michele Della Ciana, Simone d'Agostino, Laure Biniek, Martin Brinkmann, Andrea Giunchi, Tommaso Salzillo, Aldo Brillante, Raffaele Guido Della Valle, Elisabetta Venuti
    Surfaces and Interfaces, 2021, 24, pp.101058. ⟨10.1016/j.surfin.2021.101058⟩ | Publiée le 1 juin 2021
    Article dans une revue

    Thin films of the natural semiconductor indigo have been grown on Si/SiO2 substrates by physical vapour deposition under ultra-high vacuum conditions, monitoring the influence of the deposition rate on structure, morphology and thickness. This was done to allow well-defined films to be made in a controlled way, suitable for the manufacture of organic devices and the investigation of charge transport phenomena. The films have been characterized by X-ray diffraction, atomic force microscopy, microRaman spectroscopy and transmission electron microscopy, finding that the growth at the solid interface of polymorph B, the only phase present in the films, is governed by the formation of strong multiple hydrogen-bonds between neighbouring molecules, which play a predominant role in the interface organization of the molecular assemblies.

  • Titanium Complexes with Functional Alkoxido Ligands for Selective Ethylene Dimerization – A High Throughput Experimentation Approach

    Fabien Grasset, Richard Welter, Pierre Braunstein, Hélène Olivier-Bourbigou, Lionel Magna
    ChemCatChem, 2021, 13 (9), pp.2167-2178. ⟨10.1002/cctc.202002029⟩ | Publiée le 7 mai 2021
    Article dans une revue

    New titanium complexes of general formula [Ti(OR)2(OiPr)2], containing functionalized alkoxido ligands, were developed for the selective catalytic dimerization of ethylene to 1-butene using a combined High Throughput Screening (HTS) / Design of Experiment (DoE) approach. First, a library of 19 ligands was elaborated and a primary screening spotted the phosphorus-functionalized alkoxido ligands as most promising. A second, more focused library containing 8 alkoxidophosphane ligands was then developed. A longer linear spacer between the alkoxido and the phosphorus functions, as in [Ti(19)2(OiPr)2], was found beneficial for this catalytic reaction. After identification of the best co-catalyst (AlEt3) and co-ligand (OnBu), final optimization of the reaction conditions was performed using a design of experiments (DoE) approach. The complex [Ti(19)2(OnBu)2] was shown to selectively dimerize ethylene in 1-butene (C4(α)=93 % (99+%)) at 30 bar C2H4 and 55 °C with AlEt3 as co-catalyst, resulting in very high activity and selectivity for a molecular titanium catalyst (13000 g gTi−1 h−1, 93 % 1-butene).

  • Stereochemical Control of Tricoordinate Copper(I) Complexes Based on N-(9-Alkyl-9-fluorenyl)-Substituted Heterocyclic Carbenes

    Hamze Almallah, Eric Brenner, Dominique Matt, Christophe Gourlaouen, Muriel Hissler
    Synthesis: Journal of Synthetic Organic Chemistry, 2021, 53 (10), pp.1785-1794. ⟨10.1055/s-0040-1706194⟩ | Publiée le 1 mai 2021
    Article dans une revue

    A series of tricoordinate copper(I) complexes of general formula [Cu(F-Et-NHC)(2,2'-dipyridylamine)][BF4], in which EtF-NHC represents an imidazol-2-ylidene ligand bearing a 9-ethyl-9-fluorenyl N-substituent have been synthesised stepwise from appropriate N-arylimidazoles. All complexes are remarkably air-stable, both in solution and in the solid state. X-ray diffraction studies revealed that in three of the complexes the fluorenylidene plane and the dipyridylamine (dpa) unit undergo intramolecular pi-pi stacking. The resulting bending of the fluorenilydene plane towards the metal atom is likely to contribute to maintain the trigonal planar geometry of the [Cu-C,N,N] unit upon binding of exogenous substrates, thereby considerably increasing complex stability.

  • High-resolution structural profile of hylaseptin-4: Aggregation, membrane topology and pH dependence of overall membrane binding process

    L.O. Nunes, V.H.O. Munhoz, A.A. Sousa, K.R. de Souza, T.L. Santos, M.P. Bemquerer, D.E.C. Ferreira, Mariana T.Q. de Magalhães, J.M. Resende, A.F.C. Alcântara, Christopher Aisenbrey, D.P. Veloso, Burkhard Bechinger, R.M. Verly
    Biochimica et Biophysica Acta:Biomembranes, 2021, 1863 (5), pp.183581. ⟨10.1016/j.bbamem.2021.183581⟩ | Publiée le 1 mai 2021
    Article dans une revue

  • Pathophysiological adaptations of resistance arteries in rat offspring exposed in utero to maternal obesity is associated with sex-specific epigenetic alterations

    Cyrielle Payen, Abigaëlle Guillot, Lily Paillat, Abel Fothi, Abdallah Dib, Jennifer Bourreau, Françoise Schmitt, Laurent Loufrani, Tamas Aranyi, Daniel Henrion, Mathilde Munier, Céline Fassot
    International Journal of Obesity, 2021, 45 (5), pp.1074-1085. ⟨10.1038/s41366-021-00777-7⟩ | Publiée le 1 mai 2021
    Article dans une revue

  • Different Biological Activities of Histidine-Rich Peptides Are Favored by Variations in Their Design

    Morane Lointier, Candice Dussouillez, Elise Glattard, Antoine Kichler, Burkhard Bechinger
    Toxins, 2021, 13 (5), pp.363. ⟨10.3390/toxins13050363⟩ | Publiée le 1 mai 2021
    Article dans une revue

    The protein transduction and antimicrobial activities of histidine-rich designer peptides were investigated as a function of their sequence and compared to gene transfection, lentivirus transduction and calcein release activities. In membrane environments, the peptides adopt helical conformations where the positioning of the histidine side chains defines a hydrophilic angle when viewed as helical wheel. The transfection of DNA correlates with calcein release in biophysical experiments, being best for small hydrophilic angles supporting a model where lysis of the endosomal membrane is the limiting factor. In contrast, antimicrobial activities show an inverse correlation suggesting that other interactions and mechanisms dominate within the bacterial system. Furthermore, other derivatives control the lentiviral transduction enhancement or the transport of proteins into the cells. Here, we tested the transport into human cell lines of luciferase (63 kDa) and the ribosome-inactivating toxin saporin (30 kDa). Notably, depending on the protein, different peptide sequences are required for the best results, suggesting that the interactions are manifold and complex. As such, designed LAH4 peptides assure a large panel of biological and biophysical activities whereby the optimal result can be tuned by the physico-chemical properties of the sequences.

  • Extracellular Cu2+ pools and their detection: From current knowledge to next-generation probes

    Enrico Falcone, Michael Okafor, Nicolas Vitale, Laurent Raibaut, Angélique Sour, Peter Faller
    Coordination Chemistry Reviews, 2021, 433 (5), pp.213727. ⟨10.1016/j.ccr.2020.213727⟩ | Publiée le 15 avril 2021
    Article dans une revue

    Copper (Cu) is an essential micronutrient for most organisms and serves mainly as a redox-active catalytic centre in enzymes cycling between Cu+ and Cu2+. Membrane transporters and shuttles are involved to bring and insert Cu into these enzymes and to control tightly the copper metabolism, whose failure can lead to severe diseases. The main oxidation state intracellularly is Cu+, whereas Cu2+ is mainly found in extracellular fluids. A basic approach to investigate Cu metabolism in vivo and in cellulo contemplates the use of luminescent (mostly fluorescent) or magnetic resonance imaging (MRI)-active probes. Here, we focus on sensors of the Cu2+ state. First, Cu metabolism and speciation are revised, The analysis of the literature on luminescent and MRI-active Cu2+ sensors applied in extracellular media shows indeed how challenging such measurement is, and that none of the sensors reported to date convincingly and specifically detects Cu2+ in a biological system. Indeed, when considering all the sought parameters, i.e. thermodynamics and kinetics of the Cu2+-sensor, the specificity towards Cu2+, the reversibility, the sensitivity of the luminescent or MRI response and hence the required sensor concentration, it becomes clear that this is a huge challenge and that we stand just at the dawn of this field.

  • Oxidative esterification of alcohols by a single-side organically decorated Anderson-type chrome-based catalyst

    Jingjing Wang, Feng Jiang, Chaofu Tao, Han Yu, Laurent Ruhlmann, Yongge Wei
    Green Chemistry, 2021, 23 (7), pp.2652-2657. ⟨10.1039/D1GC00161B⟩ | Publiée le 13 avril 2021
    Article dans une revue

    The exploration of non-noble metal systems in direct esterification of alcohols faces great challenges. Here, a new system using [N(C4H9)4]3[CrMo6O18(OH)3C(OCH2)3CH2OH}] as catalyst to realize the efficient transformation from alcohols to esters without organic ligands. A variety of alcohols are tolerated in this system. The chrome- based catalyst can be recycled several times and still keep the original configuration and catalytic activity. We also propose the reasonable catalytic mechanism and prove the potential for industrial applications.

  • An Asymmetric Mechanism in a Symmetric Molecular Machine

    Florian Blanc, Marco Cecchini
    Journal of Physical Chemistry Letters, 2021, 12 (13), pp.3260-3265. ⟨10.1021/acs.jpclett.1c00404⟩ | Publiée le 8 avril 2021
    Article dans une revue

    The design of molecular architectures exhibiting
functional motions is a promising area for disruptive technological
development. Toward this goal, rotaxanes and catenanes, which
undergo relative motions of their subunits in response to external
stimuli, are prime candidates. Here, we report on the computa-
tional analysis of the contraction/extension of a bistable [c2]daisy
chain rotaxane. Using free-energy calculations and transition path
optimizations, we explore the free-energy landscape governing the
functional motions of a prototypical molecular machine with
atomic resolution. The calculations reveal a sequential mechanism
in which the asynchronous gliding of each ring is preferred over the
concerted movement. Analysis of the underlying free-energy
surface indicates that the formation of partially rearranged intermediates entails crossing of much smaller barriers. Our findings illustrate an important design principle for molecular machines, namely that efficient exploitation of thermal fluctuations may be realized by breaking down the large-scale functional motions into smaller steps.

  • Material properties particularly suited to be measured with helium scattering: selected examples from 2D materials, van der Waals heterostructures, glassy materials, catalytic substrates, topological insulators and superconducting radio frequency materials

    Bodil Holst, Gil Alexandrowicz, Nadav Avidor, Giorgio Benedek, Gianangelo Bracco, Wolfgang E. Ernst, Daniel Farías, Andrew P. Jardine, Kim Lefmann, Joseph R. Manson, Roberto Marquardt, Salvador Miret Artés, Steven J. Sibener, Justin W. Wells, Anton Tamtögl, William Allison
    Physical Chemistry Chemical Physics, 2021, 23 (13), pp.7653-7672. ⟨10.1039/D0CP05833E⟩ | Publiée le 8 avril 2021
    Article dans une revue

  • Infrared spectroscopy quantification of functional carbon groups in kerogens and coals: A calibration procedure

    van T.H. Phan, Eric Quirico, Pierre Beck, Yann Le Brech, Lora Jovanovic, Corentin Le Guillou, Sylvain Bernard, Lydie Bonal, Nathalie Carrasco, Thomas Gautier, Jesus Raya
    Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy [1994-..], 2021, 259 (October), pp.119853. ⟨10.1016/j.saa.2021.119853⟩ | Publiée le 1 avril 2021
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    The determination of the abundances of the CH<sub>x</sub>, C=O and aromatic groups in chondritic Insoluble Organic Matter (IOM) and coals by Infrared (IR) spectroscopy is a challenging issue due to insufficient knowledge on the absorption cross-sections and their sensitivity to the molecular environment. Here, we report a calibration approach based on a <sup>13</sup>C synthetic model material whose composition was unambiguously determined by Direct-Pulse/Magic Angle Spinning Nuclear Magnetic Resonance (DP/MAS NMR). Ratios of the cross-sections of the CH<sub>x</sub>, C=O and aromatic groups have been determined, and the method has been applied to IOM samples extracted from four chondrites as Orgueil (CI), Murchison (CM), Tagish Lake (C2-ungrouped) and EET 92042 (CR), and to a series of coals. The estimate of the aliphatic to aromatic carbon ratio (n<sub>CHx/</sub>n<sub>Aro</sub>) in IOM samples from Orgueil, Murchison and Tagish Lake chondrites is in good agreement with Single-Pulse/NMR estimates earlier published, and is lower by a factor of 1.3 in the case of the CR chondrite EET 92042 (but the error bars overlap). In contrast, the aliphatic to carbonyl ratio (n<sub>CHx</sub>/n<sub>C=O</sub>) is overestimated for the four chondrites. These discrepancies are likely due to the control of the absorption cross-section of the C=O and C=C bonds by the local molecular environment. Regarding coals, the use of published NMR analyses has brought to light that the integrated cross-section ratio A<sub>CHx</sub>/A<sub>Aro</sub> varies with the vitrinite reflectance over an order of magnitude. Here as well, the local oxygen speciation plays a critical control in AAro, which decreases with increasing the vitrinite reflectance. We provide an analytical law that links A<sub>CHx</sub>/A<sub>Aro</sub> and vitrinite reflectance, which will allow the determination of n<sub>CHx</sub>/n<sub>Aro</sub> for any coal sample, provided its vitrinite reflectance is known.

  • Palladium(II) N^O chelating complexes catalyzed One-pot Approach for synthesis of Quinazolin-4(3H)-ones via acceptorless dehydrogenative coupling of Alcohols and 2-Aminobenzamide

    Sundarraman Balaji, Gunasekaran Balamurugan, Rengan Ramesh, David Semeril
    Organometallics, 2021, 40 (6), pp.725-734. ⟨10.1021/acs.organomet.0c00814⟩ | Publiée le 22 mars 2021
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    A convenient protocol for the one-pot synthesis of quinazolin-4(3H)-ones using palladium(II) complexes via dehydrogenative coupling of readily available benzyl alcohols and 2-aminobenzamide has been described. New structurally related Pd(II) N^O chelating complexes of general configuration [Pd(L)Cl(PPh 3)](where L = dimethylamino benzoylhydrazone ligands) have been designed and synthesized. The formation of the complexes has been recognized by analytical and spectral methods (FT-IR, NMR& HR-MS). The presence of a square-planar geometry around palladium (II) ion was confirmed by single crystal X-ray diffraction study. A wide range of substituted quinazolinones have been successfully achieved from diverse range of benzyl alcohols in good to excellent yields using 1.0 mol% of catalyst loading under aerobic conditions. Furthermore, control experiments reveal that the dehydrogenative coupling reaction involves initially via the formation of aldehyde intermediate and subsequent formation of cyclic aminal intermediate.

  • A Coumarin-Based Analogue of Thiacetazone as Dual Covalent Inhibitor and Potential Fluorescent Label of HadA in Mycobacterium tuberculosis

    Asma Farjallah, Laurent Chiarelli, Martin Forbak, Giulia Degiacomi, Mathieu Danel, Fernanda Goncalves, Chantal Carayon, Cendrine Seguin, Marco Fumagalli, Monika Záhorszká, Elodie Vega, Souhir Abid, Anna Grzegorzewicz, Mary Jackson, Antonio Peixoto, Jana Korduláková, Maria Rosalia Pasca, Christian Lherbet, Stefan Chassaing
    ACS Infectious Diseases, 2021, 7 (3), pp.552-565. ⟨10.1021/acsinfecdis.0c00325⟩ | Publiée le 12 mars 2021
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    A novel coumarin-based molecule, designed as a fluorescent surrogate of a thiacetazone-derived antitubercular agent, was quickly and easily synthesized from readily available starting materials. This small molecule, coined Coum-TAC, exhibited a combination of appropriate physicochemical and biological properties, including resistance toward hydrolysis and excellent antitubercular efficiency similar to that of well-known thiacetazone derivatives, as well as efficient covalent labeling of HadA, a relevant therapeutic target to combat Mycobacterium tuberculosis. More remarkably, Coum-TAC was successfully implemented as an imaging probe that is capable of labeling Mycobacterium tuberculosis in a selective manner, with an enrichment at the level of the poles, thus giving for the first time relevant insights about the polar localization of HadA in the mycobacteria.

  • Multibasin Quasi-Harmonic Approach for the Calculation of the Configurational Entropy of Small Molecules in Solution

    Gilberto P Pereira, Marco Cecchini
    Journal of Chemical Theory and Computation, 2021, 17 (2), pp.1133-1142. ⟨10.1021/acs.jctc.0c00978⟩ | Publiée le 9 février 2021
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    Entropy is a key thermodynamic property governing most biomolecular processes, including binding. Nonetheless, quantification of the configurational entropy of a single molecule in solution remains a grand challenge. Here, we present an original approach for the calculation of absolute molecular entropies based on the analysis of converged molecular dynamics (MD) simulations. Our method, named quasi-harmonic multibasin (QHMB), relies on a multibasin decomposition of the simulated trajectory by root-mean-square deviation clustering and subsequent quasi-harmonic analysis (QHA) of extracted sub-trajectories. Last, the entropy of the landscape is evaluated using the Gibbs formula. Because of the nature of QHA, this method is directly applicable to explicit-solvent simulations to access configurational entropies in solution. When compared with calorimetric data from NIST, QHMB is shown to predict absolute entropies in the gas phase for 23 small molecules with a root-mean-squared error of 0.36 kcal/mol from the experiments. In addition, the introduction of a QHMB correction in MM/GBSA calculations to account for the ligand configurational entropy loss on binding is shown to improve the correlation between calculated and experimental binding affinities with R2 increasing from 0.67 to 0.78. Because this entropy correction penalizes large and flexible ligands more strongly, it might be useful to reduce the false-positive rate in virtual screening. The availability of an automatic procedure to compute QHMB entropies makes it a new available tool in the field of drug discovery.

  • Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer’s Disease, Parkinson’s Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis

    Phuong H Nguyen, Ayyalusamy Ramamoorthy, Bikash R Sahoo, Jie Zheng, Peter Faller, John E Straub, Laura Dominguez, Joan-Emma Shea, Nikolay V Dokholyan, Alfonso de Simone, Buyong Ma, Ruth Nussinov, Saeed Najafi, Son Tung Ngo, Antoine Loquet, Mara Chiricotto, Pritam Ganguly, James Mccarty, Mai Suan Li, Carol Hall, Yiming Wang, Yifat Miller, Simone Melchionna, Birgit Habenstein, Stepan Timr, Jiaxing Chen, Brianna Hnath, Birgit Strodel, Rakez Kayed, Sylvain Lesné, Guanghong Wei, Fabio Sterpone, Andrew J Doig, Philippe Derreumaux
    Chemical Reviews, 2021, 121 (4), pp.2545-2647. ⟨10.1021/acs.chemrev.0c01122⟩ | Publiée le 5 février 2021
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    Protein misfolding and aggregation is observed in many amyloidogenic diseases affecting either the central nervous system or a variety of peripheral tissues. Structural and dynamic characterization of all species along the pathways from monomers to fibrils is challenging by experimental and computational means because they involve intrinsically disordered proteins in most diseases. Yet understanding how amyloid species become toxic is the challenge in developing a treatment for these diseases. Here we review what computer, in vitro, in vivo and pharmacological experiments tell us about the accumulation and deposition of the oligomers of the (Aβ, tau), α-synuclein, IAPP and superoxide dismutase 1 proteins, which have been the mainstream concept underlying Alzheimer's disease (AD), Parkinson's disease (PD), type II diabetes (T2D) and amyotrophic lateral sclerosis (ALS) research, respectively for over many years.

  • Functionalized 4,4'-bipyridines: synthesis and 2D-organization on HOPG

    Jimmy Richard, Jean Joseph, Can Wang, Artur Ciesielski, Jean Weiss, Paolo Samorì, Victor Mamane, Jennifer A Wytko
    Journal of Organic Chemistry, 2021, 86 (4), pp.3356-3366. ⟨10.1021/acs.joc.0c02708⟩ | Publiée le 4 février 2021
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    Commercial 4,4'-bipyridine is a popular scaffold which is primarily employed as a linker in 3D self-assembled architectures such as metallo-organic frameworks or as connector in 2D networks. The introduction of alkyl substituents on the bipyridine skeleton is instrumental when 4,4'-bipyridines are used as linkers to form 2D self-assembled patterns on surfaces. Here, various synthetic strategies to access 4,4'-bipyridines functionalized at various positions are described. These easily scalable reactions have been used to introduce a range of alkyl substituents at positions 2 and 2', or 3 and 3' and at positions 2,2' and 6,6' in the case of tetra-functionalization. Scanning tunneling microscopy studies of molecular monolayers physisorbed at the graphite-solution interface revealed different supramolecular patterns whose motifs are primarily dictated by the nature and position of the alkyl chains.

  • Cooperativity in Highly Active Ethylene Dimerization by Dinuclear Nickel Complexes Bearing a Bifunctional PN Ligand

    Chunyu Feng, Shengmei Zhou, Danbo Wang, Yingjie Zhao, Shaofeng Liu, Zhibo Li, Pierre Braunstein
    Organometallics, 2021, 40 (2), pp.184-193. ⟨10.1021/acs.organomet.0c00683⟩ | Publiée le 25 janvier 2021
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    In order to examine the possibility to promote cooperative effects on catalytic activity and selectivity in ethylene dimerization through ligand design, the bisphosphino-iminato ligands syn-L and anti-L were prepared to support the dinuclear nickel complexes syn-Ni2 and anti-Ni2. The Ni centers are successfully locked in relatively close proximity in syn-Ni2 (6.433(5) Å) but are much farther apart in anti-Ni2 because of the rigid anthracene skeleton. The mononuclear complex [NiBr2(C14H9-N═CH-C6H4-2-PPh2)] (Ni1) was also prepared for control experiments. In the presence of EtAlCl2, syn-Ni2 showed a remarkably high activity for ethylene dimerization (>90%) (up to 9.10 × 106 g (mol of Ni)−1 h–1), which is approximately 1.5- and 3.3-fold higher, respectively, than those of anti-Ni2 or of mononuclear Ni1. The redox properties of dinuclear complexes were studied by cyclic voltammetry (CV) and their comparison with those of the mononuclear complex indicates the possible existence of cooperativity between the two metal centers in the dinuclear structures. Although a detailed mechanism has not been elucidated, cooperative effects favor the isomerization of 1-butene, and dinuclear syn-Ni2 and anti-Ni2 exhibited higher selectivity for 2-butene in comparison to mononuclear Ni1 under otherwise identical reaction conditions.

  • Reproducibility Problems of Amyloid-β Self-Assembly and How to Deal With Them

    Peter Faller, Christelle Hureau
    Frontiers in Chemistry, 2021, 8, pp.611227. ⟨10.3389/fchem.2020.611227⟩ | Publiée le 14 janvier 2021
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    The self-assembly of peptides and proteins into amyloid fibrils and other aggregates are linked to several diseases. One of the most studied cases is the peptide amyloid-β (Aβ), found self-assembled in Alzheimer's disease patients' brains. In test tubes, assays with chemically synthesized or recombinant Aβ are widely investigated to understand the aggregation process and to find modulators, which could be of therapeutic interest. Experience over more than a decade in our laboratory through discussions with colleagues, expertly studying the literature, and as reviewers revealed to us the widely encountered difficulty to control the aggregation and obtain reproducible results in the test tube. However, this issue is scarcely reported and discussed in the publications, which we think hampers strongly the progress in this field and can deceive newcomers. Here, we describe the difficulty and potential reasons to obtain reproducible aggregation data and propose some guidelines for working with it.

  • Design of a targeting and oxygen-independent platform to improve photodynamic therapy: A proof of concept

    Ludivine Larue, Tataye Moussounda Moussounda Koumba, Nolwenn Le Breton, Bertrand Vileno, Philippe Arnoux, Valérie Jouan-Hureaux, Cédric Boura, Gerard Audran, Raphael Bikanga, Sylvain Marque, Samir Acherar, Céline Frochot
    ACS Applied Bio Materials, 2021, 4 (2), pp.1330-1339. ⟨10.1021/acsabm.0c01227⟩ | Publiée le 11 janvier 2021
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    Photodynamic therapy (PDT) is a promising technique to treat different kinds of disease especially cancer. PDT requires three elements: molecular oxygen, a photoactivatable molecule called the photosensitizer (PS), and appropriate light. Under illumination, the PSs generate, in the presence of oxygen, the formation of reactive oxygen species including singlet oxygen, toxic, which then destroys the surrounding tissues. Even if PDT is used with success to treat actinic keratosis or prostate cancer for example, PDT suffers from two major drawbacks: the lack of selectivity of most of the PSs currently used clinically as well as the need for oxygen to be effective. To remedy the lack of selectivity, targeting the tumor neovessels is a promising approach to destroy the vascularization and cause asphyxia of the tumor. KDKPPR peptide affinity for the neuropilin-1 (NRP-1) receptor overexpressed on endothelial cells has already been proven. To compensate for the lack of oxygen, we focused on photoactivatable alkoxyamines (Alks), molecules capable of generating toxic radicals by light activation. In this article, we describe the synthesis of a multifunctional platform combining three units: a PS for an oxygen-dependent PDT, a peptide to target tumor neovessels, and an Alk for an oxygen-independent activity. The synthesis of the compound was successfully carried out, and the study of its photophysical properties showed that the PS retained its capacity to form singlet oxygen and the affinity tests confirmed the affinity of the compound for NRP-1. Thanks to the electron paramagnetic resonance spectroscopy, a technique of choice for radical investigation, the radicals generated by the illumination of the Alk could be detected. The proof of concept was thus successfully established.

  • Enantioseparation of 5,5 -Dibromo-2,2 -Dichloro-3-Selanyl-4,4 -Bipyridines on Polysaccharide-Based Chiral Stationary Phases: Exploring Chalcogen Bonds in Liquid-Phase Chromatography

    Paola Peluso, Alessandro Dessì, Rober Dallocchio, Barbara Sechi, Carlo Gatti, Bezhan Chankvetad, Victor Mamane, Robin Weiss, Patrick Pale, Emmanuel Aubert, Sergio Cossu, Ashraf Ghanem, Derek J Mcphee
    Molecules, 2021, 26 (1), pp.221. ⟨10.3390/molecules26010221⟩ | Publiée le 4 janvier 2021
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    This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY

  • Membrane Interactions Accelerate the Self-Aggregation of Huntingtin Exon 1 Fragments in a Polyglutamine Length-Dependent Manner

    Arnaud Marquette, Christopher Aisenbrey, Burkhard Bechinger
    International Journal of Molecular Sciences, 2021, 22 (13), pp.6725. ⟨10.3390/ijms22136725⟩ | Publiée le 1 janvier 2021
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    The accumulation of aggregated protein is a typical hallmark of many human neurodegenerative disorders, including polyglutamine-related diseases such as chorea Huntington. Misfolding of the amyloidogenic proteins gives rise to self-assembled complexes and fibres. The huntingtin protein is characterised by a segment of consecutive glutamines which, when exceeding ~ 37 residues, results in the occurrence of the disease. Furthermore, it has also been demonstrated that the 17-residue amino-terminal domain of the protein (htt17), located upstream of this polyglutamine tract, strongly correlates with aggregate formation and pathology. Here, we demonstrate that membrane interactions strongly accelerate the oligomerisation and β-amyloid fibril formation of htt17-polyglutamine segments. By using a combination of biophysical approaches, the kinetics of fibre formation is investigated and found to be strongly dependent on the presence of lipids, the length of the polyQ expansion, and the polypeptide-to-lipid ratio. Finally, the implications for therapeutic approaches are discussed.

  • A 3D electropolymerized thin film based on an isoporphyrin and on a pyridine end-decorated molybdenum(II) halide cluster: Photoelectrochemical and impedance properties

    Yiming Liang, Maxim Sokolov, Maxim Mikhaylov, Helen Ibrahim, Michel Goldmann, Sylvie Choua, Nolwenn Le Breton, Corinne Boudon, Vasilica Badets, Antoine Bonnefont, Laurent Ruhlmann
    Electrochimica Acta, 2021, 388, pp.138493. ⟨10.1016/j.electacta.2021.138493⟩ | Publiée le 1 janvier 2021
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    Herein, the first example of formation of a 3D hybrid organic-inorganic copolymer based on an isoporphyrin and on a pyridine end-decorated molybdenum(II) halide cluster. The isoporphyrin copolymer thin film was obtained by electropolymerization of zinc-5,15-bis(p-tolyl)porphyrin in the presence of polyiodometalate with 6 pendant pyridyl ligands (((Bu4N)2[{Mo6I8}(OOC-C5H4N)6]). Electrogenerated porphyrin radical cation is a powerful electrophile which can rapidly react with the pyridine end-decorated Mo(II) halide cluster as nucleophile to form 3D copolymer containing stable isoporphyrin. The electropolymerization was monitored by electrochemical quartz crystal microbalance (EQCM). The copolymer was characterized by UV-Vis-NIR spectroscopy, X-ray photoelectron spectroscopy (XPS), electrochemistry, and atomic force microscopy (AFM). The existence of the radical of the isoporphyrin copolymer was proved by electron spin resonance spectroscopy (EPR). Interestingly, the UV-Vis-NIR spectra of the copolymer exhibited broadening and splitting of the Soret band as well as one additional band in the NIR between 750 nm and 1000 nm. The photoelectrochemical properties have been studied by electrochemical impedance spectroscopy and by photocurrent transient measurements under visible-NIR light irradiation. The 3D copolymer containing stable isoporphyrin radical exhibits interesting photocurrent response even under only NIR illumination. In the solid state, the 3D copolymer could be stored for over several months and even one year without any degradation under ambient conditions in air.

  • Phosphines and other P(III)-derivatives with Cavity-shaped Subunits: Valuable Ligands for Supramolecular Metal Catalysis, Metal Confinement and Subtle Steric Control.

    Dominique Matt, Jack Harrowfield
    ChemCatChem, 2021, 13 (1), pp.153-168. ⟨10.1002/cctc.202001242⟩ | Publiée le 1 janvier 2021
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    A review. Tertiary phosphines and other P(III)-derivs. are the par excellence ligands in industrially relevant homogeneous catalysis. A promising, recent development in this field concerns the use of P(III)-compds. that incorporate cavity-shaped subunits capable of assisting metal-centered reactions, either by functioning as receptor moieties, creating confinement about the reactive center or merely by influencing main catalytic steps via strong steric interactions exerted on the metal first coordination sphere. This Mini, which is based on selected examples, illustrates the utility of covalently-constructed phosphines that incorporate a cavity and highlights future directions that deserve development in ligand design. [on SciFinder(R)]

  • Fabrication of Oriented n‐Type Thermoelectric Polymers by Polarity Switching in a DPP‐Based Donor–Acceptor Copolymer Doped with FeCl 3

    Huiyan Zeng, Mohammed Mohammed, Viktoriia Untilova, Olivier Boyron, Nicolas Berton, Patrice Limelette, Bruno Schmaltz, Martin Brinkmann
    Advanced Electronic Materials, 2021, 7 (5), pp.2000880. ⟨10.1002/aelm.202000880⟩ | Publiée le 1 janvier 2021
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    n‐Type‐doped polymers are key elements to fabricate all‐polymer thermoelectric generators but they are challenging to produce. Herein, a new strategy is proposed, which is based on polarity switching upon doping of a donor–acceptor (D–A) copolymer based on diketopyrrolopyrrol (DPP) and quintethiophene (5T) with FeCl3. Polarity switching from p‐type to n‐type is observed upon increasing the doping concentration of FeCl3. An analysis based on nonmonotonic density of states is proposed, which accounts for the main experimental trends and demonstrates that the polarity switch is governed by the electronic band filling that is determined by the dopant concentration. The influence of the curvature of the density of states is in addition discussed and a complete description of the doping induced transport regimes is proposed. This polarity switching depends on the molecular weight Mn of the polymer and shifts to higher FeCl3 concentrations with increasing Mn. This behavior is attributed to the change of the width of the density of states with Mn. The combination of polarity switching and alignment is a means to produce n‐type‐like oriented and conducting polymers with enhanced power factors up to 10 µW K−2 m−1 along the chain direction.

  • Encoding strongly-correlated many-boson wavefunctions on a photonic quantum computer: application to the attractive Bose-Hubbard model

    Saad Yalouz, Bruno Senjean, Filippo Miatto, Vedran Dunjko
    Quantum, 2021, 5, pp.572. ⟨10.22331/q-2021-11-08-572⟩ | Publiée le 1 janvier 2021
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    Variational quantum algorithms (VQA) are considered as some of the most promising methods to determine the properties of complex strongly correlated quantum many-body systems, especially from the perspective of devices available in the near term. In this context, the development of efficient quantum circuit ansatze to encode a many-body wavefunction is one of the keys for the success of a VQA. Great efforts have been invested to study the potential of current quantum devices to encode the eigenstates of fermionic systems, but little is known about the encoding of bosonic systems. In this work, we investigate the encoding of the ground state of the (simple but rich) attractive Bose-Hubbard model using a Continuous-Variable (CV) photonic-based quantum circuit. We introduce two different ansatz architectures and demonstrate that the proposed continuous variable quantum circuits can efficiently encode (with a fidelity higher than 99%) the strongly correlated many-boson wavefunction with just a few layers, in all many-body regimes and for different number of bosons and initial states. Beyond the study of the suitability of the ansatz to approximate the ground states of many-boson systems, we also perform initial evaluations of the use of the ansatz in a variational quantum eigensolver algorithm to find it through energy minimization. To this end we also introduce a scheme to measure the Hamiltonian energy in an experimental system, and study the effect of sampling noise.

  • Recent Representative Advances on the Synthesis and Reactivity of N ‐heterocyclic‐carbene‐supported Zinc Complexes

    David Specklin, Christophe Fliedel, Samuel Dagorne
    Chemical Record, 2021, 21 (5), pp.1130-1143. ⟨10.1002/tcr.202100041⟩ | Publiée le 1 janvier 2021
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    The present account reviews the most recent noteworthy developments on the synthesis, structure and catalytic applications of Zn‐NHC species, a class of complexes that have attracted attention over the past five to ten years due to their enhanced robustness and hydrolytic stability versus classical Zn organometallics. In particular, thanks to NHC stabilization, access to unprecedented Zn species were recently achieved, including two‐coordinate Zn(II) organocations and thermally stable molecularly well‐defined Zn hydride species, opening the way to effective Zn‐mediated hydro‐silylation/‐boration catalysis of various unsaturated substrates under mild conditions. The potential of NHC−Zn species for the stabilization of unprecedented Zn species and use in various catalytic applications is only emerging and the vast array of readily available NHC structures should promote future developments of the field.

  • Innate promiscuity of the CYP706 family of P450 enzymes provides a suitable context for the evolution of dinitroaniline resistance in weed

    Fatemeh Abdollahi, Mohammad Taghi Alebrahim, Chheng Ngov, Etienne Lallemand, Younxiang Zheng, Claire Villette, Julie Zumsteg, François André, Nicolas Navrot, Danièle Werck-Reichhart, Laurence Miesch
    New Phytologist, In press, ⟨10.1111/nph.17126⟩ | Publiée le 1 janvier 2021
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    Increased metabolism is one of the main causes for evolution of herbicide resistance in weeds, a major challenge for sustainable food production. The molecular drivers of this evolution are poorly understood. We tested here the hypothesis that a suitable context for the emergence of herbicide resistance could be provided by plant enzymes with high innate promiscuity with regard to their natural substrates. A selection of yeast-expressed plant cytochrome P450 enzymes with well documented narrow to broad promiscuity when metabolizing natural substrates was tested for herbicide metabolism competence. The positive candidate was assayed for capacity to confer herbicide tolerance in Arabidopsis thaliana. Our data demonstrate that A. thaliana CYP706A3, with the most promiscuous activity on mono- and sesquiterpenes for flower defense, can also oxidize plant microtubule assembly inhibitors, dinitroanilines. Ectopic overexpression of CYP706A3 confers dinitroaniline resistance. We show, in addition, that the capacity to metabolize dinitroanilines is shared by other members of the CYP706 family from plants as diverse as eucalyptus and cedar. Supported by 3D modelling of CYP706A3, the properties of enzyme active site and substrate access channel are discussed together with the shared physicochemical properties of the natural and exogenous substrates to explain herbicide metabolism.

  • Bikini textile contact dermatitis: a Sherlockian approach revealing 2.4‐dichlorophenol as a potential textile contact allergen

    David Pesqué, Álvaro March‐rodriguez, Jakob Dahlin, Marléne Isaksson, Ramon M Pujol, Elena Gimenez-Arnau, Ana Giménez‐arnau
    Contact Dermatitis, In press, ⟨10.1111/cod.13946⟩ | Publiée le 1 janvier 2021
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    Background: Different textile constituents may act as allergens and/or irritants and provoke textile contact dermatitis (TCD). Objectives: To report a case of TCD caused by ethylene glycol monododecyl ether and 2.4-dichlorophenol present in a bikini. Methods: A woman presented with an eczematous, pruritic rash in the area of the straps and back. Patch testing was performed with the European baseline, textile, sunscreen and photo-patch series, the bikini “as is”, and ethanol and acetone extracts of the bikini. Thin-layer chromatography (TLC) of the extracts and gas chromatography-mass spectrometry (GC-MS) analysis were used to elucidate the culprit agents. Result: Positive reactions were found to the bikini “as is”, and to the ethanol and acetone extracts. Patch testing with TLC strips showed a strong reaction to particular fractions (3 and 4). GC-MS was performed to identify substances in each fraction, and those suspected to be skin sensitizers were patch tested. On day 4 (D4) positive reactions to ethylene glycol monododecyl ether (IR) and 2.4-dichlorophenol (++) were observed. Conclusion: A myriad of chemical compounds can be found in clothing. Ethylene glycol monododecyl ether and 2.4-dichlorophenol were identified as the potential culprits of this bikini TCD.

  • Substituent effects on the photophysical properties of 2,9‐substituted phenanthroline copper(I) complexes: a theoretical investigation

    Christophe Gourlaouen, Keiko Takano, Ai Hamano, Chantal Daniel
    ChemPhysChem, 2021, 22, pp.509-515. ⟨10.1002/cphc.202000868⟩ | Publiée le 1 janvier 2021
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    The electronic and nuclear structures of a series of [Cu(2,9‐X‐phen) 2 ] copper(I) complexes (phen = 1,10‐phenanthroline; X=H, F, Cl, Br, I, Me, CN) in their ground and excited states is investigated by means of density functional theory (DFT), time‐dependent (TD‐DFT) methods and Born‐Oppenheimer molecular dynamics. The Gibbs free energy profiles, associated to S 1 and T 1 electronic states, which connect the four degenerate minima induced by ligand flattening and symmetry breaking when exciting the molecule are calculated as well as transition state structures and related energy barriers. Three nuclear motions drive the photophysics, namely the coordination sphere asymmetric breathing, the well known flattening and the bending of the phen ligands. This theoretical study reveals the limit of the static picture based on potential energy surfaces minima and transition states for interpreting the luminescent and TADF properties of this class of molecules. Whereas only small asymmetric Cu‐N bonds breathing are involved in electronic delocalization over one or the other phen ligand, the three nuclear movements participate to the formation of the flat conformers. This leads to negligible energy barriers whatever the ligand X for the first process and significant ligand dependent energy barriers for the second one.

  • Synthesis and electrochemistry of nickel(II)porphyrins bearing external palladium(II) or platinum(II) complexes

    Hervé Dekkiche, Mary-Ambre Carvalho, Christophe Jeandon, Lydia Karmazin, Corinne Boudon, Laurent Ruhlmann, Romain Ruppert
    Journal of Porphyrins and Phthalocyanines, 2021, 25 (10-12), pp.1133 - 1142. ⟨10.1142/s1088424621501066⟩ | Publiée le 1 janvier 2021
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    The syntheses of nickel(II)porphyrins bearing palladium(II) or platinum(II) complexes at their periphery were performed. These new compounds were characterized by standard spectroscopic techniques and studied by electrochemistry. The electrochemical data were then compared with previously published data of porphyrin dimers linked by metal ions like palladium(II) or platinum(II). An X-ray structure of one of these species was obtained and confirmed the structure of this series of compounds.

  • Nanomechanical characterization of the synergism of antimicrobial peptides PGLa and magainin 2 for lipid membrane disruption

    Fabio Perissinotto, Sebastien Janel, Javier Lopez-Alonso, Vincent Dupres, Burkhard Bechinger, Frank Lafont, Lorena Redonda-Morata
    Biophysical Journal, 2021, 120 (3, Supplement 1), pp.191a. ⟨10.1016/j.bpj.2020.11.1318⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Antimicrobial peptides (AMPs) are amphiphilic molecules used by eukaryotic organisms as first defensive mechanism against infections. There is an increasing interest in the study of these peptides, considered promising alternatives to antibiotics for the treatment of multi-resistance pathogens. AMPs target the bacterial membrane leading to membrane lysis by pore formation and bilayer disruption. Here we studied PGLa and Magainin 2 (Mag2), which are known for a particular synergistic behavior in their antimicrobial activity. Although the molecular mechanism is not completely deciphered yet, lipid-mediated interactions are responsible for such synergism, directly correlated to a change in the peptide orientation into the membrane when both peptides are present. By means of atomic force microscopy (AFM), we investigated the effect of both individual peptides compared with their equimolar mixture on the structure, dynamics and nanomechanical properties of model lipid bilayers mimicking gram-negative bacterial cell membrane. Both individual peptides and the mixture led to a lateral expansion and a drastic thinning of the lipid bilayer, pointing out a deep structural reorganization of the membrane. AFM-based Quantitative nanomechanical mapping allowed us to investigate the membrane elastic constants and the resistance to failure. The mechanical rupture of the lipid bilayer by the AFM tip has been used extensively as a hallmark of its mechanical stability, usually by measuring the forces required to break the bilayer probed at different velocities. Interestingly, the elasticity of the membrane does not undergo significant changes upon the addition of the peptides. However, we observed a major increase in the breakthrough force, especially in the equimolar mixture of peptides. This particular nanomechanical behavior may indicate a complex synergistic mechanism between PGla and Mag2 to drive membrane disruption.

  • Room-Temperature Cu(II) Radical-Triggered Alkyne C–H Activation

    Jack Devonport, Lauren Sully, Athanassios Boudalis, Storm Hassell-Hart, Matthew Leech, Kevin Lam, Alaa Abdul-Sada, Graham Tizzard, Simon Coles, John Spencer, Alfredo Vargas, George Kostakis
    JACS Au, In press, ⟨10.1021/jacsau.1c00310⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    A dimeric Cu(II) complex [Cu(II)2L2(μ2-Cl)Cl] (1) built from an asymmetric tridentate ligand (2-(((2-aminocyclohexyl)imino)methyl)-4,6-di-tert-butylphenol) and weakly coordinating anions has been synthesized and structurally characterized. In dichloromethane solution, 1 exists in a monomeric [Cu(II)LCl] (1′) (85%)–dimeric (1) (15%) equilibrium, and cyclic voltammetry (CV) and electron paramagnetic resonance (EPR) studies indicate structural stability and redox retention. Addition of phenylacetylene to the CH2Cl2 solution populates 1′ and leads to the formation of a transient radical species. Theoretical studies support this notion and show that the radical initiates an alkyne C–H bond activation process via a four-membered ring (Cu(II)–O···H–Calkyne) intermediate. This unusual C–H activation method is applicable for the efficient synthesis of propargylamines, without additives, within 16 h, at low loadings and in noncoordinating solvents including late-stage functionalization of important bioactive molecules. Single-crystal X-ray diffraction studies, postcatalysis, confirmed the framework’s stability and showed that the metal center preserves its oxidation state. The scope and limitations of this unconventional protocol are discussed.

  • A combined DFT and experimental study into the optoelectronic and charge transport properties of ninhydrin-glycine Schiff base complexes for efficient LED applications

    Rihab Chouk, Chadlia Aguir, Manel Bergaoui, Jean-Pierre Djukic, Chaker Bouzidi, Mohamed Khalfaoui
    Optical and Quantum Electronics, 2021, 53, ⟨10.1007/s11082-021-02816-z⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    A combined theor. and exptl. study has been performed on four synthesized Schiff base complexes derived from ninhydrin-glycine ligand (NG) with Co(II), Zn(II), Al(III) and Fe(III) metal cations. The FT-IR spectra clearly showed that the complexes behave as tridentate monobasic ONO donor ligand. Furthermore, the energy levels of HOMO, LUMO levels and band gap were detd. using the D. Functional Theory (DFT). The exptl. and theor. optical investigation showed that the complexes have good absorption in visible region and blue emission with a max. emission wavelength located at 436 nm, 471 nm and 478 nm for Co-NG, Zn-NG and Al-NG, resp. Moreover, based on Marcus theories, we estd. the rate of electron and hole charge transfer. As a result, Al-NG complex has the better electron and hole transport than the other complexes with Ket = 4.10 x 1014 and Kht = 4.86 x 1014, resp. Finally, to predict the possibility of introducing the studied complexes in light emitting diode (LED) devices, the electron and hole injection barriers were estd. The found results are interesting which make the studied complexes potential candidates for LED application. [on SciFinder(R)]

  • Direct Synthesis of CF 2 H-Substituted 2-Amidofurans via Copper-Catalyzed Addition of Difluorinated Diazoacetone to Ynamides

    Yongxiang Zheng, Anna Perfetto, Davide Luise, Ilaria Ciofini, Laurence Miesch
    Organic Letters, 2021, 23 (14), pp.5528-5532. ⟨10.1021/acs.orglett.1c01876⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    The significance of molecules containing difluoromethyl groups is driven by their potential applications in pharmaceutical and agrochemical science. Methods for the incorporation of lightly fluorinated groups such as CF2H have been less well developed. Here we report the use of difluorinated diazoacetone as a practical reagent for the direct synthesis of CF2H-substituted 2-amidofurans through addition to ynamides. These newly designed difluorinated amidofurans were elaborated to create new nitrogen-containing frameworks that would be challenging to obtain otherwise

  • Convenient Access to Functionalized Non-Symmetrical Atropisomeric 4,4′-Bipyridines

    Emmanuel Aubert, Emmanuel Wenger, Paola Peluso, Victor Mamane
    Compounds, 2021, 1 (2), pp.58 - 74. ⟨10.3390/compounds1020006⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Non-symmetrical chiral 4,4′-bipyridines have recently found interest in organocatalysis and medicinal chemistry. In this regard, the development of efficient methods for their synthesis is highly desirable. Herein, a series of non-symmetrical atropisomeric polyhalogenated 4,4′-bipyridines were prepared and further functionalized by using cross-coupling reactions. The desymmetrization step is based on the N-oxidation of one of the two pyridine rings of the 4,4′-bipyridine skeleton. The main advantage of this methodology is the possible post-functionalization of the pyridine N-oxide, allowing selective introduction of chlorine, bromine or cyano groups in 2- and 2′-postions of the chiral atropisomeric 4,4′-bipyridines. The crystal packing in the solid state of some newly prepared derivatives was analyzed and revealed the importance of halogen bonds in intermolecular interactions

  • Iron Stearate Structures: An Original Tool for Nanoparticles Design

    Francis Perton, Geoffrey Cotin, Céline Kiefer, Jean-Marc Strub, Sarah Cianferani, Jean-Marc Greneche, Nathalie Parizel, Benoît Heinrich, Benoit Pichon, Damien Mertz, Sylvie Begin-Colin
    Inorganic Chemistry, 2021, 60 (16), pp.12445-12456. ⟨10.1021/acs.inorgchem.1c01689⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Iron carboxylates are widely used as iron precursors in the thermal decomposition process or considered as in situ formed intermediate precursors. Their molecular and three-dimensional (3D)-structural nature has been shown to affect the shape, size, and composition of the resulting iron oxide nanoparticles (NPs). Among carboxylate precursors, stearates are particularly attractive because of their higher stability to aging and hydration and they are used as additives in many applications. Despite the huge interest of iron stearates, very few studies aimed up to now at deciphering their full metal-ligand structures and the mechanisms allowing us to achieve in a controlled manner the bottom-up NP formation. In this work, we have thus investigated the molecular structure and composition of two iron stearate precursors, synthesized by introducing either two (FeSt2) or three (FeSt3) stearate (St) chains. Interestingly, both iron stearates consist of lamellar structures with planes of iron polynuclear complexes (polycations) separated with stearate chains in all-trans conformation. The iron content in polycations was found very different between both iron stearates. Their detailed characterizations indicate that FeSt2 is mainly composed of [Fe3-(μ3-O)St6·xH2O]Cl, with no (or few) free stearate, whereas FeSt3 is a mixture of mainly [Fe7(μ3-O(H))6(μ2-OH)xSt12–2x]St with some [Fe3(μ3-O)St6·xH2O]St and free stearic acid. The formation of bigger polynuclear complexes with FeSt3 was related to higher hydrolysis and condensation rates within the iron(III) chloride solution compared to the iron(II) chloride solution. These data suggested a nucleation mechanism based on the condensation of polycation radicals generated by the catalytic departure of two stearate chains from an iron polycation-based molecule.

  • Enhancement of photocurrent by incorporation of Preyssler type polyoxometalate protected nanoparticles in polyporphyrin films

    Zhaohui Huo, Yiming Liang, Yaokang Lu, Frederic Melin, Petra Hellwig, H Ibrahim, M Goldmann, Corinne Boudon, Vasilica-Adriana Badets, Pierre-Antoine Bonnefont, Laurent Ruhlmann
    Chemical Communications, 2021, 57 (12), pp.1482-1485. ⟨10.1039/d0cc06283a⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    The introduction of nanoparticles (MNPs) at the surface of cationic poly-porphyrin films, obtained by electrostatic interaction between the bis-porphyrin copolymer and the Preyssler type polyoxometalate P5W30@MNPs, enhances the photocurrent (up to 2.5-3 times greater as a function of the used nanoparticle).

  • Antimicrobial peptides: mechanism of action and lipid-mediated synergistic interactions within membranes

    Dennis Juhl, Elise Glattard, Christopher Aisenbrey, Burkhard Bechinger
    Faraday Discussions, 2021, 232, pp.419-434. ⟨10.1039/D0FD00041H⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Biophysical and structural studies of peptide–lipid interactions, peptide topology and dynamics have changed our view of how antimicrobial peptides insert and interact with membranes. Clearly, both peptides and lipids are highly dynamic, and change and mutually adapt their conformation, membrane penetration and detailed morphology on a local and a global level. As a consequence, peptides and lipids can form a wide variety of supramolecular assemblies in which the more hydrophobic sequences preferentially, but not exclusively, adopt transmembrane alignments and have the potential to form oligomeric structures similar to those suggested by the transmembrane helical bundle model. In contrast, charged amphipathic sequences tend to stay intercalated at the membrane interface. Although the membranes are soft and can adapt, at increasing peptide density they cause pronounced disruptions of the phospholipid fatty acyl packing. At even higher local or global concentrations the peptides cause transient membrane openings, rupture and ultimately lysis. Interestingly, mixtures of peptides such as magainin 2 and PGLa, which are stored and secreted naturally as a cocktail, exhibit considerably enhanced antimicrobial activities when investigated together in antimicrobial assays and also in pore forming experiments applied to biophysical model systems. Our most recent investigations reveal that these peptides do not form stable complexes but act by specific lipid-mediated interactions and the nanoscale properties of phospholipid bilayers

  • High thermal conductivity states and enhanced figure of merit in aligned polymer thermoelectric materials

    Thibault Degousée, Viktoriia Untilova, Vishnu Vijayakumar, Xinzhao Xu, Yiwei Sun, Matteo Palma, Martin Brinkmann, Laure Biniek, Oliver Fenwick
    Journal of Materials Chemistry A, 2021, 9 (29), pp.16065-16075. ⟨10.1039/D1TA03377H⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Control of morphology in polymer thermoelectric materials is critical to their performance. In this work we study highly aligned polymer thermoelectric materials prepared by mechanical rubbing. We observe a remarkable range of thermal conductivity states from <0.2 W m−1 K−1 to >1 W m−1 K−1 when comparing measurements made parallel and perpendicular to the chain alignment direction and in isotropic films. Nanomechanical analysis reveals that the high thermal conductivity films are stiffer, but this does not fully account for the increase in thermal conductivity. The underlying morphologies of the materials are studied using electron diffraction and Raman spectroscopy and correlated to the electronic and thermal transport states. Despite the discovery of high thermal conductivity states, mechanical rubbing results in a power factor enhancement along the rubbing direction that far outweighs the increase in thermal conductivity, resulting in a 25-fold improvement in the thermoelectric figure of merit, ZT, as compared to the isotropic doped films.

  • Observation and deconvolution of a unique EPR signal from two cocrystallized spin triangles

    Logesh Mathivathanan, Yiannis Sanakis, Raphael G Raptis, Philippe Turek, Athanassios K Boudalis
    Physical Chemistry Chemical Physics, 2021, 23 (26), pp.14415-14421. ⟨10.1039/D1CP01965A⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    A 16-line pattern has been theoretically predicted, but hitherto not reported, for the Electron Paramagnetic Resonance (EPR) spectrum of antiferromagnetically coupled CuII triangles experiencing isotropic exchange of isosceles magnetic symmetry. Now, the crystallization of such a triangular species and its X-ray structure determination in a polar space group, R3 (No. 146), has enabled its single crystal EPR study. Its detailed magnetic susceptibility, and X- and Q-band, powder and single crystal EPR spectroscopic study reveals the effect of molecular structure and of Dzyaloshinskii–Moriya interactions (DMI) on the g‖, g⊥ and A‖ parameters of the spectrum; DMI is considered for the first time in such a context. Moreover, careful analysis of the spectrum allows the deconvolution of two slightly different cocrystallized magnetic species.

  • Geological alteration of Precambrian steroids mimics early animal signatures

    Lennart M van Maldegem, Benjamin J Nettersheim, Arne Leider, Jochen J Brocks, Pierre Adam, Philippe Schaeffer, Christian Hallmann
    Nature Ecology & Evolution, 2021, 5, pp.169-173. ⟨10.1038/s41559-020-01336-5⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    The absence of unambiguous animal body fossils in rocks older than the late Ediacaran has rendered fossil lipids the most promising tracers of early organismic complexity. Yet much debate surrounds the various potential biological sources of putative metazoan steroids found in Precambrian rocks. Here we show that 26-methylated steranes—hydrocarbon structures currently attributed to the earliest animals—can form via geological alteration of common algal sterols, which carries important implications for paleo-ecological interpretations and inhibits the use of such unconvtional ‘sponge’ steranes for reconstructing early animal evolution.

  • Photocurrent Generation from Visible Light Irradiation of Covalent Polyoxometalate-Porphyrin Copolymers

    Zhaohui Huo, Yiming Liang, Shu Yang, Dejin Zang, Rana Farha, Michel Goldmann, Hualong Xu, Antoine Bonnefont, Edoardo Matricardi, Guillaume Izzet, Anna Proust, Laurent Ruhlmann
    Electrochimica Acta, 2021, 368, pp.137635. ⟨10.1016/j.electacta.2020.137635⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Four hybrid polyoxometalate–porphyrin copolymer films were obtained by the electrooxidation of zinc-β-octaethylporphyrin (ZnOEP) or 5,15-ditolylporphyrin (H2T2P) in the presence of organosilyl functionalized Keggin-type POMs TBA3[PW11Si2O40C26H16N2] (abbreviated Py-PW11Si2-Py) and Dawson-type POMs TBA6[P2W17Si2O62C26H16N2] (abbreviated Py-P2W17Si2-Py) bearing two remote pyridyl groups. The electropolymerization process of the four copolymers was monitored by EQCM. The obtained copolymers were characterized by UV/Vis spectroscopy, X-ray photoelectron spectroscopy, electrochemistry, and AFM. Their impedance properties (EIS) were studied and their photovoltaic performances were also investigated by photocurrent transient measurements under visible light irradiation. These studies showed a correlation between impedance and photovoltaic performances, the films based on Dawson type POMs and Zn porphyrins giving the best results. This last system displayed one of the best photocurrent efficiency for a reported POM photosensitized hybrid.

  • Self‐Assembled Carbon Superstructures Achieving Ultra‐Stable and Fast Proton‐Coupled Charge Storage Kinetics

    Ziyang Song, Ling Miao, Laurent Ruhlmann, Yaokang Lu, Dazhang Zhu, Liangchun Li, Lihua Gan, Mingxian Liu
    Advanced Materials, 2021, 33 (49), pp.2104148. ⟨10.1002/adma.202104148⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Designing ingenious and stable carbon nanostructures is critical but still challenging for use in energy storage devices with superior electrochemistry kinetics, durable capacitive activity, and high rate survivability. To pursue the objective, a simple self-assembly strategy is developed to access carbon superstructures built of nanoparticle embedded plates. The carbon precursors, 2,4,6-trichloro-1,3,5-triazine and 2,6-diaminoanthraquinone can form porous organic polymer with “protic salt”-typed rigid skeleton linked by −NH2+Cl−− “rivets”, which provides the cornerstone for hydrogen-bonding-guided self-assembly of the organic backbone to superstructures by π−π plane stacking. The ameliorative charge density distribution and decreased adsorption energy in as-fabricated carbon superstructures allow the high accessibility of the build-in protophilic sites and efficient ion diffusion with a low energy barrier. Such superstructures thus deliver ultra-stable charge storage and fast proton-coupled redox kinetics at the structural−chemical defects, contributing to unprecedented lifespan (1,000,000 cycles), high-rate capability (100 A g−1) for carbon-based supercapacitors, and an ultrahigh energy density (128 Wh kg−1) for Zn-ion hybrid supercapacitors. The self-assembled carbon superstructures significantly improve the all-round electrochemical performances, and hold great promise for efficient energy storage.

  • 1,3,4-Oxadiazole-functionalized α -amino-phosphonates as ligands for the ruthenium-catalyzed reduction of ketones

    Shaima Hkiri, Christophe Gourlaouen, Soufiane Touil, Ali Samarat, David Sémeril
    New Journal of Chemistry, 2021, 45 (25), pp.11327-11335. ⟨10.1039/d1nj01861b⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Three α-aminophosphonates, namely diethyl[(5-phenyl-1,3,4-oxadiazol-2-ylamino)(4-trifluoromethylphenyl) methyl]phosphonate (3a), diethyl[(5-phenyl-1,3,4-oxadiazol-2-ylamino)(2-methoxyphenyl)methyl]phosphonate (3b) and diethyl[(5-phenyl-1,3,4-oxadiazol-2-ylamino)(4-nitrophenyl)methyl]phosphonate (3c), were synthetized via the Pudovik-type reaction between diethyl phosphite and imines, obtained from 5-phenyl-1,2,4-oxadiazol-2-amine and aromatic aldehydes, under microwave irradiation. Compounds 3a–c underwent complexation with a ruthenium(II) precursor, selectively at the more basic nitrogen atom of the oxadiazole ring, leading to the corresponding ruthenium complexes 4a–c of the formula [RuCl2(L)(p-cymene)] (L = α-aminophosphonates 3a–c). Complexes 4a–c proved to be efficient catalysts for the transfer hydrogenation of ketones to alcohols. All new compounds were fully characterised by elemental analysis, infrared, mass and NMR spectroscopy. An X-ray structure of the α-aminophosphonate 3b was obtained and revealed the presence, in the solid state, of an infinite chain of 3b units supramolecularly interlinked. Two X-ray diffraction studies carried out on ruthenium complexes confirm the specific coordination of the electron-enricher nitrogen atom of the oxadiazole ring.

  • Insight into the Modes of Activation of Pyridinium and Bipyridinium Salts in Non‐Covalent Organocatalysis

    Robin Weiss, Tamara Golisano, Patrick Pale, Victor Mamane
    Advanced Synthesis and Catalysis, In press, ⟨10.1002/adsc.202100865⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    A series of pyridinium and bipyridinium salts were prepared and their catalytic properties were evaluated in the aza-Diels-Alder between imines and Danishefsky diene. Depending on the substituents of the pyridinium/bipyridinium rings and on the nature of the counter-anion, two mechanisms of activation were demonstrated. In case of non-substituted rings, the substrate is activated through charge transfer involving the aryl ring on the C-side of the imine. When halogen atoms were introduced on the catalysts, the activation mode switched to halogen bond involving the imine nitrogen lone pair. Moreover, alternative activation modes based on hydrogen bonding and radical cation were ruled out. This work allowed us to develop two families of catalysts whose potential was demonstrated in the cycloaddition of various imines with Danishefsky diene. The first family is composed of the simple methyl pyridinium triflate and dioctyl bipyridinium triflate. The former is active only with imines bearing a p-methoxyphenyl group on the C-side and the latter was found to be efficient with imines bearing different substituents on both the N-and C-sides of the imines. The second family is based on halogenated pyridinium salts which proved active with almost all considered imines.

  • A luminescent ATCUN peptide variant with enhanced properties for copper(II) sensing in biological media

    Enrico Falcone, Bertrand Vileno, Mai Hoang, Laurent Raibaut, Peter Faller
    Journal of Inorganic Biochemistry, 2021, 221, pp.111478. ⟨10.1016/j.jinorgbio.2021.111478⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    The measurement of labile CuII in biological samples is fundamental for understanding Cu metabolism and has been emerging as a promising diagnostic marker for Cu-related pathologies such as Wilson's and Alzheimer's diseases. The use of fluorescent chelators may be useful to circumvent separation steps employed by current methods. For this purpose, we recently designed a selective and suited-affinity turn-off luminescent probe based on a peptide bearing the CuII-binding Xxx-Zzz-His (Amino-Terminal CuII- and NiII-binding, ATCUN) motif and a TbIII-DOTA (1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid) complex. Here, we present an analogue probe bearing the ATCUN motif variant Xxx-His-His. This probe showed much faster response in biologically-relevant media and higher stability than the previous motif at low pH. These features could be beneficial to the measurement of dynamic CuII fluctuations and the application in slightly acidic media, such as urine.

  • Chiral Gold(III) Complexes: Synthesis, Structure, and Potential Applications

    Rémi Jouhannet, Samuel Dagorne, Aurélien Blanc, Pierre de Frémont
    Chemistry - A European Journal, 2021, 27 (36), pp.9218 - 9240. ⟨10.1002/chem.202100415⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Since the beginning of the 2000's, homogeneous gold catalysis has emerged as a powerful tool to promote the cyclization of unsaturated substrates with excellent regioselectivity allowing the synthesis of elaborated organic scaffolds. An important goal to achieve in gold catalysis is the possibility to induce enantioselective transformations by the assistance of chiral complexes. Unfortunately, the linear geometry of coordination for gold usually encountered in complexes at the + 1 oxidation states renders this goal very challenging. In consequence, the interest toward the synthesis of chiral gold(III) complexes is steadily growing. Indeed, the square planar geometry of the gold(III) cation appears more suitable to promote chiral induction. Beside catalysis, gold(III) complexes have also shown promising potential in the field of pharmacology. Herein, syntheses and applications of well-defined gold(III) complexes reported over the last fifteen years are summarized.

  • Electrochemical studies of 1-ferrocenylmethyl-3-methyl-imidazolium iodide and 1-(ferrocenylmethyl)-3-mesityl-imidazolium iodide: redox potential and substituent effects

    Neghmouche Nacer Salah, Rebiai Abdelkrim, Pierre de Fremont, Samuel Dagorne, Louafi Fadila
    Bulletin of the Chemical Society of Ethiopia, 2021, 34 (3), pp.605-612. ⟨10.4314/bcse.v34i3.15⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    The electrochemical behavior of 1-ferrocenylmethyl-3-(methyl)-imidazolium iodide (or mesityl) imidazolium was studied by cyclic voltammetry at glassy carbon electrode in midiums organic to determine the influences of electronic imidazolium group on the ferrocene. The experimental results indicated that the redox reaction was reversible. Mass transport towards the electrode is a simple diffusion process and the diffusion coefficient (D) for redox couple has been also calculated and we have evaluated the heterogeneous charge transfer rate constant (K0).

  • Enantioseparations of polyhalogenated 4,4’‐bipyridines on polysaccharide‐based chiral stationary phases and molecular dynamics simulations of selector–selectand interactions

    Roberto Dallocchio, Barbara Sechi, Alessandro Dessì, Bezhan Chankvetadze, Sergio Cossu, Victor Mamane, Robin Weiss, Patrick Pale, Paola Peluso
    Electrophoresis, In press, ⟨10.1002/elps.202100049⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    2’-(4-Pyridyl)- and 2’-(4-hydroxyphenyl)-TCIBPs (TCIBP = 3,3’,5,5’-tetrachloro-2-iodo-4,4’-bipyridyl) are chiral compounds that showed interesting inhibition activity against transthyretin fibrillation in vitro. We became interested in their enantioseparation since we noticed that the M-stereoisomer is more effective than the P-enantiomer. Based thereon, we recently reported the enantioseparation of 2’-substituted TCIBP derivatives with amylose-based chiral columns. Following this study, herein we describe the comparative enantioseparation of both 2’-(4-pyridyl)- and 2’-(4-hydroxyphenyl)-TCIBPs on four cellulose phenylcarbamate-based chiral columns aiming to explore the effect of the polymer backbone, as well as the nature and position of substituents on the side groups on the enantioseparability of these compounds. In the frame of this project, the impact of subtle variations of analyte and polysaccharide structures, and mobile phase (MP) polarity on retention and selectivity was evaluated. The effect of temperature on retention and selectivity was also considered, and overall thermodynamic parameters associated with the analyte adsorption onto the CSP surface were derived from van ’t Hoff plots. Interesting cases of enantiomer elution order (EEO) reversal were observed. In particular, the EEO was shown to be dependent on polysaccharide backbone, the elution sequence of the two analytes being P-M and M-P on cellulose and amylose tris(3,5-dimethylphenylcarbamate), respectively. In this regard, a theoretical investigation based on molecular dynamics (MD) simulations was performed by using amylose and cellulose tris(3,5-dimethylphenylcarbamate) nonamers as virtual models of the polysaccharide-based selectors. This exploration at the molecular level shed light on the origin of the enantiodiscrimination processes.

  • Mn2O3 oxide with bixbyite structure for the electrochemical oxygen reduction reaction in alkaline media: Highly active if properly manipulated

    Anna S. Ryabova, Kirill A. Dosaev, Antoine Bonnefont, Joke Hadermann, Natalya A. Arkharova, Anton S. Orekhov, Robert Paria Sena, Viktoriia Saveleva, Gwénaëlle Kerangueven, Evgeny V. Antipov, Elena Savinova, Galina A. Tsirlina
    Electrochimica Acta, 2021, 367, pp.137378. ⟨10.1016/j.electacta.2020.137378⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    We consider compositional and structural factors which can affect the activity of bixbyite α-Mn2O3 towards the oxygen reduction reaction (ORR) and the stability of this oxide in alkaline solution. We compare electrochemistry of undoped, Fe and Al-doped α-Mn2O3 with bixbyite structure and braunite Mn7SiO12 having bixbyite-related crystal structure, using the rotating disk electrode (RDE), the rotating ring-disk electrode (RRDE), and cyclic voltammetry (CV) techniques. All manganese oxides under study are stable in the potential range between the ORR onset and ca. 0.7 V vs. Reversible Hydrogen Electrode (RHE). It is found that any changes introduced in the bixbyite structure and/or composition of α-Mn2O3 lead to an activity drop in both the oxygen reduction and hydrogen peroxide reactions in this potential interval. For the hydrogen peroxide reduction reaction these modifications also result in a change in the nature of the rate-determining step. The obtained results confirm that due to its unique crystalline structure undoped α-Mn2O3 is the most ORR active (among currently available) Mn oxide catalyst and favor the assumption of the key role of the (111) surface of α-Mn2O3 in the very high activity of this material towards the ORR.

  • Gold(I)-catalyzed divergent and diastereoselective synthesis of azepines by ammoniumation/ring-expansion reactions

    Romain Pertschi, Solène Miaskiewicz, Nicolas Kern, Jean-Marc Weibel, Patrick Pale, Aurélien Blanc
    Chem Catalysis, 2021, 1 (1), pp.129-145. ⟨10.1016/j.checat.2021.02.004⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Azepines are fragments found in natural products possessing relevant biological activities. Our method provides access to multiple azepine derivatives from simple azetidine derivatives in the presence of a gold catalyst. Small variations on the starting material conduct to different reaction cascades whose mechanisms have been thoroughly studied to explain and control the observed selectivity. This journey led to the discovery of original azepine scaffolds along the way, whose biological activity remains to be studied.

  • NHC-stabilized Al(III) and Ga(III) cationic alkyls: Synthesis, structure and use in hydrosilylation catalysis

    Anaëlle Bolley, David Specklin, Samuel Dagorne
    Polyhedron, 2021, 194, pp.114956. ⟨10.1016/j.poly.2020.114956⟩ | Publiée le 1 janvier 2021
    Article dans une revue

    Cationic Al(III) and Ga(III) species supported by N-heterocyclic carbene (NHC) ligands, (IDipp)AlMe 2 (PhBr)] + ([1] + , IDipp = 1,3-bis(2,6-diisopropylphenyl)imidazolin-2ylidene) and (IDipp)GaMe 2 ] + ([2] +), were prepared and structurally characterized as B(C 6 F 5) 4 salts via ionization of the corresponding neutral precursors (IDipp)MMe 3 (M = Al, Ga) with [Ph 3 C][B(C 6 F 5) 4 ] in PhBr at room temperature. Both [1][B(C 6 F 5) 4 ] and [2][B(C 6 F 5) 4 ] salt were isolated in high yield and their solid state structures established through X-ray crystallographic studies. Cations [1] + and [2] + , which are rare examples of structurally characterized tris-organyl Al(III) and Ga(III) cations, stand as potent Lewis acids as experimentally estimated through the Gutmann-Beckett method. These cations were further exploited in hydrosilylation catalysis of alkynes, benzaldehyde and CO 2 using HSiEt 3 as an hydrosilane source. Hydrosilylation of 1-hexyne, 4-phenylbutyne and phenylacetylene led to the formation of the corresponding Z-selective products 3-5, respectively, while benzaldehyde was converted to PhCH 2 OSiEt 3 (6). Cations [1] + and [2] + also slowly catalyze CO 2 hydrosilylation with the selective formation of the methanol-equivalent MeOSiEt 3 .

  • Molecular Recognition by Chalcogen Bond: Selective Chargetransfer Crystal Formation of Dimethylnaphthalene with Selenadiazolotetracyanonaphthoquinodimethane

    Yusuke Ishigaki, Kota Asai, Henri-Pierre Jacquot de Rouville, Takuya Shimajiri, Valérie Heitz, Hiroshi Fujii-Shinomiya, Takanori Suzuki
    European Journal of Organic Chemistry, In press, ⟨10.1002/ejoc.202001554⟩ | Publiée le 1 janvier 2021
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    The title nonplanar electron acceptor (1) fused with a selenadiazole ring selectively forms a crystalline charge-transfer complex (CT crystal) with 2,6-dimethylnaphthalene (2,6-DMN). On the other hand, the sulfur analogue (2) has less recognition ability and forms CT crystals with both 2,6-and 2,7-DMN. X-ray analyses of 1, 2, and their CT crystals revealed that the Se ••• N chalcogen bond (ChB) in 1 is strong enough to determine the crystal packing with the formation of a cavity suitable for 2,6-DMN. On the contrary, ChB through S ••• N contact in 2 competes with other weak interactions such as a C-H ••• N hydrogen bond. The stronger ChB involving Se is the key for 1 to separate 2,6-DMN (>97 wt%) from a complex isomer mixture containing ca. 10 wt% each of 2,6and 2,7-DMN by a simple, efficient and straightforward mixingfiltration-heating process.

  • N‐Substituted Acridinium as a Multi‐Responsive Recognition Unit in Supramolecular Chemistry

    Henri-Pierre Jacquot de Rouville, Johnny Hu, Valérie Heitz
    ChemPlusChem, 2021, 86 (1), pp.110-129. ⟨10.1002/cplu.202000696⟩ | Publiée le 1 janvier 2021
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    The N-substituted acridinium motif is an electron-deficient unit with appealing multi-responsive properties which have been exploited in the field of supramolecular chemistry. This building block reversibly alters its shape, and chemical and optical properties in response to a chemical or redox signal. In this Review, we discuss selected examples where the switchable properties of 9-aryl-N-methyl-acridinium lead to actuators, multi-input and multi-output systems, host or guest systems, and to interlocked systems with controllable motion.

  • Organo-catalyzed/initiated ring opening co-polymerization of cyclic anhydrides and epoxides: an emerging story

    Dmytro Ryzhakov, Gaël Printz, Béatrice Jacques, Samir Messaoudi, Françoise Dumas, Samuel Dagorne, Franck Le Bideau
    Polymer Chemistry, 2021, 12 (20), pp.2932-2946. ⟨10.1039/d1py00020a⟩ | Publiée le 1 janvier 2021
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    This review deals with recent organo-catalyzed/initiated developments of co-polymerization of cyclic anhydrides and epoxides to access polyesters.

  • Accurate ground state potential of Cu 2 up to the dissociation limit by perturbation assisted double-resonant four-wave mixing

    P. Bornhauser, M. Beck, Q. Zhang, G. Knopp, Roberto Marquardt, Christophe Gourlaouen, P. P. Radi
    J Chem Phys, 2020, 153 (24), pp.244305. ⟨10.1063/5.0028908⟩ | Publiée le 28 décembre 2020
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    Perturbation facilitated double-resonant four-wave mixing is applied to access high-lying vibrational levels of the X 1Σg + (0g +) ground state of Cu2. Rotationally resolved transitions up to v″ = 102 are measured. The highest observed level is at 98% of the dissociation energy. The range and accuracy of previous measurements are significantly extended. By applying the near dissociation equation developed by Le Roy [R. J. Le Roy, J. Quant. Spectrosc. Radiat. Transfer 186, 197 (2017)], a dissociation energy of De = 16 270(7) hc cm-1 is determined, and an accurate potential energy function for the X 1Σg + (0g +) ground state is obtained. Molecular constants are determined from the measured transitions and by solving the radial Schrödinger equation using this function and are compared with results from earlier measurements. In addition, benchmark multi-reference configuration interaction computations are performed using the Douglas-Kroll-Hess Hamiltonian and the appropriate basis of augmented valence quadruple ζ type. Coupled-cluster single, double, and perturbative triple calculations were performed for comparison.

  • Allosteric Control of Naphthalene Diimide Encapsulation and Electron Transfer in Porphyrin Containers: Photophysical Studies and Molecular Dynamics Simulation

    Laura Zanetti‐polzi, Ryan Djemili, Stephanie Durot, Valérie Heitz, Isabella Daidone, Barbara Ventura
    Chemistry - A European Journal, 2020, 26 (72), pp.17514-17524. ⟨10.1002/chem.202003151⟩ | Publiée le 23 décembre 2020
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    The complexation processes of N,N’-dibutyl-1,4,5,8-naphthalene diimide (NDI) into two types of π-electron-rich molecular containers consisting of two Zn(II)-porphyrins connected by four flexible linkers of two different lengths, were characterized by means of absorption and emission spectroscopies and molecular dynamics simulation. Notably, the addition of NDI leads to a strong quenching of the fluorescence of both cages only when they are in an open conformation suitable for guest encapsulation, a situation triggered by silver(I) ions binding to the lateral triazoles. Molecular dynamics simulations confirm the fast binding of NDI, likely assisted by NDI-silver(I) interactions. Upon NDI complexation, the two porphyrin macrocycles get closer, with an optimized face to face orientation, suggesting an induced-fit mechanism through π–π interactions with the NDI aromatic cycle. Ultrafast transient absorption experiments allowed to identify the process of quenching of the Zn-porphyrin fluorescence as an efficient photoinduced electron transfer reaction between the cage porphyrin and the included NDI guest. The process occurs on fast and ultrafast time scales in the two complexes (1.5 ps and ≤300 fs) leading to a short-lived charge separated state (charge recombination lifetimes in the order of 30–40 ps). The combined computational and experimental approach used here is able to furnish a reliable model of the NDI-cage complexation mechanism and of the corresponding electron transfer reaction, attesting the allosteric control of both processes by the silver(I) ions.

  • A New Phenanthroline Ligand and the Spontaneous Resolution of its Homoleptic Copper(I) Complex

    Jordan Appleton, Vincent Silber, Lydia Karmazin, Corinne Bailly, Jean‐claude Chambron, Jean Weiss, Romain Ruppert
    European Journal of Organic Chemistry, 2020, 2020 (47), pp.7320-7326. ⟨10.1002/ejoc.202001126⟩ | Publiée le 20 décembre 2020
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    During the synthesis of 1,10-phenanthroline derivatives sterically hindered in the 2 and/or 9 positions, serendipity led to the discovery of a new substitution pattern on phenanthroline with good and reproducible yields. When toluene was used as a solvent and the aryl-lithium reagents generated with tBuLi, after a first substitution at the 2 position, a benzyl substituent was regioselectively introduced at the 7 position. It is proposed that the benzyllithium reagent is formed by reaction with the solvent and that the steric hindrance on the intermediates controls the nucleophilic addition. Among the complexes prepared (Pd(II), Cu(I)) with these new ligands, a chiral copper(I) complex exhibits spontaneous resolution in the solid state.

  • Virtually Transparent TiO 2 /Polyelectrolyte Thin Multilayer Films as High Efficiency Nanoporous Photocatalytic Coatings for Breaking Down Formic Acid and for Escherichia Coli Removal

    Marvin Motay, David Martel, Bertrand Vileno, Charline Soraru, Lydie Ploux, Maria Guadalupe Méndez-Medrano, Christophe Colbeau-Justin, Gero Decher, Nicolas Keller
    ACS Applied Materials & Interfaces, 2020, 12 (50), pp.55766-55781. ⟨10.1021/acsami.0c13545⟩ | Publiée le 16 décembre 2020
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    Virtually transparent photocatalytic multilayer films composed of TiO2 nanoparticles and polyelectrolytes were built on model surfaces using layer-by-layer assembly and investigated as photocatalytic nanoporous coatings. Formic acid (HCOOH) and Escherichia coli were used as models for the degradation of gaseous pollutants and for studying antibacterial properties. Positively charged TiO2 nanoparticles were coassembled with negatively charged poly(sodium 4-styrenesulfonate) (NaPSS) which leads to highly transparent nanoscale coatings in which the content of TiO2 particles is controlled mainly by the number of deposition cycles and the enhanced translucency with respect to titania powders is likely due to the presence of the polyelectrolytes in the interstitial space between the particles. Build-up and structural properties of the films were determined by ellipsometry, quartz crystal microbalance (QCM-D, with dissipation monitoring), and UV–vis spectrophotometry in transmission and scanning electron microscopy. Complementary photophysical and activity tests of (PSS/TiO2)n multilayer films were performed in the gas-phase under UV-A light and revealed a peculiar dependence on the number of layer pairs (LPs), corresponding to a clear deviation from the usual observations in photocatalysis with increasing TiO2 amounts. Most notably, a single LP film showed a strongly enhanced HCOOH mineralization and outperformed films with a higher number of LPs, with respect to the quantity of TiO2 catalyst present in the films. It is believed that the high quantum yield (8.1%) of a coating consisting of a single TiO2 layer which is 6–7 times higher than that of a 6–10 LP film could be due to the optimum accessibility of the TiO2 crystallites toward both HCOOH and water molecules. In thicker films, while no detrimental light screening was observed with increasing the number of LPs, diffusion phenomena could cap the efficiency of the access of the pollutant and water to the catalytic surface. Unlike for HCOOH mineralization, three PSS/TiO2 LPs were required for observing a maximum antibacterial activity of the nanocomposite coatings. This is likely due to the fact that micrometer-sized E. coli bacteria do not enter into the interstitial space between the TiO2 particles and require a different surface morphology with respect to the number of active contact points for optimum degradation.

  • New approaches to study excited states in density functional theory: general discussion

    Jan Gerit Brandenburg, Kieron Burke, Emmanuel Fromager, Matteo Gatti, Sara Giarrusso, Nikitas Gidopoulos, Paola Gori-Giorgi, Duncan Gowland, Trygve Helgaker, Matthew Hodgson, Lionel Lacombe, Gianluca Levi, Pierre-Francois Loos, Neepa Maitra, Eduardo Maurina Morais, Nisha Mehta, Filippo Monti, Manasi Mulay, Katarzyna Pernal, Lucia Reining, Pina Romaniello, Matthew Ryder, Andreas Savin, Dumitru Sirbu, Andrew Teale, Alex Thom, Donald Truhlar, Jack Wetherell, Weitao Yang
    Faraday Discussions, 2020, 224 (1-2), pp.483-508. ⟨10.1039/D0FD90026E⟩ | Publiée le 4 décembre 2020
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  • New density-functional approximations and beyond: general discussion

    Jan Gerit Brandenburg, Kieron Burke, Antonio Cancio, Jannis Erhard, Emmanuel Fromager, Abhisek Ghosal, Nikitas Gidopoulos, Paola Gori-Giorgi, Trygve Helgaker, Ben Hourahine, Christoph R. Jacob, Derk Kooi, Neepa Maitra, Manasi R. Mulay, Katarzyna Pernal, Aurora Pribram-Jones, Lucia Reining, Pina Romaniello, Matthew R. Ryder, Andreas Savin, Chris-Kriton Skylaris, Andrew M. Teale, David Tozer, Donald G. Truhlar, Weitao Yang
    Faraday Discussions, 2020, 224, pp.166-200. ⟨10.1039/D0FD90023K⟩ | Publiée le 4 décembre 2020
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  • Weight Dependence of Local Exchange-Correlation Functionals in Ensemble Density-Functional Theory: Double Excitations in Two-Electron Systems

    Clotilde Marut, Bruno Senjean, Emmanuel Fromager, Pierre-François Loos
    Faraday Discussions, 2020, 224, pp.402-423. ⟨10.1039/D0FD00059K⟩ | Publiée le 1 décembre 2020
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    Gross--Oliveira--Kohn (GOK) ensemble density-functional theory (GOK-DFT) is a time-\textit{independent} extension of density-functional theory (DFT) which allows to compute excited-state energies via the derivatives of the ensemble energy with respect to the ensemble weights. Contrary to the time-dependent version of DFT (TD-DFT), double excitations can be easily computed within GOK-DFT. However, to take full advantage of this formalism, one must have access to a \textit{weight-dependent} exchange-correlation functional in order to model the infamous ensemble derivative contribution to the excitation energies. In the present article, we discuss the construction of first-rung (i.e., local) weight-dependent exchange-correlation density-functional approximations for two-electron atomic and molecular systems (He and H$_2$) specifically designed for the computation of double excitations within GOK-DFT. In the spirit of optimally-tuned range-separated hybrid functionals, a two-step system-dependent procedure is proposed to obtain accurate energies associated with double excitations.

  • A flexible bis‐Co(III) porphyrin cage as a bimetallic catalyst for the conversion of CO 2 and epoxides into cyclic carbonates

    Laëtitia Schoepff, Laure Monnereau, Stephanie Durot, Sébastien Jenni, Christophe Gourlaouen, Valérie Heitz
    ChemCatChem, 2020, 12 (22), pp.5826-5833. ⟨10.1002/cctc.202001176⟩ | Publiée le 19 novembre 2020
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    A molecular cage consisting of two free-base porphyrins connected by four flexible linkers was metalated with Co(III) to afford in good yield a bimetallic catalyst. The catalytic activity of the bis-Co(III) porphyrin molecular cage (CoCl)2-1 was studied for the formation of cyclic carbonates from CO2 and propylene oxide (PO) or styrene oxide (SO) with pyridine as cocatalyst. Various reaction parameters such as the molar ratio of the catalyst and the co-catalyst, the time of reaction, the temperature and CO2 pressure were investigated. The molecular cage was shown to be a catalyst of high selectivity for the studied reactions and much more efficient to convert the epoxides to the corresponding cyclic carbonates than the monomeric Co(III)Cl meso-tetraphenylporphyrin (CoCl-TPP) model. When quantitative conversion of PO into propylene carbonate (PC) was reached (0.1 mol% catalyst, 1.2 mol% pyridine, 120 °C, 30 bar of CO2) only 23 % of PC was obtained with CoCl-TPP (0.2 mol%). This enhanced catalytic activity is attributed to the synergistic effect of the two metal sites incorporated in the framework of the molecular cage.

  • Cu(II) coordination polymer bearing diazenyl-benzoic ligand

    Souheyla Chetioui, Amel Djedouani, Zineb Fellahi, Jean-Pierre Djukic, Christian Bochet, Abdelkader Zarrouk, Ismail Warad
    Journal of Molecular Structure, 2020, 1229, ⟨10.1016/j.molstruc.2020.129604⟩ | Publiée le 6 novembre 2020
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    New binuclear copper(II) complex [Cu2L2] zig-zag coordination polymer (CCP) have been synthesized via one-pot copper(II) acetate/(E)-2-((2-hydroxynaphthalen-1-yl)diazenyl)benzoic dye through an in situ aqua doubly deprotonated ligand substitution reaction. The coordination polymer complex was characterized by spectroscopic and CHN-elemental anal. The crystal structure has been specified by the XRD-method exhibiting that the Cu(II) center geometry is with five-coordinated distorted tetragonal pyramidal. The desired CCP structure chains are connected into a 2D-Supramol. assembly via one C-H. O H-bond and enhanced by a π-π stacking interactions. These interconnections strengthened the lattice of CCP that originated the formation of super thermal CCP complexes. The fundamental vibrational wavenumbers and electron transfer in the free ligand are combined with the complex before and after coordination to demonstrate the spectral behavior of L-2 in the desired zig-zag CCP. The 2D-fingerprint (2D-FP) and Hirshfeld surface anal. (HSA) computations were served to prove the 2D-network packed crystal lattice interactions. [on SciFinder(R)]

  • Revealing the morphology and the magnetic properties of single buried cobalt-ZnTPP hybrid interfaces by ferromagnetic nuclear resonance spectroscopy

    Garen Avedissian, Jacek Arabski, Jennifer A Wytko, Jean Weiss, Christian Meny
    Physical Review B, 2020, 102 (18), ⟨10.1103/PhysRevB.102.184114⟩ | Publiée le 1 novembre 2020
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    The deeply buried, yet most important part of any spintronic device is the interface. This is even more interesting and much more complex when soft, light materials like organic molecules are in contact with an inorganic metallic electrode. Hence, exceptional care is required to better understand the phenomena driven by this type of organic/inorganic interfaces. To this end, ferromagnetic nuclear resonance (FNR) spectroscopy studies were performed to investigate the morphology and the magnetic properties of the hybrid organic-inorganic interfaces when zinc tetra-phenyl porphyrin (ZnTPP) molecules are at the vicinity of ferromagnetic metallic cobalt (Co) layers. The FNR experimental results show that when ZnTPP is deposited on top of Co the resulting interface is smoother and sharper compared to the more extended interface obtained when Co is deposited on top of ZnTPP. The shape of the spectra suggests that no chemical bonds take place between the interfacial Co atoms and the ZnTPP molecules and that interactions at the interfaces are governed by weak van der Waals forces. Finally, FNR also showed that the magnetic anisotropy at the Co-ZnTPP hybrid interfaces is reduced compared to the magnetic anisotropy of the Co atoms inside the Co films.

  • N ‐centered ensemble density‐functional theory for open systems

    Bruno Senjean, Emmanuel Fromager
    International Journal of Quantum Chemistry, 2020, 120 (21), ⟨10.1002/qua.26190⟩ | Publiée le 1 novembre 2020
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    Two (so-called left and right) variants of N-centered ensemble density-functional theory (DFT) [Senjean and Fromager, Phys. Rev. A 98, 022513 (2018)] are presented. Unlike the original formulation of the theory, these variants allow for the description of systems with a fractional electron number. While conventional DFT for open systems uses only the true electron density as basic variable, left/right N-centered ensemble DFT relies instead on (i) a fictitious ensemble density that integrates to a central (integral) number N of electrons, and (ii) a grand canonical ensemble weight α which is equal to the deviation of the true electron number from N. Within such a formalism, the infamous derivative discontinuity that appears when crossing an integral number of electrons is described exactly through the dependence in α of the left and right N-centered ensemble Hartree-exchange-correlation density functionals. Incorporating N-centered ensembles into existing density-functional embedding theories is expected to pave the way towards the in-principle-exact description of an open fragment by means of a pure-state N-electron many-body wavefunction. Work is currently in progress in this direction

  • Disubstituted Ferrocenyl Iodo- and Chalcogenoalkynes as Chiral Halogen and Chalcogen Bond Donors

    Victor Mamane, Paola Peluso, Emmanuel Aubert, Robin Weiss, Emmanuel Wenger, Sergio Cossu, Patrick Pale
    Organometallics, 2020, ⟨10.1021/acs.organomet.0c00633⟩ | Publiée le 28 octobre 2020
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    Asymmetric catalysis based on halogen and chalcogen bonds (XB and ChB) is in its infancy and the search for new chiral XB and ChB donors represents a crucial step towards its development. In this context, we designed and prepared new motifs containing three key substructures, namely regions of electron charge density depletion centred on iodine and chalcogen atoms, the ethynyl functionality and the planar chiral ferrocenyl platform. Nine ferrocenyl iodoalkynes were prepared as pure enantiomers by asymmetric synthesis. The XB donor property of racemic ferrocenyl iodoalkynes was demonstrated in solution in two benchmark reactions: the Ritter reaction and the benzoxazole synthesis from thioamides. In contrast, the ferrocenyl chalcogenoalkynes were far less active in these reactions. The potential of racemic and enantiopure ferrocenyl iodoalkynes as XB donors were also confirmed by X-ray diffraction analysis observing I···C contacts between the electropositive σ-hole of the iodine atom and electron rich π clouds for all crystal structures studied in the solid state.

  • Mesoporous TiO 2 anatase films for enhanced photocatalytic activity under UV and visible light

    Olga Ishchenko, Guillaume Lamblin, Jérôme Guillot, Infante Ingrid C., Maël Guennou, Noureddine Adjeroud, Ioana Fechete, Francois Garin, Philippe Turek, Damien Lenoble
    RSC Advances, 2020, 10 (63), pp.38233-38243. ⟨10.1039/d0ra06455f⟩ | Publiée le 16 octobre 2020
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    films with enhanced photocatalytic activity in both UV and visible wavelength ranges were developed through a non-conventional atomic layer deposition (ALD) process at room temperature. Deposition at such a low temperature promotes the accumulation of by-products in the amorphous TiO 2 films, caused by the incomplete hydrolysis of the TiCl 4 precursor. The additional thermal annealing induces the fast recrystallisation of amorphous films, as well as an in situ acidic treatment of TiO 2. The interplay between the deposition parameters, such as purge time, the amount of structural defects introduced and the enhancement of the photocatalytic properties from different mesoporous films clearly shows that our easily upscalable non-conventional ALD process is of great industrial interest for environmental remediation and other photocatalytic applications, such as hydrogen production.

  • Ligand exchange processes between molybdenum and zinc additives in lubricants: evidence from NMR ( 1 H, 13 C, 31 P) and HPLC-MS analysis

    Yu Min Kiw, Philippe Schaeffer, Pierre Adam, Benoît Thiébaut, Chantal Boyer, Géraldine Papin
    RSC Advances, 2020, 10 (62), pp.37962-37973. ⟨10.1039/D0RA07329F⟩ | Publiée le 14 octobre 2020
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    The tribological performances of engine oils have been shown to be enhanced by the synergistic interactions between Mo dithiocarbamates (Mo(DTC)2) with other additives, and notably Zn dithiophosphates (Zn(DTP)2). Being two key components in formulated lubricants, a detailed understanding of the mechanisms involved between these two types of additives is needed to develop engine oils with enhanced friction reduction performances, and improved fuel economy. In this context, we report here the investigation at the molecular level of the interactions between Mo and Zn complexes with DTC and DTP ligands using laboratory experiments. Our analytical approach comprised NMR spectroscopy (1H, 13C, 31P) allowing direct investigation of both homoleptic and heteroleptic Mo and Zn complexes as well as a specifically-developed HPLC-MS method for the investigation of the different DTC species formed during lubricant ageing experiments. The results showed that ligand exchange reactions between Mo(DTP)2 and Zn(DTC)2 complexes strongly favor the migration of the DTC ligands from Zn to Mo, illustrating the higher affinity of Mo for DTC ligands. In the case of binary mixtures involving Mo(DTC)2 and Zn(DTP)2 – a combination of additives frequently used in formulated lubricants – the formation of mixed complexes (Mo(DTC)(DTP)) resulting from ligand exchange reactions could be directly evidenced for the first time by the analytical methods used. These species could account, at least to some extent, for the synergistic effect of Mo(DTC)2 and Zn(DTP)2 on the friction reducing properties of engine oils. However, they were formed in significantly lower proportions than those previously reported in the literature using indirect methods

  • Exploring the Limits of π‐Acid Catalysis Using Strongly Electrophilic Main Group Metal Complexes: The Case of Zinc and Aluminium

    Jiaxin Tian, Yan Chen, Marie Vayer, Alexandre Djurovic, Régis Guillot, Refka Guermazi, Samuel Dagorne, Christophe Bour, Vincent Gandon
    Chemistry - A European Journal, 2020, 26 (56), pp.12831-12838. ⟨10.1002/chem.202001376⟩ | Publiée le 6 octobre 2020
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    The catalytic activity of cationic NHC-Zn(II) and NHC-Al(III) complexes in reactions that require the electrophilic activation of soft CC  bonds has been studied. The former proved able to act as a soft -Lewis acid in a variety of transformations. The benefit of the bulky IPr NHC ligand was demonstrated by comparison with simple ZnX2 salts. The tested NHC-Al(III) catalyst is not able to activate CC  bonds but simple AlX2 + ions were found potent in some cases.

  • Factors Impacting σ- and π-Hole Regions as Revealed by the Electrostatic Potential and Its Source Function Reconstruction: The Case of 4,4′-Bipyridine Derivatives

    Carlo Gatti, Alessandro Dessì, Roberto Dallocchio, Victor Mamane, Sergio Cossu, Robin Weiss, Patrick Pale, Emmanuel Aubert, Paola Peluso
    Molecules, 2020, 25 (19), pp.4409. ⟨10.3390/molecules25194409⟩ | Publiée le 1 octobre 2020
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    Positive electrostatic potential (V) values are often associated with σ-and π-holes, regions of lower electron density which can interact with electron-rich sites to form noncovalent interactions. Factors impacting σ-and π-holes may thus be monitored in terms of the shape and values of the resulting V. Further precious insights into such factors are obtained through a rigorous decomposition of the V values in atomic or atomic group contributions, a task here achieved by extending the Bader-Gatti source function (SF) for the electron density to V. In this article, this general methodology is applied to a series of 4,4-bipyridine derivatives containing atoms from Groups VI (S, Se) and VII (Cl, Br), and the pentafluorophenyl group acting as a π-hole. As these molecules are characterized by a certain degree of conformational freedom due to the possibility of rotation around the two C-Ch bonds, from two to four conformational motifs could be identified for each structure through conformational search. On this basis, the impact of chemical and conformational features on σ-and π-hole regions could be systematically evaluated by computing the V values on electron density isosurfaces (V S) and by comparing and dissecting in atomic/atomic group contributions the V S maxima (V S,max) values calculated for different molecular patterns. The results of this study confirm that both chemical and conformational features may seriously impact σ-and π-hole regions and provide a clear analysis and a rationale of why and how this influence is realized. Hence, the proposed methodology might offer precious clues for designing changes in the σ-and π-hole regions, aimed at affecting their potential involvement in noncovalent interactions in a desired way.

  • Origin of ferromagnetism and magnetic anisotropy in a family of copper(II) triangles

    Logesh Mathivatanan, Guillaume Rogez, Nadia Ben Amor, Vincent Robert, Raphael G Raptis, Athanassios K Boudalis
    Chemistry - A European Journal, 2020, 26 (56), pp.12769-12784. ⟨10.1002/chem.202001028⟩ | Publiée le 1 octobre 2020
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    Previously reported ferromagnetic triangles (N n Bu 4) 2 [Cu 3 (μ 3-Cl) 2 (μ-4-NO 2-pz) 3 Cl 3 ] (1), (PPN) 2 [Cu 3 (μ 3-Cl) 2 (μ-pz) 3 Cl 3 ] (2), (bmim) 2 [Cu 3 (μ 3-Cl) 2 (μ-pz) 3 Cl 3 ] (3) and newly reported (PPh 4) 2 [Cu 3 (μ 3-Cl) 2 (μ-4-Ph-pz) 3 Cl 3 ] (4) were studied by magnetic susceptometry, Electron Paramagnetic Resonance (EPR) spectroscopy and ab initio calculations to assess the origins of their ferromagnetism and of the magnetic anisotropy of their ground S = 3/2 state (PPN + = bis(triphenylphosphine)iminium, bmim + = 1-butyl-3-methylbenzimidazolium). Ab initio studies revealed the 2 d z character of the magnetic orbitals of the compressed trigonal bipyramidal copper(II) ions. Ferromagnetic interactions were attributed to weak orbital overlap via the pyrazolate bridges. From the wavefunctions expansions, the ratios of the magnetic couplings was determined, which was indeterminate by magnetic susceptometry. Single-crystal EPR studies of 1 were carried out to extend the spin Hamiltonian with terms which induce zero-field splitting (zfs), namely dipolar interactions, anisotropic exchange and Dzyaloshinskii-Moriya interactions (DMI). The data were treated through both a giant-spin model and through a multispin exchange-coupled model. The latter indicated that ~62% of the zfs is due to anisotropic and ~38% due to dipolar interactions. The powder EPR data of all complexes were fitted to a simplified form of the multispin model and the anisotropic and dipolar contributions to the ground state zfs were estimated. 2

  • Carbon hydrangeas with typical ionic liquid matched pores for advanced supercapacitors

    Ziyang Song, Hui Duan, Ling Miao, Laurent Ruhlmann, Yaokang Lu, Wei Xiong, Dazhang Zhu, Liangchun Li, Lihua Gan, Mingxian Liu
    Carbon, 2020, 168, pp.499-507. ⟨10.1016/j.carbon.2020.07.004⟩ | Publiée le 1 octobre 2020
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    Pore–ion size matching between carbon electrodes and electrolytes is crucial for superior energy storage. However, it remains a great challenge to engineer carbons with perfectly compatible pore dimension for desired electrolytes. Herein we design a simple synthetic route to carbon hydrangeas integrated with unique geometry, high surface areas, N/O doping, and more importantly, well-controlled pore structure. The narrow primary subnanopores of 0.80 nm are exactly matched the cation sizes (EMIM+, 0.76 nm) of ionic liquid electrolytes, 1-ethyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide (EMIM.TFSI) and 1-ethyl-3-methylimidazolium tetrafluoroborate (EMIM.BF4). Besides, the secondary pores of 0.50 nm are accessible for the smaller BF4− anions (0.48 nm) relative to TFSI− (0.79 nm), giving enhanced ion diffusion/adsorption kinetics. The fabricated solid-state supercapacitor based on EMIM.BF4 gel electrolyte achieves a record energy density of 101.2 Wh kg−1, with 29.2% enhancement against the use of EMIM.TFSI. This study presents a break-through to develop functionalized carbons with narrow and perfectly ion-comparable pore architecture, moving toward advanced energy storage systems.

  • The Reversible Non-covalent Aggregation Into Fibers of PGLa and Magainin 2 Preserves Their Antimicrobial Activity and Synergism

    Dennis Wilkens Juhl, Elise Glattard, Morane Lointier, Panos Bampilis, Burkhard Bechinger
    Frontiers in Cellular and Infection Microbiology, 2020, 10, ⟨10.3389/fcimb.2020.526459⟩ | Publiée le 30 septembre 2020
    Article dans une revue

    Magainin 2 and PGLa are antimicrobial peptides found together in frog skin secretions.When added as a mixture they show an order of magnitude increase in antibacterialactivity and in model membrane permeation assays. Here we demonstrate thatboth peptides can form fibers with beta-sheet/turn signature in ATR-FTIR- andCD-spectroscopic analyses, but with different morphologies in EM images. Whereas,fiber formation results in acute reduction of the antimicrobial activity of the individualpeptides, the synergistic enhancement of activity remainsfor the equimolar mixture ofPGLa and magainin 2 also after fibril formation. The biological significance and potentialapplications of such supramolecular aggregates are discussed.

  • Probing the Growth of Organic Molecular Films Embedded between Cobalt and Iron Electrodes: Ferromagnetic Nuclear Resonance Approach

    Garen Avedissian, Jacek Arabski, Jennifer Wytko, Jean Weiss, Christian Meny
    Advanced Functional Materials, 2020, ⟨10.1002/adfm.202005605⟩ | Publiée le 15 août 2020
    Article dans une revue

    Physical properties of magnetic nanostructures and devices strongly depend on the morphological characteristics of their various components. This is especially true and becomes particularly complex in hybrid nanostructures, where soft organic molecules are at the vicinity of ferromagnetic metallic films. The supramolecular architecture of molecular films embedded between iron (Fe) and cobalt (Co) layers, has been investigated by ferromagnetic nuclear resonance (FNR). In such sample architecture, the presence of pin holes in the organic layers is detected by FNR contributions in a specific spectral range. The methodology that has been developed allows probing the continuity and packing of zinc tetra-phenyl porphyrin (ZnTPP) molecular films between the Co and Fe films. The experimental results suggest that, regardless of the nature of the ferromagnetic under-layer, at least 15 monolayers of ZnTPP are necessary to form continuous and pin-hole free molecular films. In addition, quantitative analyses show that ZnTPP layers exhibit distinct morphologies that are dependent on the nature of the ferromagnetic metallic under-layer.

  • Tertiary Enamide-Promoted Diastereoselective Domino: N-Acyliminium Ion Trapping and Nazarov Cyclization

    Yongxiang Zheng, Lucile Andna, Olivia Bistri, Laurence Miesch
    Organic Letters, 2020, ⟨10.1021/acs.orglett.0c02251⟩ | Publiée le 13 août 2020
    Article dans une revue

    N-Acyliminium ions generated from enamidyl vinyl ketones provided cyclopentenoid-fused diazepines diastereose-lectively using BF3•Et2O in one pot through a domino N-acyliminium ion trapping/Nazarov reaction, simultaneously generating three new stereogenic centers. The particular structural design of the cross-conjugated dienone dictates the torquoselectivity observed in this polarized Nazarov reaction. Various N-bridgehead polycyclic scaffolds of putative pharmacological interest were obtained. Cyclic voltammetry was used to support the preferred reaction sequence within this domino reaction.

  • An Efficient Electrochromic Supercapacitor Based on Solution‐Processable Nanoporous Poly{tris[4‐(3,4‐ethylenedioxythiophene)phenyl]amine}

    Yaokang Lv, Xing Yang, Weishi Du, Peihua Ma, Hu Wang, Antoine Bonnefont, Dominic S. Wright, Laurent Ruhlmann, Cheng Zhang
    ChemSusChem, 2020, 13 (15), pp.3729-3729. ⟨10.1002/cssc.202001713⟩ | Publiée le 7 août 2020
    Article dans une revue

    A new green-synthetic route to the tris[4-(3,4-ethylenedioxythiophene)phenyl]amine (TEPA) monomer has been developed and the molecular structure of TEPA determined by a single-crystal X-ray study for the first time. Solution-processable nanoporous poly(tris[4-(3,4-ethylenedioxythiophene)phenyl]amine) (PTEPA) was prepared via chemical-oxidative polymerization in a microemulsion. Based on the distorted structure of TEPA found in the solid-state, we speculate that dendritic PTEPA has a distorted three-dimensional conformation with multiple twisted channels and pores which are narrowed and blocked by the bifurcation and distortion of PTEPA, which is consistent with the observed hierarchical pore structure. As a cathode material, PTEPA exhibits a discharge capacity of 89.5 mAh/g in the initial cycle with a very sloping two-stage discharge curve and relatively stable cycling performance. Beyond excellent energy storage properties, PTEPA also shows relatively good electrochromic performance. On this basis, an efficient all-solid-state electrochromic supercapacitor (ECSC) with good electrochromic performance and high energy storage capacity (13.3 mF cm−2) was assembled based on PTEPA and nanoporous graphene films. During the charging and discharging processes, the color of the ECSC changes between yellow-green and steel-blue. Thus, the energy storage level of the ECSC can be monitored by the corresponding color changes. The fabricated ECSC may have practical applications, for example, in self-powered electrochromic smart windows.

  • Adsorptive removal of gaseous formaldehyde at realistic concentrations

    Irene Lara-Ibeas, Cristina Megias-Sayago, Benoît Louis, Stéphane Le Calvé
    Journal of Environmental Chemical Engineering, 2020, 8 (4), pp.103986. ⟨10.1016/j.jece.2020.103986⟩ | Publiée le 1 août 2020
    Article dans une revue

    Due to analytical reasons, adsorption capacity is often determined at very high concentrations which is not representative of a real environment. The aim of this work is to provide experimental data of formaldehyde adsorption capacity at realistic levels (~ 164 ppb) thanks to a near real-time powerful formaldehyde analyser recently developed in our laboratory. Gaseous formaldehyde breakthrough

  • Membrane pore-formation correlates with the hydrophilic angle of histidine-rich amphipathic peptides with multiple biological activities

    Morane Lointier, Christopher Aisenbrey, Arnaud Marquette, Jia Hao Tan, Antoine Kichler, Burkhard Bechinger
    Biochimica et Biophysica Acta:Biomembranes, 2020, 1862 (8), pp.183212. ⟨10.1016/j.bbamem.2020.183212⟩ | Publiée le 1 août 2020
    Article dans une revue

    The LAH4 family of amphipathic peptides exhibits pronounced antimicrobial, cell penetrating and nucleic acid transfection activities. Furthermore, variants were designed with potent lentiviral transduction enhancement. When viewed along a helical wheel the four histidines are arranged to form an amphipathic structure. In order to optimize some of these biological activities the number of leucine and alanine residues exposed to the hydrophilic surface was systematically varied which resulted in the design of vectofusin a peptide with strong lentiviral transduction enhancement activities. Here the series of peptides with varying numbers of alanine or leucine residues, respectively, framed by the histidines was tested for their calcein release activity. Interestingly, the membrane pore formation and DNA transfection activities show a clear correlation with the hydrophilic angle. In contrast the membrane partitioning and the propensity to adopt helical conformations was hardly affected as long as the hydrophilic angle did not exceed a limiting value of 150°.

  • Comparative enantioseparation of chiral 4,4'-bipyridine derivatives on coated and immobilized amylose-based chiral stationary phases

    Paola Peluso, Barbara Sechi, Giancarlo Lai, Alessandro Dessì, Roberto Dallocchio, Sergio Cossu, Emmanuel Aubert, Robin Weiss, Patrick Pale, Victor Mamane, Bezhan Chankvetadze
    Journal of Chromatography A, 2020, 1625, pp.461303. ⟨10.1016/j.chroma.2020.461303⟩ | Publiée le 1 août 2020
    Article dans une revue

    The chromatographic performances of four coated and immobilized amylose phenylcarbamate-based chiral columns were evaluated and compared under normal phase (NP) elution conditions by using chiral 4,4'-bipyri-dine derivatives as analytes. n-Hexane/2-propanol 90:10 and n-hexane/2-propanol/methanol 90:5:5 mixtures were employed as mobile phases (MPs), and the effect of adding methanol in the MP on retention and selectivity was considered. The effect of temperature on retention and selectivity was also evaluated, and overall thermo-dynamic parameters associated with the analyte adsorption onto the CSP surface were derived from van't Hoff plots. Interesting cases of enantiomer elution order (EEO) reversal, which are dependent on the nature of polar modifier, analyte structure, column-type, and temperature, were observed. The impact of substitution pattern and electronic properties of analytes and selectors on the separation behaviour was investigated by correlating chro-matographic parameters and molecular properties determined by using density functional theory (DFT) calculations. Both coated and immobilized amylose tris(3,5-dimethylphenylcarbamate) columns allowed for the baseline enantioseparation (2.0 ≤ R S ≤ 4.9) of all 4,4'-bipyridines considered in this study. These results appear particularly useful because both enantiomers of these 4,4'-bipyridine derivatives are currently under investigation as new inhibitors of transthyretin fibrillogenesis, a biochemical phenomenon which is implicated to cause amyloid diseases.

  • Chiral stimuli-responsive metallo-supramolecular assembly induced by Cu II /Cu I redox change

    Maya Marinova, Antoine Bonnefont, Thierry Achard, Aline Maisse-François, Stéphane Bellemin-Laponnaz
    Chemical Communications, 2020, 56 (61), pp.8703-8706. ⟨10.1039/D0CC01716G⟩ | Publiée le 31 juillet 2020
    Article dans une revue

    We investigated the selective formation of homoleptic and heteroleptic metal complexes controlled by means of the chiral molecular instruction of the ligand and the coordination geometry of the metal. Our results showed that chiral self-recognition or self-discrimination may be induced by Cu I /Cu II redox transition using cyclic voltammetry. The further use of chiral ditopic ligands led to metallo-supramolecular copolymers with stimuli-responsive controlled arrangement.

  • Making Base-Assisted C–H Bond Activation by Cp*Co(III) Effective: A Noncovalent Interaction-Inclusive Theoretical Insight and Experimental Validation

    Fule Wu, Christophe Deraedt, Yann Cornaton, Julia Contreras-García, Mélanie Boucher, Lydia Karmazin, Corinne Bailly, Jean-Pierre Djukic
    Organometallics, 2020, 39 (14), pp.2609-2629. ⟨10.1021/acs.organomet.0c00253⟩ | Publiée le 27 juillet 2020
    Article dans une revue

    The base-assisted cyclometallation of 2-phenylpyridine (2-phpyH) by Cp*Co(III) was holistically addressed both theoretically and experimentally. Combined DFT and DLPNO-CCSD(T) methods assisted by QTAIM-based noncovalent interactions plots (NCI plots), interacting quantum atoms (IQA), and local energy decomposition (LED) analyses have been used for a comparative study of the CMD-promoted cyclocobaltation and the parent cycloiridation of the 2-phpyH. Results suggest a remarkable contribution of noncovalent interactions, especially local electrostatic interactions, in the evolution of the reactive site giving a rational for the optimization of cyclocobaltation. The theoretically predicted benefits of using the acetamidate anion as a base is rationalized and verified experimentally. Cobaltacycle [Cp*Co(2-phpy-C,N)I] was efficiently synthesized from the air-stable [Cp*CoI2]2 and 2-phpyH, in the presence of LiNHAc as base in 83% yield whereas with anhydrous NaOAc as base only 12% yield were achieved under similar conditions. By applying the [NHAc] -promoted cyclometallation various cobaltacycles were synthesized, analytically characterized and their structures resolved by X-ray crystallization analysis, confirming the importance of the acetamidate in the base-assisted cyclometallation. Experimental kinetic isotope effect (KIE) studies validated by Bigeleisen equation-based KIE computations confirm that the formation of the agostic transient is indeed the kinetic determining step of the CMD mechanism in dichloromethane. Application of the [Cp*CoI2]2/LiNHAc mixture to the catalysis of the condensation of 1,2-diphenyacetylene to various aromatics reveals the coexistence of two mechanisms, i.e. CMD and electrophilic C-H activation.

  • Hydroboration of Alkenes Catalysed by a Nickel N‐Heterocyclic Carbene Complex: Reaction and Mechanistic Aspects

    Franck Ulm, Yann Cornaton, Jean-Pierre Djukic, Michael Chetcuti, Vincent Ritleng
    Chemistry - A European Journal, 2020, 26 (41), pp.8916-8925. ⟨10.1002/chem.202000289⟩ | Publiée le 22 juillet 2020
    Article dans une revue

    The pentamethylcyclopentadienyl N-heterocyclic carbene nickel complex [Ni(η5-C5Me5)Cl(IMes)] (IMes = 1,3-dimesitylimidazol-2-ylidene) efficiently catalyses the anti-Markovnikov hydroboration of alkenes with catecholborane in the presence of a catalytic amount of potassium tert-butoxide, and joins the very exclusive club of nickel catalysts for this important transformation. Interestingly, the regioselectivity can be reversed in some cases by using pinacolborane instead of catecholborane. Mechanistic investigations involving control experiments, 1H and 11B NMR spectroscopy, cyclic voltammetry, piezometric measurements and DFT calculations suggest an initial reduction of the Ni(II) precursor to a Ni(I) active species with the concomitant release of H2. The crucial role of the alkoxo-catecholato-borohydride species resulting from the reaction of potassium tert-butoxide with catecholborane in the formation of an intermediate nickel-hydride species that would then be reduced a Ni(I) active species, is highlighted.

  • Noncovalent interactions in high-performance liquid chromatography enantioseparations on polysaccharide-based chiral selectors

    Paola Peluso, Victor Mamane, Sergio Cossu, Roberto Dallocchio
    Journal of Chromatography A, 2020, ⟨10.1016/j.chroma.2020.461202⟩ | Publiée le 19 juillet 2020
    Article dans une revue

    Designed more than thirty years ago in order to improve and maximize the discrimination capability of native polysaccharides, cellulose-and amylose-based selectors have shown excellent and unequalled performances for the enantioseparation of chiral compounds. The successful story of these chiral selectors relies on a multi-site high-ordered chiral platform which is held up by intramolecular hydrogen bonds (HBs), and makes the polymer able to host and discriminate enantiomers. In this environment, both achiral and stereoselective intermolecular noncovalent interactions play a pivotal role, and HBs, halogen bonds (XBs), dipole-dipole, π-π stacking, steric repulsive, and van der Waals interactions underlie adsorption process and formation of transient diastereomeric assemblies between the polymer and the enantiomer pair. In the last decades, advances in computational chemistry and spectroscopic techniques have improved knowledge of noncovalent interactions, contributing to decode their functions in chemical systems. Significantly, over time the growing interplay between experimental and theoretical approaches has contributed to unravel intermolecular forces underlying selector-selectand association and to understand recognition patterns. On this basis, this review summarizes seminal and representative studies dealing with noncovalent interactions that function in HPLC enantioseparations promoted by cellulose benzoates and phenylcarbamates of amylose and cellulose. The importance of integrating theoretical and experimental approaches to profile mechanisms and interaction patterns is highlighted by discussing focused case studies. In particular, the advantageous utilization of electrostatic potential (V) analysis and molecular dynamics (MD) simulations in this field is evidenced. A systematic compilation of all published literature has not been attempted.

  • Fluorinated Oleophilic Electrochromic Copolymer Based on 3‐(N‐Trifluoroacetamido)thiophene and 3,4‐Ethylenedioxythiophene (EDOT)

    Hu Wang, Yiyao Shen, Peihua Ma, Antoine Bonnefont, Yaokang Lv, Laurent Ruhlmann, Hang Ni, Wuchan Liu, Cheng Zhang
    ChemElectroChem, 2020, 7 (14), pp.3038-3043. ⟨10.1002/celc.202000530⟩ | Publiée le 16 juillet 2020
    Article dans une revue

    A new fluorine-containing monomer 3-(N-trifluoroacetamido)thiophene (F-TH) was synthesized and characterized for the first time. Its molecular structure was determined by a single-crystal X-ray study. F-TH functions as a building block in electropolymerization with 3,4-ethylenedioxythiophene (EDOT) gives a novel conjugated copolymer P(F-TH:EDOT) subsequently. Compared with the parent homopolymer poly(3,4-ethylenedioxythiophene) (PEDOT) film, sponge-like nanoporous P(F-TH:EDOT) film has a slightly larger band gap with a reduced hydrophilic and increased oleophilic surface. Spectroelectrochemical analysis results reveal that P(F-TH:EDOT) exhibits excellent electrochromic performances with higher optical contrast (55%) and much shorter coloring time (0.70 s) than that of PEDOT (43%, 1.54 s). The coloration efficiency value of P(F-TH:EDOT) achieves up to 167.9 cm2/C, 55% higher than that of PEDOT (108.1 cm2/C). These improved electrochromic properties of P(F-TH:EDOT) are probably related with the enhanced wettability to electrolyte solution.

  • Highly synergistic antimicrobial activity of magainin 2 and PGLa peptides is rooted in the formation of supramolecular complexes with lipids

    Christopher Aisenbrey, Mariana Amaro, Petr Pospíšil, Martin Hof, Burkhard Burkhard Bechinger
    Scientific Reports, 2020, 10 (1), ⟨10.1038/s41598-020-68416-1⟩ | Publiée le 15 juillet 2020
    Article dans une revue

    Magainin 2 and PGLa are cationic, amphipathic antimicrobial peptides which when added as equimolar mixture exhibit a pronounced synergism in both their antibacterial and pore-forming activities. Here we show for the first time that the peptides assemble into defined supramolecular structures along the membrane interface. The resulting mesophases are quantitatively described by state-of-the art fluorescence self-quenching and correlation spectroscopies. Notably, the synergistic behavior of magainin 2 and PGLa correlates with the formation of hetero-domains and an order-of-magnitude increased membrane affinity of both peptides. Enhanced membrane association of the peptide mixture is only observed in the presence of phophatidylethanolamines but not of phosphatidylcholines, lipids that dominate bacterial and eukaryotic membranes, respectively. Thereby the increased membrane-affinity of the peptide mixtures not only explains their synergistic antimicrobial activity, but at the same time provides a new concept to increase the therapeutic window of combinatorial drugs.

  • A new fluorescent hemicryptophane for acetylcholine recognition with an unusual recognition mode

    Nicolas Fantozzi, Rémi Pétuya, Alberto Insuasty, Augustin Long, Sara Lefevre, Aline Schmitt, Vincent Robert, Jean-Pierre Dutasta, Isabelle Baraille, Laure Guy, Emilie Genin, Didier Bégué, Alexandre Martinez, Sandra Pinet, Isabelle Gosse
    New Journal of Chemistry, 2020, 44 (27), pp.11853-11860. ⟨10.1039/d0nj02794d⟩ | Publiée le 13 juillet 2020
    Article dans une revue

    A new off-on fluorescent hemicryptophane probe for acetylcholine has been designed. This hemicryptophane, made fluorescent via an extension of the conjugation of its cyclotriveratrylene C3-symmetry part, exhibits improved fluorescence properties compared with fluorescent hemicryptophanes previously described. Indeed, both the excitation and emission wavelengths are red-shifted and the quantum yield is increased. Moreover, this hemicryptophane is able to bind acetylcholine with a high association constant of 3.2 × 104 M-1. This recognition process is accompanied by an increase in the brightness of the capsule. Surprisingly, contrary to what is commonly observed with cyclotriveratrylene-based hosts, the quaternary ammonium of the guest interacts with the tris(2-aminoethyl)amine south part of the hemicryptophane instead of the cyclotriveratrylene north part. This unusual binding mode is supported by both proton NMR experiments and density functional theory calculations.

  • Synthesis of Robust MOFs@COFs Porous Hybrid Materials via an Aza‐Diels–Alder Reaction: Towards High‐Performance Supercapacitor Materials

    Haijun Peng, Jesus Raya, Fanny Richard, Walid Baaziz, Ioan-Ovidiu Ersen, Artur Ciesielski, Paolo Samori
    Angewandte Chemie International Edition, 2020, ⟨10.1002/anie.202008408⟩ | Publiée le 7 juillet 2020
    Article dans une revue

    Metal–organic frameworks (MOFs) and covalent organic frameworks (COFs) have attracted enormous attention in recent years. Recently, MOF@COF are emerging as hybrid architectures combining the unique features of the individual components to enable the generation of materials displaying novel physicochemical properties. Herein we report an unprecedented use of aza‐Diels–Alder cycloaddition reaction as post‐synthetic modification of MOF@COF‐LZU1, to generate aza‐MOFs@COFs hybrid porous materials with extended π‐delocalization. A a proof‐of‐concept, the obtained aza‐MOFs@COFs is used as electrode in supercapacitors displaying specific capacitance of 20.35 μF cm−2 and high volumetric energy density of 1.16 F cm−3. Our approach of post‐synthetic modification of MOFs@COFs hybrids implement rational design for the synthesis of functional porous materials and expands the plethora of promising application of MOFs@COFs hybrid porous materials in energy storage applications.

  • The affinity of some Lewis bases for Hexafluoroisopropanol as a reference Lewis acid : an ITC/DFT study

    Milan R Milovanović, Quentin Dherbassy, Joanna Wencel-Delord, Françoise Colobert, Snežana D Zarić, Jean-Pierre Djukic
    ChemPhysChem, 2020, ⟨10.1002/cphc.202000560⟩ | Publiée le 3 juillet 2020
    Article dans une revue

    To figure out the possible role of 1,1,1,3,3,3-hexafluoropropan-2-ol (HFIP) as well as to provide reference thermochemical data in solution, the formation of Lewis acid-base complexes between HFIP (Lewis acid) and a series of 8 different Lewis bases (3 sulfoxides, 3 Nsp 2 pyridine derivatives, 1 aromatic amine, 1 cyclic aliphatic ether) was examined by Isothermal Titration Calorimetry (ITC) experiments and static Density Functional Theory augmented with Dispersion (DFT-D) calculations. Measured ITC association enthalpy values ΔHa spanned-9.3 kcal/mol to-14 kcal/mol. Computations including a PCM implicit solvation model produced similar exothermicity of association of all studied systems compared to the ITC data with ΔHa values ranging-8.5-12.7 kcal/mol. An additional set of calculations combining implicit and explicit solvation by chlorobenzene of the reactants, pointed out the relatively low interference of the solvent with the HFIP-base complexation, which main effect is to slightly enhance the Gibbs energy of the HFIP-Lewis base association. It is speculated that the interactions of bulk HFIP with Lewis bases therefore may significantly intervene in catalytic processes not only via the dynamic miscrostructuration of the medium but also more explicitly by affecting bonds' polarization at the Lewis bases.

  • High performance dyes based on triphenylamine, cinnamaldehyde and indane-1,3-dione derivatives for blue light induced polymerization for 3D printing and photocomposites

    Mira Abdallah, Frederic Dumur, Bernadette Graff, Akram Hijazi, Jacques Lalevee
    Dyes and Pigments, 2020, pp.108580. ⟨10.1016/j.dyepig.2020.108580⟩ | Publiée le 1 juillet 2020
    Article dans une revue

    In this research, high performance dyes based on triphenylamine, cinnamaldehyde and indane-1,3-dione derivatives have been designed/synthesized and evaluated as photoinitiators for visible light photopolymerization. The introduction of light-emitting diodes (LEDs) as low-cost and secured sources of irradiation is one of the major purposes in this study, where a LED at 405 nm was used for both the cationic polymerization (CP) of thin epoxide samples and the free radical polymerization (FRP) of thin TMPTA films. The proposed dyes showed very high efficiencies in the presence of the two-component photoinitiating systems based on Dye/Iodonium salt (Iod) couples or Dye/Amine (such as N-Phenylglycine (NPG) or ethyl 4-(dimethylamino)benzoate (EDB)) couples for the FRP and/or CP, highlighting their importance through a photo-oxidation (with Iod) process but also through a photo-reduction (with amine) process. The examined dyes are also able to initiate the FRP of thin acrylate films in the presence of the three-component (Dye/Iod/NPG) systems where very high rates of polymerization (Rp) and great final reactive function conversions (FCs) were achieved. Objectives of this work concern the study of the photoinitiating abilities of the different photoinitiating systems using FTIR technique but also the 2 study of the chemical mechanisms which was mainly examined in solution. The use of the investigated systems for 3D printing experiments (using LED projector or laser diode @405 nm) is particularly outlined. Finally, the production of thick glass fiber photocomposites presenting excellent depth of cure is also accomplished in the presence of these dyes (using near-UV conveyor: LED@395 nm).

  • Structure, interactions and membrane topology of HIV gp41 ectodomain sequences

    Christopher Aisenbrey, Burkhard Bechinger
    Biochimica et Biophysica Acta:Biomembranes, 2020, 1862 (7), pp.183274. ⟨10.1016/j.bbamem.2020.183274⟩ | Publiée le 1 juillet 2020
    Article dans une revue

    The gp41 type I membrane protein is part of the trimeric Env complex forming the spikes at the HIV surface. By interacting with cellular receptors, the Env protein complex initiates the infectious cycle of HIV. After the first contact has been established Env disassembles by shedding gp120 while the remaining gp41 undergoes a number of conformational changes which drive fusion of the cellular and the viral membranes. Here we investigated the membrane interactions and oligomerization of the two gp41 heptad repeat domains NHR and CHR. While these are thought to form a six-helix bundle in the post-fusion state little is known about their structure and role during prior fusion events. When investigated in aqueous buffer by CD and fluorescence quenching techniques the formation of NHR/CHR hetero-oligomers is detected. An equilibrium of monomers and hetero-oligomers is also observed in membrane environments. Furthermore, the partitioning to POPC or POPC/POPG 3/1 vesicles of the two domains alone or in combination has been studied. The membrane interactions were further characterized by 15N solid-state NMR spectroscopy of uniaxially oriented samples which shows that the polypeptide helices are oriented parallel to the bilayer surface. The 31P solid-state NMR spectra of the same samples are indicative of considerable disordering of the membrane packing. The data support models where NHR and CHR insert in the viral and cellular membranes, respectively, where they exhibit an active role in the membrane fusion events.

  • Phosphasalen group IV metal complexes: synthesis, characterization and ring opening polymerization of lactide

    Adrien T. Normand, Raluca Malacea-Kabbara, Rosita Lapenta, Aymeric Dajnak, Philippe R. Richard, Hélène Cattey, Anaëlle Bolley, Alfonso Grassi, Stefano Milione, Audrey Auffrant, Samuel Dagorne, Pierre Le Gendre
    Dalton Transactions, 2020, 49 (21), pp.6989-7004. ⟨10.1039/D0DT00972E⟩ | Publiée le 7 juin 2020
    Article dans une revue

    We report the synthesis of a series of Zr and Ti complexes bearing phosphasalen which differs from salen by the incorporation of two P atoms in the ligand backbone. The reaction of phosphasalen proligands (1a-1c)H2 with Zr(CH2Ph)4 led to different products depending on the nature of the N,N-linker in the ligand. In case of ethylene-linked phosphasalen, octahedral Zr complex 2a formed as a single stereoisomer in trans geometry. With the phenylene linker, it was shown by dynamic NMR spectroscopy that complex 2b exists as a mixture of trans and cis-β isomers in solution, both enantiomers (Δ and Λ) of the cis-β isomer being in fast equilibrium with respect to the NMR timescale. The use of a propylene-linked phosphasalen proligand 1cH2 led to a mixture of complexes among which a binuclear Zr complex 2c bridged only by one phosphasalen ligand could be isolated and characterized. Addition of 2 equiv of i PrOH to 2a and 2b afforded diisoproxy Zr complexes 3a and 3b as a mixture of trans and cis-β isomers, the latter undergoing fast Δ/Λ isomerization in solution. Addition of B(C6F5)3 to 2a and 2b gave cationic monobenzyl Zr complexes 4a and 4b which have been further converted into cationic alkoxy Zr complexes 5a-b and 6a-b by alcoholysis with i PrOH and (S)-methyl-lactate, respectively. The reaction of the phosphasalen proligands with Ti(NMe2)4 proceeded diastereoselectively giving rise to Ti complexes 7a-c in octahedral geometry with cis-β wrapping of the ligand. The complexes have been tested for the ROP of rac-lactide. The neutral phosphasalen Ti and Zr complexes showed only poor activity probably due to the encumbered and electron donating nature of the phosphasalen ligand. In contrast, the cationic Zr alkoxides 5a, 6a and 6b are effective initiators for the controlled and hetero-selective ROP of rac-lactide.

  • Kinetics of 1 H-13 C multiple-contact cross-polarization as a powerful tool to determine the structure and dynamics of complex materials : application to graphene oxide

    Jésus Raya, Alberto Bianco, Jérôme Hirschinger
    Physical Chemistry Chemical Physics, 2020, 22 (21), pp.12209-12227. ⟨10.1039/D0CP00454E⟩ | Publiée le 4 juin 2020
    Article dans une revue

    Hartmann-Hahn cross-polarization (HHCP) is the most widely used solid-state NMR technique to enhance the magnetization of dilute spins from abundant spins. Furthermore, as the kinetics of CP depends on dipolar interactions, it contains valuable information on molecular structure and dynamics. In this work, analytical solutions are derived for the kinetics of HHCP and multiple-contact CP (MC-CP) using both classical and non-classical spin-coupling models including the effects of molecular dynamics and several 1 H, 13 C relaxation and 1 H-13 C CP experiments are performed in graphene oxide (GO). HHCP is found to be inefficient in our GO sample due to very fast 1 H T1 relaxation. By contrast, the MC-CP technique which alleviates most of the magnetization loss by 1 H T1 relaxation leads to a much larger polarization transfer efficiency reducing the measuring time by an order of magnitude. A detailed analysis of the HHCP and MC-CP kinetics indicates the existence of at least two different kinds of hydroxyl (C-OH) functional groups in GO, the major fraction (~90%) of these groups being in the unusual "slow CP regime" in which the rate of 1 H T1 relaxation is fast compared to the rate of cross-polarization. This 13 C signal component is attributed to mobile C-OH groups interacting preferentially with fast-relaxing water molecules while the remaining carbons (~10%) in the usual "fast CP regime" are assigned to C-OH groups involved in hydrogen bonding with neighboring hydroxyl and/or epoxy groups. 2

  • On the Functional Annotation of Open-Channel Structures in the Glycine Receptor

    Adrien Henri Cerdan, Marco Cecchini
    Structure, 2020, 28 (6), pp.690 - 693.e3. ⟨10.1016/j.str.2020.05.003⟩ | Publiée le 2 juin 2020
    Article dans une revue

    The glycine receptor (GlyR) is by far the best-characterized pentameric ligand-gated ion channel, with several high-resolution structures from X-ray crystallography, cryoelectron microscopy (cryo-EM), and modeling. Nonetheless, the significance of the currently available open-pore conformations is debated due to their diversity in the pore geometry. Here, we discuss the physiological significance of existing models of the GlyR active state based on conductance and selectivity measurements by computational electrophysiology. The results support the conclusion that the original cryo-EM reconstruction of the active state obtained in detergents as well as its subsequent refinement by molecular dynamics simulations are likely to be non-physiological as they feature artificially dilated ion pores. In addition, the calculations indicate that a physiologically relevant open pore should be constricted within a radius of 2.5 and 2.8 Å, which is consistent with previous modeling, electrophysiology measurements, and the most recent cryo-EM structures obtained in a native lipid membrane environment.

  • High-resolution late Holocene sedimentary cores record the long history of the city of Cádiz (south-western Spain)

    Ferréol Salomon, Darío Bernal-Casasola, José Díaz, Macarena Lara, Salvador Domínguez-Bella, Damien Ertlen, Patrick Wassmer, Pierre Adam, Philippe Schaeffer, Laurent Hardion, Cécile Vittori, Stoil Chapkanski, Hugo Delile, Laurent Schmitt, Frank Preusser, Martine Trautmann, Alessia Masi, Cristiano Vignola, Laura Sadori, Jacob Morales, Paloma Vidal Matutano, Vincent Robin, Benjamin Keller, Ángel Sanchez Bellón, Javier Martínez López, Gilles Rixhon
    Scientific Drilling, 2020, 27, pp.35-47. ⟨10.5194/sd-27-35-2020⟩ | Publiée le 27 mai 2020
    Article dans une revue

    Today, coastal cities worldwide are facing major changes resulting from climate change and anthropogenic forcing, which requires adaptation and mitigation strategies to be established. In this context, sedimentological archives in many Mediterranean cities record a multi-millennial history of environmental dynamics and human adaptation, revealing a long-lasting resilience. Founded by the Phoenicians around 3000 years ago, Cádiz (south-western Spain) is a key example of a coastal resilient city. This urban centre is considered to be one of the first cities of western Europe and has experienced major natural hazards during its long history, such as coastal erosion, storms, and also tsunamis (like the one in 1755 CE following the destructive Lisbon earthquake). In the framework of an international, joint archaeological and geoarchaeological project, three cores have been drilled in a marine palaeochannel that ran through the ancient city of Cádiz. These cores reveal a 50m thick Holocene sedimentary sequence. Importantly, most of the deposits date from the 1st millennium BCE to the 1st millennium CE. This exceptional sedimentary archive will allow our scientific team to achieve its research goals, which are (1) to reconstruct the palaeogeographical evolution of this specific coastal area; (2) to trace the intensity of activities of the city of Cádiz based on archaeological data, as well as geochemical and palaeoecological indicators; and (3) to identify and date high-energy event deposits such as storms and tsunamis.

  • Hemicryptophanes with Improved Fluorescent Properties for the Selective Recognition of Acetylcholine over Choline

    Augustin Long, Elise Antonetti, Alberto Insuasty, Sandra Pinet, Isabelle Gosse, Vincent Robert, Jean-Pierre Dutasta, Alexandre Martinez
    Journal of Organic Chemistry, 2020, 85 (10), pp.6400-6407. ⟨10.1021/acs.joc.0c00217⟩ | Publiée le 15 mai 2020
    Article dans une revue

    The synthesis of two new fluorescent hemicryptophanes is reported. They were found to be efficient and selective receptors for acetylcholine over choline. When compared to other hemicryptophane hosts previously reported for the selective recognition of acetylcholine, they display improved fluorescent properties: their maximum emission wavelengths are red-shifted and the quantum yields are higher. NMR titration experiments and density functional theory (DFT) calculations support the results obtained from fluorescence spectroscopy and give insights into the interactions involved in the host/guest complexes and into the selectivity for acetylcholine over choline.

  • A concerted evolution of supramolecular interactions in a {cation; metal complex; π-acid; solvent} anion-π system

    Emilia Kuzniak, James Hooper, Monika Srebro-Hooper, Jedrzej Kobylarczyk, Magdalena Dziurka, Bogdan Musielak, Dawid Pinkowicz, Jesus Raya, Sylvie Ferlay, Robert Podgajny
    Inorganic Chemistry Frontiers, 2020, 7 (9), pp.1851-1863. ⟨10.1039/d0qi00101e⟩ | Publiée le 5 mai 2020
    Article dans une revue

    Combined Single-Crystal XRD, solution 13 C and 195 Pt NMR, solid-state 195 Pt NMR and UV-vis measurements, together with comprehensive (TD)DFT calculations, are used to describe the supramolecular interactions and sequential concerted structural transformation occurring in a {PPh4 + ;[Pt(CN)4] 2-;TCP;CH2Cl2} supramolecular system (TCP-tetracyanopyrazine). In the solid-state, a mixture of needle-like co-crystals first appears, (PPh4)2{[TCP][Pt(CN)4]} (1) and (PPh4)2{[TCP][Pt(CN)4]}•2CH2Cl2 (2), and subsequent recrystallization leads to block-shaped co-crystals of (PPh4)2{[TCP]2[Pt(CN)4]}•2CH2Cl2 (3), wherein double {Pt(CN)4] 2-;TCP} and triple {[Pt(CN)4] 2-;TCP;CH2Cl2} and {PPh4 + ;[Pt(CN)4] 2-;TCP} synthons present either in 1 or 2 are reproduced in 3. The structural pathway (1/2→3) is accompanied by a 1D-to-2D modular evolution of anion-π interactions between [Pt(CN)4] 2and π-acidic TCP that seems to be driven, as indicated by the calculations, not by maximizing their strength but rather optimizing other crystal interactions, e.g. between PPh4 + cations. Formation of the corresponding {[Pt(CN)4] 2-;π-acid} anion-π contacts in solution is evidenced by 13 C NMR shifts and by new low-energy electronic absorption in the visible region (UV-vis). Finally, a combined solution/solid-state 195 Pt NMR approach is used for the first time to shed light on the geometry and interactions involving such aggregates; it shows that the degree of trapping of [Pt(CN)4] 2near a π-acidic surface can be monitored by 195 Pt NMR chemical shifts. The results give fresh insight into block arrangement tactics and characterization of hybrid organic-inorganic co-crystal salts, and into aggregation controlled properties.

  • Rational Design, Synthesis, Characterization and Evaluation of Iodinated 4,4′-Bipyridines as New Transthyretin Fibrillogenesis Inhibitors

    Alessandro Dessì, Paola Peluso, Roberto Dallocchio, Robin Weiss, Giuseppina Andreotti, Mariateresa Allocca, Emmanuel Aubert, Patrick Pale, Victor Mamane, Sergio Cossu
    Molecules, 2020, 25 (9), pp.2213. ⟨10.3390/molecules25092213⟩ | Publiée le 1 mai 2020
    Article dans une revue

    The 3,3 ,5,5-tetrachloro-2-iodo-4,4-bipyridine structure is proposed as a novel chemical scaffold for the design of new transthyretin (TTR) fibrillogenesis inhibitors. In the frame of a proof-of-principle exploration, four chiral 3,3 ,5,5-tetrachloro-2-iodo-2-substituted-4,4-bipyridines were rationally designed and prepared from a simple trihalopyridine in three steps, including a Cu-catalysed Finkelstein reaction to introduce iodine atoms on the heteroaromatic scaffold, and a Pd-catalysed coupling reaction to install the 2-substituent. The corresponding racemates, along with other five chiral 4,4-bipyridines containing halogens as substituents, were enantioseparated by high-performance liquid chromatography in order to obtain pure enantiomer pairs. All stereoisomers were tested against the amyloid fibril formation (FF) of wild type (WT)-TTR and two mutant variants, V30M and Y78F, in acid mediated aggregation experiments. Among the 4,4-bipyridine derivatives, interesting inhibition activity was obtained for both enantiomers of the 3,3 ,5,5-tetrachloro-2-(4-hydroxyphenyl)-2-iodo-4,4-bipyridine. In silico docking studies were carried out in order to explore possible binding modes of the 4,4-bipyridine derivatives into the TTR. The gained results point out the importance of the right combination of H-bond sites and the presence of iodine as halogen-bond donor. Both experimental and theoretical evidences pave the way for the utilization of the iodinated 4,4-bipyridine core as template to design new promising inhibitors of TTR amyloidogenesis.

  • Synthesis and Structure of Arene Ru(II) N ∧ O-Chelating Complexes: In Vitro Cytotoxicity and Cancer Cell Death Mechanism

    Sundarraman Balaji, Mohamed Kasim Mohamed Subarkhan, Hangxiang Wang, Rengan Ramesh, David Semeril
    Organometallics, 2020, 39 (8), pp.1366-1375. ⟨10.1021/acs.organomet.0c00092⟩ | Publiée le 27 avril 2020
    Article dans une revue

    A panel of six new structurally related organo-metallic arene Ru(II) complexes of general composition [(η 6-benzene)Ru(L)Cl] (1−3) and [(η 6-p-cymene)Ru(L)Cl] (4−6) (L = dimethylaminobenzhydrazones) have been designed and synthesized in search of new ruthenium anticancer drugs. The identities of the synthesized complexes have been well-established by elemental analysis and various spectral (FT-IR, UV−vis, NMR, and HR-MS) methods. The solid-state molecular structures of the ruthenium complexes were determined with the help of X-ray crystallography and confirms the presence of a pseudo-octahedral geometry around ruthenium. Furthermore, cytotoxicity of the complexes has been unveiled with the aid of MTT assay against A549 (lung carcinoma), LoVo (colon adenocarcinoma), HuH-7 (hepato cellular carcinoma) along with the noncancerous 16HBE (human lung bronchial epithelium) cells and compared with the effect of the standard drug cisplatin. Interestingly, complexes 4, 5, and 6 which contain a p-cymene moiety induce a remarkable decrease of cell viability against all the cancer cells tested. The capacity corresponding to the inhibition of A549 cells proliferation was analyzed by 5-ethynyl-2-deoxyuridine (EdU) incorporation assay and indicated a notable effect of p-cymene counterparts 4, 5, and 6 over cisplatin. Further studies such as AO-EB (acridine orange− ethidium bromide) staining, flow cytometry, and Western blot analyses on cell death mechanism signified that the cytotoxicity was associated with apoptosis in cancer cells. This clearly suggests that p-cymene-capped Ru(II) complexes are also one of the propitious cancer therapeutic candidates and are worthy of further investigations.

  • Adsorbent screening for airborne BTEX analysis and removal

    Irene Lara-Ibeas, Cristina Megias-Sayago, Alberto Rodríguez-Cuevas, Rubén Ocampo-Torres, Benoît Louis, Stéphane Colin, Stéphane Le Calvé
    Journal of Environmental Chemical Engineering, 2020, 8 (2), pp.103563. ⟨10.1016/j.jece.2019.103563⟩ | Publiée le 1 avril 2020
    Article dans une revue

    Adsorption is a commonly used technique for removal and analysis of gaseous pollutants due to its cost efficiency at low concentrations. In this work, single and competitive BTEX adsorptions were studied on three non-porous, mesoporous and microporous commercial adsorbents, namely Carbopack® B, SBA-16 and HKUST-1, respectively. For all these materials, C8 aromatics were preferentially adsorbed, preventing in some cases the adsorption of the most volatile species, i.e. benzene and toluene. This behavior indicates that the competition phenomenon is closely related to the strength of adsorbate-adsorbent interactions. Activation energies for the desorption process were determined to be 33.8 and 33.7 and 35.9 kJ/mol for Carbopack® B, SBA-16 and HKUST-1, respectively, demonstrating that

  • Volatile organic compounds (VOCs) removal capacity of ZSM-5 zeolite adsorbents for near real-time BTEX detection

    Cristina Megias-Sayago, Irene Lara-Ibeas, Qiang Wang, Stéphane Le Calvé, Benoît Louis
    Journal of Environmental Chemical Engineering, 2020, 8 (2), pp.103724. ⟨10.1016/j.jece.2020.103724⟩ | Publiée le 1 avril 2020
    Article dans une revue

    The environmental impact of air pollution along with the registered detrimental effects on human health due to BTEX exposure have forced most countries to set limit values in public spaces and buildings, requiring the development of in situ devices able to quantify in (near)-real time the pollutants concentration, even at ppb levels. In this work, several ZSM-5 zeolites with 79 < Si / Al < 316 have been synthesized and used as part of a pre-concentration unit connected to a miniaturized GC prototype, needed to drop the detection limit according to current legislation. The most important parameters influencing the multicomponent gas-phase adsorption of BTEX over ZSM-5 zeolites have been found to be the number of available acid sites (Al content), the zeolite pore size and its hydrophobicity. The experimental results demonstrate that a compromise between the hydrophobic character and the number of Al atoms should be found in order to properly design an adsorbent for near-real time BTEX detection.

  • Electron Storage System Based on a Two-Way Inversion of Redox Potentials

    Alexis Gosset, Liam Wilbraham, Štěpánka Nováková Lachmanová, Romana Sokolová, Grégory Dupeyre, Fabien Tuyèras, Philippe Ochsenbein, Christian Perruchot, Henri-Pierre Jacquot de Rouville, Hyacinthe Randriamahazaka, Lubomír Pospíšil, Ilaria Ciofini, Magdaléna Hromadová, Philippe Lainé
    Journal of the American Chemical Society, 2020, 142 (11), pp.5162-5176. ⟨10.1021/jacs.9b12762⟩ | Publiée le 18 mars 2020
    Article dans une revue

    Molecular-level multielectron handling toward electrical storage is a worthwhile approach to solar energy harvesting. Here, a strategy which uses chemical bonds as electron reservoirs is introduced to demonstrate the new concept of “structronics” (a neologism derived from “structure” and “electronics”). Through this concept, we establish, synthesize, and thoroughly study two multicomponent “super-electrophores”: 1,8-dipyridyliumnaphthalene, 2, and its N,N-bridged cyclophane-like analogue, 3. Within both of them, a covalent bond can be formed and subsequently broken electrochemically. These superelectrophores are based on two electrophoric (pyridinium) units that are, on purpose, spatially arranged by a naphthalene scaffold. A key characteristic of 2 and 3 is that they possess a LUMO that develops through space as the result of the interaction between the closely positioned electrophoric units. In the context of electron storage, this “super-LUMO” serves as an empty reservoir, which can be filled by a two-electron reduction, giving rise to an elongated C–C bond or “super-HOMO”. Because of its weakened nature, this bond can undergo an electrochemically driven cleavage at a significantly more anodic—yet accessible—potential, thereby restoring the availability of the electron pair (reservoir emptying). In the representative case study of 2, an inversion of potential in both of the two-electron processes of bond formation and bond-cleavage is demonstrated. Overall, the structronic function is characterized by an electrochemical hysteresis and a chemical reversibility. This structronic superelectrophore can be viewed as the three-dimensional counterpart of benchmark methyl viologen (MV).

  • The Glycine Receptor Allosteric Ligands Library (GRALL)

    Adrien Cerdan, Marion Sisquellas, Gilberto Pereira, Diego E Barreto Gomes, Jean-Pierre Changeux, Marco Cecchini
    Bioinformatics, 2020, ⟨10.1093/bioinformatics/btaa170⟩ | Publiée le 12 mars 2020
    Article dans une revue

    Motivation: Glycine receptors (GlyR) mediate fast inhibitory neurotransmission in the brain and have been recognized as key pharmacological targets for pain. A large number of chemically diverse compounds that are able to modulate GlyR function both positively and negatively have been reported, which provides useful information for the development of pharmacological strategies and models for the allosteric modulation of these ion channels. Results: Based on existing literature, we have collected 218 unique chemical entities with documented modulatory activities at homomeric GlyR-α1 and-α3 and built a database named GRALL. This collection includes agonists, antagonists, positive and negative allosteric modulators, and a number of experimentally inactive compounds. Most importantly, for a large fraction of them a structural annotation based on their putative binding site on the receptor is provided. This type of annotation, which is currently missing in other drug banks, along with the availability of cooperativity factors from radioligand displacement experiments are expected to improve the predictivity of in silico methodologies for allosteric drug discovery and boost the development of conformation-based pharmacological approaches. Availability: The GRALL library is distributed as a web-accessible database at the following link: https://ifm.chimie.unistra.fr/grall. For each molecular entry, it provides information on the chemical structure, the ligand-binding site, the direction of modulation, the potency, the 3D molecular structure and quantum mechanical charges as determined by our in house pipeline.

  • Synthesis, Characterization and Catalytic Activity of Chiral NHC Platinum(II) Pyridine Dihalide Complexes

    Romain Pertschi, Delphine Hatey, Patrick Pale, Pierre de Frémont, Aurélien Blanc
    Organometallics, 2020 | Publiée le 4 mars 2020
    Article dans une revue

    A series of platinum(II) dihalide pyridine complexes bearing chiral C 2-symmetric N-heterocyclic carbene (NHC) ligands [Pt(NHC *)(Py)(Hal) 2 ] was synthesized in a one pot procedure and characterized by NMR spectroscopy and single crystal X-ray diffraction (SC-XRD). The complexes were tested for the asymmetric cycloisomerization of enynol into bicyclo[3.1.0]hexanone and feature an excellent catalytic activity at room temperature along with a modest enantiomeric induction (up to 39%ee). 2

  • Inhibition of Phytosterol Biosynthesis by Azasterols

    Sylvain Darnet, Laetitia B B Martin, Pierre Mercier, Franz Bracher, Philippe Geoffroy, Hubert Schaller
    Molecules, 2020, 25 (5), ⟨10.3390/molecules25051111⟩ | Publiée le 2 mars 2020
    Article dans une revue

    Inhibitors of enzymes in essential cellular pathways are potent probes to decipher intricate physiological functions of biomolecules. The analysis of Arabidopsis thaliana sterol profiles upon treatment with a series of azasterols reveals a specific in vivo inhibition of SMT2, a plant sterol-C-methyltransferase acting as a branch point between the campesterol and sitosterol biosynthetic segments in the pathway. Side chain azasteroids that modify sitosterol homeostasis help to refine its particular function in plant development.

  • Interdigitated conducting tetrathiafulvalene-based coordination networks

    Damien Bechu, Lilia Xie, Nolwenn Le Breton, Sylvie Choua, Mircea Dincă, Mir Wais Hosseini, Stephane Baudron
    Chemical Communications, 2020, 56 (16), pp.2407-2410. ⟨10.1039/C9CC09960C⟩ | Publiée le 25 février 2020
    Article dans une revue

    Assembly of a novel ethylenedithio-tetrathiafulvalene (EDT-TTF) derivative bearing two adjacent 4-thiopyridyl groups with M(NCS)2 nodes (M = Fe, Co) leads to two isostructural 1D coordination polymers showing an enhancement of their electronic conductivity by six orders of magnitude (10-6 vs 10-12 S/cm), upon surface oxidation by iodine and subsequent generation of EDT-TTF-based radicals.

  • Strategies for the Controlled Covalent Double Functionalization of Graphene Oxide

    Isabella Anna Vacchi, Shi Guo, Jesus Raya, Alberto Bianco, Cecilia Ménard-Moyon
    Chemistry - A European Journal, 2020, ⟨10.1002/chem.201905785⟩ | Publiée le 7 février 2020
    Article dans une revue

    Graphene oxide (GO) is a versatile platform with unique properties that have found broad applications in the biomedical field. Double functionalization is a key aspect in the design of multifunctional GO with combined imaging, targeting, and therapeutic properties. Compared to noncovalent functionalization, covalent strategies lead to GO conjugates with a higher stability in biological fluids. However, only a few double covalent functionalization approaches have been developed so far. The complexity of GO makes the derivatization of the oxygenated groups difficult to control. The combination of a nucleophilic epoxide ring opening with the derivatization of the hydroxyl groups through esterification or Williamson reaction was investigated. The conditions were selective and mild, thus preserving the structure of GO. Our strategy of double functionalization holds great potential for different applications in which the derivatization of GO with different molecules is needed, especially in the biomedical field.

  • Polyoxovanadate-iodobodipy supramolecular assemblies: new agents for high efficiency cancer photochemotherapy

    Yaqi Gu, Qi Li, Yichao Huang, Yingting Zhu, Yongge Wei, Laurent Ruhlmann
    Chemical Communications, 2020, 56 (19), pp.2869-2872. ⟨10.1039/C9CC09944A⟩ | Publiée le 5 février 2020
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    Fe-containing sludges DW/Fe were prepared by using electroflocculation treatment of printing and dyeing wastewater (DW) provided by a company. To further investigate the formation process and the properties of DW/Fe sludges and their application in anode materials of Li-ion battery, the DW/Fe sludges prepared from industrial wastewater were compared to three other sludges MB/Fe, RB/Fe, Ta/Fe prepared from model solutions containing either methyl blue (MB), rhodamine B (RB) or tartrazine (Ta). Also, DW/Fe sludges were calcined at 500 ℃ in N2 atmosphere, to form iron oxide/carbon composite C-DW/Fe. The composition and structure of the sludges and of the C-DW/Fe composite were analyzed through FTIR, XRD, TGA, SEM, TEM and XPS, and their performances as anode of Li-ion batteries were studied by adding different proportions of conductive agent (super P® conductive carbon black). Our results show that the sludges are a complex of Fe3O4 and organic matter. The specific capacity and stability can be improved during the charge-discharge test by increasing the amount of carbon black. More importantly, this improvement is more pronounced on DW/Fe that does not require high temperature carbonization, which means sludges can not only protect the environment and avoid waste of resources, but also can be directly and widely used in decentralized energy storage devices.

  • Additional information on “Direct comparison of the in vitro and in vivo stability of DFO, DFO* and DFOcyclo* for 89Zr-immunoPET”

    René Raavé, Gerwin Sandker, Pierre Adumeau, Christian Borch Jacobsen, Floriane Mangin, Michel Meyer, Mathieu Moreau, Claire Bernhard, Laurène da Costa, Adrien Dubois, Victor Goncalves, Magnus Gustafsson, Mark Rijpkema, Otto Boerman, Jean-Claude Chambron, Sandra Heskamp, Franck Denat
    European Journal of Nuclear Medicine and Molecular Imaging, 2020, 47 (2), pp.505-506. ⟨10.1007/s00259-019-04561-8⟩ | Publiée le 1 février 2020
    Article dans une revue

  • Peptides derived from the C-terminal domain of HIV-1 Viral Protein R in lipid bilayers: Structure, membrane positioning and gene delivery

    Arnaud Marquette, Christian Leborgne, Vanessa Schartner, Evgeny Salnikov, Burkhard Bechinger, Antoine Kichler
    Biochimica et Biophysica Acta:Biomembranes, 2020, 1862 (2), pp.183149. ⟨10.1016/j.bbamem.2019.183149⟩ | Publiée le 1 février 2020
    Article dans une revue

    Viral protein R (Vpr) is a small accessory protein of 96 amino acids that is present in Human and simian immunodeficiency viruses. Among the very different properties that Vpr possesses we can find cell penetrating capabilities. Based on this and on its capacity to interact with nucleic acids we previously investigated the DNA transfection properties of Vpr and subfragments thereof. We found that fragments of the C-terminal helical domain of Vpr are able to deliver efficiently plasmid DNA into different cell lines. As the amphipathic helix may play a role in the interactions with membranes, we investigated whether insertion of a proline residue in the alpha-helix modifies the transfection properties of Vpr. Unexpectedly, we found that the resulting Vpr55-82 Pro70 peptide was even more efficient than wild type Vpr55-82 in the gene delivery assays. Using circular dichroism, light scattering and solid-state NMR techniques, we characterized the secondary structure and interactions of Vpr and several mutants with model membranes. A model is proposed where the proline shifts the dissociation equilibrium of the peptide-cargo complex and thereby its endosomal release.

  • Manipulation of the molecular spin crossover transition of Fe(H 2 B(pz) 2 ) 2 (bipy) by addition of polar molecules

    Paulo Costa, Guanhua Hao, Alpha N’diaye, Lucie Routaboul, Pierre Braunstein, Xin Zhang, Jian Zhang, Thilini Ekanayaka, Qin-Yin Shi, Vicki Schlegel, Bernard Doudin, Axel Enders, P Dowben
    Journal of Physics: Condensed Matter, 2020, 32 (3), pp.034001. ⟨10.1088/1361-648X/ab468c⟩ | Publiée le 16 janvier 2020
    Article dans une revue

    The addition of various dipolar molecules is shown to affect the temperature dependence of the spin state occupancy of the much studied spin crossover Fe(II) complex, [Fe{H2B(pz)2}2(bipy)] (pz = pyrazol-1-yl, bipy = 2,2'-bipyridine). Specifically, the addition of benzimidazole results in a re-entrant spin crossover transition, i.e. the spin state starts in the mostly low spin state, then high spin state occupancy increases, and finally the high spin state occupancy decreases with increasing temperature. This behavior contrasts with that observed when the highly polar p -benzoquinonemonoimine zwitterion C6H2(...NH2)2(...O)2 was mixed with [Fe{H2B(pz)2}2(bipy)], which resulted in locking [Fe{H2B(pz)2}2(bipy)] largely into a low spin state while addition of the ethyl derivative C6H2(...NHC2H5)2(...O)2 did not appear to perturb the spin crossover transition of [Fe{H2B(pz)2}2(bipy)].

  • N,O-Dialkyl deoxynojirimycin derivatives as CERT START domain ligands

    Tessa Castellan, Cécile Santos, Frédéric Rodriguez, Mathieu L Lepage, Yan Liang, Anne Bodlenner, Philippe Compain, Yves Génisson, Cécile Baudoin-Dehoux, Stéphanie Ballereau
    Bioorganic and Medicinal Chemistry Letters, 2020, pp.126796. ⟨10.1016/j.bmcl.2019.126796⟩ | Publiée le 15 janvier 2020
    Article dans une revue

    Sphingolipids (SLs) are essential constituents of the cell membranes that also play a major role in signaling processes, notably in relation with cell growth, differentiation and apoptosis. 1 The metabolism of SLs is finely regulated by a network of highly compartmentalized, yet interdependent, enzymatic pathways centered on the pivotal metabolite ceramide (Cer). The complexity of this metabolism is also due to the specific subcellular localization of the corresponding enzymes, correlated to the marked hydrophobicity of most of the Cer derivatives. 1 The conjunction of these two characteristics calls for specific transport mechanisms to transfer SLs between organelles' membranes. Thus, Cer generated on the cytosolic side of the endoplasmic reticulum (ER) has to be delivered to the trans-Golgi region to be further metabolized. In particular, Cer conversion into sphingomyelin (SM) relies on the selective trafficking operated by the ceramide transport protein CERT. 2

  • Directing the solid-state photochromic and luminescent behaviors of spiromolecules with Dawson and Anderson polyoxometalate units

    Hachem Dridi, Amandine Boulmier, Patricia Bolle, Anne Dolbecq, Jean-Noël Rebilly, Fréderic Banse, Laurent Ruhlmann, Hélène Sérier-Brault, Remi Dessapt, Pierre Mialane, Olivier Oms
    Journal of Materials Chemistry C, 2020, 8 (2), pp.637-649. ⟨10.1039/c9tc05906g⟩ | Publiée le 2 janvier 2020
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    A series of three new polyoxometalate/spiromolecules compounds-including the (TBA)3[AlMo6-SN] (SN = spironaphthoxazine) and (TBA)3[AlMo6-SP] (SP = spiropyran) Anderson-type polyoxometalates (POMs) and the unprecedented (TBA)5[P2W15V3-SP] Dawson-type species-has been synthesized and characterized using a full panel of techniques. These hybrids have been thoroughly investigated by (spectro)electrochemical techniques, allowing not only to extract the electrochemical data characterizing these POMs but also to deeply investigate the redox mechanisms involved, including the dimerization process occuring during the oxidation step. The solid-state photochromic properties of these species have been fully studied and the photochromic kinetic parameters determined. It revealed that while in (TBA)5[P2W15V3-SP] the merocyanin form is highly stabilized, (TBA)3[AlMo6-SN] represents highly robust optical switch. Importantly, the room temperature solid-state luminescent properties of such assemblies have been investigated for the first time. It has been evidenced that (TBA)3[AlMo6-SP] exhibits a strong red emission under UV irradiation, while the luminescence of the related (TBA)3[MnMo6-SP] is weaker and that (TBA)5[P2W15V3-SP] does not exhibit luminescent properties. These emission intensity differences have been interpreted in terms of differences in photoinduced electron transfers from the excited state of the merocyanine isomer to the inorganic units. A correlation between its efficiency and the electron acceptor ability of the POMs determined from electronic absorption spectroscopic measurement and electrochemical data has been proposed.

  • Ultrafast Processes: Coordination Chemistry and Quantum Theory

    Chantal Daniel
    Physical Chemistry Chemical Physics, 2020, 23 (1), pp.43-58. ⟨10.1039/D0CP05116K⟩ | Publiée le 1 janvier 2020
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    Coordination compounds, characterized by fascinating and tunable electronic properties, are capable of binding easily to proteins, polymers, wires and DNA. Upon irradiation, these molecular systems develop functions finding applications in solar cells, photocatalysis, luminescent and conformational probes, electron transfer triggers and diagnostic or therapeutic tools. The control of these functions is activated by the light wavelength, the metal/ligand cooperation and the environment within the first picoseconds (ps). After a brief summary of the theoretical background, this perspective reviews case studies, from 1st row to 3rd row transition metal complexes, that illustrate how spin–orbit, vibronic coupling and quantum effects drive the photophysics of this class of molecules at the early stage of the photoinduced elementary processes within the fs–ps time scale range.

  • Functionalized Membrane Domains: An Ancestral Feature of Archaea?

    Maxime Tourte, Philippe Schaeffer, Vincent Grossi, Phil M. Oger
    Frontiers in Microbiology, 2020, 11, pp.526. ⟨10.3389/fmicb.2020.00526⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Bacteria and Eukarya organize their plasma membrane spatially into domains of distinct functions. Due to the uniqueness of their lipids, membrane functionalization in Archaea remains a debated area. A novel membrane ultrastructure predicts that monolayer and bilayer domains would be laterally segregated in the hyperthermophilic archaeon Thermococcus barophilus. With very different physico-chemical parameters of the mono-and bilayer, each domain type would thus allow the docking of different membrane proteins and express different biological functions in the membrane. To estimate the ubiquity of this putative membrane ultrastructure in and out of the order Thermococcales, we re-analyzed the core lipid composition of all the Thermococcales type species and collected all the literature data available for isolated archaea. We show that all species of Thermococcales synthesize a mixture of diether bilayer forming and tetraether monolayer forming lipids, in various ratio from 10 to 80% diether in Pyrococcus horikoshii and Thermococcus gorgonarius, respectively. Since the domain formation prediction rests only on the coexistence of di-and tetraether lipids, we show that all Thermococcales have the ability for domain formation, i.e., differential functionalization of their membrane. Extrapolating this view to the whole Archaea domain, we show that almost all archaea also have the ability to synthesize di-and tetraether lipids, which supports the view that functionalized membrane domains may be shared between all Archaea. Hence domain formation and membrane compartmentalization may have predated the separation of the three domains of life and be essential for the cell cycle.

  • Halogen bond in separation science: A critical analysis across experimental and theoretical results

    Paola Peluso, Victor Mamane, Alessandro Dessì, Roberto Dallocchio, Emmanuel Aubert, Carlo Gatti, Debby Mangelings, Sergio Cossu
    Journal of Chromatography A, 2020, 1616, pp.460788. ⟨10.1016/j.chroma.2019.460788⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    The halogen bond (XB) is a noncovalent interaction involving a halogen acting as electrophile and a Lewis base. In the last decades XB has found practical application in several fields. Nevertheless, despite the pivotal role of noncovalent interactions in separation science, investigations of XB in this field are still in their infancy, and so far a limited number of studies focusing on solid phase extraction, liquid-liquid microextraction, liquid-phase chromatography, and gas chromatography separation have been published. In addition, in the last few years, our groups have been systematically studying the potentiality of XB for HPLC enantioseparations. On this basis, in the present paper up-to-date results emerging from focused experiments and theoretical analyses performed by our laboratories are integrated with a descriptive presentation of XB features and the few studies published until now in separation science. Then, the aim of this article is to provide a comprehensive and critical discussion of the topic, and account for some still open issues in the application of XB to separate chemical mixtures.

  • A Supramolecular Model for the Co‐Catalytic Role of Nitro Compounds in Brønsted Acid Catalyzed Reactions

    Joel Jose Montalvo Acosta, Marian Dryzhakov, Edward Richmond, Marco Cecchini, Joseph Moran
    Chemistry - A European Journal, 2020, 8th EuChemS Chemistry Congress, 26 (48), pp.10976-10980. ⟨10.1002/chem.202000368⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Nitro compounds are known to change reaction rates and kinetic concentration dependence of Brønsted-acid-catalyzed reactions. Yet, no mechanistic model exists to account for these observations. Herein we present an atomistic model for the catalytically active form for an alcohol dehydroazidation reaction, generated by DFT calculations. which consists of an H-bonded aggregate of two molecules of Brønsted acid and two molecules of nitro compound. The computed O-H stretching frequencies for the aggregate indicate they are stronger acids than the individual acid molecules and serve as predictors for experimental reaction rates. Applying the model to a chemically diverse set of potential promoters, we predicted and verified experimentally that sulfate esters induce a similar co-catalytic effect. The important implication is that Brønstedacid catalysis must be viewed from a supramolecular perspective that accounts for not only the pKa of the acid and the bulk properties of a solvent, but also the weak interactions between all molecules in solution.

  • Hybrid nanophotonic-nanomagnonic SiC-YiG quantum sensor: I/theoretical design and properties

    Jérôme Tribollet
    European Physical Journal: Applied Physics, 2020, 90 (2), pp.20102. ⟨10.1051/epjap/2020200062⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Here I present the theory of a new hybrid paramagnetic-ferrimagnetic SiC-YiG quantum sensor. It is designed to allow sub-nanoscale single external spin sensitivity optically detected pulsed electron electron double resonance spectroscopy, using an X band pulsed EPR spectrometer and an optical fiber. The sensor contains one single V2 negatively charged silicon vacancy color center in 4H-SiC, whose photoluminescence is waveguided by a 4H-SiC nanophotonic structure towards an optical fiber. This V2 spin probe is created by ion implantation at a depth of few nanometers below the surface, determined by optically detected paramagnetic resonance under the strong magnetic field gradient of a YiG ferrimagnetic nanostripe located on the back-side of the nanophotonic structure. This gradient also allow the study, slice by slice at nanoscale, of the target paramagnetic sample. The fabrication process of this quantum sensor, its magnetic and optical properties, its external spins sensing properties in a structural biology context, and its integration to a standard commercially available pulsed EPR spectrometer are all presented here.

  • Infrared and 2-Dimensional Correlation Spectroscopy Study of the Effect of CH3NH3PbI3 and CH3NH3SnI3 Photovoltaic Perovskites on Eukaryotic Cells

    Luca Quaroni, Iness Benmessaoud, Bertrand Vileno, Endre Horváth, László Forró
    Molecules, 2020, 25 (2), pp.336. ⟨10.3390/molecules25020336⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    We studied the effect of the exposure of human A549 and SH-SY5Y cell lines to aqueous solutions of organic/inorganic halide perovskites CH3NH3PbI3 (MAPbI3) and CH3NH3SnI3 (MASnI3) at the molecular level by using Fourier transform infrared microspectroscopy. We monitored the infrared spectra of some cells over a few days following exposure to the metals and observed the spectroscopic changes dominated by the appearance of a strong band at 1627 cm−1. We used Infrared (IR) mapping to show that this change was associated with the cell itself or the cellular membrane. It is unclear whether the appearance of the 1627 cm−1 band and heavy metal exposure are related by a direct causal relationship. The spectroscopic response of exposure to MAPbI3 and MASnI3 was similar, indicating that it may arise from a general cellular response to stressful environmental conditions. We used 2D correlation spectroscopy (2DCOS) analysis to interpret spectroscopic changes. In a novel application of the method, we demonstrated the viability of 2DCOS for band assignment in spatially resolved spectra. We assigned the 1627 cm−1 band to the accumulation of an abundant amide or amine containing compound, while ruling out other hypotheses. We propose a few tentative assignments to specific biomolecules or classes of biomolecules, although additional biochemical characterization will be necessary to confirm such assignments

  • Synthesis and In Vitro Studies of a Gd(DOTA)–Porphyrin Conjugate for Combined MRI and Photodynamic Treatment

    Sébastien Jenni, Celia ́ Bonnet, Frédéric Bolze, Agnes A. Pallier, Angélique Sour, Éva Tóth, Barbara Ventura, Valérie Heitz
    Inorganic Chemistry, 2020, 59 (19), pp.14389-14398. ⟨10.1021/acs.inorgchem.0c02189⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    With the aim of developing new molecular theranostic agents, a π-extended Zn(II) porphyrin as photosensitizer for photodynamic therapy (PDT) linked to two GdDOTA-type complexes for magnetic resonance imaging (MRI) detection was synthesized. The relaxivity studies revealed a much higher relaxivity value per Gd ion for this medium sized molecule (19.32 mM–1 s–1 at 20 MHz and 298 K) compared to clinical contrast agents—a value which strongly increases in the presence of bovine serum albumin, reaching 25.22 mM–1 s–1. Moreover, the photophysical studies showed the strong ability of the molecule to absorb light in the deep red (670 nm, ε ≈ 60000 M–1 cm–1) and in the near-infrared following two-photon excitation (920 nm, σ2 ≈ 650 GM). The conjugate is also able to generate singlet oxygen, with a quantum yield of 0.58 in DMSO. Promising results were obtained in cellular studies, demonstrating that the conjugate is internalized in HeLa cells at micromolar concentration and leads to 70% of cell death following 30 min irradiation at 660 nm. These results confirm the potential of the designed molecule as an imaging and therapeutic agent.

  • Silver(I) and Nickel(II) Complexes with Oxygen‐ or Nitrogen‐Functionalized NHC Ditopic Ligands and Catalytic Ethylene Oligomerization

    Xiaoyu Ren, Marcel Wesolek, Corinne Bailly, Lydia Karmazin, Pierre Braunstein
    European Journal of Inorganic Chemistry, 2020, 2020 (11-12), pp.1073-1087. ⟨10.1002/ejic.201901064⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Potentially bidentate ditopic ligands containing a N-heterocyclic carbene (NHC) donor associated with an ether or an amine have been prepared and coordinated to NiII centers. The influence of the length of the alkyl chain, –(CH2)2– or –(CH2)3– connecting the ether or the amine group to the heterocycle was examined. In the analogous AgI complexes [Ag{Im(Dipp)(C3OMe)-κ1CNHC}2]Cl (8), 9 and 10, in the neutral NiII complexes with a C3 spacer trans-[NiCl2{Im(Dipp)(C3OMe)-κ1CNHC}2] (5a), 6, and 7, and in the cationic cis-[Ni{Im(Dipp)(C3OMe)-κ1CNHC}2(NCMe)2](PF6)2 (15) and cis-[Ni{Im(Mes)(C3OMe)-κ1CNHC}2(NCMe)2](PF6)2 (16), the ligand is monodentate. [(ImH)(Dipp)(C3OMe)][NiX3{Im(Dipp)(C3OMe)-κ1CNHC}] (14a, X = Cl) and (14b, X = Br) are rare examples of complexes of the type [NiX3(NHC)]–. For comparison, [NiBr2{(Im)(Dipp)(C2NMe2)-κ2,CNHC,Namine}] (24) and [NiBr2{(Im)(Dipp)(C3NMe2)-κ2,CNHC,Namine}] (25) contain a six- or a seven-membered κ2CNHC,Namine chelate, respectively. Various NiII complexes were evaluated as precatalysts for ethylene oligomerization. The structures of the carbene (Dipp)(C3OMe)imidazole-ylidene (4) and of the complexes 5a, 7, 8, [(ImH)(Dipp)(C3OMe)]2[NiCl4] (11a), [(ImH)(Dipp)(C3OMe)]2[NiBr4] (11b), [(ImH)(Me)(C3OMe)]2[NiCl4] (13), 14b, 16·NCMe, [Im(H){C(Me)(=NDipp)}(C3OMe)]2 [NiCl4] (18), [AgCl{Im[C(Me)=NDipp](C3OMe)}-κ1CNHC] (19), [AgCl{Im(Dipp)(C3NMe2)-κ1CNHC}] (23), 24, 25 and trans-[NiCl2{Im(Dipp){CH2CH2C(O)OEt}}2] were analyzed by X-ray diffraction

  • Novel intact polar and core lipid compositions in the Pyrococcus model species, P. furiosus and P. yayanosii, reveal the largest lipid diversity amongst Thermococcales

    Maxime Tourte, Vanessa Kuentz, Philippe Schaeffer, Vincent Grossi, Anaïs Cario, Phil M. Oger
    Biomolecules, 2020, 10 (6), pp.830. ⟨10.3390/biom10060830⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Elucidating the lipidome of Archaea is essential to understand their tolerance to extreme environmental conditions. Previous characterizations of the lipid composition of Pyrococcus species, a model genus of hyperthermophilic archaea belonging to the Thermococcales order, led to conflicting results, which hindered the comprehension of their membrane structure and the putative adaptive role of their lipids. In an effort to clarify the lipid composition data of the Pyrococcus genus, we thoroughly investigated the distribution of both the core lipids (CL) and intact polar lipids (IPL) of the model Pyrococcus furiosus and, for the first time, of Pyrococcus yayanosii, the sole obligate piezophilic hyperthermophilic archaeon known to date. We showed a low diversity of IPL in the lipid extract of P. furiosus, which nonetheless allowed the first report of phosphatidyl inositol-based glycerol mono-and trialkyl glycerol tetraethers. With up to 13 different CL structures identified, the acid methanolysis of Pyrococcus furiosus revealed an unprecedented CL diversity and showed strong discrepancies with the IPL compositions reported here and in previous studies. By contrast, P. yayanosii displayed fewer CL structures but a much wider variety of polar heads. Our results showed severe inconsistencies between IPL and CL relative abundances. Such differences highlight the diversity and complexity of the Pyrococcus plasma membrane composition and demonstrate that a large part of its lipids remains uncharacterized. Reassessing the lipid composition of model archaea should lead to a better understanding of the structural diversity of their lipidome and of their physiological and adaptive functions.

  • Two distinct amphipathic peptide antibiotics with systemic efficacy

    Jayaram Lakshmaiah Narayana, Biswajit Mishra, Tamara Lushnikova, Qianhui Wu, Yashpal S. Chhonker, Yingxia Zhang, D. Zarena, Evgeny Salnikov, Xiangli Dang, Fangyu Wang, Caitlin Murphy, Kirk W. Foster, Santhi Gorantla, Burkhard Bechinger, Daryl J. Murry, Guangshun Wang
    Proceedings of the National Academy of Sciences of the United States of America, 2020, 117 (32), pp.19446-19454. ⟨10.1073/pnas.2005540117⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Antimicrobial peptides are important candidates for developing new classes of antibiotics because of their potency against antibiotic-resistant pathogens. Current research focuses on topical applications and it is unclear how to design peptides with systemic efficacy. To address this problem, we designed two potent peptides by combining database-guided discovery with structure-based design. When bound to membranes, these two short peptides with an identical amino acid composition can adopt two distinct amphipathic structures: A classic horizontal helix (horine) and a novel vertical spiral structure (verine). Their horizontal and vertical orientations on membranes were determined by solid-state 15N NMR data. While horine was potent primarily against gram-positive pathogens, verine showed broad-spectrum antimicrobial activity. Both peptides protected greater than 80% mice from infection-caused deaths. Moreover, horine and verine also displayed significant systemic efficacy in different murine models comparable to conventional antibiotics. In addition, they could eliminate resistant pathogens and preformed biofilms. Significantly, the peptides showed no nephrotoxicity to mice after intraperitoneal or intravenous administration for 1 wk. Our study underscores the significance of horine and verine in fighting drug-resistant pathogens.

  • Antiferromagnetic coupling in copper(II)porphyrin dimers linked by copper(II) or palladium(II) ion

    Mary-Ambre Carvalho, Hervé Dekkiche, Sébastien Richeter, Corinne Bailly, Lydia Karmazin, Declan Mckearney, Daniel Leznoff, Guillaume Rogez, Bertrand Vileno, Sylvie Choua, Romain Ruppert
    Journal of Porphyrins and Phthalocyanines, 2020, 24 (01n03), pp.238-246. ⟨10.1142/S1088424619501037⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    The synthesis of porphyrin dimers linked by metal ions is described and the X-ray structure of two new dimers is presented. As previously shown for diamagnetic metal ions, strong electronic interactions between the individual subunits were observed. Antiferromagnetic coupling between copper(II) porphyrins linked by palladium(II) or copper(II) ion was studied by EPR and SQUID measurements. For the palladium(II) linked dimer, the very small antiferromagnetic coupling was estimated by EPR measurements (J <-1 cm-1). For the trinuclear copper(II) linked dimer, a large antiferromagnetic coupling between the copper(II) ions was measured. In this trinuclear compound, the linking copper(II) ion is used as a relay to increase the interaction between the two copper(II)porphyrins.

  • Anagostic Interactions in Alkyl-Fluorenyl-Substituted N‐Heterocyclic Carbene Complexes of Palladium(II)

    Hamzé Almallah, Eric Brenner, Dominique Matt, Mohamad Jahjah, Akram Hijazi, Christophe Gourlaouen
    Australian Journal of Chemistry, 2020, 73 (6), pp.579-585. ⟨10.1071/CH19608⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Two imidazolylidene (Im) complexes of the general formula trans-[PdX2(Im)(pyridine)] (X = Cl (2), Br (3)), in which the N-heterocyclic carbene ligand has one of its nitrogen atoms substituted by a bulky 9-propyl-9-fluorenyl group (PrF), have been prepared and fully characterised by spectroscopic methods and single-crystal X-ray structure analyses. In the solid state, the Im ring plane and the coordination plane of each complex are nearly orthogonal, thereby minimising the steric interactions between the N-substituents and the halide atoms. In both structures two methylenic C–H bonds sit near the dz2 axis point to the palladium atom, resulting in CH⋯Pd separations of 2.58/2.95 Å in 2 and 2.74/2.74 Å in 3. NMR measurements and DFT calculations indicate that these methylene groups are involved in anagostic CH⋯M interactions but not in significant H⋯X bonding.

  • SMM-ET: An SMM Evaluation Tool for the Quantitative Treatment of Ac Susceptibility and Magnetic Hysteresis Data

    Athanassios K Boudalis
    Quantum Materials Research, 2020, ⟨10.20900/qmr20200004⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Ac susceptometry and magnetic hysteresis studies are the two most used techniques for the basic characterization of magnetic relaxation properties of Single-Molecule Magnets. Nevertheless, the full quantitative treatment of such studies is rarely carried out, in particular as regards the absolute magnitudes of the in-phase (χʹ) and out-of-phase (χʺ) ac susceptibility signals, and the exact shapes of hysteresis loops. To facilitate such quantitative analyses, an SMM evaluator tool has been developed. It uses the dc magnetic susceptibility/magnetization properties of any SMM, and the parameters characteristic of the various relevant relaxation processes (Orbach, Raman, Direct, QTM) to calculate the exact ac susceptibility/magnetic hysteresis curves under any temperature, magnetic field and ac frequency or dc field scan rate. It also implements a model that calculates the actual fraction of molecules that contribute to the SMM effect, as well as models which account for distributions of the relaxation times. Indicative examples of a "strong", a "medium" and a "weak" SMM are analysed with this tool, demonstrating the additional information that can be extracted by quantitative treatment of such data.

  • Skin sensitisation to fragrance hydroperoxides: interplay between dendritic cells, keratinocytes and free radicals

    J. Lichter, M. Silva E Sousa, N. Peter, F. Sahli, B. Vileno, S. Kuresepi, C. Gourlaouen, Elena Gimenez-Arnau, Brunhilde Blömeke
    British Journal of Dermatology, In press, ⟨10.1111/bjd.19685⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Background: Skin sensitisation to hydroperoxides (R‐OOHs) of the commonly used fragrance terpenes limonene, linalool and citronellol is frequently reported. R‐OOHs are believed to initiate the process leading to sensitisation and allergic contact dermatitis (ACD) through mechanisms involving radical intermediates. Thus, radical intermediates, keratinocytes and dendritic cells (DC) may act in concert to initiate the process. Objectives:To evaluate individual DC activation profiles in the context of keratinocytes by R‐OOHs with regard to frequency, specificity and magnitude of upregulation. Methods: 2D and 3D cocultures with keratinocytes/reconstructed human epidermis (RHE) and DC to evaluate cell surface levels of the costimulatory molecules CD86, CD80 and the adhesion molecule CD54 on cocultured DC. Analysis of radical formation from limonene hydroperoxides in RHE by EPR‐ST. Results: R‐OOHs induce donor‐dependent DC activation. Major differences were found between the limonene‐OOHs. Limonene‐1‐OOH was stronger with respect to both, frequency and magnitude of responses. Using a 3D coculture model, no DC activation was detected after topical application of 0.2% limonene‐OOHs (20 µg/cm2), while 1.2% limonene‐1‐OOH or 2% limonene‐2‐OOH induced DC activation. Furthermore, we demonstrated differences in the formed carbon and oxygen radicals from the limonene‐OOHs using RHE, mimicking what may happen in vivo. Conclusions: We report clear individual differences in DC maturation by the most important hydroperoxides. Both, response rates and magnitude of response indicate that very small structural alterations in the hydroperoxides are translated into specific DC responses. In addition, we provide more insights into the amounts of hydroperoxides that are able to activate DC and induce sensitisation.

  • Optimizing Group Transfer Catalysis by Copper Complex with Redox-Active Ligand in an Entatic State

    Yufeng Ren, Jeremy Forte, Khaled Cheaib, Nicolas Vanthuyne, Louis Fensterbank, Hervé Vezin, Maylis Orio, Sébastien Blanchard, Marine Desage-El Murr
    iScience, 2020, 23 (3), pp.UNSP 100955. ⟨10.1016/j.isci.2020.100955⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Metalloenzymes use earth-abundant non-noble metals to perform high-fidelity transformations in the biological world. To ensure chemical efficiency, metalloenzymes have acquired evolutionary reactivity-enhancing tools. Among these, the entatic state model states that a strongly distorted geometry induced by ligands around a metal center gives rise to an energized structure called entatic state, strongly improving the reactivity. However, the original definition refers both to the transfer of electrons or chemical groups, whereas the chemical application of this concept in synthetic systems has mostly focused on electron transfer, therefore eluding chemical transformations. Here we report that a highly strained redox-active ligand enables a copper complex to perform catalytic nitrogen- and carbon-group transfer in as fast as 2 min, thus exhibiting a strong increase in reactivity compared with its unstrained analogue. This report combines two reactivity-enhancing features from metalloenzymes, entasis and redox cofactors, applied to group-transfer catalysis.

  • Joint Isotherm Calorimetric Titration–DFT Investigation of the Demethoxy-Amination of Fischer Carbenes

    Milan Milovanović, Snežana Zarić, Yann Cornaton, Jean-Pierre Djukic
    Journal of Organometallic Chemistry, 2020, 929, pp.121582. ⟨10.1016/j.jorganchem.2020.121582⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    The thermochemistry of the aminolysis of three methoxy Fischer carbenes, pentacarbonyl(phenylmethoxyalkylidene)chromium(0), molybdenum(0) and tungsten(0), was studied experimentally and theoretically with three amines, namely benzylamine, aniline and 3-pyrroline. Enthalpies of reactions were all determined by Isotherm Calorimetric Titration (ITC) in chlorobenzene at 298.15 K, which provided in almost all cases values of ΔrH larger than -15 kcal/mol suggesting energetically favourable transformations for all amines except aniline. No significant dependence of the enthalpy of reaction upon the nature of the metal atom of the carbene complex was found. Further ITC experiments confirmed the partial second-order reaction in amine. All COSMO-DFT computed enthalpies of reaction (spanning ca. -5.5 kcal/mol up to -20 kcal/mol) were found to be in excellent agreement with experimental values, while calculated Gibbs free energies suggested spontaneous processes for all reactions except the one with aniline.

  • High performance direct borohydride fuel cell using bipolar interfaces and noble metal-free Ni-based anodes

    Guillaume Braesch, Zhongyang Wang, Shrihari Sankarasubramanian, Alexandr Oshchepkov, Antoine Bonnefont, Elena R Savinova, Vijay Ramani, Marian Chatenet
    Journal of Materials Chemistry A, 2020, 8, pp.20543 - 20552. ⟨10.1039/D0TA06405J⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Due to its unmatched theoretical voltage of 2.18 V, direct alkaline fuel cell using sodium borohydride solution at the anode and hydrogen peroxide at the cathode, represents a promising power source for high energy density applications. However, its development faces several challenges. Here we demonstrate a BH4-/H2O2 direct borohydride fuel cell (DBFC) with a platinum group metal (PGM)-free anode, which delivers unprecedented combination of 2.0 V open-circuit voltage and peak power density of 446 mW cm-2. This exceptionally high cell voltage is enabled by combining a pH-gradient-enabled microscale bipolar interface (PMBI), a Ni anode obtained by electrodeposition of Ni nanoparticles on an electrochemically-etched Ni felt (eNFT), and a specially-designed simple but efficient coating procedure to deposit anion-exchange ionomer on the anode surface. The PMBI efficiently separates the drastically-disparate pH of the anolyte and the catholyte, the NiED/eNFT anode provides high surface area for efficient electrocatalysis and open porosity for fast mass-transport, while the coating procedure allows preserving Ni in metallic state, the latter being prerequisite for high anode performance. This work details how such fully nickel-based anodes are obtained and demonstrates why their BOR activity and stability outperforms that of PGM-based anodes.

  • Non symmetrical sterically challenged phenanthroline ligands and their homoleptic copper(I) complexes with improved excited state properties

    Lea Gimeno, Errol Blart, Jean-Noël Rebilly, Marina Coupeau, Magali Allain, Thierry Roisnel, Alexis Quarré de Verneuil, Christophe Gourlaouen, Chantal Daniel, Yann Pellegrin
    Chemistry - A European Journal, 2020, 26 (51), pp.11887-11899. ⟨10.1002/chem.202001209⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    A strategy is presented to improve the excited state reactivity of homoleptic copper-bis(diimine) complexes CuL by increasing the steric bulk around Cu whereas preserving their stability. Substituting the phenanthroline at the 2-position by a phenyl group allows the implementation of stabilizing intramolecular π stacking within the copper complex, whereas tethering a branched alkyl chain at the 9-position provides enough steric bulk to rise the excited state energy E . Two novel complexes are studied and compared to symmetrical models. The impact of breaking the symmetry of phenanthroline ligands on the photophysical properties of the complexes is analyzed and rationalized thanks to a combined theoretical and experimental study. The importance of fine-tuning the steric bulk of the N-N chelate in order to stabilize the coordination sphere is demonstrated. Importantly, the excited state reactivity of the newly developed complexes is improved as demonstrated in the frame of a reductive quenching step, evidencing the relevance of our strategy.

  • Computational studies of Ni(II) photosensitizers complexes containing 1,1′-bis(diphenylphosphino)ferrocene and dithio ligands

    Sefia Brahim, Houari Brahim, Stéphane Humbel, Ali Rahmouni
    Canadian Journal of Chemistry, 2020, 94 (4), pp.194-203. ⟨10.1139/cjc-2019-0168⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Detailed theoretical studies of Ni(II) complexes in a distorted square planar form and containing dithio and (P,P) chelating ligands were performed. These Ni(II) complexes are investigated for their use in dye-sensitized solar cells (DSSC). Structures and UV-Vis spectra are calculated at density functional theory (DFT) and time-dependent density functional theory (TD-DFT) theories using B3LYP and CAM-B3LYP functionals and 6-31G(d,p) and 6-31G+(d) basis set. Geometry optimizations result in excellent agreement with the experimental results. Moreover, the analysis of the frontier molecular orbitals (FMOs) allowed a detailed assignment and a clear analysis of the electronic transitions. The TD-DFT calculations reproduce the main spectroscopic properties observed and substituent effects. The results reveal that all absorption spectra are characterized by mixed character mainly dominated by metal to ligand and ligand to ligand charge transfer (MLCT and LLCT). We unveil how the substituent variations affect the DSSCs features of the complexes.

  • Quantitative and specific recovery of natural organic and mineral sulfur for (multi-)isotope analysis

    I. Jovovic, V. Grossi, Pierre Adam, L. Simon, I. Antheaume, F. Gelin, M. Ader, P. Cartigny
    Organic Geochemistry, 2020, 146, pp.104055. ⟨10.1016/j.orggeochem.2020.104055⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Deciphering the role of sulfur in biogeochemical cycles strongly relies on its stable isotope composition, which ultimately depends on the ability to quantitatively recover different sulfur species from geological samples. For decades most studies have been restricted to the 34S/32S composition of bulk samples, using simple methods based on the analysis of SO2 released by sample combustion combined to mass spectrometry. The wet chemistry procedures required to selectively extract specific sulfur species were generally avoided due to their tediousness and inefficiency for some complex matrices, especially when targeting organic sulfur. With the recent advent of multi-isotope studies (investigating the minor sulfur stable isotopes 33S and 36S) which rely either on the analysis of sulfur as SF6, or on the use of secondary ion or multi-collector inductively coupled plasma mass spectrometry, wet chemistry-based preparation procedures were brought back to the stage with a renewed interest in developing procedures better adapted to the investigation of specific sulfur species. Here we propose a new stepwise chemical procedure for the quantitative recovery and multi-isotope analysis of organic sulfur from both solvent soluble (total lipid extract) and insoluble (kerogen) fractions, based on a wet oxidation by sodium hypochlorite. This procedure also allows the multi-isotope analysis of inorganic sulfur species (elemental sulfur, sulfates and sulfides) in the same sample. Its application to different well-known petroleum source rocks and to an oil demonstrates its relevance for disentangling the interactions between the different sulfur pools and for shedding new light on the sulfur biogeochemical cycle.

  • Recent Applications in the Use of Sulfoxides as Chiral Auxiliaries for the Asymmetric Synthesis of Natural and Biologically Active Products

    Xavier Salom-Roig, Claude Bauder
    Synthesis: Journal of Synthetic Organic Chemistry, 2020, 52 (07), pp.964-978. ⟨10.1055/s-0039-1690803⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    The contribution of chiral sulfoxides as versatile auxiliaries in the field of organic chemistry has shown a prevalent interest in the asymmetric synthesis of natural products during the last 45 years. In this short review, we report the recent applications of these chiral auxiliaries to the synthesis of natural and biological active products highlighted from 2010 to 2019. We hope to allow the reader to have an overview of the potential of sulfoxide chemistry in the field of enantio­selective synthesis. 1 Introduction 2 Diastereoselective Additions to Ketones 2.1 Reduction of β-Keto Sulfoxides 2.2 Reduction of β-Keto Sulfoxides Followed by Bromohydrin Forma tion 3 Synthesis of an α-Amino α′-Sulfinyl Ketone Followed by Diastere oselective Reduction of the β-Keto Sulfoxide 4 Diastereoselective Addition of Carbanionic Chiral Sulfoxides 4.1 Addition to an Aldehyde 4.1.1 Aldol Reactions 4.1.2 Reformatsky-Type Reactions 4.2 Additions to Chiral Sulfinimines 5 Diastereoselective Cyclization Reactions Directed by a Chiral Sulf oxide 5.1 1,4-Radical Additions 5.2 Intramolecular Conjugate Additions 5.3 Nazarov Cyclizations 5.4 Diels–Alder Reactions 6 Atropodiastereoselective Synthesis 7 Conclusion

  • Vibrational coherence and quantum yield of retinal-chromophore-inspired molecular switches

    Moussa Gueye, Marco Paolino, Etienne Gindensperger, Stefan Haacke, Jérémie Léonard, Massimo Olivucci
    Faraday Discussions, 2020, ⟨10.1039/c9fd00062c⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    UV-Vis transient absorption (TA) spectroscopy is used to carry out a systematic investigation of the ultrafast C]C double photoisomerization dynamics and quantum yield of each isomer of a set of six chromophores based on the same retinal-inspired, indanylidene pyrrolinium (IP) molecular framework. All compounds undergo a sub-picosecond photoisomerization, and can be categorized within two photoisomerization scenarios. Scenario I corresponds to compounds which display the signatures of a vibrationally coherent reactive motion through the conical intersection, with different degrees of vibrational coherence. Qualitatively distinct TA signatures are observed for other compounds which are therefore proposed to obey scenario II, referring to an intermediate regime between scenario I and a thermally-equilibrated, fully stochastic photoreaction. Remarkably, the photoisomerization scenario is observed to correlate with the computed distortion from planarity of the ground state equilibrium geometry, reflecting the torsional strain that would be released after photoexcitation. The most planar compounds-i.e. those having a C]C double bond pre-twist of less than 10-obey scenario II, while compounds obeying scenario I have larger pre-twists. The most pre-twisted compounds (&gt;15) show pronounced oscillatory signatures of a reaction-induced, low-frequency vibrational wavepacket observed in the S 0 photoproduct and assigned to the torsion mode of the reaction coordinate, thus mimicking the vibrationally coherent photoisomerization dynamics of the rhodopsin protein. Importantly, the systematic comparison of all photoisomerization quantum yields does however not reveal any correlation with observables such as excited state life time, vibrational coherence, absorption wavelengths or degree of pre-twisting.

  • A terbium(III) luminescent ATCUN-based peptide sensor for selective and reversible detection of copper(II) in biological media

    Enrico Falcone, Paulina Gonzalez, Lucie Lorusso, Olivier Sénèque, Peter Faller, Laurent Raibaut
    Chemical Communications, 2020, 56 (35), pp.4797-4800. ⟨10.1039/D0CC01007C⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    The measurement of exchangeable Cu2+ levels in biological samples is gaining interest in the context of copper-related pathologies. Here, we report a Tb3+ luminescent turn-off sensor for Cu2+ based on the specific and suitable-affinity Xxx-Zzz-His (ATCUN) peptide motif, enabling Cu2+ detection in the presence of a biological fluorescent background.

  • Tetra-(benzo-24-crown-8)-phthalocyanines as a platform for supramolecular ensembles: Synthesis and interaction with viologen

    Evgeniya A. Safonova, Jennifer A. Wytko, Jean Weiss, Elena A. Ugolkova, Nikolay N. Efimov, Vadim V. Minin, Yulia G. Gorbunova, Aslan Yu. Tsivadze
    Journal of Porphyrins and Phthalocyanines, 2020, 24 (09), pp.1083-1092. ⟨10.1142/S1088424620500297⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    The synthesis of a series of novel tetra-(benzo-24-crown-8)-phthalocyanines (Mg(II), Ni(II), Co(II)) as well as a modified procedure for the free-base ligand and its Zn(II) and Cu(II) complexes are reported. The tendency of these phthalocyanines to undergo supramolecular cofacial dimerization induced by interaction with a viologen (N,N-di(but-3-ynyl)-4,4’-bipyridinium) was investigated by UV-Vis absorption and EPR spectral studies in solution. The nature of the metal cation in phthalocyanine, the concentration, as well as the solvent all influenced the assembly processes.

  • Acetate-catalyzed hydroboration of CO 2 for the selective formation of methanol-equivalent products

    Yuri C. A. Sokolovicz, Olalla Nieto Faza, David Specklin, Béatrice Jacques, Carlos Silva López, João dos Santos, Henri Schrekker, Samuel Dagorne
    Catalysis Science & Technology, 2020, 10 (8), pp.2407-2414. ⟨10.1039/d0cy00118j⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    The present study details the use of the acetate anion, an inexpensive and robust anion, as a CO2 hydroboration catalyst for the selective formation, in most cases, of methanol-equivalent borane products. Thus, upon heating (90 °C, PhBr), tetrabutylammonium, sodium and potassium acetate (1, 2 and 3, respectively) effectively catalyze CO2 hydroboration by pinacolborane (pinB–H) to afford CO2 reduction products HOCOBpin (A), pinBOCH2OBpin (B) and methoxyborane (C). In most cases, high selectivity for product C with higher borane loading and longer reaction time with a TON of up to 970 was observed. The reduction catalysis remains efficient at low catalyst loading (down to 0.1 mol%) and may also be performed under solvent-free conditions using salt 1 as a catalyst, reflecting the excellent robustness and stability of the acetate anion. In control experiments, a 1/1 1/pinB–H mixture was found to react fast with CO2 at room temperature to produce formate species [pinB(O2CH)(OAc)][N(nBu)4] (5) through CO2 insertion into the B–H bond. DFT calculations were also performed to gain insight into the acetate-mediated CO2 hydroboration catalysis, which further supported the crucial role of acetate as a Lewis base in CO2 functionalization catalysis by pinB–H. The DFT-estimated mechanism is in line with experimental data and rationalizes the formation of the most thermodynamically stable reduction product C through acetate catalysis.

  • One-pot controlled reduction of conjugated amides by sequential double hydrosilylation catalyzed by an iridium(III) metallacycle

    Yann Corre, Vincent Rysak, Márton Nagyházi, Dorottya Kalocsai, Xavier Trivelli, Jean-Pierre Djukic, Francine Agbossou-Niedercorn, Christophe Michon
    European Journal of Organic Chemistry, 2020, 2020 (39), pp.6212-6220. ⟨10.1002/ejoc.202001061⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    A single and accessible cationic iridium III metallacycle catalyzes effectively the one-pot sequential double hydrosilylation of challenging -unsaturated secondary and tertiary amides to afford in a controlled and straightforward way the corresponding reduced products, that is to say the related secondary and tertiary amides and amines. The catalytic hydrosilylations of the conjugated amides described herein proceeded in good yields and high chemoselectivities. The critical silyl enolate, in other words silyl ketene aminal intermediate, has been observed and characterized by using control experiments, mass spectrometry and state of the art Nuclear Magnetic Resonance analyses. The present achievements indicate a promising potential of catalysts based on metallacycles for future significant developments in one-pot multicatalytic synthesis and therefore the production of highly functionalized and complex organic molecules.

  • Copper-binding motifs Xxx-His or Xxx-Zzz-His (ATCUN) linked to an antimicrobial peptide: Cu-binding, antimicrobial activity and ROS production

    Merwan Bouraguba, Elise Glattard, Maxime Naudé, Rémi Pelletier, Christopher Aisenbrey, Burkhard Bechinger, Laurent Raibaut, Vincent Lebrun, Peter Faller
    Journal of Inorganic Biochemistry, 2020, 213, pp.111255. ⟨10.1016/j.jinorgbio.2020.111255⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Depending on the coordination, copper ions can have a very high activity in catalyzing the production of reactive oxygen species. Thus interest arose in increasing the activity of antimicrobial peptides (AMPs) by equipping them with a Cu-binding unit. Several examples, native and engineered, have been investigated with the motif Xxx-Zzz-His, called Amino Terminal Cu(II)- and Ni(II)-binding (ATCUN) motif. Here we investigate a short AMP that was equipped either with Xxx-Zzz-His or Xxx-His. Xxx-His is a shorter motif and yields a more redox active copper complex. The control AMP, Xxx-His-AMP and Xxx-Zzz-His-AMP were investigated toward Cu-binding, Reactive Oxygen Species (ROS) production and antimicrobial activity in E. coli. The data indicate that these Cu-binding motifs have very limited impact on antimicrobial activity and low ROS production capability.

  • A Bis‐Acridinium Macrocycle as Multi‐Responsive Receptor and Selective Phase Transfer Agent of Perylene

    Johnny Hu, Jas S Ward, Alain Chaumont, Kari Rissanen, Jean-Marc Vincent, Valerie Heitz, Henri-Pierre Jacquot de Rouville
    Angewandte Chemie International Edition, In press, 59, pp.23206-23212. ⟨10.1002/anie.202009212⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    A bis-acridinium cyclophane incorporating switchable acridinium moieties linked by a 3,5-dipyridylanisole spacer was studied as a multi-responsive host for polycyclic aromatic hydrocarbon guests. Complexation of perylene was proven to be the most effective and was characterized in particular by a charge transfer band as signal output. Effective catch and release of the guest was triggered by both chemical (proton/hydroxide) and redox stimuli. Moreover, the dicationic host was also easily switched between organic and perfluorocarbon phases for application related to the enrichment of perylene from a mixture of polycyclic aromatic hydrocarbons.

  • Tertiary Enamides as Versatile and Valuable Substrates to Reach Chemical Diversity

    Frederic Beltran, Laurence Miesch
    Synthesis: Journal of Synthetic Organic Chemistry, 2020, 52 (17), pp.2497-2511. ⟨10.1055/s-0040-1707403⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Tertiary enamides display versatile reactivity and great stability compared to their enamine congeners. This review covers progress made in the development of new methods involving the enaminic reactivity of tertiary enamides with respect to the synthesis of complex nitrogen-containing compounds. A focus on the preparation of biologically active molecules is also presented. The syntheses reported herein are classified based on their reaction type. In addition, mechanistic insights are given for most of the new transformations.

  • The Glutathione/Metallothionein System Challenges the Design of Effient O2‐Activating Copper Complexes

    Alice Santoro, Jenifer S. Calvo, Manuel David Peris‐díaz, Artur Krężel, Gabriele Meloni, Peter Faller
    Angewandte Chemie International Edition, 2020, 59 (20), pp.7830-7835. ⟨10.1002/anie.201916316⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Copper complexes are of medicinal and biological interest, including as anticancer drugs designed to cleave intracellular biomolecules by O2 activation. To exhibit such activity, the copper complex must be redox active and resistant to dissociation. Metallothioneins (MTs) and glutathione (GSH) are abundant in the cytosol and nucleus. Because they are thiol-rich reducing molecules with high CuI affinity, they are potential competitors for a copper ion bound in a copper drug. Herein, we report the investigation of a panel of CuI /CuII complexes often used as drugs, with diverse coordination chemistries and redox potentials. We evaluated their catalytic activity in ascorbate oxidation based on redox cycling between CuI and CuII , as well as their resistance to dissociation or inactivation under cytosolically relevant concentrations of GSH and MT. O2 -activating CuI /CuII complexes for cytosolic/nuclear targets are generally not stable against the GSH/MT system, which creates a challenge for their future design.

  • Les géosciences au service de l’archéologie agraire. Une étude de cas sur les rideaux de culture de Goldbach (68)

    Dominique Schwartz, Vincent Robin, Pierre Adam, Philippe Schaeffer, Anne Gebhart, Pierre Alexis Herrault, Benjamin Keller, Danièle Dapiaggi, Claire Stevenel, Maxime Thiss, Martine Trautmann, Ertlen Damien
    Archimède : archéologie et histoire ancienne, 2020, 7, pp.205-216. ⟨10.47245/archimede.0007.act.08⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Les rideaux de culture sont des talus qui se forment involontairement à l’amont d’une haie, par accumulation de colluvions érodés dans les champs. Ils peuvent constituer des parcellaires de très grande extension spatiale, caractérisés par des parcelles étroites, allongées perpendiculairement à la pente. L’histoire de ces parcellaires et leur datation sont encore très mal connues. Les résultats présentés ici concernent un parcellaire de plusieurs centaines d’hectares localisé à Goldbach-Altenbach, dans les Vosges haut-rhinoises. Les résultats obtenus sur deux coupes transversales à des rideaux de culture montrent que le parcellaire a été mis en place vers 900 AD, puis que la zone a été brièvement abandonnée pendant la Guerre de Trente Ans. La datation vers 900 AD suggère que ce parcellaire a été mis en place sous l’autorité de l’abbaye de Murbach. L’ensemble de la zone a en effet été donné à cette abbaye vers 800 AD.

  • Competing Molecular Packing of Blocks in a Lamella-Forming Carbohydrate- block -poly(3-hexylthiophene) Copolymer

    Yoko Sakai-Otsuka, Yoshiharu Nishiyama, Jean-Luc Putaux, Martin Brinkmann, Toshifumi Satoh, Wen-Chang Chen, Redouane Borsali
    Macromolecules, 2020, 53 (20), pp.9054-9064. ⟨10.1021/acs.macromol.0c01801⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    A molecular packing model of poly(3-hexylthiophene)-block-peracetylated maltopheptaose (P3HT-b-AcMal7) was proposed based on the X-ray and electron diffraction measurements. The P3HT and AcMal7 segments are confined in the lamellae in which the AcMal7 segments are aligned side by-side. The extended P3HT chain segments are tilted with respect to the lamellar plane and strongly π-stacked. This molecular arrangement results from a subtle balance between segregation strength of the P3HT and AcMal7 blocks, strong π–π interactions of the P3HT backbones, geometrical mismatch between two blocks, space filling requirement, and entropic penalties. The small-angle X-ray scattering (SAXS) analysis above the melting temperature of P3HT block indicates strong segregation strength between P3HT and AcMal7 blocks. Differential scanning calorimetry (DSC), Fourier-transform infrared (FT-IR) spectroscopy, and SAXS measurements underline the improved thermal stability of P3HT crystalline domains in the phase-separated P3HT-b-AcMal7.

  • Recycling Iron‐Containing Sludges from the Electroflocculation of Printing and Dyeing Wastewater into Anode Materials for Lithium‐Ion Batteries

    Gang Liu, Yiyao Shen, Peihua Ma, Sijia Zhao, Antoine Bonnefont, Yaokang Lv, Congze Wang, Laurent Ruhlmann, Cheng Zhang
    ChemSusChem, 2020, 13 (13), pp.3469-3478. ⟨10.1002/cssc.202000677⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Fe‐containing sludges DW/Fe were prepared by using electroflocculation treatment of printing and dyeing wastewater (DW) provided by a company. To further investigate the formation process and the properties of DW/Fe sludges and their application in anode materials of Li‐ion battery, the DW/Fe sludges prepared from industrial wastewater were compared to three other sludges MB/Fe, RB/Fe, Ta/Fe prepared from model solutions containing either methyl blue (MB), rhodamine B (RB) or tartrazine (Ta). Also, DW/Fe sludges were calcined at 500 ℃ in N2 atmosphere, to form iron oxide/carbon composite C‐DW/Fe. The composition and structure of the sludges and of the C‐DW/Fe composite were analyzed through FTIR, XRD, TGA, SEM, TEM and XPS, and their performances as anode of Li‐ion batteries were studied by adding different proportions of conductive agent (super P® conductive carbon black). Our results show that the sludges are a complex of Fe3O4 and organic matter. The specific capacity and stability can be improved during the charge‐discharge test by increasing the amount of carbon black. More importantly, this improvement is more pronounced on DW/Fe that does not require high temperature carbonization, which means sludges can not only protect the environment and avoid waste of resources, but also can be directly and widely used in decentralized energy storage devices.

  • A unique bacteriohopanetetrol stereoisomer of marine anammox

    Rachel Schwartz-Narbonne, Philippe Schaeffer, Ellen Hopmans, Margot Schenesse, E. Alex Charlton, D. Martin Jones, Jaap S Sinninghe Damsté, Muhammad Farhan Ul Haque, Mike S.M. Jetten, Sabine K. Lengger, J. Colin Murrell, Philippe Normand, Guylaine H.L. Nuijten, Helen Talbot, Darci Rush
    Organic Geochemistry, 2020, 143, pp.103994. ⟨10.1016/j.orggeochem.2020.103994⟩ | Publiée le 1 janvier 2020
    Article dans une revue

    Anaerobic ammonium oxidation (anammox) is a major process of bioavailable nitrogen removal from marine systems. Previously, a bacteriohopanetetrol (BHT) isomer, with unknown stereochemistry, eluting later than BHT when examined by high performance liquid chromatography (HPLC), was detected in ‘Ca. Scalindua profunda’ and proposed as a biomarker for anammox in marine paleo-environments. However, the utility of this BHT isomer as an anammox biomarker is hindered by the fact that four other, non-anammox, bacteria are also known to produce a late-eluting BHT stereoisomer. The stereochemistry in Acetobacter pasteurianus, Komagataeibacter xylinus and Frankia sp. was known to be 17b, 21b(H), 22R, 32R, 33R, 34R (BHT-34R). The stereochemistry of the late-eluting BHT in Methylocella palustris was unknown. To determine if marine anammox bacteria produce a unique BHT isomer, we studied the BHT distributions and stereochemistry of known BHT isomer producers and of previously unscreened marine (‘Ca. Scalindua brodeae’) and freshwater (‘Ca. Brocadia spp.’) anammox bacteria, using HPLC and gas chromatographiy (GC) analysis of acetylated BHTs and ultra high performance liquid chromatography (UHPLC)-high resolution mass spectrometry (HRMS) analysis of non-acetylated BHTs. The 34R stereochemistry was confirmed for the BHT isomers in Ca. Brocadia sp. and Methylocella palustris. However, ‘Ca. Scalindua spp.’ synthesises a stereochemically distinct BHT isomer, with still unconfirmed stereochemistry (BHT-x). Only GC analysis of acetylated BHT and UHPLC analysis of non-acetylated BHT distinguished between late-eluting BHT isomers. Acetylated BHT-x and BHT-34R co-elute when examined by HPLC. As BHT-x is currently only known to be produced by ‘Ca. Scalindua spp.’, it may be a biomarker for marine anammox.

  • Case studies of the radical cation reactivity in meso-aryl and octaethyl porphyrins

    Raphaël Lamare, Laurent Ruhlmann, Romain Ruppert, Jean Weiss
    Journal of Porphyrins and Phthalocyanines, 2019, ⟨10.1142/S1088424619501980⟩ | Publiée le 12 décembre 2019
    Article dans une revue

    The reactivity of porphyrin radical cationic species derived from octaethyl porphyrin (OEP) or meso-aryl porphyrins with nucleophiles, envisioned as an access route to elaborate porphyrin dimers, has been studied and optimized in the case of OEP. Standardized conditions have been applied to various spacers to show that the success of the reaction is mostly nucleophile dependent and that the method has little chances to yield non-linear bis-porphyrins.

  • Chemical Compounds Responsible for Skin Allergy to Complex Mixtures: How to Identify Them?

    Elena Giménez-Arnau
    Cosmetics and Toiletries, 2019, 6 (4), pp.71. ⟨10.3390/cosmetics6040071⟩ | Publiée le 1 décembre 2019
    Article dans une revue

    In the cosmetics industry, various natural complex mixtures such as botanical extracts or essential oils are used. In addition to that, finished consumer products may contain a number of constituents of natural origin but many products derived from organic synthesis too. Hence, finding skin sensitizers within this myriad of chemicals is an arduous task. Nowadays, methods validated by European dedicated instances to evaluate the allergenicity of chemicals are incapable to predict the sensitization potential of complex mixtures, even if research has progressed a lot in this direction recently. Accordingly and in this context, to identify precisely the culprit(s) responsible for skin sensitization to the mixtures is essential for risk assessment. This review is a short summary of approaches that allow identifying allergens in chemical mixtures such as bioassay-guided chemical fractionation, structure-activity relationships studies and recent methods allowing identification of reactive intermediates in natural extracts exposed to air oxidation. It is shown that a big progress has been accomplished, even if the identification of sensitizers in complex mixtures continues to be puzzling.

  • Supported Catalytically-Active Supramolecular Hydrogels for Continuous Flow Chemistry

    Jennifer Rodon Fores, Miryam Criado-Gonzalez, Alain Chaumont, Alain Carvalho, Christian Blanck, Marc Schmutz, Christophe Serra, Fouzia Boulmedais, Pierre Schaaf, Loïc Jierry
    Angewandte Chemie International Edition, 2019, ⟨10.1002/anie.201909424⟩ | Publiée le 1 décembre 2019
    Article dans une revue

    Inspired from biology, one current goal in supramolecular chemistry is to control the emergence of new functionalities arising from self-assembly of molecules. In particular, some peptides can self-assemble and lead to exceptional catalytically-active fibrous networks able to underpin hydrogels. Unfortunately, the mechanical fragility of these materials is incompatible with process developments relaying this exciting field to academic curiosity. Here, we show that this drawback can be circumvented using enzyme-assisted self-assembly of peptides initiated at the walls of a supporting porous material. We apply this strategy to grow an esterase-like catalytically-active supramolecular hydrogel (CASH) in an open-cell polymer foam, filling the whole interior space of it. Our so-supported-CASH is highly efficient toward inactivated esters and shows kinetic resolution of racemates. This hybrid material is robust enough to be used in continuous flow reactors, reusable and stable over months.

  • Evaluation of the stereoselectivity for titanium(IV)-based coordination entities induced by the enantiopure diphenylethene-1,2-diamine ligand

    Emilie Macker, Laurent Barloy, Alain Chaumont, Nathalie Kyritsakas, Bruno Vincent, Marc Henry, Pierre Mobian
    Inorganica Chimica Acta, 2019, 498, pp.119119. ⟨10.1016/j.ica.2019.119119⟩ | Publiée le 1 décembre 2019
    Article dans une revue

    This article describes the formation of neutral TiO 4 N 2-based coordination entities where the titanium centers are coordinated by oxygenated ligands incorporating one or two biphenolato units, i.e. L 1 and L 2 respectively. In these systems, the sixfold coordination spheres of each metallic center are completed by the enantiopure bi-dentate diphenylethene-1,2-diamine compound, abbreviated as dpeda. A solvent dependent diastereomeric ratio is evaluated by 1 H NMR for the monomeric [Ti(L 1) 2 ((1R,2R)-dpeda)] or [Ti(L 1) 2 ((1S,2S)-dpeda)] (abbreviated as [R-Ti] or [S-Ti] respectively) complexes. The highest diastereomeric ratio for [Ti(L 1) 2 (dpeda)] is obtained in chloroform (2 : 1). Energy calculation and circular dichroism spectra simulation, obtained by DFT, permit to assign the configuration of the stereoisomer formed in excess. The (1R,2R)-(+)-dpeda privileges the Δ form and (1S,2S)-(-)-dpeda the Λ form of the [Ti(L 1) 2 (dpeda)] stereoisomers. The helicates formulated as [Ti 2 (L 2) 2 ((1S,2S)-dpeda) 2 ] and [Ti 2 (L 2) 2 (1R,2R)-dpeda) 2 ] (abbreviated as [S-Ti2] or [R-Ti2] respectively) are obtained by following a multi-component self-assembly approach. In this case, the diastereomeric ratios evaluated by 1 H NMR are much lower compared to those determined for the monomeric species, and a privileged P and M configuration for the [Ti 2 (L 2) 2 (1R,2R)-dpeda) 2 ] helicate and the [Ti 2 (L 2) 2 ((1S,2S)-dpeda) 2 ] helicate respectively is assigned through theoretical calculations. Overall, this article describes a strategy to favour handedness in a helicate system where the chiral control is originated from a ligand that is not inscribed within the helical framework of the architecture.

  • Chiral Chalcogen Bond Donors Based on the 4,4′-Bipyridine Scaffold

    Robin Weiss, Emmanuel Aubert, Paola Peluso, Sergio Cossu, Patrick Pale, Victor Mamane
    Molecules, 2019, 24 (24), pp.4484. ⟨10.3390/molecules24244484⟩ | Publiée le 1 décembre 2019
    Article dans une revue

    Organocatalysis through chalcogen bonding (ChB) is in its infancy, as its proof-of-principle was only reported in 2016. Herein, we report the design and synthesis of new chiral ChB donors, as well as the catalytic activity evaluation of the 5,5-dibromo-2,2-dichloro-3-((perfluorophenyl)selanyl)-4,4-bipyridine as organocatalyst. The latter is based on the use of two electron-withdrawing groups, a pentafluorophenyl ring and a tetrahalo-4,4-bipyridine skeleton, as substituents at the selenium center. Atropisomery of the tetrahalo-4,4-bipyridine motif provides a chiral environment to these new ChB donors. Their synthesis was achieved through either selective lithium exchange and trapping or a site-selective copper-mediated reaction. Pure enantiomers of the 3-selanyl-4,4-bipyridine were obtained by high performance liquid chromatography enantioseparation on specific chiral stationary phase, and their absolute configuration was assigned by comparison of the measured and calculated electronic circular dichroism spectra. The capability of the selenium compound to participate in σ-hole-based interactions in solution was studied by 19 F NMR. Even if no asymmetric induction has been observed so far, the new selenium motif proved to be catalytically active in the reduction of 2-phenylquinoline by Hantzsch ester.

  • Methylerythritol Phosphate Pathway: Enzymatic Evidence for a Rotation in the LytB/IspH Catalyzed Reaction

    Philippe Chaignon, Benoit Eric Petit, Bruno Vincent, Lionel Allouche, Myriam Seemann
    Chemistry - A European Journal, 2019, ⟨10.1002/chem.201904676⟩ | Publiée le 22 novembre 2019
    Article dans une revue

    IspH/LytB, an oxygen-sensitive [4Fe-4S] enzyme, catalyzes the last step of the methylerythritol phosphate (MEP) pathway, a target for the development of new antimicrobial agents. This metalloenzyme converts (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate (HMBPP) into the two isoprenoid precursors: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Here, we report the synthesis of (S)-[4-2H1]HMBPP and (R)-[4-2H1]HMBPP, and a detailed NMR analysis of the products formed after their respective incubation with E. coli IspH/LytB in the presence of the biological reduction system used by E.coli to reduce the [4Fe-4S] center. (S)-[4-2H1]HMBPP was converted into [4-2H1]DMAPP and (E)-[4-2H1]IPP whereas (R)-[4-2H1]HMBPP yielded [4-2H1]DMAPP and (Z)-[4-2H1]IPP, hence providing the direct enzymatic evidence that the mechanism catalyzed by IspH/LytB involves a rotation of the CH2OH group of the substrate to display it away from the [4Fe-4S].

  • Modelling haemoproteins: Porphyrins and cyclodextrins as sources of inspiration

    Maxime Vonesch, Jennifer A Wytko, Hiroaki Kitagishi, Koji Kano, Jean Weiss
    Chemical Communications, 2019, 55 (97), pp.14558-14565. ⟨10.1039/C9CC07545C⟩ | Publiée le 11 novembre 2019
    Article dans une revue

    The association of hydrophobic cavities with porphyrin derivatives has been used to mimic haemoprotein structures. The most employed cavity in this field is b-cyclodextrin (b-CD) and scaffolds combining beta-CDs and porphyrins are expected to inspire the combination of porphyrins and cucurbiturils in a near future. Aside from providing water solubility to various porphyrinic structures, the beta-CD framework can also modulate and control the reactivity of the metal core of the porphyrin. After a general introduction of the challenges faced in the field of haemoprotein models and the binding behavior of beta-CDs, the article will discuss covalent and non-covalent association of porphyrins with beta-CDs. In each approach, the role of the CD differs according to the relative position of the concave CD host, either directly controlling the binding and transformation of a substrate on the metalloporphyrin or playing a dual role of controlling the water solubility and selecting the axial ligand of the metal core. The discussion will be of interest to the cucurbituril community as well as to the cavitand community as the information provided should be useful for the design of haemoprotein mimics using cucurbiturils (CBs).

  • Surfactant Micelles Enable Metal-Free Spirocyclization of Keto-Ynamides and Access to Aza-Spiro Scaffolds in Aqueous Media

    Frédéric Beltran, Andrea V Vela-Gonzalez, Tatiana Knaub, Marc Schmutz, Marie Pierre Krafft, Laurence Miesch
    European Journal of Organic Chemistry, 2019, 2019 (41), pp.6989-6993. ⟨10.1002/ejoc.201901441⟩ | Publiée le 10 novembre 2019
    Article dans une revue

    Micellar solutions of cetyltrimethylammonium bromide (CTAB) surfactant allow the spirocyclization of keto-ynamides in an aqueous medium without recourse to transition-metal catalysis, enabling access in water to naturally-occurring aza-spiro compounds with potential in drug discovery. The reaction was monitored by dynamic light scattering (DLS) and cryogenic transmission electron microscopy (cryo-TEM), which determined the morphology and change in size of the micelles before and after incorporation of the substrate and achievement of 5-endo-dig cyclization inside the micelles.

  • Synthesis of Indolizine and Pyrrolo[1,2- a ]azepine Derivatives via a Gold(I)-Catalyzed Three-Step Cascade

    Fatih Sirindil, Stéphane Golling, Raphaël Lamare, Jean-Marc Weibel, Patrick Pale, Aurélien Blanc
    Organic Letters, 2019, ⟨10.1021/acs.orglett.9b03402⟩ | Publiée le 25 octobre 2019
    Article dans une revue

    Linear N-alkenyl or alkynyl N-sulfonyl 1-aminobut-3-yn-2-ones are converted into bicyclic indolizines and pyrrolo[1,2-a]azepine-type alkaloids upon gold(I) catalysis (17 examples, 10-85%). The reaction cascade allowed to form C-N, O-S and CC bonds via a cycloisomerization/sulfonyl migration/cyclization process using 10 mol % of [(2-biphenyl)di-tert-butylphosphine]gold(I) triflimide complex in dichloromethane.

  • Organometal-catalyzed synthesis of high molecular weight poly-( l -lactic acid) with a covalently attached imidazolium salt: performance-enhanced reduced graphene oxide–PLLA biomaterials

    Yuri Clemente Andrade Sokolovicz, Clarissa Martins Leal Schrekker, Frédéric Hild, Leonardo de Oliveira Bodo, Júlia Lacerda Couto, Joice Sandra Klitzke, Thuany Maraschin, Nara Regina de Souza Basso, João Henrique Zimnoch dos Santos, Samuel Dagorne, Henri Stephan Schrekker
    New Journal of Chemistry, 2019, 43 (41), pp.16367-16373. ⟨10.1039/C9NJ03978C⟩ | Publiée le 21 octobre 2019
    Article dans une revue

  • Phenoxyamidine Zn and Al Complexes: Synthesis, Characterization, and Use in the Ring-Opening Polymerization of Lactide

    Florian Chotard, Rosita Lapenta, Anaëlle Bolley, Audrey Trommenschlager, Cédric Balan, Jérome Bayardon, Raluca Malacea-Kabbara, Quentin Bonnin, Ewen Bodio, Hélène Cattey, Philippe R. Richard, Stefano Milione, Alfonso Grassi, Samuel Dagorne, Pierre Le Gendre
    Organometallics, 2019, 38 (21), pp.4147-4157. ⟨10.1021/acs.organomet.9b00501⟩ | Publiée le 8 octobre 2019
    Article dans une revue

    Herein we report the synthesis of new ditopic ligands, which consist of a phenoxy group and N,N,N'trisubstituted amidines linked by a methylene spacer (L1-L4). Their coordination chemistry has been studied/investigated with Zn(II) and Al(III). Alkane elimination route between the phenol-amidine proligands (L1H-L4H) and Et2Zn led to dinuclear complexes [(L1-L4)ZnEt]2 (1a-4a) in which the Zn centers are chelated by phenoxyamidine ligands and bridged through the oxygen atom of the phenoxy groups. Salt metathesis reaction between two equivalents of the sodium amidine phenate L1Na and ZnCl2 led to a bis-chelate chiral spiro-complex (L12Zn) 1a'. Analogous alkane elimination route between AlMe3 and the phenol-amidine proligands L1H-L4H allowed the preparation of the mononuclear complexes [(L1-L4)AlMe2] (1b-4b). The phenoxyamidine-Al and Zn complexes have been characterized by NMR spectroscopy, elemental analysis and/or high resolution ESI-MS. The solid state structures of the proligands [L1H2][Br] and L2H as well as of six complexes have been established by single crystal X-ray diffraction analysis. Fluxional properties of the proligands L1H-L2H and of the complexes 1a and 2b have been investigated by VT NMR experiments. In the presence of an alcohol source, complexes 1a-4a and 1b-4b were used as initiators for the controlled ring-opening polymerization (ROP) of rac-lactide to afford atactic polylactic acid (PLA).

  • Structural and Optical Properties of Metal-Nitrosyl Complexes

    Chantal Daniel, Christophe Gourlaouen
    Molecules, 2019, 24 (20), pp.3638. ⟨10.3390/molecules24203638⟩ | Publiée le 1 octobre 2019
    Article dans une revue

    The electronic, structural and optical properties (including Spin-Orbit Coupling) of metal nitrosyl complexes [M(CN) 5 (NO)] 2-(M=Fe, Ru or Os) are investigated by means of Density Functional Theory, TD-DFT and MS-CASPT2 based on RASSCF wavefunction. The energy profiles connecting the N-bound (η 1-N), O-bound (η 1-O) and side-on (η 2-NO) conformations have been computed at DFT level for the closed shell singlet electronic state. For each structure the lowest singlet and triplet states have been optimized in order to get insight of the energy profiles describing the conformational isomerism in excited states. The energetics of the three complexes is similar with the N-bound structure being the most stable, with one exception, namely the triplet ground state of the O-bound isomer for the iron complex. The conformation isomerism is highly unfavorable in the S 0 electronic state with the occurrence of two energy barriers higher than 2 eV. The lowest bands of the spectra are assigned to MLCT NO /LLCT NO transitions with an increasing MLCT character going from iron to osmium. Two low-lying triplet states, T1 (MLCT NO /LLCT NO) and T2 (MLCT NO /IL NO), seem to control the lowest energy profile of the excited state conformational isomerism.

  • Structural description of surfaces and interfaces in biominerals by DNP SENS

    Thierry Azais, Stanislas von Euw, Widad Ajili, Stéphanie Auzoux-Bordenave, Philippe Bertani, David Gajan, Lyndon Emsley, Nadine Nassif, Anne Lesage
    Solid State Nuclear Magnetic Resonance, 2019, 102, pp.2-11. ⟨10.1016/j.ssnmr.2019.06.001⟩ | Publiée le 1 octobre 2019
    Article dans une revue

    Biological mineralized tissues are hybrid materials with complex hierarchical architecture composed of biominerals often embedded in an organic matrix. The atomic-scale comprehension of surfaces and organo-mineral interfaces of these biominerals is of paramount importance to understand the ultrastructure, the formation mechanisms as well as the biological functions of the related biomineralized tissue. In this communication we demonstrate the capability of DNP SENS to reveal the fine atomic structure of biominerals, and more specifically their surfaces and interfaces. For this purpose, we studied two key examples belonging to the most significant biominerals family in nature: apatite in bone and aragonite in nacreous shell. As a result, we demonstrate that DNP SENS is a powerful approach for the study of intact biomineralized tissues. Signal enhancement factors are found to be up to 40 and 100, for the organic and the inorganic fractions, respectively, as soon as impregnation time with the radical solution is long enough (between 12 and 24 h) to allow an efficient radical penetration into the calcified tissues. Moreover, ions located at the biomineral surface are readily detected and identified through 31P or 13C HETCOR DNP SENS experiments. Noticeably, we show that protonated anions are preponderant at the biomineral surfaces in the form of HPO42− for bone apatite and HCO32− for nacreous aragonite. Finally, we demonstrate that organo-mineral interactions can be probed at the atomic level with high sensitivity. In particular, reliable 13C-{31P} REDOR experiments are achieved in a few hours, leading to the determination of distances, molar proportion and binding mode of citrate bonded to bone mineral in native compact bone. According to our results, only 80% of the total amount of citrate in bone is directly interacting with bone apatite through two out of three carboxylic groups.

  • Coating of polydopamine on polyurethane open cell foams to design soft structured supports for molecular catalysts

    Ahmed Ait Khouya, Miguel Mendez Martinez, Philippe Bertani, Thierry Romero, Damien Favier, Thierry Roland, Valentin Guidal, Virginie Bellière-Baca, David Edouard, Loïc Jierry, Vincent Ritleng
    Chemical Communications, 2019, 55 (79), pp.11960-11963. ⟨10.1039/C9CC05379D⟩ | Publiée le 1 octobre 2019
    Article dans une revue

    Polydopamine-coated polyurethane open cell foams are used as structured support for molecular catalysts through the covalent anchoring of alkoxysilyl arms by the catechol groups of the mussel-inspired layer. This strong bonding prevents their leaching. No alteration of the mechanical properties of the flexible support is observed after repeated uses of the catalytic materials.

  • Evaluation of the Catalytic Capability of cis - and trans -Diquinoxaline Spanned Cavitands

    Mami Inoue, Shinsuke Kamiguchi, Katto Ugawa, Shaima Hkiri, Jules Bouffard, David Sémeril, Tetsuo Iwasawa
    European Journal of Organic Chemistry, 2019, 2019 (36), pp.6261-6268. ⟨10.1002/ejoc.200((will⟩ | Publiée le 30 septembre 2019
    Article dans une revue

    Evaluation of Catalytic Capability of cis-and trans-Diquinoxaline Spanned Cavitands Mami Inoue, [a] Shinsuke Kamiguchi, [a] Katto Ugawa, [a] Shaima Hkiri, [b,c] Jules Bouffard, [b] David Sémeril* [b] and Tetsuo Iwasawa* [a] Keywords: Introverted ligand / Cis-spanned cavitands / Diquinoxaline-extended resorcin[4]arene / Gold and Rhodium catalysis Three new cis-diquinoxaline spanned cavitands were synthetized. These cis-diphosphinated derivatives were assigned in homogeneous gold-catalyzed dimerization and hydration of alkynes, and rhodium-catalyzed styrene hydroformylation. Results were ranked with those obtained with their trans-diphosphinated analogues. The structure-activity relationship realized with these cis-or trans-flanked cavitands shows that the cis-or transpositioning of the catalytic center has a direct effect on the effectiveness of the cooperation between the two metallic centers. In fact, the distance between the two metal has a direct effect either on activity or on regioselectivity of a catalytic reaction.

  • Tuning graphene transistors through ad hoc electrostatics induced by a nanometer-thick molecular underlayer

    Ather Mahmood, Cheol-Soo Yang, Seunghun Jang, Lucie Routaboul, Hyunju Chang, Alessio Ghisolfi, Pierre Braunstein, Laetitia Bernard, Tindara Verduci, Jean-François Dayen, Paolo Samori, Jeong-O Lee, Bernard Doudin
    Nanoscale, 2019, ⟨10.1039/C9NR06407A⟩ | Publiée le 5 septembre 2019
    Article dans une revue

    We report on the modulation of the electrical properties of graphene-based transistors that mirrors the properties of a few nanometers thick layer made of dipolar molecules sandwiched in-between the 2D material and the SiO2 dielectric substrate. The chemical composition of the films of quinonomonoimines zwitterions molecules adsorbed onto SiO2 has been explored by means of X-ray photoemission and mass spectroscopies. Graphene-based devices are then fabricated by transferring the 2D material onto the molecular film, followed by the top source-drain electrodes deposition. The degree of supramolecular order in disordered films of dipolar molecules was found to be partially improved as a result of the electric field at low temperatures, as revealed by the emergence of hysteresis in the transfer curves of the transistors. The use of molecules from the same family and suitably designed to interact with the dielectric surface yields a disapperance of the hysteresis. DFT calculations confirm that the dressing of the molecules by an external electric field exhibits multiple energy minima landscape that explains the thermally-stabilized capacitive coupling observed. This study demonstrates that the design and exploitation of ad-hoc molecules as interlayer between a dielectic substrate and graphene represents a powerful tool for tuning the electrical properties of the 2D material. Conversely, graphene can be used as an indicator of the stability of molecular layers, by providing insight into the energetics of ordering of dipolar molecules under the effect of electrical gating.

  • (Bio)chemical Strategies To Modulate Amyloid-β Self-Assembly

    Sara Ayala, Pierre Genevaux, Christelle Hureau, Peter Faller
    ACS Chemical Neuroscience, 2019, 10 (8), pp.3366-3374. ⟨10.1021/acschemneuro.9b00239⟩ | Publiée le 21 août 2019
    Article dans une revue

    Amyloid plaques are one of the two hallmarks of Alzheimer’s disease (AD). They consist mainly of fibrils made of self-assembled amyloid-β (Aβ) peptides. Aβ is produced in healthy brains from proteolytic cleavage of the amyloid precursor protein. Aβ aggregates, in particular smaller, soluble aggregates, are toxic to cells. Hence, modulating the self-assembly of Aβ became a very active field of research, with the aim to reduce the amount of the toxic aggregates of Aβ or to block their toxic action. A great variety of molecules, chemical and biological, are able to modify the aggregation of Aβ. Here we give an overview of the different mechanistic ways to modulate Aβ aggregation and on which step in the self-assembly molecules can interfere. We discuss the aggregation modulators according to different important parameters, including the type of interaction (weak interaction, coordination or covalent bonds), the importance of kinetics and thermodynamics, the size of the modulating molecules, and binding specificity.

  • CO 2 Adsorption Capacities in Zeolites and Layered Double Hydroxide Materials

    Cristina Megias-Sayago, Rogéria Bingre, Liang Huang, Gaëtan Lutzweiler, Qiang Wang, Benoit Louis
    Frontiers in Chemistry, 2019, 1, ⟨10.3389/fchem.2019.00551⟩ | Publiée le 6 août 2019
    Article dans une revue

    The development of technologies that allow us to reduce CO 2 emissions is mandatory in today's society. In this regard, we present herein a comparative study of CO 2 adsorption over three types of materials: zeolites, layered double hydroxides (LDH), and zeolites coated LDH composites. The influence of the zeolite Si/Al ratio on zeolites sorption capacity along with the presence of mesopores was investigated. By comparing these results with the well-known performance of LDHs, we aim to provide insights on the factors that may influence the CO 2 capture capacity over zeolites, thus providing useful tools for tuning their properties upon post-treatments.

  • Photophysical properties of porphyrinic covalent cages endowed with different flexible linkers

    Daniel Sánchez-Resa, Laëtitia Schoepff, Ryan Djemili, Stephanie Durot, Valérie Heitz, Barbara Ventura
    Journal of Porphyrins and Phthalocyanines, 2019, 23 (07n08), pp.841-849. ⟨10.1142/S1088424619500925⟩ | Publiée le 30 juillet 2019
    Article dans une revue

    In-depth photophysical studies of four flexible covalent cages bearing either two freebase porphyrins or one free-base porphyrin and one Zn(II) porphyrin, connected by linkers of different lengths, are reported. In the case of the cages with two free-base porphyrins, exciton coupling between the porphyrins is evidenced by large and split Soret bands in the absorption spectra, but the different length of the linkers has only a slight effect on their emission properties. Strong electronic interactions between the porphyrins are also evidenced for the cages that incorporate a free-base porphyrin and a Zn(II) porphyrin, with a more pronounced splitting of the Soret band for the system with longer linkers. In these cages, following excitation of the Zn-porphyrin component, an almost quantitative energy transfer to the free-base unit occurs, with a rate 1.4 times faster in the cage with longer linkers (1.4 × 1011 s-1 vs. 1.0 × 1011 s-1). This difference might reflect the more flattened conformation adopted by the cage equipped with longer and more flexible linkers, the latter allowing for a shorter interplanar distance between the porphyrins. The results are discussed in terms of classical and short-range energy transfer mechanisms.

  • Strong Influence of Decoherence Corrections and Momentum Rescaling in Surface Hopping Dynamics of Transition Metal Complexes

    Felix Plasser, Sebastian Mai, Maria Fumanal, Etienne Gindensperger, Chantal Daniel, Leticia González
    Journal of Chemical Theory and Computation, 2019, 15 (9), pp.5031-5045. ⟨10.1021/acs.jctc.9b00525⟩ | Publiée le 24 juillet 2019
    Article dans une revue

    The reliability of different parameters in the surface hopping method is assessed for a vibronic coupling model of a challenging transition metal complex, where a large number of electronic states of different multiplicities are met within a small energy range. In particular, the effect of two decoherence correction schemes and of various strategies for momentum rescaling and treating frustrating hops during the dynamics is investigated and compared against an accurate quantum dynamics simulation. The results show that surface hopping is generally able to reproduce the reference but also that small differences in the protocol used can strongly affect the results. We find a clear preference for momentum rescaling along only one degree of freedom, using either the nonadiabatic coupling or the gradient difference vector, and trace this effect back to an enhanced number of frustrated hops. Furthermore, reflection of the momentum after frustrated hops is shown to work better than to ignore the process completely. The study also highlights the importance of the decoherence correction, but neither of the two methods employed, energy based decoherence or augmented fewest switches surface hopping, performs completely satisfactory and we trace this effect back to a lack of size-consistency. Finally, the effect of different methods for analyzing the populations is highlighted. More generally, the study emphasizes the importance of the often neglected parameters in surface hopping and shows that there is still a need for simple, robust, and generally applicable correction schemes.

  • Total Synthesis of Rhazinilam through Gold-Catalyzed Cycloisomerization–Sulfonyl Migration and Palladium-Catalyzed Suzuki–Miyaura Coupling of Pyrrolyl Sulfonates

    Fatih Sirindil, Jean-Marc Weibel, Patrick Pale, Aurelien Blanc
    Organic Letters, 2019, 21 (14), pp.5542-5546. ⟨10.1021/acs.orglett.9b01860⟩ | Publiée le 19 juillet 2019
    Article dans une revue

    We report the first general conditions for the challenging Suzuki-Miyaura reaction with pyrrole-related sulfonate coupling partners (24 examples, 60-97%). Bis(dichloro)bis(2-dicyclohexylphosphino-2′,4′,6′-triiso-propylbiphenyl) palladium(II) precatalyst ensures the high efficiency of the reaction. The total synthesis of rhazinilam, a monoterpenoid indole alkaloid, highlights such cross-coupling as well as the simple preparation of pyrrolyl sulfonates by N-toO 1,5-sulfonyl migration catalyzed by gold(I) (15 examples, 54-93%).

  • Benzosultam Synthesis by Gold(I)-Catalyzed Ammonium Formation/Nucleophilic Substitution

    Romain Pertschi, Jean-Marc Weibel, Patrick Pale, Aurelien Blanc
    Organic Letters, 2019, 21 (14), pp.5616-5620. ⟨10.1021/acs.orglett.9b01962⟩ | Publiée le 19 juillet 2019
    Article dans une revue

    The synthesis of benzosultams has been achieved through a gold(I)-catalyzed ammonium formation strategy. Starting from easily available N-(2-alkynyl)phenylsulfonyl azetidine derivatives, a cyclization reaction generated a spiroammonium gold intermediate which was ring-opened by nucleophilic alcohol or indole. This new methodology is compatible with large variation on the substrates and nucleophiles, and allowed to form benzosultams in high yield (18-98%, 20 examples). This strategy also allowed the preparation of benzosultam analogs via iododeauration and subsequent cross-coupling reactions.

  • Coordination-Driven Construction of Porphyrin Nanoribbons at a Highly Oriented Pyrolytic Graphite (HOPG)/Liquid Interface

    Mary-Ambre Carvalho, Hervé Dekkiche, Mayumi Nagasaki, Yoshihiro Kikkawa, Romain Ruppert
    Journal of the American Chemical Society, 2019, 141 (26), pp.10137-10141. ⟨10.1021/jacs.9b02145⟩ | Publiée le 3 juillet 2019
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    Nanostructures were built at the solid/liquid interface by self-assembly and/or coordination bonds. Metalloporphyrins bearing two external coordination sites and long alkyl chains allowed the self-assembly of the compounds on highly oriented pyrolitic graphite. After addition of a metal ion, long transition-metal linked porphyrin nanoribbons were obtained and visualized by scanning tunneling microscopy. In these porphyrin ribbons electronic delocalization is possible through the d orbitals of the connecting metal ions.

  • Projected site-occupation embedding theory

    Bruno Senjean
    Physical Review B, 2019, 100 (3), ⟨10.1103/PhysRevB.100.035136⟩ | Publiée le 1 juillet 2019
    Article dans une revue

    Site-occupation embedding theory (SOET) [B. Senjean et al., Phys. Rev. B 97, 235105 (2018)] is an in-principle exact embedding method combining wavefunction theory and density functional theory that gave promising results when applied to the one-dimensional Hubbard model. Despite its overall good performance, SOET faces a computational cost problem as its auxiliary impurity-interacting system remains the size of the full system (which is problematic as the computational cost increases exponentially with system size). In this work, this issue is circumvented by employing the Schmidt decomposition, thus leading to a drastic reduction of the computational cost while retaining the same accuracy. We show that this projected version of SOET (P-SOET) is competitive with other embedding techniques such as density matrix embedding theory (DMET) [G. Knizia and G. K-L. Chan, Phys. Rev. Lett. 109, 186404 (2012)]. In contrast to the latter, density functional contributions come naturally into play in P-SOET's framework without any additional computational cost or double counting effect. As an important result, the density-driven Mott-Hubbard transition (which is displayed by multiple impurity sites in DMET or in dynamical mean-field theory) is well described, for the first time, with a single impurity site.

  • Functionalized TiO 2 Nanorods on a Microcantilever for the Detection of Organophosphorus Chemical Agents in Air

    Urelle Biapo, Alessio Ghisolfi, Geoffrey Gerer, Denis Spitzer, Valérie Keller, Thomas Cottineau
    ACS Applied Materials & Interfaces, 2019, 11 (38), pp.35122-35131. ⟨10.1021/acsami.9b11504⟩ | Publiée le 20 juin 2019
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    We report the fabrication of nanostructured microcantilevers employed as sensors for the detection of organophosphorus (OPs) vapors. These micromechanical sensors are prepared using a two-step procedure first optimized on a silicon wafer. TiO 2 one-dimensional nanostructures are synthesized at a silicon surface by a solvothermal method and then grafted with bifunctional molecules having an oxime group known for its strong affinity with organophosphorus compounds. The loading of oxime molecules grafted on the different nanostructured surfaces was quantified by UV spectroscopy. It has been found that a wafer covered by vertically aligned rutile TiO 2 nanorods (NRs), with an average length and width of 9.5 μm and 14.7 nm, respectively, provides an oxime function density of 360 nmol cm −2. The optimized TiO 2 nanorod synthesis was successfully reproduced on the cantilevers, leading to a homogeneous and reproducible TiO 2 NR film with the desired morphology. Thereafter, oxime molecules have been successfully grafted on the nanostructured cantilevers. Detection tests were performed in a dynamic mode by exposing the microcantilevers to dimethyl methylphosphonate (a model compound of toxic OPs agents) and following the shift of the resonant frequency. The nanostructure and the presence of the molecules on a TiO 2 NR surface both improve the response of the sensors. A detection limit of 2.25 ppm can be reached with this type of sensor.

  • When Gold Cations Meet Polyoxometalates

    Aurélien Blanc, Pierre de Frémont
    Chemistry - A European Journal, 2019, 25 (41), pp.9553-9567. ⟨10.1002/chem.201806369⟩ | Publiée le 5 juin 2019
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    Merging gold(I) cations with polyoxometalate anions results in various interclusters and complexes. Herein, the syntheses of these newly emerging gold(I)/polyoxometalate materials are reviewed. The applications of these promising hybrids in organic catalysis are also summarized and evaluated in terms of the advantages and limitations of the catalysts including efficiency, synergistic effects and recyclability.

  • Direct comparison of the in vitro and in vivo stability of DFO, DFO* and DFOcyclo* for 89 Zr-immunoPET

    René Raavé, Gerwin Sandker, Pierre Adumeau, Christian Borch Jacobsen, Floriane Mangin, Michel Meyer, Mathieu Moreau, Claire Bernhard, Laurène da Costa, Adrien Dubois, Victor Goncalves, Magnus Gustafsson, Mark Rijpkema, Otto Boerman, Jean-Claude Chambron, Sandra Heskamp, Franck Denat
    European Journal of Nuclear Medicine and Molecular Imaging, 2019, 46 (9), pp.1966 - 1977. ⟨10.1007/s00259-019-04343-2⟩ | Publiée le 3 juin 2019
    Article dans une revue

    Purpose Currently, the most commonly used chelator for labelling antibodies with 89 Zr for immunoPET is desferrioxamine B (DFO). However, preclinical studies have shown that the limited in vivo stability of the 89 Zr-DFO complex results in release of 89 Zr, which accumulates in mineral bone. Here we report a novel chelator DFOcyclo*, a preorganized extended DFO derivative that enables octacoordination of the 89 Zr radiometal. The aim was to compare the in vitro and in vivo stability of [ 89 Zr]Zr-DFOcyclo*, [ 89 Zr]Zr-DFO* and [ 89 Zr]Zr-DFO. Methods The stability of 89 Zr-labelled chelators alone and after conjugation to trastuzumab was evaluated in human plasma and PBS, and in the presence of excess EDTA or DFO. The immunoreactive fraction, IC 50 , and internalization rate of the conjugates were evaluated using HER2-expressing SKOV-3 cells. The in vivo distribution was investigated in mice with subcutaneous HER2 + SKOV-3 or HER2 − MDA-MB-231 xenografts by PET/CT imaging and quantitative ex vivo tissue analyses 7 days after injection. Results 89 Zr-labelled DFO, DFO* and DFOcyclo* were stable in human plasma for up to 7 days. In competition with EDTA, DFO* and DFOcyclo* showed higher stability than DFO. In competition with excess DFO, DFOcyclo*-trastuzumab was significantly more stable than the corresponding DFO and DFO* conjugates (p &lt; 0.001). Cell binding and internalization were similar for the three conjugates. In in vivo studies, HER2 + SKOV-3 tumour-bearing mice showed significantly lower bone uptake (p &lt; 0.001) 168 h after injection with [ 89 Zr]Zr-DFOcyclo*-trastuzumab (femur 1.5 ± 0.3%ID/g, knee 2.1 ± 0.4%ID/g) or [ 89 Zr]Zr-DFO*-trastuzumab (femur 2.0 ± 0.3%ID/g, knee 2.68 ± 0.4%ID/g) than after injection with [ 89 Zr]Zr-DFO-trastuzumab (femur 4.5 ± 0.6%ID/g, knee 7.8 ± 0.6%ID/g). Blood levels, tumour uptake and uptake in other organs were not significantly different at 168 h after injection. HER2 − MDA-MB-231 tumour-bearing mice showed significantly lower tumour uptake (p &lt; 0.001) after injection with [ 89 Zr]Zr-DFOcyclo*-trastuzumab (16.2 ± 10.1%ID/g) and [ 89 Zr]Zr-DFO-trastuzumab (19.6 ± 3.2%ID/g) than HER2 + SKOV-3 tumour-bearing mice (72.

  • The potential of triterpenoids as chemotaxonomic tools to identify and differentiate genuine, adulterated and archaeological balsams

    Blandine Courel, Pierre Adam, Philippe Schaeffer
    Microchemical Journal, 2019, 147, pp.411-421. ⟨10.1016/j.microc.2019.03.035⟩ | Publiée le 1 juin 2019
    Article dans une revue

    Plant exudates have been extensively used in the past for different applications related to their olfactory, physical or medical properties. Their identification in archaeological samples relies, notably, on the characterisation of chemotaxonomic molecular markers but is often hampered by the severe alteration of their typical genuine molecular signature due to ageing. Among these exudates, those recovered from Styrax, Liquidambar and Myroxylon tree species – defined as balsams – have been exploited in the past for their pleasant scent and medical properties. They are characterised by a large variety of aromatic compounds, especially of the cinnamate and benzoate series, which can be used to assess their botanical source. These compound series may, however, be subject to alteration over time during exposure to environmental conditions in the case of archaeological material. As a result, their reliability as chemotaxonomic markers to characterise and discriminate archaeological balsams is problematic and questionable. We have, therefore, carried out a comparative analysis of various extant balsams (Styrax officinalis, S. paralleloneurum, S. tonkinensis, Liquidambar styraciflua, L. orientalis and Myroxylon balsamum var. pereirae) using gas chromatography–mass spectrometry to search for more solid lipid markers. The results revealed that a distinction between styrax, liquidambars, Peru and Tolu balsams is possible based on the distribution of pentacyclic triterpenes. The predominance of uncommon 6‑oxygenated derivatives of oleanolic acid among triterpenoids could be specifically related to styrax resins. Liquidambar gums were characterised by the predominance of oleanonic acid together with uncommon 3-epi oleanolic and ursolic acids, whereas Peru balsam was rich in cinnamic and benzoic acids, but devoid of triterpenoids. Thanks to the high specificity of some of these triterpenes, already known for their low volatility and robustness towards alteration processes, they should be considered as reliable molecular tools for the unambiguous identification of archaeological balsams. In addition to archaeological applications, these triterpenic markers might also find an application for the detection of counterfeit balsams.

  • Adaptive behaviour of a ditopic phosphine ligand

    Nicolas Renard, Eric Brenner, Dominique Matt, Christophe Gourlaouen
    European Journal of Inorganic Chemistry, 2019, ⟨10.1002/ejic.201900571⟩ | Publiée le 28 mai 2019
    Article dans une revue

    Synthetic, structural and computational studies have been performed to investigate ligand interchange in the fluxional chelate complex [RhCl3(Ph2PACH2C(OA)OEt‐κ2POA)(Ph2PBCH2C(OB)OEt‐κP)], which contains two hybrid phosphine‐ester ligands, one acting as P,O chelator, the other as a P‐monodentate ligand. The observed ligand exchange may occur according to two pathways which both involve four elementary movements: a) oxygen dissociation with formation of a lacunary octahedral RhCl3P2 intermediate; b) migration of the Cl atom trans to PA towards the position trans to PB; c) rotations of the phosphine moieties about the Rh‐P bonds, these occurring either concomitantly with the Cl displacement or in a separate step; d) coordination of an oxygen atom of the second phosphine. The two pathways thus differ by conformational changes within two distinct steps. In each pathway the rate limiting step is the one involving a movement of the two phosphines, which generates steric frictions between the two PPh2 groups. The calculated theoretical energetic spans of both pathways (ΔG≠ ~ 17 kcal.mol‐1) is close to the energy barrier obtained from a variable temperature NMR study carried out in C2D2Cl4 (ΔG≠ = 15.5 kcal mol‐1). While one of the pathways leads to an isomer with a Rh‐bound ethoxy O atom, the other results in the isomer having the metal coordinated to the adjacent C=O group. Exchange between the two O atoms of the coordinated ester group occurs readily (ΔGTS = 12.5 kcal mol‐1) .

  • Interpretation of Experimental Soret Bands of Porphyrins in Flexible Covalent Cages and in Their Related Ag(I) Fixed Complexes

    Laura Zanetti-Polzi, Andrea Amadei, Ryan Djemili, Stephanie Durot, Laëtitia Schoepff, Valérie Heitz, Barbara Ventura, Isabella Daidone
    Journal of Physical Chemistry C, 2019, 123 (20), pp.13094-13103. ⟨10.1021/acs.jpcc.9b00742⟩ | Publiée le 23 mai 2019
    Article dans une revue

    The essential features of the experimental Soret bands of two covalent cages, consisting of two zinc-porphyrins connected by four flexible spacers, are for the first time interpreted and characterized at a molecular level by means of a mixed quantum/classical procedure based on molecular dynamics (MD) simulation and the perturbed matrix method (PMM). The same method allows also for a comprehensive interpretation of the changes in the UV−visible absorbance of the cages upon silver(I) complexation to the peripheral binding sites. Although the zinc-to-zinc distance is found to be similar in both cages, the MD-PMM calculations show that the conformation adopted by the cage with longer linkers corresponds to more slipped porphyrins, giving rise to a red-shifted (7−8 nm), broader, and slightly split Soret peak with respect to the cage with shorter linkers. The process of silver(I) complexation separates the two porphyrins in a face-to-face conformation in both cages, resulting in narrower (and more similar) Soret bands due to a reduced excitonic coupling. Despite the similar features of the spectra of the two silver(I)-complexed cages, a slight difference in the peak maxima of about 2 nm is observed, arising from a slightly shorter zinc-to-zinc distance in the cage with longer linkers. These results show that the MD-PMM methodology is a reliable method to obtain information on the relative disposition and exciton coupling interaction of porphyrins in flexible systems in solution, from the analysis of their absorption spectra.

  • Liquides ioniques magnétiques : une voie moléculaire vers des aimants liquides

    Athanassios K Boudalis, Philippe Turek
    Les Techniques de l'Ingenieur, 2019, ⟨10.51257/a-v1-in229⟩ | Publiée le 10 mai 2019
    Article dans une revue

    Les propriétés magnétiques des matériaux sont exploitées dans de nombreuses applications : des plus classiques, composants électromécaniques, enregistrement magnétique, aux plus élaborées et futuristes, comme la réfrigération magnétique ou l'électronique de spin. Cet article introduit a notion de Liquide Ionique (LI) avec son extension aux composés incorporant des ions magnétiques (LIM). Une revue des LIM synthétisés à ce jour est présentée, avec leurs principales propriétés physicochimiques, suivie d'une présentation des applications existantes, avec quelques perspectives pour leur étude et utilisation futures.

  • Intriguing Effects of Halogen Substitution on the Photophysical Properties of 2,9-(Bis)halo-Substituted Phenanthrolinecopper(I) Complexes

    Samantha Brown-Xu, Maria Fumanal, Christophe Gourlaouen, Lea Gimeno, Alessia Quatela, Christine Thobie-Gautier, Errol Blart, Aurélien Planchat, François Riobé, Cyrille Monnereau, Lin Chen, Chantal Daniel, Yann Pellegrin
    Inorganic Chemistry, 2019, 58 (12), pp.7730-7745. ⟨10.1021/acs.inorgchem.9b00042⟩ | Publiée le 2 mai 2019
    Article dans une revue

    Three new copper(I) complexes [Cu(LX)2] + (PF6-) (where LX stands for 2,9-di-halo-1,10-phenanthroline and X = Cl, Br and I) have been synthesized in order to study the impact of halogen substituents tethered in α position of the chelating nitrogen atoms on their physical properties. Photophysical properties of these new complexes (hereafter named Cu-X) were characterized both in their ground and excited states. Femtosecond ultrafast spectroscopy revealed that early photo-induced processes are faster for Cu-I than for Cu-Cl or Cu-Br, both showing similar behaviors. Their electronic absorption and electrochemical properties are comparable to benchmark [Cu(dmp)2] + (where dmp stands for 2,9-dimethyl-1,10-phenanthroline); furthermore, their optical features were fully reproduced by TD-DFT and Ab Initio Molecular Dynamics (AIMD) calculations. All three complexes are luminescent at room temperature, showing that halogen atoms bound to positions 2 and 9 of phenanthroline are sufficiently bulky to prevent strong interactions between the excited Cu complexes and solvent molecules in the coordination sphere. Their behavior in the excited state, more specifically the extent of photoluminescence efficiency and its dependence on temperature, is however strongly dependent on the nature of the halogen. A combination of ultrafast transient absorption spectroscopy, temperature dependent steady state fluorescence spectroscopy and 2 computational chemistry allows to gain a deeper understanding of the behavior of all three complexes in their excited state.

  • Allostery in Its Many Disguises: From Theory to Applications

    Shoshana J. Wodak, Emanuele Paci, Nikolay Dokholyan, Igor Berezovsky, Amnon Horovitz, Jing Li, Vincent Hilser, Ivet Bahar, John Karanicolas, Gerhard Stock, Peter Hamm, Roland H. Stote, Jerome Eberhardt, Yassmine Chebaro, Annick Dejaegere, Marco Cecchini, Jean-Pierre Changeux, Peter Bolhuis, Jocelyne Vreede, Pietro Faccioli, Simone Orioli, Riccardo Ravasio, Le Yan, Carolina Brito, Matthieu Wyart, Paraskevi Gkeka, Ivan Rivalta, Giulia Palermo, J. Andrew Mccammon, Joanna Panecka-Hofman, Rebecca C. Wade, Antonella Di Pizio, Masha Niv, Ruth Nussinov, Chung-Jung Tsai, Hyunbum Jang, Dzmitry Padhorny, Dima Kozakov, Tom Mcleish
    Structure, 2019, 27 (4), pp.566-578. ⟨10.1016/j.str.2019.01.003⟩ | Publiée le 2 avril 2019
    Article dans une revue

    Allosteric regulation plays an important role in many biological processes, such as signal transduction, transcriptional regulation, and metabolism. Allostery is rooted in the fundamental physical properties of macromolecular systems, but its underlying mechanisms are still poorly understood. A collection of contributions to a recent interdisciplinary CECAM (Center Européen de Calcul Atomique et Moléculaire) workshop is used here to provide an overview of the progress and remaining limitations in the understanding of the mechanistic foundations of allostery gained from computational and experimental analyses of real protein systems and model systems. The main conceptual frameworks instrumental in driving the field are discussed. We illustrate the role of these frameworks in illuminating molecular mechanisms and explaining cellular processes, and describe some of their promising practical applications in engineering molecular sensors and informing drug design efforts.

  • Tertiary Enamide-Triggered S E Ar

    Frederic Beltran, Laurence Miesch
    Organic Letters, 2019, 21 (6), pp.1569-1573. ⟨10.1021/acs.orglett.8b03987⟩ | Publiée le 15 mars 2019
    Article dans une revue

    Two unprecedented domino reactions are described, starting from ketospiro-enesulfonamides. By treatment with ZrCl4 and allylsilane, an intramolecular electrophilic aromatic substitution and subsequent allylation is observed. By treatment with TiCl4 and allylsilane, a double enamine-type reaction takes place, thus creating simultaneously four contiguous stereogenic centers diastereoselectively.

  • Combined small molecule and loss-of-function screen uncovers estrogen receptor alpha and CAD as host factors for HDV infection and antiviral targets

    Eloi R Verrier, Amélie Weiss, Charlotte Bach, Laura Heydmann, Vincent Turon-Lagot, Arnaud Kopp, Houssein El Saghire, Emilie Crouchet, Patrick Pessaux, Thomas Garcia, Patrick Pale, Mirjam B. Zeisel, Camille Sureau, Catherine Schuster, Laurent Brino, Thomas F. Baumert
    Gut, 2019, pp.gutjnl-2018-317065. ⟨10.1136/gutjnl-2018-317065⟩ | Publiée le 1 mars 2019
    Article dans une revue

    OBJECTIVE: Hepatitis D virus (HDV) is a circular RNA virus coinfecting hepatocytes with hepatitis B virus. Chronic hepatitis D results in severe liver disease and an increased risk of liver cancer. Efficient therapeutic approaches against HDV are absent. DESIGN: Here, we combined an RNAi loss-of-function and small molecule screen to uncover host-dependency factors for HDV infection. RESULTS: Functional screening unravelled the hypoxia-inducible factor (HIF)-signalling and insulin-resistance pathways, RNA polymerase II, glycosaminoglycan biosynthesis and the pyrimidine metabolism as virus-hepatocyte dependency networks. Validation studies in primary human hepatocytes identified the carbamoyl-phosphatesynthetase 2, aspartate transcarbamylase and dihydroorotase (CAD) enzyme and estrogen receptor alpha (encoded by ESR1) as key host factors for HDV life cycle. Mechanistic studies revealed that the two host factors are required for viral replication. Inhibition studies using N-(phosphonoacetyl)-L-aspartic acid and fulvestrant, specific CAD and ESR1 inhibitors, respectively, uncovered their impact as antiviral targets. CONCLUSION: The discovery of HDV host-dependency factors elucidates the pathogenesis of viral disease biology and opens therapeutic strategies for HDV cure.

  • Aurone derivatives as promising antibacterial agents against resistant Gram-positive pathogens

    Hamza Olleik, Samir Yahiaoui, Brayan Roulier, Elise Courvoisier-Dezord, Josette Perrier, Basile Pérès, Akram Hijazi, Elias Baydoun, Josette Raymond, Ahcène Boumendjel, Marc Maresca, Romain Haudecoeur
    European Journal of Medicinal Chemistry, 2019, 165, pp.133-141. ⟨10.1016/j.ejmech.2019.01.022⟩ | Publiée le 1 mars 2019
    Article dans une revue

    A set of variously substituted aurones was synthesized and evaluated against Methicillin-Resistant S. aureus (MRSA) and P. aeruginosa. Several analogues were found active against MRSA, but no effect was recorded against P. aeruginosa. Compounds 27, 30 and 33 showed low cytotoxicity, and were tested against a full range of bacterial (Gram-positive and Gram-negative) and fungal species, including resistant strains. These aurones displayed a selective inhibition of Gram-positive bacteria with excellent Therapeutic Index values, while showing no significant action on several Gram-negative strains, H. pylori and V. alginolyticus being the only susceptible strains among the Gram-negative bacteria tested. A per-meabilization assay showed that the antibacterial activity of at least some of the aurones could be linked to alterations of the bacterial membrane. Overall, this study endorses the use of the aurone scaffold for the development of new potent and selective antibacterial agents.

  • Pros and cons of virtual screening based on public “Big Data”: In silico mining for new bromodomain inhibitors

    Iuri Casciuc, Dragos Horvath, Anastasiia Gryniukova, Kateryna Tolmachova, Oleksandr Vasylchenko, Petro Borysko, Yurii Moroz, Jürgen Bajorath, Alexandre Varnek
    European Journal of Medicinal Chemistry, 2019, 165, pp.258-272. ⟨10.1016/j.ejmech.2019.01.010⟩ | Publiée le 1 mars 2019
    Article dans une revue

    The Virtual Screening (VS) study described herein aimed at detecting novel Bromodomain BRD4 binders and relied on knowledge from public databases (ChEMBL, REAXYS) to establish a battery of predictive models of BRD activity for in silico selection of putative ligands. Beyond the actual discovery of new BRD ligands, this represented an opportunity to practically estimate the actual usefulness of public domain "Big Data" for robust predictive model building. Obtained models were used to virtually screen a collection of 2 million compounds from the Enamine company collection. This industrial partner then experimentally screened a subset of 2992 molecules selected by the VS procedure for their high likelihood to be active. Twenty nine confirmed hits were detected after experimental testing, representing 1% of the selected candidates. As a general conclusion, this study emphasizes once more that public structure-activity databases are nowadays key assets in drug discovery. Their usefulness is however limited by the state-of-the-art knowledge harvested so far by published studies. Target-specific structure activity information is rarely rich enough, and its heterogeneity makes it extremely difficult to exploit in rational drug design. Furthermore, published affinity measures serving to build models selecting compounds to be experimentally screened may not be well correlated with the experimental hit selection criterion (in practice, often imposed by equipment constraints). Nevertheless, a robust 2.6-fold increase in hit rate with respect to an equivalent, random screening campaign showed that machine learning is able to extract some real knowledge in spite of all the noise in structure-activity data.

  • Light triggers molecular shuttling in rotaxanes: control over proximity and charge recombination

    Maximilian Wolf, Ayumu Ogawa, Mareike Bechtold, Maxime Vonesch, Jennifer Wytko, Koji Oohora, Stéphane Campidelli, Takashi Hayashi, Dirk Guldi, Jean Weiss
    Chemical Science, 2019, 10 (13), pp.3846-3853. ⟨10.1039/C8SC05328F⟩ | Publiée le 27 février 2019
    Article dans une revue

    We present the synthesis of novel rotaxanes based on mechanically interlocked porphyrins and fullerene and their advanced investigations by means of photophysical measurements. To this end, a fullerene-capped dumbbell-type axle containing a central triazole was threaded through strapped (metallo)porphyrins—either a free-base or a zinc porphyrin. Femtosecond-resolved transient absorption measurements revealed charge-separation between the porphyrin and fullerene upon light excitation. Solvent polarity and solvent coordination effects induced molecular motion of the rotaxanes upon charge separation and enabled, for the first time, subtle control over the charge recombination by enabling and controlling the directionality of shuttling.

  • Charge‐Transfer versus Charge‐Separated Triplet Excited States of [Re I (dmp)(CO) 3 (His124)(Trp122)] + in Water and in Modified Pseudomonas aeruginosa Azurin Protein

    Marco Marazzi, Hugo Gattuso, Maria Fumanal, Chantal Daniel, Antonio Monari
    Chemistry - A European Journal, 2019, 25 (10), pp.2519-2526. ⟨10.1002/chem.201803685⟩ | Publiée le 18 février 2019
    Article dans une revue

    We present a computational investigation of the triplet excited states of a Rhenium complex electronically coupled with a tryptophan side chain and bound to an azurin protein. In particular, using high-level molecular modelling, we evidence how the electronic properties of the excited state manifolds strongly depend on the coupling with the environment. Indeed, only when explicitly taking into account the protein environment, two stable triplet states of metal-to-ligand charge transfer or charge separated nature can be recovered. Their interconversion gives rise to a ns time scale electron-transfer process observed experimentally. In addition, we also demonstrate how the Re complex plus tryptophan system in a water environment, experiences a too high flexibility preventing the two chromophores to be electronically coupled. This occurrence disables the formation of a charge-separated state, rationalizing the experimental observation. Our successful strategy requires a multiscale approach combining molecular dynamics and quantum chemistry. In this context, we also present the strategy used to parameterize the force fields for the electronic triplet states of the metal complex.

  • Multi-task generative topographic mapping in virtual screening

    Arkadii Lin, Dragos Horvath, Gilles Marcou, Bernd Beck, Alexandre Varnek
    Journal of Computer-Aided Molecular Design, 2019, 33 (3), pp.331-343. ⟨10.1007/s10822-019-00188-x⟩ | Publiée le 9 février 2019
    Article dans une revue

    The previously reported procedure to generate “universal” Generative Topographic Maps (GTMs) of the drug-like chemical space is in practice a multi-task learning process, in which both operational GTM parameters (example: map grid size) and hyperparameters (key example: the molecular descriptor space to be used) are being chosen by an evolutionary process in order to fit/select “universal” GTM manifolds. After selection (a one-time task aimed at optimizing the compromise in terms of neighborhood behavior compliance, over a large pool of various biological targets), for any further use the manifolds are ready to provide “fit-free” predictive models. Using any structure–activity set—irrespectively whether the associated target served at map fitting stage or not—the generation or “coloring” a property landscape enables predicting the property for any external molecule, with zero additional fitable parameters involved. While previous works have signaled the excellent behavior of such models in aggressive three-fold cross-validation assessments of their predictive power, the present work wished to explore their behavior in Virtual Screening (VS), here simulated on hand of external DUD ligand and decoy series that are fully disjoint from the ChEMBL-extracted landscape coloring sets. Beyond the rather robust results of the universal GTM manifolds in this challenge, it could be shown that the descriptor spaces selected by the evolutionary multi-task learner were intrinsically able to serve as an excellent support for many other VS procedures, starting from parameter-free similarity searching, to local (target-specific) GTM models, to parameter-rich, nonlinear Random Forest and Neural Network approaches.

  • Thioether‐Functionalized Quinone‐Based Resorcin[4]arene Cavitands: Electroswitchable Molecular Actuators

    Jovana V. Milić, Thomas Schneeberger, Michal Zalibera, Karolina Z. Milowska, Quy K. Ong, Nils Trapp, Laurent Ruhlmann, Corinne Boudon, Carlo Thilgen, François Diederich
    Helvetica Chimica Acta, 2019, ⟨10.1002/hlca.201800225⟩ | Publiée le 4 février 2019
    Article dans une revue

    The utility of molecular actuators in nanoelectronics requires responsiveness to electric charge by mechanical motion at the interface with conductive surfaces. We hence functionalized redox-active resorcin[4]arene cavitands with thioether groups and investigated their propensity to act as electroswitchable actuators that can adopt two conformations in response to changes in external potential. Molecular design was probed by Density Functional Theory (DFT) calculations that suggest covalent binding of the cavitands to the Au surface in a preferentially upward orientation. The electronic properties were experimentally studied by cyclic voltammetry on Au electrodes, while redox interconversion between the oxidized (quinone, Q) and reduced (semiquinone radical anion, SQ) state was monitored by UV-Vis spectroelectrochemistry and EPR spectroscopy. It was shown that the reduction to the SQ dianions induces a conformational change to a closed form, providing the basis for voltage-controlled molecular actuating devices in the future.

  • Excited-State Reactivity of [Mn(im)(CO) 3 (phen)] + : A Structural Exploration

    Maria Fumanal, Yu Harabuchi, Etienne Gindensperger, Satoshi Maeda, Chantal Daniel
    Journal of Computational Chemistry, 2019, 40 (1), pp.72-81. ⟨10.1002/jcc.25535⟩ | Publiée le 5 janvier 2019
    Article dans une revue

    The electronic excited states reactivity of [Mn(im)(CO) 3 (phen)] + (phen = 1,10-phenanthroline; im = imidazole) ranging between 420 and 330 nm have been analyzed by means of relativistic spin-orbit time-dependent density functional theory and wavefunction approaches (state-average-complete-active-space self-consistent-field/multistate CAS second-order perturbation theory). Minimum energy conical intersection (MECI) structures and connecting pathways were explored using the artificial force induced reaction (AFIR) method. MECIs between the first and second singlet excited states (S 1 /S 2-MECIs) were searched by the single-component AFIR (SC-AFIR) algorithm combined with the gradient projection type optimizer. The structural, electronic, and excited states properties of [Mn(im) (CO) 3 (phen)] + are compared to those of the Re(I) analogue [Re(im)CO) 3 (phen)] +. The high density of excited states and the presence of low-lying metal-centered states that characterize the Mn complex add complexity to the photophysics and open various dissociative channels for both the CO and imidazole ligands.

  • Biosynthesis of Isoprene Units in Euphorbia lathyris Laticifers vs. Other Tissues: MVA and MEP Pathways, Compartmentation and Putative Endophytic Fungi Contribution

    Clément Gastaldo, Agata Lipko, Estelle Motsch, Pierre Adam, Philippe Schaeffer, Michel Rohmer
    Molecules, 2019, 24 (23), pp.4322. ⟨10.3390/molecules24234322⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Euphorbia species are characterized by a net of laticifers producing large amounts of triterpenes. These hydrocarbon-like metabolites can be converted into fuel by the methods of the oil industry. Euphorbia lathyris is easily grown at an industrial scale. In an attempt to increase its triterpene production, the metabolic pathways leading to isoprenoid were investigated by incorporation of 13C labeled glucose and mevalonate and 2H labeled deoxyxylulose as well as by natural abundance isotope ratio GC-MS. Latex triterpenes are exclusively synthesized via the mevalonate (MVA) pathway: this may orient future search for improving the triterpene production in E. lathyris. Phytosterols and their precursors are mainly derived from MVA pathway with a slight contribution of the methylerythritol phosphate (MEP) pathway, whereas phytol is issued from MEP pathway with a minor contribution of the MVA pathway: this is in accordance with the metabolic cross-talk between cytosolic and plastidial compartments in plants. In addition, hopenol B behaved differently from the other latex triterpenes. Its 13C isotope abundance after incorporation of 13C labeled glucose and its natural abundance δ2H signature clearly differed from those of the other latex triterpenes indicating another metabolic origin and suggesting that it may be synthesized by an endophytic fungus.

  • Spirocyclization of keto-ynesulfonamides promoted by quaternary ammonium salts

    Frederic Beltran, Lucile Andna, Laurence Miesch
    Organic Chemistry Frontiers, 2019, 6 (3), pp.373-376. ⟨10.1039/C8QO00937F⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Spirocyclization of keto-ynesulfonamides with quaternary ammonium salts was performed to access aza-spiro compounds. , Spirocyclization of keto-ynesulfonamides with quaternary ammonium salts was performed to access aza-spiro compounds. Exclusive E -configured 5- exo-dig compounds were isolated from keto-ynesulfonamides substituted by an aryl- or a vinyl group, whereas 6- endo-dig compounds were favored from terminal ynesulfonamides.

  • Coumarin derivatives as versatile photoinitiators for 3D printing, polymerization in water and photocomposite synthesis

    Mira Abdallah, Akram Hijazi, Bernadette Graff, Jean-Pierre Fouassier, Giacomo Rodeghiero, Andrea Gualandi, Frederic Dumur, Pier Giorgio Cozzi, Jacques Lalevee
    Polymer Chemistry, 2019, 10 (7), pp.872--884. ⟨10.1039/c8py01708e⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    The goal of this paper concerns the first evaluation of two recently reported coumarins to initiate photopolymerization reactions. These two compounds (CoumA and CoumB) are proposed as high performance visible light photoinitiators and evaluated as photoredox catalysts (PCs), in the presence of an iodonium salt or with an amine, for both the free radical polymerization (FRP) of (meth) acrylates and the cationic polymerization (CP) of epoxides upon visible light exposure using an LED at 405 nm. These coumarin derivatives showed a high photoinitiation ability i. e. excellent polymerization rates and high final monomer conversions were obtained. The photophysical and photochemical properties of the coumarin derivatives were studied in terms of absorption, steady state photolysis and fluorescence spectroscopy. The photoinitiation mechanisms of the coumarin derivatives were discussed from fluorescence quenching, redox behavior and cyclic voltammetry experiments. A full picture of the involved photochemical mechanisms is provided. Coumarin-based systems are high performance photoinitiators, and their use in new photosensitive 3D printing resins will also be presented. Remarkably, CoumB is also found to be very efficient for the preparation of hydrogels under mild conditions due to its high solubility in water i. e. CoumB corresponds to a high-performance water soluble photoinitiator. Finally, the usage of the new coumarin derivatives for photocomposite synthesis with glass fibers (thick samples with a good depth of cure) using a near-UV conveyor (LED @ 395 nm) is particularly outlined.

  • Polyanisotropic Magnetoelectric Coupling in an Electrically Controlled Molecular Spin Qubit

    Jérôme Robert, Nathalie Parizel, Philippe Turek, Athanassios K Boudalis
    Journal of the American Chemical Society, 2019, 141 (50), pp.19765-19775. ⟨10.1021/jacs.9b09101⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Two molecular spin qubits are studied with pulsed Electron Paramagnetic Resonance (EPR) spectroscopy under electric fields to assess their magnetoelectric (ME) couplings and electric spin control. [Fe 3 O(PhCOO) 6 (py) 3 ]ClO 4 ⋅py (Fe 3) is characterized by strong Dzyaloshinskii-Moriya interactions (DMI) which induce important magnetoanisotropy, whereas the DMI in [Cr 3 O(PhCOO) 6 (py) 3 ]ClO 4 ⋅0.5py (Cr 3) is 1-2 orders of magnitude weaker. Fe 3 is observed to demonstrate a clear ME effect whose intensity shows an unprecedented dependence on the molecular orientation within the electric field E (electroanisotropy) and on the relative orientations of the molecular z-axis, the Zeeman field B 0 and E (magnetoelectric anisotropy). The electric control in Fe 3 is shown to be coherent and the ME effect exhibits complex dynamics characterized by saturation and oscillatory effects. On the other hand, Cr 3 exhibits no discernible ME effect, which correlates well with its negligible DMI.

  • Role of PTA in the prevention of Cu(Amyloid-β) induced ROS formation and Amyloid-β oligomerisation in the presence of Zn

    Elena Atrián-Blasco, Elena Cerrada, Peter Faller, M. Laguna, Christelle Hureau
    Metallomics, 2019, 11 (6), pp.1154-1161. ⟨10.1039/C9MT00011A⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Metal-targeting drugs are being widely explored as a possible treatment of Alzheimer’s disease, but most of these ligands are developed to coordinate Cu(II). In a previous communication (Metallomics, 2015, 7, 1229) we have shown another strategy where Cu(I) was targeted with the PTA (1,3,5-triaza-7-phosphaadamantane) ligand that is in addition able to target Cu(II) as well, reduce it and keep it in a safe complexed species. Removal of Cu(II) from the amyloid-β peptide prevents the stabilization of oligomers and protofibrils and the complexation of Cu(I) also stops the formation of reactive oxygen species. Besides, the presence of zinc, which is found in the synaptic cleft in higher concentration than copper, can hamper the ability of metal-targeting drug candidates, an issue that is still poorly considered and studied. Here we show that PTA fully keeps the above described properties even in presence of zinc, thus fulfilling an additional pre-requisite for its use as a model of Cu(I)-targetting drug candidates in the Alzheimer’s disease context.

  • Nickel Metal Nanoparticles as Anode Electrocatalysts for Highly Efficient Direct Borohydride Fuel Cells

    Alexandr Oshchepkov, Guillaume Braesch, Salem Ould-Amara, Gholamreza Rostamikia, Gaël Maranzana, Antoine Bonnefont, Vasiliki Papaefthimiou, Michael Janik, Marian Chatenet, Elena R. Savinova
    ACS Catalysis, 2019, 9 (9), pp.8520-8528. ⟨10.1021/acscatal.9b01616⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Developing cost-effective electrocatalysts for the multielectron borohydride oxidation reaction (BOR) is mandatory to deploy direct borohydride fuel cell (DBFC) systems to power portable and mobile devices. Currently, DBFCs rely on noble metal electrocatalysts and are not capable of fully profiting from the high theoretical DBFC voltage due to the competing hydrogen evolution reaction. Here, highly efficient noble metal-free BOR electrocatalysts based on carbon-supported Ni nanoparticles considerably outperform Pt/C at overpotentials as low as 0.2 V, both in half-cell and in unit fuel cell configurations. Precise control of the oxidation state of surface Ni determines the electrocatalytic activity. Density functional theory (DFT) calculations ascribe the significant activity of Ni compared to Pt, Pd, or Au to a better balance in the adsorption energies of Had, OHad, and B-containing reactive intermediates. These findings suggest design principles for efficient noble metal-free BOR electrocatalysts for DBFCs.

  • Cu(I), Ag(I), Ni(II), Cr(III) and Ir(I) complexes with tritopic NimineCNHCNamine pincer ligands and catalytic ethylene oligomerization

    Xiaoyu Ren, Marcel Wesolek, Pierre Braunstein
    Dalton Transactions, 2019, ⟨10.1039/C9DT02400J⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    With their N-amine and N’-imine substituents, the imidazolium chlorides [(ImH){C(Me)vNDipp}(C2NMe2)] Cl (1) and [(ImH){C(Me)vNDipp}(C3NMe2)]Cl (2) are suitable precursors to pincer-type tritopic NimineCNHCNamine ligands for various transition metals and allow an investigation of the influence of (i) the functionalities associated with the NHC donor and (ii) the length of the spacer connecting the amine group to the heterocycle. The mononuclear Cu(I) complexes [CuCl{Im[C(Me)vNDipp](C2NMe2)-κ1CNHC}] (3) and [CuCl{Im[C(Me)vNDipp](C3NMe2)-κ1CNHC}] (4) were prepared by the reaction of 1 and 2 with mesitylcopper(I), respectively. The reactions of 1 and 2 with Ag2O, in the presence of molecular sieves, afforded the Ag(I) complexes [AgCl{Im[C(Me)vNDipp](C2NMe2)-κ1CNHC}] (5) and [AgCl{Im[C(Me)vNDipp] (C3NMe2)-κ1CNHC}] (6), respectively. A dinuclear Cu(I) complex containing a ladder-type skeleton formed by copper and iodine atoms, [Cu4(μ2-I)2(μ3-I)2{μ-κ2-CNHC,Namine(Im){C(Me)vNDipp}(C3NMe2)}2] (7), was obtained by deprotonation of 2 using sodium trimethylsilylamide/CuI. A transmetallation reaction from 5 to [NiBr2(dme)] afforded an unexpected mixed-metal tetranuclear, centrosymmetric complex [NiCl {Im[C(Me)vNDipp](C2NMe2)-κ1CNHC}{μ2-κ3-Nimine,CNHC,NamineIm[C(Me)vNDipp](C2NMe2)}AgBr2]2 (8), which contains two mononuclear Ni(II) units, one with a κ1CNHC donor and the other with a κ2-Nimine,CNHC chelating and μ2-CNHC,Namine bridging ligand. These two monocationic complexes are connected by the dianonic, disilver unit [Ag2Br4]2−. Furthermore, the mononuclear tritopic Ni(II) pincer complexes [Ni(NCMe) {Im[C(Me)vNDipp](C2NMe2)-κ3Nimine,CNHC,Namine}][BF4]2 (9) and [Ni(NCMe){Im[C(Me)vNDipp](C3NMe2)- κ3Nimine,CNHC,Namine}][BF4]2 (10) were obtained when [Ni(NCMe)6](BF4)2 was used as a precursor in trans- metallation reaction with 9 and 10, respectively. Transmetallation from the silver complexes 5 and 6 was also applied to the synthesis of chromium complexes and whether [CrCl2(THF)2] or [CrCl3(THF)3] was used as a precursor, the same chromium(III) complexes, mer-[CrCl3{Im[C(Me)vNDipp](C2NMe2)-κ3Nimine,CNHC, Namine}] (11) and mer-[CrCl3{Im[C(Me)vNDipp](C3NMe2)-κ3Nimine,CNHC,Namine}] (12), respectively, were isolated. Moreover, silver transmetalation reactions from 5 and 6 were successfully applied to the Ir(I) pre- cursor [Ir(μ-Cl)(cod)]2 (cod = 1,5-cycloocadiene) and the Ir(I) complexes [IrCl(cod){Im[C(Me)vNDipp] (C2NMe2)-κ1CNHC}] (13) and [IrCl(cod) {Im[C(Me)vNDipp](C3NMe2)-κ1CNHC}] (14), respectively, containing a monodentate NHC ligand were isolated as yellow crystals in good yields. The cationic, Nimine,CNHC-che- lated Ir(I) complexes [Ir(cod){Im[C(Me)vNDipp](C2NMe2)-κ2Nimine,CNHC}]BF4 (15) and [Ir(cod){Im[C(Me)v NDipp](C3NMe2)-κ2Nimine,CNHC}]BF4 (16) were obtained by halide abstraction from 13 and 14, respectively. The following 10 complexes 3, 6, 7, 8·2Et2O, 9–11, 12·2C7H8, 14 and 16·THF were characterized by X-ray diffraction analysis. In catalytic ethylene oligomerization, the Ni complex 10 showed a productivity of 14 600 gC2H4 per (gNi h), giving 65% butenes and 30% hexenes. With the Cr complex 12, the productivity was up to 9200 gC2H4 per (gCr h) and a very high selectivity for α-olefins was observed, from C4 to C8.

  • Trichogin GA IV Alignment and Oligomerization in Phospholipid Bilayers

    Evgeny Salnikov, Marta De zotti, Sara Bobone, Claudia Mazzuca, Jesus Raya, Alvaro S. Siano, Cristina Peggion, Claudio Toniolo, Lorenzo Stella, Burkhard Bechinger
    ChemBioChem, 2019, 10th IPS, 20 (16), pp.2141-2150. ⟨10.1002/cbic.201900263⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Trichogin GA IV is a short peptaibol with antimicrobial activity. This uncharged, but amphipathic, sequence is aligned at the membrane interface and undergoes a transition to an aggregated state that inserts more deeply into the membrane, an assembly that predominates at a peptide‐to‐lipid ratio (P/L) of 1:20. In this work, the natural trichogin sequence was prepared and reconstituted into oriented lipid bilayers. The 15N NMR chemical shift is indicative of a well‐defined alignment of the peptide parallel to the membrane surface at P/Ls of 1:120 and 1:20. When the P/L is increased to 1:8, an additional peptide topology is observed that is indicative of a heterogeneous orientation, with helix alignments ranging from around the magic angle to perfectly in‐plane. The topological preference of the trichogin helix for an orientation parallel to the membrane surface was confirmed by attenuated total reflection FTIR spectroscopy. Furthermore, 19F CODEX experiments were performed on a trichogin sequence with 19F‐Phe at position 10. The CODEX decay is in agreement with a tetrameric complex, in which the 19F sites are about 9–9.5 Å apart. Thus, a model emerges in which the monomeric peptide aligns along the membrane surface. When the peptide concentration increases, first dimeric and then tetrameric assemblies form, made up from helices oriented predominantly parallel to the membrane surface. The formation of these aggregates correlates with the release of vesicle contents including relatively large molecules.

  • Tumour-targeting photosensitisers for one- and two-photon activated photodynamic therapy

    Sébastien Jenni, Angélique Sour, Frédéric Bolze, Barbara Ventura, Valérie Heitz
    Organic & Biomolecular Chemistry, 2019, 17 (27), pp.6585-6594. ⟨10.1039/c9ob00731h⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Despite the advantages of photodynamic therapy (PDT) over chemotherapy or radiotherapy such as low side effects, lack of treatment resistance and spatial selectivity inherent to light activation of the drug, several limitations especially related to the photosensitiser (PS) prevent PDT from becoming widespread in oncology. Herein, new folic acid- and biotin-conjugated PSs for tumour-targeting PDT are reported, with promising properties related to PDT such as intense absorption following one-photon excitation in the red or two-photon excitation in the near-infrared, and also high singlet oxygen quantum yield (close to 70% in DMSO). Cellular studies demonstrated that both targeted PSs induced phototoxicity, the folate-targeted PS being the most effective one with 80% of cell death following 30 min of irradiation and a phototoxicity four times higher than that of the non-targeted PS. This result is in accordance with the uptake of the folate-targeted PS in HeLa cells, mediated by the folate receptors. Moreover, this folate-targeted PS was also phototoxic following two-photon excitation at 920 nm, opening new perspectives for highly selective PDT treatment of small and deep tumours.

  • Measurement of white wines resistance against oxidation by Electron Paramagnetic Resonance spectroscopy

    Maria Nikolantonaki, Christian Coelho, Laurence Noret, Marie Zerbib, Bertrand Vileno, Dominique Champion, Régis Gougeon
    Food Chemistry, 2019, 270, pp.156 - 161. ⟨10.1016/j.foodchem.2018.07.052⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Free radical theory of aging hypothesizes that oxygen-derived radicals are responsible for the storage-related flavor instability in wine. In an optimal situation, a balanced-distribution exists between oxidants and antioxidants among wines intrinsic/extrinsic metabolites. Based on the kinetic study of POBN-1-hydroxyethyl spin adduct (POBN-1-HER) formation in wines initiated via the Fenton reaction, a novel tool based on EPR spin trapping methodology was developed to quantify wines resistance against oxidation. Antioxidant capacities of wines were evaluated according to POBN-1-HER maximum signal intensity (Imax POBN-1-HER) and rate formation (r(POBN-1-HER)) kinetic parameters. Low Imax POBN-1-HER and r(POBN-1-HER) values suggest that endogenous antioxidants in wine are able to quench a substantial amount of radicals capable to take part in deleterious oxidative reactions. This will be very valuable in understanding aging potential and will provide an avenue to better control the process by knowing how it might be possible to change wines resistance against oxidation.

  • A Straightforward Approach to Multifunctional Graphene

    Matteo Andrea Lucherelli, Jesus Raya, Konstantin Edelthalhammer, Frank Hauke, Andreas Hirsch, Gonzalo Abellán, Alberto Bianco
    Chemistry - A European Journal, 2019, 25 (57), pp.13218-13223. ⟨10.1002/chem.201903165⟩ | Publiée le 1 janvier 2019
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    Graphene has been covalently functionalized through a one-pot reductive pathway using graphite intercalation compounds (GICs), in particular KC8, with three different orthogonally protected derivatives of 4-aminobenzylamine. This novel multifunctional platform exhibits excellent bulk functionalization homogeneity (Hbulk) and degree of addition while preserving the chemical functionalities of the organic addends through different protecting groups, namely: tert-butyloxycarbonyl (Boc), benzyloxycarbonyl (Cbz) and phthalimide (Pht). We have employed (temperature-dependent) statistical Raman spectroscopy (SRS), X-ray photoelectron spectroscopy (XPS), magic angle spinning solid state 13C NMR (MAS-NMR), and a characterization tool consisting of thermogravimetric analysis coupled with gas chromatography and mass spectrometry (TG-GC-MS) to unambiguously demonstrate the covalent binding and the chemical nature of the different molecular linkers. This work paves the way for the development of smart graphene-based materials of great interest in biomedicine or electronics, to name a few, and will serve as a guide in the design of new 2D multifunctional materials

  • Relevance of Dzyaloshinskii–Moriya spectral broadenings in promoting spin decoherence: a comparative pulsed-EPR study of two structurally related iron( iii ) and chromium( iii ) spin-triangle molecular qubits

    Jérôme Robert, Nathalie Parizel, Philippe Turek, Athanassios K Boudalis
    Physical Chemistry Chemical Physics, 2019, 21 (35), pp.19575-19584. ⟨10.1039/c9cp03422f⟩ | Publiée le 1 janvier 2019
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    Spectral broadenings due to Dzyaloshinskii-Moriya interactions (DMI) were assessed with respect to the decoherence they induce through increased spin-spin interactions, as the role of DMI in developing magnetoelectric spin-chirality qubits is gaining recognition. The structurally related spin triangles [Fe 3 O(PhCOO) 6 (py) 3 ]ClO 4 ⋅py (Fe 3) and [Cr 3 O(PhCOO) 6 (py) 3 ]ClO 4 ⋅0.5py (Cr 3) were studied as frozen py-d 5 solutions with various pulsed Electron Paramagnetic Resonance (EPR) spectroscopy experiments, and under identical experimental conditions. Field-swept Hahn echo experiments revealed a match with continuous-wave (CW) spectra, while variable-temperature saturation/inversion recovery and Hahn echo decay experiments were used to extract the thermal evolutions of the spin-lattice relaxation and phase-memory times (T 1 and T m , respectively). Nutation experiments revealed Rabi oscillations demonstrating that the spins of the complexes could be coherently manipulated. Careful comparisons of T M times confirmed hyperfine interactions with the magnetic nuclei of the metal ions as an intrinsic source of decoherence. Comparisons of Rabi damping times revealed that DMI-induced spectral broadenings play a discernible but moderate role as an extrinsic source of decoherence for the nutation experiments and that they are not particularly detrimental to spin manipulations.

  • Borylation and rearrangement of alkynyloxiranes: a stereospecific route to substituted α-enynes

    Ruben Pomar Fuentespina, José Angel Garcia de La Cruz, Gabriel Durin, Victor Mamane, Jean-Marc Weibel, Patrick Pale
    Beilstein Journal of Organic Chemistry, 2019, 15, pp.1416-1424. ⟨10.3762/bjoc.15.141⟩ | Publiée le 1 janvier 2019
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    1,3-Enynes are important building blocks in organic synthesis and also constitute the key motif in various bioactive natural products and functional materials. However, synthetic approaches to stereodefined substituted 1,3-enynes remain a challenge, as they are limited to Wittig and cross-coupling reactions. Herein, stereodefined 1,3-enynes, including tetrasubstituted ones, were straightforwardly synthesized from cis or trans-alkynylated oxiranes in good to excellent yields by a one-pot cascade process. The procedure relies on oxirane deprotonation, borylation and a stereospecific rearrangement of the so-formed alkynyloxiranyl borates. This stereospecific process overall transfers the cis or trans-stereochemistry of the starting alkynyloxiranes to the resulting 1,3-enynes. 1416

  • Palladium complexes of N-heterocyclic carbenes displaying an unsymmetrical N-alkylfluorenyl/N'-aryl substitution pattern and their behaviour in Suzuki-Miyaura cross coupling

    Hamze Almallah, Eric Brenner, Dominique Matt, Jack Harrowfield, Mohamad Jahjah, Akram Hijazi
    Dalton Transactions, 2019, 48 (38), pp.14516-14529. ⟨10.1039/C9DT02948F⟩ | Publiée le 1 janvier 2019
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    A series of new Pd-PEPPSI complexes containing imidazolylidene ligands with a mixed 9-alkyl-9-fluorenyl/aryl N,N'-substitution pattern have been synthesised. Single crystal X-ray diffraction studies were carried out for four complexes, which revealed that the N-heterocyclic carbene ligands display a semi-open, unsymmetrical space occupancy about the metal. Despite their particular unsymmetrical shape, the new complexes were found to perform as well in Suzuki-Miyaura cross coupling (dioxane, 80 °C) as previously reported, highly active analogues bearing two sterically protecting 9-alkylfluorenyl substituents. They were further found to be considerably more active than the standard Pd-PEPPSI complexes [PdCl2IMes(pyridine)] and [PdCl2IPr(pyridine)]. Surprisingly, unlike the latter, the unsymmetrical complexes of this study were practically inactive in isopropanol at 80 °C. Under these conditions the complexes appear to decompose with formation of non-stabilised nanoparticles.[on SciFinder (R)]

  • A New Polyethylene Composite Material Based on Nano Silver Particels Loaded Graphene Oxide

    Feng Zhang, Kai-Li Zhang, Ming-Ming Zhou, Chao Chen, Zhi-Wei Cai, Guo-Hui Wei, Xing-Mao Jiang, Cheng Zhang, Laurent Ruhlmann, Yao-Kang Lü
    Journal of Inorganic Materials, 2019, 34 (6), pp.633. ⟨10.15541/jim20180372⟩ | Publiée le 1 janvier 2019
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    A new nano silver particels loaded graphene oxide (AgNPs@GO) was obtained through ultrasonic assisted liquid phase method. In AgNPs@GO, nano silver particels (AgNPs) are mainly anchored at oxygen containing groups and defects of graphene oxide (GO) sheets, part of GO sheets are reduced and some Ag(0) atoms have been oxidized to Ag+ ions. AgNPs@GO exhibits significantly stronger ability for inhibiting Pseudomonas aeruginosa than that of AgNPs and GO. Therefore, AgNPs@GO was further introduced to polyethylene (PE) matrix as an additive to prepare a new composite material 0.48wt%-AgNPs@GO/PE. Compare with bare PE and AgNPs doped PE composites, 0.48wt%-AgNPs@GO/PE not only has a better antibacterial ability and stronger water vapor barrier property, but also dissolves out less nonvolatile substance than PE in water and ethanol solution.

  • Triggering Cu-coordination change in Cu( ii )-Ala-His-His by external ligands

    Paulina Gonzalez, Karolina Bossak-Ahmad, Bertrand Vileno, Nina E Wezynfeld, Youssef El Khoury, Petra Hellwig, Christelle Hureau, Wojciech Bal, Peter Faller
    Chemical Communications, 2019, 55 (56), pp.8110-8113. ⟨10.1039/c9cc03174j⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Cu(II) forms well-known and stable complexes with peptides having histidine at position 2 (Xxx-His) or 3 (Xxx-Zzz-His). Their properties differ considerably due to the histidine positioning. Here we report that in the hybrid motif Xxx-His-His, the Cu(II)-complexes can be switched between the Xxx-His and the Xxx-Zzz-His coordination modes by addition of external ligands.

  • Metal-free synthesis of activated ynesulfonamides and tertiary enesulfonamides

    Lucile Andna, Laurence Miesch
    Organic & Biomolecular Chemistry, 2019, 17 (23), pp.5688-5692. ⟨10.1039/C9OB00947G⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    An operationally simple synthesis of activated ynesulfonamides and enesulfonamides is described. , An operationally simple synthesis of activated ynesulfonamides and enesulfonamides is described. Ynesulfonamides can be obtained through reaction of sulfonylamides with activated bromoalkynes and Triton B in a short time at room temperature. Likewise, terminal alkynes react with sulfonylamides to provide enesulfonamides. Z / E enesulfonamides can be transformed exclusively into E enesulfonamides.

  • Extraction and complexation of lanthanide ions by dihomooxacalix[4]arene and calix[4]arene tetraketone derivatives: An experimental and molecular dynamics investigation

    Joel Fonseca, Paula Marcos, José Ascenso, Sylvia Michel, Véronique Hubscher-Bruder, Rachel Schurhammer
    Comptes Rendus. Chimie, 2019, 22 (9-10), pp.639-647. ⟨10.1016/j.crci.2019.09.005⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Lanthanide cation binding by tetraketone derivatives of p-tert-butyldihomooxacalix[4]arene (methyl 1a, tert-butyl 1b, adamantyl 1c and phenyl 1d) and of p-tert-butylcalix[4]arene (methyl 2a, adamantyl 2c and phenyl 2d), in the cone conformation, was investigated. These properties were assessed by extraction experiments of the metal picrates from water to dichloromethane and by stability constant measurements in acetonitrile by UV-vis absorption spectrophotometry. Proton NMR titrations with La3+, Eu3+ and Yb3+ cations were also performed to obtain information on the binding sites. Molecular dynamics (MD) simulations and potential of mean force (PMF) free energy calculations were carried out for ligands 1d and 2d in pure solvents and at a CH2Cl2/water interface to add further information on the complexation and extraction processes. Comparison between dihomooxacalix[4]arene and calix[4]arene ketone derivatives showed that the former are better extractants, displaying the highest percentages of extraction for Gd3+ and Yb3+ cations. Concerning complexation, all ligands studied presented high affinities for the lanthanide ions. Ligands 1b and 1d showed preference for the light La3+, while 2d displayed the strongest affinity for the heavy and smaller Yb3+. These results were also corroborated by MD simulations, which revealed specificities of ligands 1d and 2d in the binding of lanthanide cations.

  • Controlled Growth of Porphyrin Wires at a Solid‐Liquid Interface

    Christophe Kahlfuss, Yoshihiro Kikkawa, Jennifer A. Wytko, Jean Weiss
    Helvetica Chimica Acta, 2019, 102 (5), pp.e1900058. ⟨10.1002/hlca.201900058⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Bis(zinc porphyrin) scaffolds bearing C8 or C18 alkyl chains and imidazole end groups self‐assembled in a head‐to‐tail fashion into multi‐porphyrin assemblies on both HOPG and mica. Due to weaker molecule surface‐interactions, longer arrays formed on mica than on HOPG. In both cases, it was essential first to generate monomers that were drop casted on the surface, then to allow time for the bis(zinc porphyrins) to assemble. Although thicker fibrous assemblies were observed with the C8 alkyl substituents than with the longer chains, noncovalent assemblies up to 1 μm long were observed for each molecule. These investigations provide a reproducible, noncovalent method to grow porphyrin arrays that may be of interest in molecular electronics for charge transport.

  • Luminescent imidazolium–naphthalene salts in liquid and solid states

    Matthieu L’her, Youssef Atoini, Julien Fouchet, Benoît Heinrich, Nicolas Del-Giudice, Emma Scrafton, Emilie Bordes, Lydia Karmazin, Loïc J. Charbonnière, Luisa de Cola, Laurent Douce
    New Journal of Chemistry, 2019, 43 (32), pp.12529-12532. ⟨10.1039/c9nj02972a⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    This article describes highly luminescent ionic compounds in liquid and crystalline states, where a naphthalene moiety is conjugated to an imidazolium center decorated with alkyl chains of different lengths. We have characterized, by X-ray diffraction of a single crystal and the liquid, that these compounds are organized in rod-shaped assemblies. The formation of this molecular architecture is governed by ionic interactions that dominate those of the lesser π–π and van der Waals interactions. Consequently, aromatic naphthalene rings are confined to the environment of alkyl chains (diluted in an apolar solvent), thus avoiding the extinction of luminescence by the formation of chromophore excimers, as shown in photophysical data.

  • The Motion of an Azobenzene Light‐Controlled Switch: A Joint Theoretical and Experimental Approach

    Bérangère Godde, Abdelaziz Jouaiti, Matteo Mauro, Roberto Marquardt, Alain Chaumont, Vincent Robert
    ChemSystemsChem, 2019, 1 (3), pp.e1900003. ⟨10.1002/syst.201900003⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    To gain further insight into the internal motion of molecular objects, we have synthesized a molecular turnstile AzoT composed of a rotor based on flexible tetraethyleneglycol (TEG) chains grafted on aromatic moieties and a stator containing a photoswitchable azobenzene (Azo) fragment. The control of the reversible light‐induced E‐AzoT⇆Z‐AzoT isomerization is supported by both NMR spectroscopy and photophysical investigation, which show that the system exhibits a fatigueless isomerization switching process. Furthermore, 2D NMR spectroscopy points to the fact that the free internal motion is triggered by the E‐AzoT⇆Z‐AzoT isomerization. Using molecular dynamics simulations and DFT calculations we have investigated the nature of the internal motions. An internal rotation characterized by an energy barrier of 23 kJ/mol is found for the Z‐AzoT isomer. In contrast, this barrier reaches 151 kJ/mol for the E‐AzoT isomer, excluding any “classical” rotation at room temperature. This rotational movement could in principle occur via tunneling. A simple model calculation, however, excludes tunnelling to take place before 20 ms.

  • Hydrogen bond directed molecular recognition in water in a strapped-porphyrin-cyclodextrin assembly

    Hiroaki Kitagishi, Kazuki Ohara, Daiki Shimoji, Maxime Vonesch, Jean Weiss, Jennifer Wytko
    Journal of Porphyrins and Phthalocyanines, 2019, 23 (4-5), pp.569-574. ⟨10.1142/S1088424619500494⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    A water soluble, phenanthroline-strapped zinc porphyrin bearing four arylsulfonate groups formed a stable host–guest complex with two per-O-methylated β-cyclodextrin cavities. In the host–guest assembly, the zinc porphyrin was capable of binding imidazole within the cavity between the zinc(II) ion and the phenanthroline strap in an aqueous medium. The formation of a hydrogen bond between the imidazole NH and the nitrogen atoms of the phenanthroline was an essential element of the binding event, as shown by comparative binding studies with a non-strapped tetrasulfonated zinc porphyrin and with N-methylimidazole. This hydrogen bonding in an aqueous medium was possible due to the protected hydrophobic environment created by the cyclodextrins around the phenanthroline strap. This type of binding event may provide a biomimetic approach to study water soluble heme protein models.

  • Dynamic Nuclear Polarization/solid-state NMR of membranes. Thermal effects and sample geometry

    Evgeniy Sergeevich Salnikov, Fabien Aussenac, Sebastian Abel, Armin Purea, Paul Tordo, Olivier Ouari, Burkhard Bechinger
    Solid State Nuclear Magnetic Resonance, 2019, 100, pp.70--76. ⟨10.1016/j.ssnmr.2019.03.004⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Whereas specially designed dinitroxide biradicals, reconstitution protocols, oriented sample geometries and NMR probes have helped to much increase the DNP enhancement factors of membrane samples they still lag considerably behind those obtained from glasses made of protein solutions. Here we show that not only the MAS rotor material but also the distribution of the membrane samples within the NMR rotor have a pronounced effect on the DNP enhancement. These observations are rationalized with the cooling efficiency and the internal properties of the sample, monitored by their T-1 relaxation, microwave ON versus OFF signal intensities and DNP effect. The data are suggestive that for membranes the speed of cooling has a pronounced effect on the membrane properties and concomitantly the distribution of biradicals within the sample.

  • Recent studies of docking and molecular dynamics simulation for liquid-phase enantioseparations

    Paola Peluso, Alessandro Dessì, Roberto Dallocchio, Victor Mamane, Sergio Cossu
    Electrophoresis, In press, 2019, 40, pp.1881-1896. ⟨10.1002/elps.201800493⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Abbreviations: ADMPC, amylose tris(3,5-dimethylphenylcarbamate); AMBER, assisted model 15 building with energy refinement; CCMPC, cellulose tris(3-chloro-4-methylphenylcarbamate); CCPC, 16 cellulose tris(3-chlorophenylcarbamate); CDCPC, cellulose tris(3,5-dichlorophenylcarbamate); 17 CDMPC, cellulose tris(3,5-dimethylphenylcarbamate); CF, cyclofructan; CHARMM, chemistry at 18 Harvard macromolecular mechanics; CM, carboxymethyl; CMB, cellulose tris(4-19 methylphenylbenzoate); CSP, chiral stationary phase; DC, dielectric constant; EEO, enantiomer elution 20 order; EMO, enantiomer migration order; ESH, explicit -hole; GOLD, genetic optimisation for ligand 21 docking; HB, hydrogen bond; HBA, hydrogen bond acceptor; HBD, hydrogen bond donor; ITC, 22 isothermal titration calorimetry; LGA, Lamarckian genetic algorithm; MD, molecular dynamics; 23 MeOH, methanol; MM, molecular mechanics; MP, mobile phase; NP, normal phase; PABA, p-24 aminobenzoic acid; PEP, positive extra point; PO, polar organic; RMSD, root mean square deviation; 25 SFC, supercritical fluid chromatography. 26 27

  • A Noncovalent Interaction Insight onto the Concerted Metallation Deprotonation Mechanism

    Yann Cornaton, Jean-Pierre Djukic
    Physical Chemistry Chemical Physics, 2019, 21 (36), pp.20486-20498. ⟨10.1039/C9CP03650D⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    The CMD/AMLA mechanisms of cyclopalladation and the parent fictitious but challenging cyclonickelation of N,N-dimethylbenzylamine have been investigated by joint DFT-D and DLPNO-CCSD(T) methods assisted by QTAIM-based noncovalent interaction plots (NCI plots) and interacting quantum atoms (IQA) analyses, and the local energy decomposition (LED) procedure. Bader charges, NCI plots, IQA and the LED analyses clearly suggest that coulombic interactions play an important role and somewhat govern the whole process that is sensitive to the charge borne by the metal centre. It is found that replacement of acetate by acetamidate used as a ligand and a base significantly lowers the barrier to the formation of the key agostic intermediate. The latter shows a peculiar polarization by its immediate ligand environment where a significant electrostatic CH⋯O interaction with the neighboring carboxylato ligand competes with the strong propensity of the latter to bind the metal center, which is stronger in the agostic intermediate when the carboxylato ligand is the acetate and when the metal is Ni. It is also shown that the hereby idealized cyclonickelation is disfavored as compared to cyclopalladation owing to enhanced electrostatic repulsion in almost all stages of the CMD mechanism.

  • A Promiscuous CYP706A3 Reduces Terpene Volatile Emission from Arabidopsis Flowers, Affecting Florivores and the Floral Microbiome

    Benoit Boachon, Yannick Burdloff, Ju-Xin Ruan, Rakotoharisoa Rojo, Robert R. Junker, Bruno Vincent, Florence Nicolè, Françoise Bringel, Agnes Lesot, Laura Henry, Jean-Etienne Bassard, Sandrine Mathieu, Lionel Allouche, Ian Kaplan, Natalia Dudareva, Stéphane Vuilleumier, Laurence Miesch, François André, Nicolas Navrot, Xiao-Ya Chen, Danièle Werck-Reichhart
    The Plant cell, 2019, 31 (12), pp.2947-2972. ⟨10.1105/tpc.19.00320⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Flowers are essential but vulnerable plant organs, exposed to pollinators and florivores, yet surprisingly, flower chemical defenses were rarely investigated. We show here that two clustered terpene synthase and cytochrome P450 encoding genes (TPS11 and CYP706A3) on chromosome 5 of Arabidopsis thaliana are tightly co-expressed in floral tissues, upon anthesis and during floral bud development. TPS11 was previously reported to generate a blend of sesquiterpenes. By heterologous co-expression of TPS11 and CYP706A3 in yeast and Nicotiana benthamiana, we demonstrate that CYP706A3 metabolizes TPS11 products and also further oxidizes its primary oxidation products. Analysis of headspace and soluble metabolites of CYP706A3 insertion and overexpression mutants indicates that CYP706A3-mediated metabolism largely suppresses sesquiterpene and most monoterpene emission from opening flowers, and generates terpene oxides retained in floral tissues. In flower buds, concerted expression of TPS11 and CYP706A3 also suppresses volatile emission and generates soluble sesquiterpene oxides. Florivory assays performed with the Brassicaceae specialist Plutella xylostella demonstrate that insect larvae avoid feeding on bud expressing CYP706A3 and accumulating terpene oxides. In addition, CYP706A3 expression deeply alters composition of the floral microbiome. TPS11 and CYP706A3 co-evolved with Brassicaceae to form the smallest and most versatile functional gene cluster so far described in higher plants.

  • Phenothiazine derivatives as photoredox catalysts for cationic and radical photosensitive resins for 3D printing technology and photocomposite synthesis

    Mira Abdallah, Thanh-Tuan Bui, Fabrice Goubard, Dimitra Theodosopoulo, Frederic Dumur, Akram Hijazi, Jean-Pierre Fouassier, Jacques Lalevee
    Polymer Chemistry, 2019, 10 (45), pp.6145--6156. ⟨10.1039/c9py01265f⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    This study highlights the use of four new phenothiazine derivatives (denoted as B compounds: B106, B107, B108, and B111), which are synthesized and proposed as high performance visible light photoinitiators, in combination with an iodonium salt, in both the free radical polymerization (FRP) of acrylates and the cationic polymerization (CP) of epoxides upon visible light exposure using a cheap and safe Light Emitting Diode (LED) at 405 nm. Remarkably, two of them (B108 and B111) are also evaluated as photoredox catalysts (PCs). These phenothiazine compounds can also be used in three-component photoinitiating systems with an iodonium salt and an amine (e.g. N-phenylglycine (NPG)) for the FRP of acrylates upon irradiation with a LED@405 nm. They showed an outstanding polymerization photoinitiation ability; that is, excellent polymerization rates and high final reactive function conversions were obtained. The photoinitiation mechanisms were investigated through different techniques including RT-FTIR, UV-visible spectroscopy, fluorescence spectroscopy, cyclic voltammetry and electron paramagnetic resonance. A full picture of the involved photochemical mechanisms is provided. As high performance photoinitiators, phenothiazine-based systems are especially used in new radical photosensitive 3D printing resins to improve the depth of cure, ensuring the formation of very thick 3D printed polymers. Finally, the use of these new phenothiazine derivatives for the access to thick glass fiber composites using a near-UV conveyor (LED@395 nm) is outlined i.e. thick and filled samples again requiring improved depth of cure.

  • Molecular Theranostic Agents for Photodynamic Therapy (PDT) and Magnetic Resonance Imaging (MRI)

    Sébastien Jenni, Angélique Sour
    Inorganics, 2019, 7 (1), pp.10. ⟨10.3390/inorganics7010010⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Magnetic resonance imaging (MRI) is a powerful non-invasive diagnostic tool that can provide important insights for medical treatment monitoring and optimization. Photodynamic therapy (PDT), a minimally invasive treatment for various types of tumors, is drawing increasing interest thanks to its temporal and spatial selectivity. The combination of MRI and PDT offers real-time monitoring of treatment and can give significant information for drug-uptake and light-delivery parameters optimization. In this review we will give an overview of molecular theranostic agents that have been designed for their potential application in MRI and PDT.

  • Self-Complementary and Narcissistic Self-Sorting of bis-Acridinium Tweezers

    Henri-Pierre Jacquot de Rouville, Christophe Gourlaouen, Valérie Heitz
    Dalton Transactions, 2019, 48, pp.8725 - 8730. ⟨10.1039/C9DT01465A⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    A molecular tweezer incorporating two acridinium moieties linked by a 1,3-dipyridylbenzene spacer was synthesized in three steps. The formation of its self-complementary dimer in water was demonstrated as the result of pi-pi stacking and hydrophobic interactions. Moreover, a 1:1 mixture of this bis-acridinium tweezer with one build on a 2,6-diphenylpyridyl spacer evidenced a narcissistic self-sorting behaviour in water.

  • A redox ruthenium compound directly targets PHD2 and inhibits the HIF1 pathway to reduce tumor angiogenesis independently of p53

    Vania Vidimar, Cynthia Licona, Ricardo Cerón-Camacho, Eric Guérin, Pierre Coliat, Aina Venkatasamy, Moussa Ali, Dominique Guenot, Ronan Le Lagadec, Alain Jung, Jean-Noël Freund, Michel Pfeffer, Georg Mellitzer, Gianni Sava, Christian Gaiddon
    Cancer Letters, 2019, 440-441, pp.145-155. ⟨10.1016/j.canlet.2018.09.029⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Targeting specific tumor metabolic needs represents an actively investigated therapeutic strategy to bypass tumor resistance mechanisms. In this study, we describe an original approach to impact the cancer metabolism by exploiting the redox properties of a ruthenium organometallic compound. This organometallic complex induced p53-independent cytotoxicity and reduced size and vascularization of patients-derived tumor explants that are resistant to platinum drugs. At the molecular level, the ruthenium complex altered redox enzyme activities and the intracellular redox state by increasing the NAD+/NADH ratio and ROS levels. Pathway analysis pointed to HIF-1 as a top deregulated metabolite pathway. Unlike cisplatin, treatment with the ruthenium complex decreased HIF1A protein levels and expression of HIF1A target genes. The rapid downregulation of HIF1A protein levels involved a direct interaction of the ruthenium compound with the redox enzyme PHD2, a HIF1A master regulator. HIF1A inhibition led to decreased angiogenesis in patient-derived xenografted using fragments of primary human colon tumors. Altogether, our results show that a ruthenium compound impacts metabolic pathways acting as anticancer agents in colon cancer via an original mechanism of action that affects redox enzymes differently than platinum-based drugs.

  • Decoupling the roles of carbon and metal oxides on the electrocatalytic reduction of oxygen on La 1−x Sr x CoO 3−δ perovskite composite electrodes

    J. Tyler Mefford, Aleksandr A. Kurilovich, Jennette Saunders, William G. Hardin, Artem M. Abakumov, Robin P. Forslund, Antoine Bonnefont, Sheng Dai, Keith P. Johnston, Keith J. Stevenson
    Physical Chemistry Chemical Physics, 2019, 21 (6), pp.3327-3338. ⟨10.1039/C8CP06268D⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Perovskite oxides are active room-temperature bifunctional oxygen electrocatalysts in alkaline media, capable of performing the oxygen reduction reaction (ORR) and oxygen evolution reaction (OER) with lower combined overpotentials relative to their precious metal counterparts. However, their semiconducting nature necessitates the use of activated carbons as conductive supports to generate applicably relevant current densities. In efforts to advance the performance and theory of oxide electrocatalysts, the chemical and physical properties of the oxide material often take precedence over contributions from the conductive additive. In this work, we find that carbon plays an important synergistic role in improving the performance of La1−xSrxCoO3−δ (0 ≤ x ≤ 1) electrocatalysts through the activation of O2 and spillover of radical oxygen intermediates, HO2− and O2−, which is further reduced through chemical decomposition of HO2− on the perovskite surface. Through a combination of thin-film rotating disk electrochemical characterization of the hydrogen peroxide intermediate reactions (hydrogen peroxide reduction reaction (HPRR), hydrogen peroxide oxidation reaction (HPOR)) and oxygen reduction reaction (ORR), surface chemical analysis, HR-TEM, and microkinetic modeling on La1−xSrxCoO3−δ (0 ≤ x ≤ 1)/carbon (with nitrogen and non-nitrogen doped carbons) composite electrocatalysts, we deconvolute the mechanistic aspects and contributions to reactivity of the oxide and carbon support.

  • Metallated Container Molecules: A Capsular Nickel Catalyst for Enhanced Butadiene Polymerisation.

    Fethi Elaieb, Soheila Sameni, Mouhamad Awada, Catherine Jeunesse, Dominique Matt, Loic Toupet, Jack Harrowfield, Daisuke Takeuchi, Shigenaga Takano
    European Journal of Inorganic Chemistry, 2019, 2019 (43), pp.4690-4694. ⟨10.1002/ejic.201901074⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    A unique, covalently constructed capsular catalyst obtained by reaction of [Ni(η5-C5H5)(1,5-cyclooctadiene)] BF4 with the double-calixarene-derived diphosphine 1,3-bis(5-diphenylphosphino-25,26,27,28-tetrapropoxycalix[4]aren-17-yl)benzene (1) was shown to polymerize butadiene at a rate considerably superior to that of previously known catalysts. The reported results indicate that the container structure of the covalent complex is retained during catalysis. [on SciFinder(R)]

  • Original polymorphism in a naphthalene bisimide π-conjugated organogelator: a complex interplay between hydrogen bonding and heterocycle π-stacking

    Morgane Diebold, Elliot Christ, Laure Biniek, Lydia Karmazin, Benoît Heinrich, Christophe Contal, Suhrit Ghosh, Philippe Mesini, Martin Brinkmann
    Journal of Materials Chemistry C, 2019, ⟨10.1039/C9TC04402G⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    This study focuses on the structure of different supramolecular assemblies formed in the gel phase and in the solid state by a naphthalene-bisimide organogelator: N,N'-di(1-(3,4,5tri(octyloxy)benzamido))eth-1yl naphthalene-1,4,5,8 tetracarboxylic acid bisimide (NDI2). This molecule is formed by a naphthalene bisimide core with symmetric dendrons composed of a flexible alkyl linker, an amide group and a trialkoxyphenyl group. The structure, especially

  • Solid-State NMR Investigations of the MHC II Transmembrane Domains: Topological Equilibria and Lipid Interactions

    Christopher Aisenbrey, Evgeniy Salnikov, Burkhard Bechinger
    Journal of Membrane Biology, 2019, 252 (4-5), pp.371-384. ⟨10.1007/s00232-019-00071-8⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    The major histocompatibility complex class II (MHC II) membrane proteins are key players in the adaptive immune response. An aberrant function of these molecules is associated with a large number of autoimmune diseases such as diabetes type I and chronic inflammatory diseases. The MHC class II is assembled from DQ alpha 1 and DQ beta 1 which come together as a heterodimer through GXXXG-mediated protein–protein interactions and a highly specific protein-sphingomyelin-C18 interaction motif located on DQA1. This association can have important consequences in regulating the function of these membrane proteins. Here, we investigated the structure and topology of the DQA1 and DQB1 transmembrane helical domains by CD-, oriented 2H and 15N solid-state NMR spectroscopies. The spectra at peptide-to-lipid ratios of 0.5 to 2 mol% are indicative of a topological equilibrium involving a helix crossing the membrane with a tilt angle of about 20° and another transmembrane topology with around 30° tilt. The latter is probably representing a dimer. Furthermore, at the lowest peptide-to-lipid ratio, a third polypeptide population becomes obvious. Interestingly, the DQB1 and to a lesser extent the DQA1 transmembrane helical domains exhibit a strong fatty acyl chain disordering effect on the inner segments of the 2H-labelled palmitoyl chain of POPC bilayers. This phosphatidylcholine disordering requires the presence of sphingomyelin-C18 suggesting that the ensemble of transmembrane polypeptide and sphingolipid exerts positive curvature strain.

  • Structure, Topology, and Dynamics of Membrane-Inserted Polypeptides and Lipids by Solid-State NMR Spectroscopy: Investigations of the Transmembrane Domains of the DQ Beta-1 Subunit of the MHC II Receptor and of the COP I Protein p24

    Evgeniy Salnikov, Christopher Aisenbrey, Bianca Pokrandt, Britta Brügger, Burkhard Bechinger
    Frontiers in Molecular Biosciences, 2019, 6, pp.83. ⟨10.3389/fmolb.2019.00083⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    MHC class II receptors carry important function in adaptive immunity and their malfunctioning is associated with diabetes type I, chronic inflammatory diseases and other autoimmune diseases. The protein assembles from the DQ alpha-1 and DQ beta-1 subunits where the transmembrane domains of these type I membrane proteins have been shown to be involved in homo- and heterodimer formation. Furthermore, the DQ alpha 1 chain carries a sequence motif that has been first identified in the context of p24, a protein involved in the formation of COPI vesicles of the intracellular transport machinery, to specifically interact with sphingomyelin-C18 (SM-C18). Here we investigated the membrane interactions and dynamics of DQ beta-1 in liquid crystalline POPC phospholipid bilayers by oriented 15N solid-state NMR spectroscopy. The 15N resonances are indicative of a helical tilt angle of the membrane anchor sequence around 20°. Two populations can be distinguished by their differential dynamics probably corresponding the DQ beta-1 mono- and homodimer. Whereas, this equilibrium is hardly affected by the addition of 5 mole% SM-C18 a single population is visible in DMPC lipid bilayers suggesting that the lipid saturation is an important parameter. Furthermore, the DQ alpha-1, DQ beta-1 and p24 transmembrane helical domains were reconstituted into POPC or POPC/SM-C18 lipid bilayers where the fatty acyl chain of either the phosphatidylcholine or of the sphingolipid have been deuterated. Interestingly in the presence of both sphingolipid and polypeptide a strong decrease in the innermost membrane order of the POPC palmitoyl chain is observed, an effect that is strongest for DQ beta-1. In contrast, for the first time the polypeptide interactions were monitored by deuteration of the stearoyl chain of SM-C18. The resulting 2H solid-state NMR spectra show an increase in order for p24 and DQ alpha-1 which both carry the SM recognition motif. Thereby the data are suggestive that SM-C18 together with the transmembrane domains form structures imposing positive curvature strain on the surrounding POPC lipids. This effect is attenuated when SM-C18 is recognized by the protein

  • Synthesis of new Mn19 analogues and their structural, electrochemical and catalytic properties

    Elodie Chevallot-Beroux, Ayuk M. Ako, Wolfgang Schmitt, Brendan Twamley, Joseph Moran, Corinne Boudon, Laurent Ruhlmann, Samir Mameri
    Dalton Transactions, 2019, 48 (15), pp.4830-4836. ⟨10.1039/C8DT04807J⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    We report the synthesis and structural characterisation of new Mn19 and Mn18M analogues, [MnIII12MnII7(μ4-O)8(μ3-OCH3)2(μ3-Br)6(HLMe)12(MeOH)6]Br2 (2) and [MnIII12MnII6Sr(μ4-O8(μ3-Cl)8(HLMe)12(MeCN)6]Cl2 cluster (3), where H3LMe is 2,6-bis(hydroxymethyl)-p-cresol. The electrochemistry of 2 and 3 has been investigated and their activity as catalysts in the oxidation of benzyl alcohol has been evaluated. Selective oxidation of benzyl alcohol to benzaldehyde by O2 was achieved using 1 mol% of catalyst with conversions of 74% (2) and 60% (3) at 140 °C using TEMPO as a co-catalyst. No partial conversion of benzaldehyde to benzoic acid was observed. The results obtained revealed that different operative parameters – such as catalyst loading, temperature, time, solvent and the presence of molecular oxygen – played an important role in the selective oxidation of benzyl alcohol.

  • Selective recognition of acetylcholine over choline by a fluorescent cage

    Augustin Long, Nicolas Fantozzi, Sandra Pinet, Emilie Genin, Rémi Pétuya, Didier Bégué, Vincent Robert, Jean-Pierre Dutasta, Isabelle Gosse, Alexandre Martinez
    Organic & Biomolecular Chemistry, 2019, 17 (21), pp.5253-5257. ⟨10.1039/c9ob00931k⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    A fluorescent hemicryptophane has been synthesized and can beused as a turn on receptor of acetylcholine. A binding constant of2.4 × 104M−1was measured for this neurotransmitter, and itsselective and sensitive detection over choline and choline phos-phate was achieved. NMR and DFT calculations provide insight intothe interactions involved in this selective recognition process

  • Bi-stable spin-crossover characteristics of a highly distorted [Fe(1-BPP-COOC2H5)(2)](ClO4)(2)center dot CH3CN complex

    Senthil Kumar Kuppusamy, Benoit Heinrich, Sergio Vela Llausi, Eufemio Moreno-Pineda, Corinne Bailly, Mario Ruben
    Dalton Transactions, 2019, 48 (12), pp.3825-3830. ⟨10.1039/c8dt04928a⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    A highly distorted high spin Fe(ii)-complex, [Fe(1-BPP-COOC2H5)(2)](ClO4)(2)CH3CN, with a trans-N(pyridine)-Fe-N(pyridine) angle (phi) of 158.83(17)degrees showed lattice solvent dependent bi-stable spin-state switching characteristics with T-1/2 = ca. 233 K and a high thermal hysteresis width (T) of 101 K, for the first cooling and heating cycle, unprecedented for the [Fe(BPP)(2)](2+) series of complexes; the results presented in this study are fundamentally important and have implications towards the realization of device architectures based on bi-stable SCO complexes.

  • Switching on Endogenous Metal Binding Proteins in Parkinson’s Disease

    Fleur Mcleary, Alexandre Rcom-H’cheo-Gauthier, Michael Goulding, Rowan Radford, Yuho Okita, Peter Faller, Roger Chung, Dean Pountney
    Cells, 2019, 8 (2), pp.179. ⟨10.3390/cells8020179⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    The formation of cytotoxic intracellular protein aggregates is a pathological signature of multiple neurodegenerative diseases. The principle aggregating protein in Parkinson’s disease (PD) and atypical Parkinson’s diseases is α-synuclein (α-syn), which occurs in neural cytoplasmic inclusions. Several factors have been found to trigger α-syn aggregation, including raised calcium, iron, and copper. Transcriptional inducers have been explored to upregulate expression of endogenous metal-binding proteins as a potential neuroprotective strategy. The vitamin-D analogue, calcipotriol, induced increased expression of the neuronal vitamin D-dependent calcium-binding protein, calbindin-D28k, and this significantly decreased the occurrence of α-syn aggregates in cells with transiently raised intracellular free Ca, thereby increasing viability. More recently, the induction of endogenous expression of the Zn and Cu binding protein, metallothionein, by the glucocorticoid analogue, dexamethasone, gave a specific reduction in Cu-dependent α-syn aggregates. Fe accumulation has long been associated with PD. Intracellularly, Fe is regulated by interactions between the Fe storage protein ferritin and Fe transporters, such as poly(C)-binding protein 1. Analysis of the transcriptional regulation of Fe binding proteins may reveal potential inducers that could modulate Fe homoeostasis in disease. The current review highlights recent studies that suggest that transcriptional inducers may have potential as novel mechanism-based drugs against metal overload in PD.

  • Cyclic(Alkyl)(Amino)Carbene (CAAC)‐Supported Zn Alkyls: Synthesis, Structure and Reactivity in Hydrosilylation Catalysis

    Jean‐charles Bruyere, David Specklin, Christophe Gourlaouen, Rosita Lapenta, Luis Veiros, Alfonso Grassi, Stefano Milione, Laurent Ruhlmann, Corinne Boudon, Samuel Dagorne
    Chemistry - A European Journal, 2019, 25 (34), pp.8061-8069. ⟨10.1002/chem.201900961⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    The reactivity of ZnII dialkyl species ZnMe2 with a cyclic(alkyl)(amino)carbene, 1-[2,6-bis(1-methylethyl)phenyl]-3,3,5,5-tetramethyl-2-pyrrolidinylidene (CAAC, 1), was studied and extended to the preparation of robust CAAC-supported ZnII Lewis acidic organocations. CAAC adduct of ZnMe2 (2), formed from a 1:1 mixture of 1 and ZnMe2, is unstable at room temperature and readily undergoes a CAAC carbene insertion into the Zn−Me bond to produce the ZnX2-type species (CAAC-Me)ZnMe (3), a reactivity further supported by DFT calculations. Despite its limited stability, adduct 2 was cleanly ionized to robust two-coordinate (CAAC)ZnMe+ cation (5+) and derived into (CAAC)ZnC6F5+ (7+), both isolated as B(C6F5)4− salts, showing the ability of CAAC for the stabilization of reactive [ZnMe]+ and [ZnC6F5]+ moieties. Due to the lability of the CAAC−ZnMe2 bond, the formation of bis(CAAC) adduct (CAAC)2ZnMe+ cation (6+) was also observed and the corresponding salt [6][B(C6F5)4] was structurally characterized. As estimated from experimental and calculations data, cations 5+ and 7+ are highly Lewis acidic species and the stronger Lewis acid 7+ effectively mediates alkene, alkyne and CO2 hydrosilylation catalysis. All supporting data hints at Lewis acid type activation–functionalization processes. Despite a lower energy LUMO in 5+ and 7+, their observed reactivity is comparable to those of N-heterocyclic carbene (NHC) analogues, in line with charge-controlled reactions for carbene-stabilized ZnII organocations.

  • Development of New High-Performance Visible Light Photoinitiators Based on Carbazole Scaffold and Their Applications in 3D Printing and Photocomposite Synthesis

    Mira Abdallah, Diego Magaldi, Akram Hijazi, Bernadette Graff, Frederic Dumur, Jean-Pierre Fouassier, Thanh-Tuan Bui, Fabrice Goubard, Jacques Lalevee
    Journal of Polymer Science Part a-Polymer Chemistry, 2019, 57 (20), pp.2081--2092. ⟨10.1002/pola.29471⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    In this article, new compounds based on the carbazole scaffold (DMs = DM1 and DM2, constituted by a carbazole unit connected on positions 3 and 6 to a two 4,4 '-dimethoxydiphenylamine groups and differing by the substituent present on the nitrogen heteroatom of the carbazole core) were synthesized and proposed as high-performance visible light photoinitiators/photosensitizers for both the free-radical polymerization of methacrylates and the cationic polymerization of epoxides upon visible light exposure using LED@405 nm. Remarkably, DM2 leads to higher final conversions than DM1. In order to study the photophysical and photochemical properties of the carbazole derivatives, different parameters were taken into account such as the light absorption, the steady-state photolysis, and the fluorescence spectroscopy. Using different techniques such as fluorescence quenching, redox behavior, and cyclic voltammetry, we are able to discuss the photosensitization/photoinitiation reactions providing a full coherent picture of the involved chemical mechanisms. The photosensitization of the carbazole derivatives occurred predominantly via singlet excited states at the rate of the diffusion limit. Upon exposure to laser diode at 405 nm, DMs show high performance in initiating systems for 3D resins. Remarkably, DM2 can also be used in photocomposite synthesis using light-emitting diode conveyor. (c) 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2019

  • Synthesis and structural characterization of benzyl-functionalized N-heterocyclic carbene platinum complexes: Dramatic substituent effect on anti-cancer activity

    Georges Dahm, Mathilde Bouché, Corinne Bailly, Lydia Karmazin, Stéphane Bellemin-Laponnaz
    Journal of Organometallic Chemistry, 2019, 899, pp.120908. ⟨10.1016/j.jorganchem.2019.120908⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    A series of platinum (II) complexes bearing N-heterocyclic carbene NHC ligands functionalized by various benzyl moieties were synthesized and characterized. The molecular structure of two complexes has been confirmed by X-ray diffraction studies on single crystals. Investigation of in vitro cytotoxic activities against various cancer cell lines revealed a strong substituent effect: IC50 as low as 0.005 μM were obtained depending on the substituent on the benzyl moiety.

  • An Investigation into the Stephens-Castro Synthesis of Dehydrotriaryl[12]annulenes: Factors Influencing the Cyclotrimerization

    Paul Baxter, Abdelaziz Al Ouahabi, Lydia Karmazin, Alexandre Varnek, Jean-Marc Strub, Sarah Cianférani
    European Journal of Organic Chemistry, 2019, 2019 (40), pp.6783-6795. ⟨10.1002/ejoc.201901053⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Detailed investigation into the CuX/base/phosphine modified Stephens-Castro syntheses of dehydrotriaryl[12]annulenes 1-3 have shown that cyclization is suppressed by excess CuX, strong donor ligands, high dilution conditions, and thermally unstable ethynylcuprate monomers. Surprisingly, intermediate dimer 16 plays only a minor role in the formation of 2 and 4. Overall, our findings are consistent with a cyclization pathway governed more by the nature of prior self-association of the ethynylcuprate monomers. Crystallographic characterization of tetrameric by-product 4, is also reported and revealed that it assembles into tubular stacks in the solid state.

  • Synthesis of the First Resorcin[4]arene---functionalized Triazolium Salts and Their Use in Suzuki-Miyaura Cross---Coupling Reactions

    David Semeril, Dominique Matt, Rengan Ramesh
    Catalysts, 2019, 9 (4), pp.388. ⟨10.3390/catal9040388⟩ | Publiée le 1 janvier 2019
    Article dans une revue

    Two bulky triazolium salts, namely 1-{4(24),6(10),12(16),18(22)-tetramethylenedioxy-2,8,14,20-tetrapentylresorcin[4]arene-5-yl}-4-phenyl-3-methyl-1H-1,2,3-triazolium tetrafluoro borate (1) and 1,4-bis{4(24),6(10),12(16),18(22)-tetramethylenedioxy-2,8,14,20-tetrapentyl resorcin[4]arene-5-yl}-3-methyl-1H-1,2,3-triazolium iodide (2), have been synthesized and assessed in the palladium-catalyzed Suzuki-Miyaura cross-coupling of aryl chlorides, with aryl boronic acids. As a general trend, the reaction rates obtained with 1 were significantly higher (up to 5 times) than those observed for 2, this mainly reflected a sterically more accessible metal center in the catalytic intermediates formed with 1. The presence of flexible pentyl chains in these intermediates, which might sterically interact with the metal center, when the latter adopts an exo-orientation with respect to the cavity, were likely responsible for the observed good performance.

  • Synthesis and Kinetic evaluation of an azido analogue of methylerythritol phosphate: a Novel Inhibitor of E. coli YgbP/IspD

    Zoljargal Baatarkhuu, Philippe Chaignon, Franck Borel, Jean-Luc Ferrer, Alain Wagner, Myriam Seemann
    Scientific Reports, 2018, 8 (1), pp.17892. ⟨10.1038/s41598-018-35586-y⟩ | Publiée le 17 décembre 2018
    Article dans une revue

    As multidrug resistant pathogenic microorganisms are on the horizon, it is crucial to develop continuously novel medicines in order to overcome the emerging resistance. The methylerythritol phosphate pathway (MEP) is an ideal target for antimicrobial development as it is absent in humans but present in most bacteria and in the parasite Plasmodium falciparum. Here, we report the synthesis and the kinetic parameters of a novel potent inhibitor (MEPN3) of Escherichia coli YgbP/IspD, the third enzyme of the MEP pathway. MEPN3 inhibits E. coli YgbP/IspD in mixed type mode regarding both substrates. Interestingly, MEPN3 shows the highest inhibitory activity when compared to known inhibitors of E. coli YgbP/IspD. The mechanism of this enzyme was also studied by steady state kinetic analysis and was found to be sequential where substrates add to the enzyme in sequential manner.

  • Conjugated hybrid films based on a new polyoxotitanate monomer

    Gang Liu, Xing Yang, Antoine Bonnefont, Yaokang Lv, Jun Chen, Wenyan Dan, Zuofeng Chen, Laurent Ruhlmann, Dominic S. Wright, Cheng Zhang
    Chemical Communications, 2018, 54 (100), pp.14132-14135. ⟨10.1039/C8CC07527A⟩ | Publiée le 13 décembre 2018
    Article dans une revue

    Novel polyoxotitanate (POT) hexamer [Ti(μ3-O)(OiPr)(TA)]6 (TA= thiophene-3-acetic acid) has been employed as a nano-building block, producing a series of novel hybrid conjugated films Poly-(EDOT-POT)s by electrochemical copolymerization with 3,4-ethylenedioxythiophene (EDOT). One of these polymers Poly-(EDOT-POT)-1 can be used as fast-ion electrode material and has improved electrochromic properties and 35% higher capacitance (102.5 F/g) than that of bare PEDOT (75.8 F/g) at a current density of 1 A/g.

  • Positive Allosteric Control of Guests Encapsulation by Metal Binding to Covalent Porphyrin Cages

    Ryan Djemili, Lucas Kocher, Stephanie Durot, Anssi Peuroren, Kari Rissanen, Valérie Heitz
    Chemistry - A European Journal, 2018, ⟨10.1002/chem.201805498⟩ | Publiée le 10 décembre 2018
    Article dans une revue

    The allosteric control of the receptor properties of two flexible covalent cages is reported. These receptors consist of two zinc(II) porphyrins connected by four linkers of two different sizes, each incorporating two 1,2,3-triazolyl ligands. Silver(I) ions act as effectors, responsible for an on/off encapsulation mechanism of neutral guest molecules. Binding silver(I) ions to the triazoles opens the cages and triggers the coordination of pyrazine or the encapsulation of N,N’-dibutyl- 1,4,5,8-naphthalene diimide. The X-ray structure of the silver(I)-complexed receptor with short connectors is reported, revealing the hollow structure with a cavity well-defined by two eclipsed porphyrins. Rather unexpectedly, the crystallographic structure of this receptor with pyrazine as a guest molecule showed that the cavity is occupied by two pyrazines, each binding to the zinc(II) porphyrin in a monotopic fashion.

  • Multiple impurities and combined local density approximations in site-occupation embedding theory

    Bruno Senjean, Naoki Nakatani, Masahisa Tsuchiizu, Emmanuel Fromager
    Theoretical Chemistry Accounts: Theory, Computation, and Modeling, 2018, 137 (12), ⟨10.1007/s00214-018-2368-z⟩ | Publiée le 1 décembre 2018
    Article dans une revue

    Site-occupation embedding theory (SOET) is an in-principle-exact multi-determinantal extension of density-functional theory for model Hamiltonians. Various extensions of recent developments in SOET [Senjean et al., Phys. Rev. B 97, 235105 (2018)] are explored in this work. An important step forward is the generalization of the theory to multiple impurity sites. We also propose a new single-impurity density-functional approximation (DFA) where the density-functional impurity correlation energy of the two-level (2L) Hubbard system is combined with the Bethe ansatz local density approximation (BALDA) to the full correlation energy of the (infinite) Hubbard model. In order to test the new DFAs, the impurity-interacting wavefunction has been computed self-consistently with the density matrix renormalization group method (DMRG). Double occupation and per-site energy expressions have been derived and implemented in the one-dimensional case. A detailed analysis of the results is presented, with a particular focus on the errors induced either by the energy functionals solely or by the self-consistently converged densities. Among all the DFAs (including those previously proposed), the combined 2L-BALDA is the one that performs the best in all correlation and density regimes. Finally, extensions in new directions, like a partition-DFT-type reformulation of SOET, a projection-based SOET approach, or the combination of SOET with Green functions, are briefly discussed as a perspective.

  • Vinyl nosylates as partner in copper and silver co-catalyzed Sonogashira cross-coupling reactions

    Nicolas Cheval, Barbara Hoffmann, Anna Dikova, Fatih Sirindil, Philippe Bertus, Aurélien Blanc, Jean-Marc Weibel, Patrick Pale
    Tetrahedron, 2018, 74 (50), pp.7111-7119. ⟨10.1016/j.tet.2018.10.017⟩ | Publiée le 1 décembre 2018
    Article dans une revue

    Vinyl nosylates, readily obtained from β-dicarbonyl derivatives, could be efficiently engaged in Sonogashira cross-coupling reactions, either cocatalyzed by copper or silver salts. The para-nitrobenzenesulfonate (nosylate) group allows this coupling to be performed under very mild conditions (room temperature). These new leaving group and mild conditions could be applied to the synthesis of acetylenic coumarinyl derivatives and to the total synthesis of an acetylenic monoterpene natural product, named cleviolide.

  • Electrochemical properties of the [SiW 10 O 36 (M 2 O 2 E 2 )] 6− polyoxometalate series (M = Mo( v ) or W( v ); E = S or O)

    Justin Claude Kemmegne-Mbouguen, Sébastien Floquet, Dejin Zang, Antoine Bonnefont, Laurent Ruhlmann, Corine Simonnet-Jégat, Xavier López, Mohamed Haouas, Emmanuel Cadot
    New Journal of Chemistry, 2018, 43 (3), pp.1146-1155. ⟨10.1039/c8nj04451a⟩ | Publiée le 23 novembre 2018
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    Electronic Supplementary Information (ESI) available: FT-IR spectra of the compounds used in this study (Figure S1); Additional electrochemical data (Figure S2-S6), additional UV-Vis-NIR spectroelectrochemistry experiments (Figure S7-S12); effect of addition of an excess of Br2 on the electronic spectra of {SiW10-Mo2O2S2} in DMF (Figure S13); 29 Si NMR spectra of {SiW10-Mo2O2S2} in DMF/CH3CN mixtures before and after addition of one equivalent of Br2 (Figure S14). See This paper deals with the electrochemical studies performed in DMF on three iso-structural and iso-electronic compounds of general formula γ−[SiW10O36(M2O2E2)] 6-, which differ either by the nature of the metallic centers (M = Mo(V) or W(V)) or by the nature of the bridges between Mo(V) atoms (E = O 2-or S 2-). Interestingly, cyclic voltammetry experiments performed in dry DMF reveal electrochemical processes both in oxidation and in reduction modes. The nature of these processes are studied and elucidated by various electrochemical techniques such as coulometry, rotating disk electrodes, spectro-electrochemistry (IR and UV-Vis), NMR and DFT calculations.

  • Germylene–sulfoxide as a potential hemilabile ligand: application in coordination chemistry

    Nicolas Lentz, Sonia Mallet-Ladeira, Antoine Baceiredo, Tsuyoshi Kato, David Madec
    Dalton Transactions, 2018, 47 (44), pp.15751-15756. ⟨10.1039/c8dt03669a⟩ | Publiée le 13 novembre 2018
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    We describe here the synthesis of heteroleptic organogermylenes containing a sulfoxide donor function for their application in coordination chemistry. While complexation reaction with [W(cod)(CO)4] and [Mo(nbd)(CO)4] afforded bis(germanium)(II) transition-metal complexes, a bidentate complex coordinated by germanium(II) and the oxygen atom of the sulfinyl group was obtained from [Ru(PPh3)3Cl2].

  • A Porphyrin Dimer–GdDOTA Conjugate as a Theranostic Agent for One- and Two-Photon Photodynamic Therapy and MRI

    Julie Schmitt, Sébastien Jenni, Angélique Sour, Valérie Heitz, Frédéric Bolze, Agnès Pallier, Célia Bonnet, Éva Tóth, Barbara Ventura
    Bioconjugate Chemistry, 2018, 29 (11), pp.3726-3738. ⟨10.1021/acs.bioconjchem.8b00634⟩ | Publiée le 12 novembre 2018
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    A molecular theranostic agent designed for photodynamic therapy (PDT) treatment in the near-infrared and for imaging tissue tumors with magnetic resonance imaging (MRI) is reported. It consists of a linear pi-conjugated Zn(II) porphyrin dimer linked at each extremity to a GdDOTA-type complex. This agent has shown very promising potential for PDT applications with good singlet oxygen generation in DMSO and high linear absorption in the near- infrared (lambda(max) = 746 nm, epsilon approximate to 10(5) M-1 cm(-1)). Moreover, this molecule has a propensity for two-photon excited PDT with high two-photon cross sections (similar to 8000 GM in 880-930 nm range), which should allow for deeper tumor treatments and higher spatial precision as compared to conventional one-photon PDT. Regarding the MRI contrast agent properties, the molecule has shown superior relaxivity (14.4 mM(-1) s(-1) at 40 MHz, 298 K) in comparison to clinical contrast agents and the ability to be internalized in cells, thanks to its amphiphilic character. Irradiation of HeLa cells using either one-photon (740 nm) or two-photon excitation (910 nm) has led in both cases to important cell death.

  • Cu transfer from amyloid-β4-16 to metallothionein-3: the role of the neurotransmitter glutamate and metallothionein-3 Zn(ii)-load states

    Alice Santoro, Nina Ewa Wezynfeld, Ewelina Stefaniak, Adam Pomorski, Dawid Płonka, Artur Krężel, Wojciech Bal, Peter Faller
    Chemical Communications, 2018, 54 (89), ⟨10.1039/c8cc06221h⟩ | Publiée le 6 novembre 2018
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    Copper transfer from Cu(ii)amyloid-β4-16 to human Zn7-metallothionein-3 can be accelerated by glutamate and by lowering the Zn-load of metallothionein-3 with EDTA. Glutamate facilitates the Cu(ii) release, and Zn4-6-metallothionein-3 react more rapidly. These mechanisms are additive, proving the intricate and interconnected network of zinc and copper trafficking between biomolecules.

  • An Ion-Permeable State of the Glycine Receptor Captured by Molecular Dynamics

    Adrien Henri Cerdan, Nicolas Eric Martin, Marco Cecchini
    Structure, 2018, 26 (11), pp.1555-1562.e4. ⟨10.1016/j.str.2018.07.019⟩ | Publiée le 1 novembre 2018
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    Glycine receptors (GlyR) mediate fast inhibitory neurotransmission by switching between discrete states in response to ligand-binding events. Recent high-resolution structures from cryoelectron microscopy (cryo-EM) and X-ray crystallography have provided atomistic models for the open and closed states. Notably, the cryo-EM structure in complex with glycine illuminated a previously unreported wide-open state, whose physiological significance is debated. Here, we present the structure of an ion-conducting state of GlyR α1 captured by molecular dynamics and validate its physiological relevance with computational electrophysiology and polyatomic anion permeation simulations. Our analysis suggests that none of the experimental structures is a true representation of the physiologically active state, although previously characterized open channels in GLIC at pH 4, or GluCl/GlyR with ivermectin bound, provide reasonable models. These results open the door to an original functional annotation and support the conclusion that pore closing by desensitization versus deactivation involves the reorientation of the pore-lining helices in opposite directions.

  • Metal Binding to Aβ Peptides Inhibits Interaction with Cytochrome c : Insights from Abiological Constructs

    Ankita Sarkar, Kushal Sengupta, Sudipta Chatterjee, Manas Seal, Peter Faller, Somdatta Ghosh Dey, Abhishek Dey
    ACS Omega, 2018, 3 (10), pp.13994-14003. ⟨10.1021/acsomega.8b01736⟩ | Publiée le 31 octobre 2018
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    Aβ(1–40) peptide is mutated to introduce cysteine residue to allow formation of organized self-assembled monolayers (SAMs) on Au electrodes. Three mutants of this peptide are produced, which vary in the position of the inserted cysteine residue. Fourier transform infrared data on these peptide SAMs show the presence of both α helices and β sheet in these Aβ constructs. These peptide constructs interact with cytochrome c (Cytc), allowing electron transfer between Cytc and the electrode via the Aβ peptides. Binding of metals like Zn2+ or Cu2+ induces changes in the morphologies of these assemblies, making them fold, which inhibits their spontaneous interaction with Cytc.

  • De Novo Molecular Design by Combining Deep Autoencoder Recurrent Neural Networks with Generative Topographic Mapping

    Boris Sattarov, Igor Baskin, Dragos Horvath, Gilles Marcou, Esben Jannik Bjerrum, Alexandre Varnek
    Journal of Chemical Information and Modeling, 2018, 59 (3), pp.1182-1196. ⟨10.1021/acs.jcim.8b00751⟩ | Publiée le 23 octobre 2018
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    Here we show that Generative Topographic Mapping (GTM) can be used to explore the latent space of the SMILES-based autoencoders and generate focused molecular libraries of interest. We have built a sequence-to-sequence neural network with Bidirectional Long Short-Term Memory layers and trained it on the SMILES strings from ChEMBL23. Very high reconstruction rates of the test set molecules were achieved (>98%), which are comparable to the ones reported in related publications. Using GTM, we have visualized the autoencoder latent space on the two-dimensional topographic map. Targeted map zones can be used for generating novel molecular structures by sampling associated latent space points and decoding them to SMILES. The sampling method based on a genetic algorithm was introduced to optimize compound properties "on the fly". The generated focused molecular libraries were shown to contain original and a priori feasible compounds which, pending actual synthesis and testing, showed encouraging behavior in independent structure-based affinity estimation procedures (pharmacophore matching, docking).

  • Recent Developments on N-Heterocyclic Carbene Supported Zinc Complexes: Synthesis and Use in Catalysis

    Samuel Dagorne
    SYNTHESIS, 2018, 50 (18), pp.3662-3670. ⟨10.1055/s-0037-1610088⟩ | Publiée le 28 septembre 2018
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    The present contribution reviews the synthesis, reactivity, and use in catalysis of NHC–Zn complexes reported since 2013. NHC-stabilized Zn(II) species typically display enhanced stability relative to common organozinc species (such as Zn dialkyls), a feature of interest for the mediation of various chemical processes and the stabilization of reactive Zn-based species. Their use in catalysis is essentially dominated by reduction reactions of various unsaturated small molecules (including CO2), thus primarily involving Zn–H and Zn–alkyl derivatives as catalysts. Simple NHC adducts of Zn(II) dihalides also appear as effective catalysts for the reduction amination of CO2 and borylation of alkyl/aryl halides. Stable and well-defined Zn alkoxides have also been prepared and behave as effective catalysts in the polymerization of cyclic esters/carbonates for the production of well-defined biodegradable materials. Overall, the attractive features of NHC-based Zn(II) species include ready access, a reasonable stability/reactivity balance, and steric/electronic tunability (through the NHC source), which should promote their further development.

  • Impulsivity and consideration of future consequences as moderators of the association between emotional eating and body weight status

    Marc Bénard, France Bellisle, Fabrice Etilé, Gérard Reach, Emmanuelle Kesse-Guyot, Serge Hercberg, Sandrine Peneau
    International Journal of Behavioral Nutrition and Physical Activity, 2018, 15 (1), ⟨10.1186/s12966-018-0721-1⟩ | Publiée le 6 septembre 2018
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    <strong>Background</strong>: Emotional eating (EmE) is characterized by an over consumption of food in response to negative emotions and is associated with an increased weight status. Consideration of Future Consequences (CFC) or a low level of impulsivity could influence the association between EmE and weight status. The objective was to analyze the moderating influence of CFC and impulsivity on the relationship between EmE and BMI. <strong>Methods</strong>: A total of 9974 men and 39,797 women from the NutriNet-Sante cohort study completed the revised 21-item Three-Factor Eating Questionnaire to assess their EmE, the CFC questionnaire (CFC-12) to assess their level of time perspective, and the Barratt Impulsiveness Scale (BIS-11) to assess their impulsivity. Weight and height were self-reported each year over a median follow-up of 5.3 years. The associations between EmE and repeated measures of BMI were estimated by multiple linear mixed-effects regression models stratified by gender, tertiles of the CFC, or tertiles of the BIS-11, taking into account sociodemographic and lifestyle factors. <strong>Results</strong>: Overall, EmE was positively associated with BMI. CFC and impulsivity did not moderate the effect of EmE on changes of BMI per year, but quantitatively moderated the effect of EmE on overall BMI. In women, the strength of the association between EmE and weight status increased with CFC level. Difference of BMI slopes between a low and a high level of CFC was - 0.43 kg/m(2) (95% CI: -0.55, - 0.30) (p < .0001). In addition, the strength of the association between emotional eating and weight status increased with impulsivity level. Difference of BMI slopes between a low and a high level of impulsivity was + 0.37 kg/m(2) (95% CI: 0.24, 0.51) (p < .0001). In men, only individuals with a low CFC presented a stronger association of EmE with BMI. <strong>Conclusions</strong>: Impulsivity and consideration of future consequences moderated the association between emotional eating and body weight status. This study emphasizes the importance of taking into account psychological traits in obesity prevention.

  • Light-actuated resorcin[4]arene cavitands

    Víctor García-López, Jovana V. Milić, Michal Zalibera, Dmytro Neshchadin, Martin Kuss-Petermann, Laurent Ruhlmann, Julia Nomrowski, Nils Trapp, Corinne Boudon, Georg Gescheidt, Oliver S. Wenger, François Diederich
    Tetrahedron, 2018, 74 (39), pp.5615-5626. ⟨10.1016/j.tet.2018.08.002⟩ | Publiée le 1 septembre 2018
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    A light-actuated resorcin[4]arene cavitand equipped with two quinone (Q) and two opposite Ru(II)-based photoredox-active walls was synthesized and investigated. The cavitand is capable of switching from an open to a contracted conformation upon reduction of the Q to the SQ radical dianion state by intramolecular photoinduced electron transfer. The molecular switch was investigated by cyclic and rotating disc voltammetry, UV-Vis-NIR spectroelectrochemistry, transient absorption, and EPR spectroscopy. This study provides the basis for the development of future photoredox switches and molecular actuating nanodevices.

  • Rescoring of docking poses under Occam’s Razor: are there simpler solutions?

    Michael Zhenin, Malkeet Singh Bahia, Gilles Marcou, Alexandre Varnek, Hanoch Senderowitz, Dragos Horvath
    Journal of Computer-Aided Molecular Design, 2018, 32 (9), pp.877-888. ⟨10.1007/s10822-018-0155-5⟩ | Publiée le 1 septembre 2018
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    Ligand affinity prediction from docking simulations is usually performed by means of highly empirical and diverse protocols. These protocols often involve the re-scoring of poses generated by a Force Field (FF) based Hamiltonian to provide either estimated binding affinities-or alternatively, some empirical goodness score. Re-scoring is performed by so-called scoring functions-typically, a reweighted sum of FF terms augmented by additional terms (e.g., desolvation/entropic penalty, hydrophobicity, aromatic interactions etc.). Sometimes, the scoring function actually drives ligand positioning, but often it only operates on the best scoring poses ranked top by the initial ligand positioning tool. In either of these rather intricate scenarios, scoring functions are docking-specific models, and most require machine-learning-based calibration. Therefore, docking simulations are less straightforward when compared to "standard" molecular simulations in which the FF Hamiltonian defines the energy, and affinity emerges as an ensemble average property over pools of representative conformers (i.e. the trajectory). According to Occam's Razor principle, additional model complexity is only acceptable if demonstrated to bring a significant improvement of prediction quality. In this work we therefore examined whether the complexity inherent to scoring functions is indeed justified. For this purpose we compared S4MPLE (Sampler for Multiple Protein-Ligand Entities), a general purpose conformation sampler based on the AMBER/GAFF FF, complemented with continuum solvation terms with several state of the art docking tools that rely on calibrated scoring functions (Glide, Gold, Autodock-Vina) in terms of its ability to top-rank the actives from large and diverse ligand series associated with various proteins. There is no clear winner of this study, where each program performed well on most of the targets, but also failed with respect to at least one of them. Therefore, a well-parameterized force field with a simple, energy-based ligand ranking protocol appears to be as effective docking protocol as intricate rescoring strategies Powered by Editorial Manager® and ProduXion Manager® from Aries Systems Corporation

  • Aryl-Alkyl-Lysines Interact with Anionic Lipid Components of Bacterial Cell Envelope Eliciting Anti-Inflammatory and Antibiofilm Properties

    Chandradhish Ghosh, Nicole Harmouche, Burkhard Bechinger, Jayanta Haldar
    ACS Omega, 2018, 3 (8), pp.9182-9190. ⟨10.1021/acsomega.8b01052⟩ | Publiée le 31 août 2018
    Article dans une revue

    The emergence of bacterial resistance and hesitance in approving new drugs has bolstered research on membrane-active agents such as antimicrobial peptides and their synthetic derivatives as therapeutic alternatives against bacterial infections. Herein, we document the action of aryl-alkyl-lysines on liposomes mimicking bacterial membranes using solid-state nuclear magnetic resonance spectroscopy. A significant perturbation of the lipid thickness and order parameter of the lipid membrane was observed upon treatment with this class of compounds. Encouraged by these results, the ability of the most active compound (NCK-10) to interact with aggregates of lipopolysaccharides (LPSs) was studied. In vitro experiments showed that NCK-10 was able to prevent the LPS-induced stimulation of proinflammatory cytokines such as tumor necrosis factor-α and interleukin-6. The compound could also disrupt the biofilms of Pseudomonas aeruginosa in vitro and bring down the bacterial burden by more than 99% in a mice model of burn infections caused by the biofilms of P. aeruginosa.

  • Endohedral Functionalized Cage as a Tool to Create Frustrated Lewis Pairs

    Jian Yang, Bastien Chatelet, Véronique Dufaud, Damien Herault, Sabine Michaud-Chevallier, Vincent Robert, Jean-Pierre Dutasta, Alexandre Martinez
    Angewandte Chemie International Edition, 2018, 57 (43), pp.4212-14215. ⟨10.1002/anie.201808291⟩ | Publiée le 29 août 2018
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    A frustrated Lewis pair (FLP) system was obtained by confinement of the Lewis base partner, a Verkades super-base, in a molecular cavity. Whereas the model superbase lacking cavity displayed no catalytic activity in Morita-Baylis-Hillman (MBH) reactions, when associated to titanium (IV) chloride, the encaged superbase turns out to be an efficient catalyst under the same conditions. The crucial role of the endohedral functionalized cage on catalytic performance was further demonstrated by the fact that model superbases with bulky substituents were much less efficient to produce active catalysts, as well as by inhibition and substrate selection experiments. 31 P NMR spectroscopy and mass spectrometry experiments evidenced that no interaction between the Lewis acidic and basic partners occurred when the superbase was capped by a cycloveratrylene (CTV) unit, thus creating a true FLP active system.

  • Unified formulation of fundamental and optical gap problems in density-functional theory for ensembles

    Bruno Senjean, Emmanuel Fromager
    Physical Review A, 2018, 98 (2), ⟨10.1103/PhysRevA.98.022513⟩ | Publiée le 1 août 2018
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    Solving the fundamental and optical gap problems, which yield information about charged and neutral excitations in electronic systems, is one of the biggest challenge in density-functional theory (DFT). Despite their intrinsic difference, we show that the two problems can be made formally identical by introducing a universal and canonical ensemble weight dependent exchange-correlation (xc) density functional. The weight dependence of the xc energy turns out to be the key ingredient for describing the infamous derivative discontinuity and represents a new path for its approximation.

  • Birch bark tar and jewellery: the case study of a necklace from the Iron Age (Eckwersheim, NE France)

    Blandine Courel, Philippe Schaeffer, Clément Féliu, Yohann Thomas, Pierre Adam
    Journal of Archaeological Science: Reports, 2018, 20, pp.72-79. ⟨10.1016/j.jasrep.2018.04.016⟩ | Publiée le 1 août 2018
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    Organic residue analysis has been undertaken on an organic material found on a necklace with a pendant unearthed from a necropolis dated to the Early Iron Age (800-475 BC) and located in Eckwersheim (NE France). The molecular composition of the substance, which was investigated using gas chromatography coupled to mass spectrometry, points towards an adhesive used to stick two bronze half-spheres to form a pendant. The predominance of triterpenoids from the lupane series led to the identification of the adhesive as a birch bark tar and constitutes a rare example of the use of such a material in jewellery in the past

  • Auto-assemblages linéaires de porphyrines et chimie de coordination

    Jennifer A. Wytko, Romain Ruppert, Christophe Jeandon, Jean Weiss
    L'Actualité Chimique, 2018 | Publiée le 20 juillet 2018
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    Les macrocycles tétrapyrroliques, les porphyrines ou leurs dérivés jouent un rôle important dans la nature, notamment dans les processus de collecte et de transfert de l’énergie lumineuse dans les bactéries et les plantes. Inspirés par les structures des antennes photosynthétiques naturelles, les chimistes ont utilisé la chimie de coordination pour assembler des porphyrines de façon bien définie pour générer des propriétés particulières. Cet article décrit la conception et la synthèse d’assemblages linéaires de porphyrines à l’aide de liaisons de coordination. Des études de transferts d’électrons ou d’énergie dans certains systèmes ainsi que quelques exemples de visualisation par des techniques de microscopie sont présentées.

  • Mutations of histidine 13 to arginine but also of arginine 5 to glycine are responsible for the different coordination sites of Zn(II) to human and murine peptides

    Bruno Alies, Valentina Borghesani, Sabrina Noël, Stephanie Sayen, Emmanuel Guillon, Denis Testemale, Peter Faller, Christelle Hureau
    Chemistry - A European Journal, 2018, 24 (53), pp.14233-14241. ⟨10.1002/chem.201802759⟩ | Publiée le 6 juillet 2018
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    Because mice and rats do not naturally develop Alzheimer's disease, genetically modified animals are required to study this pathology. This striking difference in terms of disease onset could be due to three alterations in the murine sequence (R5G, Y10F and H13R) of the amyloid‐β peptide with respect to the human counterpart. Whether the metal‐ion binding properties of the murine peptide are at the origin of such different amyloidogenicity of the two peptides is still an open question. Herein, the main zinc binding site to the murine amyloid‐β at physiological pH has been determined through the combination of several spectroscopic and analytical methods applied to a series of six peptides with one or two of the key mutations. These results have been compared with the zinc binding site encountered in the human peptide. A coordination mechanism that demonstrates the importance of the H13R and R5G mutations in the different zinc environments present in the murine and human peptides is proposed. The nature of the minor zinc species present at physiological pH is also suggested for both peptides. Finally, the biological relevance and fallouts of the differences determined in zinc binding to human versus murine amyloid‐β are also discussed.

  • A Linear Interaction Energy Model for Cavitand Host–Guest Binding Affinities

    Joel Jose Montalvo Acosta, Paulina Pacak, Diego Enry Barreto Gomes, Marco Cecchini
    Journal of Physical Chemistry B, 2018, 122 (26), pp.6810-6814. ⟨10.1021/acs.jpcb.8b03245⟩ | Publiée le 5 juillet 2018
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    Host−guest systems provide excellent models to explore molecular recognition in solution along with relevant technological applications from drug carriers to chemosensors. Here, we present a linear interaction energy (LIE) model to predict the binding affinity in host−guests with remarkable efficiency and predictive power. Using four host families, including cucurbiturils, octa acids, and β-cyclodextrin, and a large set (49) of chemically diverse guests, we demonstrate that binding-affinity predictions with a root mean square error <1.5 kcal/mol from experiments can be obtained with a few nanoseconds of molecular dynamics. The parameters of the LIE model are shown to be transferable among host−guest families, and the quality of the predictions is essentially force-field independent. Inclusion of the strain energy of the host in the bound state appears to be critically important to improve the quality of the predictions, particularly when the host and the guest have comparable sizes. Unsuccesful predictions for 28 additional highly charged and bulky guests to cucurbit[7]uril indicate future directions for improvement.

  • Perturbing the spin crossover transition activation energies in Fe(H 2 B(pz) 2 ) 2 (bipy) with zwitterionic additions

    Paulo Costa, Guanhua Hao, Alpha T. N’diaye, Lucie Routaboul, Pierre Braunstein, Xin Zhang, Jian Zhang, Bernard Doudin, Axel Enders, Peter Dowben
    Journal of Physics: Condensed Matter, 2018, 30 (30), pp.305503. ⟨10.1088/1361-648x/aacd7e⟩ | Publiée le 5 juillet 2018
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    A thermal component to the soft x-ray induced spin crossover transition exists in the switching of a spin crossover compound (complex [Fe{H2B(pz)2}2(bipy)] (pz = pyrazol-1-yl, bipy = 2,2′-bipyridine) combined with the dipolar molecular additives (zwitterionic p-benzoquinonemonoimine C6H2()2()2). The addition of the zwitterionic molecule locks the Fe(II) complex in a largely low spin state configuration over an unusually broad temperature range that includes temperatures well above the thermal spin crossover temperature of 160 K. It is demonstrated here that the process of exciting the [Fe{H2B(pz)2}2(bipy)] moiety, in the presence of with C6H2()2()2, to an electronic state characteristic of the high spin state though incident x-ray fluences, has a thermal activation energies are determined to 14–18 meV for a range of mixing ratios from 1:2 to 1:10. Those activation energies are also significantly reduced as compared to values of 60–80 meV found for nanometer thin films of [Fe{H2B(pz)2}2(bipy)] on SiO2.

  • Exploring weight-dependent density-functional approximations for ensembles in the Hubbard dimer

    Killian Deur, Laurent Mazouin, Bruno Senjean, Emmanuel Fromager
    The European Physical Journal B: Condensed Matter and Complex Systems, 2018, 91 (7), ⟨10.1140/epjb/e2018-90124-7⟩ | Publiée le 1 juillet 2018
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    Gross-Oliveira-Kohn density-functional theory (GOK-DFT) is an extension of DFT to excited states where the basic variable is the ensemble density, i.e. the weighted sum of ground- and excited-state densities. The ensemble energy (i.e. the weighted sum of ground- and excited-state energies) can be obtained variationally as a functional of the ensemble density. Like in DFT, the key ingredient to model in GOK-DFT is the exchange-correlation functional. Developing density-functional approximations (DFAs) for ensembles is a complicated task as both density and weight dependencies should in principle be reproduced. In a recent paper [Phys. Rev. B 95, 035120 (2017)], the authors applied exact GOK-DFT to the simple but nontrivial Hubbard dimer in order to investigate (numerically) the importance of weight dependence in the calculation of excitation energies. In this work, we derive analytical DFAs for various density and correlation regimes by means of a Legendre-Fenchel transform formalism. Both functional and density driven errors are evaluated for each DFA. Interestingly, when the ensemble exact-exchange-only functional is used, these errors can be large, in particular if the dimer is symmetric, but they cancel each other so that the excitation energies obtained by linear interpolation are always accurate, even in the strongly correlated regime.

  • Mononuclear oxovanadium(IV) Schiff base complex: Synthesis, spectroscopy, electrochemistry, DFT calculation and catalytic activity

    Souad Dekar, Kamel Ouari, Sabrina Bendia, Douniazed Hannachi, Jean Weiss
    Journal of Organometallic Chemistry, 2018, 866, pp.165-176. ⟨10.1016/j.jorganchem.2018.04.015⟩ | Publiée le 1 juillet 2018
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    A new complex of oxovanadium, VOL has been synthesized from Schiff base ligand obtained by the condensation of o-phenylenediamine and 5-bromo-salicylaldehyde. All new compounds have been characterized by 1H NMR, IR spectra, UV–Vis spectroscopy, elemental analysis and mass spectrometry. The molar conductance data revealed that the metal complex is a non-electrolyte. Thermal analysis techniques (TGA/DTA) of the ligand and the complex were performed. The proposed structures for the free ligand and the corresponding vanadium complex were corroborated by the use of geometry optimization and conformational analysis. The solid state structure of complex VOL was fully determined by single crystal X-ray diffraction analysis. Similar electrochemical behavior for both the ligand and the corresponding complex have been observed by cyclic voltammetry (CV). The complex gave a metal-based one-electron quasi-reversible redox couple at 606 mV/SCE corresponding to the VOIV/VOV redox process which was consistent with the hydrodynamic voltammograms. Additional peaks in the CVs that were growing with the scan rate have been attributed to consecutive one-electron reduction of the ligand. The catalytic activity of the oxovanadium Schiff base complex VOL was tested in the oxidation reaction of cyclohexene. The efficiency of the catalyst was influenced by the nature of the oxidant. The results showed that the complex was highly active and selective for cyclohexenone in optimized conditions.

  • Unconventional Synthesis of a Cu I Rotaxane with a Superacceptor Stopper: Ultrafast Excited-State Dynamics and Near-Infrared Luminescence

    Yann Trolez, Aaron D. Finke, Fabio Silvestri, Filippo Monti, Barbara Ventura, Corinne Boudon, Jean Paul Gisselbrecht, W. Bernd Schweizer, Jean-Pierre Sauvage, Nicola Armaroli, François Diederich
    Chemistry - A European Journal, 2018, 24 (41), pp.10422-10433. ⟨10.1002/chem.201801161⟩ | Publiée le 27 juin 2018
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    A CuI bis-phenanthroline rotaxane was prepared by using the [2+2] cycloaddition-retroelectrocyclization (CA-RE) reaction to graft a bulky dicyanoquinodimethane (DCNQ) stopper. The electronic properties were investigated with electrochemical and photophysical techniques, in parallel with three reference compounds, namely, the DCNQ derivative alone, the DCNQ-based phenanthroline ligand, and an analogue CuI complex lacking the DCNQ moiety. In all the systems containing the DCNQ unit, the lowest electronic excited states are centered thereon, with the singlet level (S1) located at about 1.0 eV, as suggested by TDDFT calculations. Accordingly, in the DCNQ-equipped rotaxane, the typical metal-to-ligand charge-transfer luminescence of the CuI center is totally quenched. Ultrafast transient absorption and emission studies show that, in the rotaxane, the final sink of photoinduced processes is the lowest singlet state of the DCNQ moiety (S1), which exhibits strong charge-transfer character and a lifetime of 0.4 ps. Its deactivation leads to population of another excited state with a lifetime of 1.3 ps, which can be the related triplet state (T1) or a vibrationally hot level (hot-S0). Notably, S1 also shows stimulated fluorescence in the near-infrared (NIR) region between 1100 and 1500 nm, corroborating the TDDFT prediction. This unusual finding opens up the study of ultrashort-lived NIR luminescence in organic donor–acceptor systems.

  • An intermediate along the recovery stroke of myosin VI revealed by X-ray crystallography and molecular dynamics

    Florian Blanc, Tatiana Isabet, Hannah Benisty, H. Lee Sweeney, Marco Cecchini, Anne Houdusse
    Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (24), pp.6213-6218. ⟨10.1073/pnas.1711512115⟩ | Publiée le 12 juin 2018
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    Myosins form a class of actin-based, ATPase motor proteins that mediate important cellular functions such as cargo transport and cell motility. Their functional cycle involves two large-scale swings of the lever arm: the force-generating powerstroke, which takes place on actin, and the recovery stroke during which the lever arm is reprimed into an armed configuration. Previous analyses of the prerecovery (postrigor) and postrecovery (prepowerstroke) states predicted that closure of switch II in the ATP binding site precedes the movement of the converter and the lever arm. Here, we report on a crystal structure of myosin VI, called pretransition state (PTS), which was solved at 2.2 Å resolution. Structural analysis and all-atom molecular dynamics simulations are consistent with PTS being an intermediate along the recovery stroke, where the Relay/SH1 elements adopt a postrecovery conformation, and switch II remains open. In this state, the converter appears to be largely uncoupled from the motor domain and explores an ensemble of partially reprimed configurations through extensive, reversible fluctuations. Moreover, we found that the free energy cost of hydrogen-bonding switch II to ATP is lowered by more than 10 kcal/mol compared with the prerecovery state. These results support the conclusion that closing of switch II does not initiate the recovery stroke transition in myosin VI. Rather, they suggest a mechanism in which lever arm repriming would be mostly driven by thermal fluctuations and eventually stabilized by the switch II interaction with the nucleotide in a ratchet-like fashion.

  • Spin State Chemistry: Modulation of Ligand pKa by Spin State Switching in a [2´2] Iron(II) Grid-Type Complex

    Sébastien Dhers, Abhishake Mondal, David Aguilà, Juan Morua Ramirez, Sergi Vela, Pierre Dechambenoit, Mathieu Rouzieres, Jonathan R Nitschke, Rodolphe Clérac, Jean-Marie Lehn
    Journal of the American Chemical Society, 2018, 140 (26), pp.8218 - 8227. ⟨10.1021/jacs.8b03735⟩ | Publiée le 8 juin 2018
    Article dans une revue

    The iron(II) [2´2] grid complex Fe-8H has been synthesized and characterized. It undergoes spin-crossover (SCO) upon deprotonation of the hydrazine-based terpyridine-like ligand. The deprotonation patterns have been determined by X-ray crystallography and 1H NMR spectroscopy and discussed in relation to the spin state of the iron(II) centers which influences greatly the pKa of the ligand. The synthesis of the magnetically-silent zinc(II) analogue is also reported and its (de)protonation behavior has been characterized to serve as reference for the study of the Fe II grid complexes. DFT computations have also been performed in order to investigate how the successive deproto-nation of the bridging ligands affects the SCO behavior within the grid. n INTRODUCTION The search for materials having tunable properties is a very active research area. 1 In this context, special attention has been given to the modulation of magnetic properties by physical means such as temperature, 2 pressure and light, 2,3 or through chemical processes affecting the ligand field in complexes. 4 Spin crossover (SCO) complexes are interesting candidates, particularly iron(II) complexes, which exhibit a switching process between a paramagnetic high spin state (HS, S = 2) and a dia-magnetic low spin state (LS, S = 0). 5 Polymetallic [2´2] grid-like complexes 6 with modulable properties can be seen as molecular precursors of metallosupramolecular architectures or materials due to their ability to generate ordered arrangements of multiple grid entities by self-assembly at the air-water interface, 7 through hydrogen-bond formation in the solid array 8 and on adsorption onto a graphite surface. 9 It has been shown that tetranuclear iron(II) [2´2] grids undergo multiple spin state switching under the action of three physical triggers, temperature, pressure and light. 2,10 The influence of hydrogen-bond donors, 11 as well as that of counterions and solvent, 12 have also been shown to allow the modulation of the magnetism of these architectures. On the other hand, [2´2] grids presenting ionizable N-H sites undergo reversible protonic modulation of optical and redox properties. 13 One thus expects that the magnetic properties of such entities may also be modulated by reversible ligand deprotonation without destruction of the initial complex. 2,13 The hydrazine-based ditopic isomeric ligand H2L (Scheme 1) offers the opportunity to both generate [2´2] grid architectures by self-assembly and to study the protonic modulation of their physico-chemical properties, due to their ionizable N-H sites. The final step of the synthesis of such a ditopic ligand consists in the condensation reaction of one equivalent of 4,6-bis(hydrazino)-2-phenyl-pyrimidine with two equivalents of 2-pyri-dine-carboxaldehyde to yield ligand H2L. This ligand contains two com-plexation subunits of terpyridine (terpy) type, where the hydrazone function acts as an ionizable group whose acidity is greatly enhanced on complexation, as compared to the free ligands. Scheme 1. Synthesis of the ditopic ionizable hydrazine-based ligand H2L and its self-assembly into the corresponding tetranu-clear [Fe4(H2L)4] 8+ [2´2] grid complex by coordination with Fe II cations. Red spheres represent Fe metal ions. Hydrogen atoms that are colored in blue emphasize the deprotonation sites on the [2´2] grid. ABSTRACT: When immersed in solutions containing Cu(II) cations, the microporous metal−organic material P11 ([Cd 4 (BPT) 4 ]·[Cd(C 44 H 36 N 8)(S)]·[S], BPT = bi-phenyl-3,4′,5-tricarboxylate) undergoes a transformation of its [Cd 2 (COO) 6 ] 2− molecular building blocks (MBBs) into novel tetranuclear [Cu 4 X 2 (COO) 6 (S) 2 ] MBBs to form P11-Cu. The transformation occurs in single-crystal to single-crystal fashion, and its stepwise mechanism was studied by varying the Cd 2+ /Cu 2+ ratio of the solution in which crystals of P11 were immersed. P11-16/1 (Cd in framework retained, Cd in encapsulated porphyrins exchanged) and other intermediate phases were thereby isolated and structurally characterized. P11-16/1 and P11-Cu retain the microporosity of P11, and the relatively larger MBBs in P11-Cu permit a 20% unit cell expansion and afford a higher surface area and a larger pore size. P orous metal−organic materials (MOMs) that incorporate

  • CO quantum dynamics diffusion on Cu(1 0 0)

    David Zanuttini, Fabien Gatti, Roberto Marquardt
    Chemical Physics, 2018, 509, pp.3 - 12. ⟨10.1016/j.chemphys.2018.03.037⟩ | Publiée le 1 juin 2018
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    We present a quantum mechanical study of the diffusion of CO molecules on the Cu(0 0 1) surface. We use the Strasbourg-Amsterdam-Postdam potential surface and a “non-tunnel”-variant hereof; to mimic an initial state that is localized in one adsorption well, a “local-potential-shift” concept is introduced; the Multi Configuration Time Dependent Hartree method to perform the calculations. Special emphasis is placed on the effect of the dimensionality of the models. Surprisingly, tunneling plays an important role typically 1 ps after the beginning of the dynamics; it dominates at around 1 ns and might, at least partly, explain the long diffusion rates measured experimentally for the system.

  • Site-occupation embedding theory using Bethe ansatz local density approximations

    Bruno Senjean, Naoki Nakatani, Masahisa Tsuchiizu, Emmanuel Fromager
    Physical Review B, 2018, 97 (23), ⟨10.1103/PhysRevB.97.235105⟩ | Publiée le 1 juin 2018
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    Site-occupation embedding theory (SOET) is an alternative formulation of density-functional theory (DFT) for model Hamiltonians where the fully-interacting Hubbard problem is mapped, in principle exactly, onto an impurity-interacting (rather than a non-interacting) one. It provides a rigorous framework for combining wavefunction (or Green function) based methods with DFT. In this work, exact expressions for the per-site energy and double occupation of the uniform Hubbard model are derived in the context of SOET. As readily seen from these derivations, the so-called bath contribution to the per-site correlation energy is, in addition to the latter, the key density functional quantity to model in SOET. Various approximations based on Bethe ansatz and perturbative solutions to the Hubbard and single impurity Anderson models are constructed and tested on a one-dimensional ring. The self-consistent calculation of the embedded impurity wavefunction has been performed with the density matrix renormalization group method. It has been shown that promising results are obtained in specific regimes of correlation and density. Possible further developments have been proposed in order to provide reliable embedding functionals and potentials.

  • Trapping of N -Acyliminium Ions with Enamides

    Lucile Andna, Laurence Miesch
    Organic Letters, 2018, 20 (11), pp.3430-3433. ⟨10.1021/acs.orglett.8b01407⟩ | Publiée le 1 juin 2018
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    Enamides equipped with N-acyliminium ion precursors were obtained through reduction of ynamides tethered to N-imides. Intramolecular TMSOTf-mediated trapping of N-acyliminium ions provided a variety of polyfunctionalized medium-sized diaza-heterocycles of putative pharmacological interest.

  • Photovoltaic properties of supramolecular assemblies obtained by incorporation of Preysler's type polyoxometalate in a polycationic copolymer of porphyrin

    Zhaohui Huo, Antoine Bonnefont, Yiming Liang, Rana Farha, Michel Goldmann, Eric Saint-Aman, Hualong Xu, Christophe Bucher, Laurent Ruhlmann
    Electrochimica Acta, 2018, 274, pp.177 - 191. ⟨10.1016/j.electacta.2018.04.088⟩ | Publiée le 1 juin 2018
    Article dans une revue

    Poly-zinc-octaethylporphyrin/P5W30 films have been obtained through incorporation of Preyssler-type polyoxometalate ions, namely [NaP5W30O110] 14-(P5W30) into zinc octaethylporphyrin/viologen-based polymers (poly-ZnOEP) films. The latter has been achieved through a metathesis reaction involving exchange of the initial counter ions (PF6-) of the positively charged poly-ZnOEP by P5W30. The investigated polymers involve ZnOEP units covalently linked through either dicationic mono-viologen or through tetracationic bis-viologen spacers. These copolymers have been characterized by UV/Vis spectroscopy, X-ray photoelectron spectroscopy, electrochemistry, AFM and by electrochemical impedance spectroscopy. Formation of the polymers through electropolymerization of viologen and porphyrin building blocks was monitored by EQCM. QCM was also used to study the exchange of PF6-by [NaP5W30O110] 14-. The photovoltaic performances under visible light irradiation have also been investigated by photocurrent transient measurements carried out under visible illumination.

  • Effets sur la santé associés à l’inhalation d’imperméabilisants ou d’autres aérosols de résines hydrophobes. Revue de la littérature

    Robert Garnier, Jacques Manel, Patrick Nisse, Cécilia Solal, Jean-Luc Bourrain, Dominique Dupas, Robert Garnier, Michel Guerbet, Jean-Pierre Lepoittevin, Gael Le Roux, Stéphane Malard, Jacques Manel, Jean-Marc Sapori
    Toxicologie Analytique et Clinique, 2018, 30 (2), pp.120-135. ⟨10.1016/j.toxac.2018.02.002⟩ | Publiée le 1 juin 2018
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  • Biophysical Investigations Elucidating the Mechanisms of Action of Antimicrobial Peptides and Their Synergism

    Arnaud Marquette, Burkhard Bechinger
    Biomolecules, 2018, 8 (2), pp.18. ⟨10.3390/biom8020018⟩ | Publiée le 18 avril 2018
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    Biophysical and structural investigations are presented with a focus on the membrane lipid interactions of cationic linear antibiotic peptides such as magainin, PGLa, LL37, and melittin. Observations made with these peptides are distinct as seen from data obtained with the hydrophobic peptide alamethicin. The cationic amphipathic peptides predominantly adopt membrane alignments parallel to the bilayer surface; thus the distribution of polar and non-polar side chains of the amphipathic helices mirror the environmental changes at the membrane interface. Such a membrane partitioning of an amphipathic helix has been shown to cause considerable disruptions in the lipid packing arrangements, transient openings at low peptide concentration, and membrane disintegration at higher peptide-to-lipid ratios. The manifold supramolecular arrangements adopted by lipids and peptides are represented by the 'soft membranes adapt and respond, also transiently' (SMART) model. Whereas molecular dynamics simulations provide atomistic views on lipid membranes in the presence of antimicrobial peptides, the biophysical investigations reveal interesting details on a molecular and supramolecular level, and recent microscopic imaging experiments delineate interesting sequences of events when bacterial cells are exposed to such peptides. Finally, biophysical studies that aim to reveal the mechanisms of synergistic interactions of magainin 2 and PGLa are presented, including unpublished isothermal titration calorimetry (ITC), circular dichroism (CD) and dynamic light scattering (DLS) measurements that suggest that the peptides are involved in liposome agglutination by mediating intermembrane interactions. A number of structural events are presented in schematic models that relate to the antimicrobial and synergistic mechanism of amphipathic peptides when they are aligned parallel to the membrane surface.

  • Two Stereoinduction Events in One C−H Activation Step: A Route towards Terphenyl Ligands with Two Atropisomeric Axes

    Quentin Dherbassy, Jean-Pierre Djukic, Joanna Wencel-Delord, Francoise Colobert-Leuenberger
    Angewandte Chemie, 2018, 130 (17), pp.4758-4762. ⟨10.1002/ange.201801130⟩ | Publiée le 16 avril 2018
    Article dans une revue

    Herein we disclose the synthesis of original chiral scaffolds—ortho‐orientated terphenyls presenting two atropisomeric Ar–Ar axes. These unusual structures were built up by using the C−H activation approach, and remarkably, both chiral axes were controlled with excellent stereoselectivity in a single transformation. During the reaction, not only does atroposelective functionalization of a biaryl precursor occur to establish one stereogenic axis, but an unprecedented atropo‐stereoselective C−H arylation also takes place to generate the second stereogenic element. These enantiomerically pure ortho‐terphenyls show an original tridimensional structure and thus constitute a unique foundation for building up a library of enantiomerically pure bidentate ligands, such as the new ligands S/N‐Biax and diphosphine BiaxPhos.

  • Recent Developments on the Use of Group 13 Metal Complexes in Catalysis

    Samuel Dagorne, Rudolf Wehmschulte
    ChemCatChem, 2018, 10 (12), pp.2509-2520. ⟨10.1002/cctc.201800045⟩ | Publiée le 14 avril 2018
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    The present Minireview highlights the most representative and emerging developments reported since 2012 on the use of well‐defined group 13 metal species in homogeneous catalysis. Apart from their use in polymerization catalysis, group 13 metal catalysts have primarily been developed for the functionalization of polar/unsaturated small molecules, with most reactions involving C−C, C−O or C−N double or triple bond functionalization (most frequently (C 6 F 5 ) 3 Al and low‐coordinate Al cations). The exploitation of group 13 catalysts for CO 2 functionalization chemistry has made remarkable advances over the past five years, including the development of Al‐ and Ga‐based complexes for CO 2 hydrosilylation/hydroboration. Highly effective Al catalysts for the production of cyclic carbonates via CO 2 /epoxide coupling are also discussed. The emerging use of simple Group 13 metal Lewis pairs for the controlled polymerization of polar monomers is also reviewed.

  • Copper-Catalyzed Aziridination with Redox-Active Ligands: Molecular Spin Catalysis

    Yufeng Ren, Khaled Cheaib, Jérémy Jacquet, Hervé Vezin, Louis Fensterbank, Maylis Orio, Sébastien Blanchard, Marine Desage-El Murr
    Chemistry - A European Journal, 2018, 24 (20), pp.5086 - 5090. ⟨10.1002/chem.201705649⟩ | Publiée le 6 avril 2018
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    Small-molecule catalysts as mimics of biological systems illustrate the chemists’ attempts at emulating the tantalizing abilities displayed by nature's metalloenzymes. Among these innate behaviors, spin multistate reactivity is used by biological systems as it offers thermodynamic leverage towards challenging chemical reactivity but this concept is difficult to translate into the realm of synthetic organometallic catalysis. Here, we report a rare example of molecular spin catalysis involving multistate reactivity in a small-molecule biomimetic copper catalyst applied to aziridination. This behavior is supported by spin state flexibility enabled by the redox-active ligand.

  • Anderson-Type Polyoxometalates Functionalized by Tetrathiafulvalene Groups Synthesis, Electrochemical Studies, and NLO Properties

    Amandine Boulmier, Antoine Vacher, Dejin Zang, Shu Yang, Ali Saad, Jerome Marrot, Olivier Oms, Pierre Mialane, Isabelle Ledoux, Laurent Ruhlmann, Dominique Lorcy, Anne Dolbecq
    Inorganic Chemistry, 2018, 57 (7), pp.3742-3752. ⟨10.1021/acs.inorgchem.7b02976⟩ | Publiée le 2 avril 2018
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    Three polyoxometalates (POMs) functionalized by tetrathiafulvalene (TTF) molecules have been synthesized by a coupling reaction between the Anderson-type POMs [MnMoO{(OCH)CNH}] or [AlMoO(OH){(OCH)CNH}] and the TTF carboxylic acid derivative (MeS)TTF(S-CH-COH). The monofunctionalized TTF-AlMo POM contains one TTF group covalently grafted on an Al Anderson platform. The symmetrical TTF-MnMo-TTF POM possesses two TTF groups grafted on each side of a Mn Anderson derivative while the asymmetrical TTF-MnMo-SP POM contains a TTF and a spiropyran groups. These three trianionic species have been characterized by elemental analysis, H and C NMR, FT-IR spectroscopy, ESI-MS spectrometry, and single-crystal X-ray diffraction (for TTF-MnMo-TTF). In the solid state, the grafted TTF molecules of TTF-MnMo-TTF POMs interact via S···S and π···π interactions and form chains. The electrochemical properties of the complexes reflect the contributions of both the inorganic POM and the TTF moieties. Despite adsorption of the oxidized hybrid species on the Pt grid working electrode, UV-vis-NIR spectroelectrochemical investigations evidence peaks characteristic of the oxidation of the TTF units. Finally, hyper-Rayleigh scattering (HRS) measurements show that the three novel TTF derivatives exhibit β values between 20 and 37 × 10 esu. Moreover it is observed that the oxidation of the TTF moieties by Fe ions increases the NLO response. These values are in the order of magnitude of that found for the well-known 4-dimethylamino- N-methyl-4-stilbazolium (DAS) cation (β = 60 × 10 esu).

  • Milling effect on the photo-activated properties of $$\hbox {TiO}_{2}$$ TiO 2 nanoparticles: electronic and structural investigations

    Youcef Messai, Bertrand Vileno, David Martel, Philippe Turek, Djamel Eddine Mekki
    Bulletin of Materials Science, 2018, 41 (2), pp.57. ⟨10.1007/s12034-018-1572-8⟩ | Publiée le 30 mars 2018
    Article dans une revue

    Commercial PC105 titanium dioxide nanoparticles were studied under mechanical milling process. The effect of milling time and speed on the structural and electronic properties of TiO2 powder was then investigated using X-ray powder diffraction (XRD), dynamic light scattering (DLS), transmission electronic microscopy (TEM), electron paramagnetic resonance (EPR) and UV–visible spectroscopy. The related photo-catalytic properties of the milled nanoparticles were probed following the degradation rate of methylene orange (MO) under UV-light irradiation and through EPR spin- scavenging approach. Comparison with pristine powder shows that milled nanoparticles are significantly less reactive upon illumination, despite decreased radius and hence, higher specific area. Such low yield of reactive species is attributed to the apparition of the amorphous TiO2 and brookite phase upon milling, as well as increased charge carrier recombination as pointed out by the presence of sacrificial electron donor.

  • Statu quo sur la méthanation du dioxyde de carbone : une revue de la littérature

    Julien Ducamp, Alain Bengaouer, Pierre Baurens, Ioana Fechete, Philippe Turek, François Garin
    Comptes Rendus. Chimie, 2018, 21 (3-4), pp.427-469. ⟨10.1016/j.crci.2017.07.005⟩ | Publiée le 1 mars 2018
    Article dans une revue

    This review summarizes the statu quo and the perspectives of chemical methanation. CO2 methanation, including catalyst deactivation, reactors, mechanisms, and thermodynamics are presented. This reaction serves as a test bed for our fundamental understanding of heterogeneous catalysis and is used in various industrial processes, including the removal of oxo-compounds (COx) in the feed gas for the ammonia synthesis, in connection with the gasification of coal, where it can be used to produce methane from synthesis gas, and in relation to Fischer–Tropsch's synthesis. Moreover, CO2 methanation became of interest as a renewable energy storage system based on a “power-to-gas” conversion process by SNG (synthetic natural gas) production integrating water electrolysis and CO2 methanation as a highly effective way to store the energy produced by renewables sources. The effectiveness and efficiency of the “power-to-gas” plants strongly depends on the CO2-methanation process.

  • Sphalerite Cu/ZnS Nanoparticles Derived from Cu/Zn‐ZIF‐8 for the Photocatalytic Degradation and Adsorption of Dyes

    Gang Xiong, Yanan Wang, Yaguang Sun, Lixin You, Baoyi Ren, Zhenhe Xu, Yongke He, Laurent Ruhlmann, Fu Ding
    European Journal of Inorganic Chemistry, 2018, 2018 (8), pp.1038-1046. ⟨10.1002/ejic.201701312⟩ | Publiée le 28 février 2018
    Article dans une revue

    A series of Cu-doped ZnS sphalerite nanoparticles were synthesized through the reactions between Cu2+-doped zeolitic imidazolate frameworks (ZIF-8) with different Cu/Zn molar ratios as the metal sources and different sulfur sources, namely, carbon disulfide (CD), thioacetamide (TAA), sodium sulfide (SS), and thiourea (TU), under solvothermal conditions. The Cu-doped ZnS samples exhibited nanospherical morphologies with diameters of less than 100 nm and high Brunauer–Emmett–Teller (BET) surface areas. The photocatalytic properties of the obtained samples were investigated through the photodegradation of methylene blue (MB) aqueous solutions under visible-light illumination as a representative example. The results indicate that Cu/ZnS-20-SS presents a remarkable photocatalytic degradation rate of more than 90 % over 1 h and can be reused four times without major loss of activity. In addition, an adsorption investigation revealed that the Cu/ZnS-TAA series can rapidly adsorb dyes such as MB and methyl orange (MO) with high adsorption capacities of ca. 260 mg/g within 10 min, and saturated adsorption capacities of close to 300 mg/g can be achieved.

  • Giant Glycosidase Inhibitors: First- and Second-Generation Fullerodendrimers with a Dense Iminosugar Shell

    Jean-François Nierengarten, Jérémy Schneider, Thi Minh Nguyet Trinh, Antoine Joosten, Michel Holler, Mathieu Lepage, Anne Bodlenner, M. Isabel García-Moreno, Carmen Ortiz mellet, Philippe Compain
    Chemistry - A European Journal, 2018, 24 (10), pp.2483-2492. ⟨10.1002/chem.201705600⟩ | Publiée le 16 février 2018
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    The multivalent effect in glycosidase inhibition is a new topic in glycoscience that has emerged a few years ago, with the discovery of neoglycoclusters displaying strong binding enhancements over the corresponding monovalent inhibitor. Iminosugar–fullerene conjugates with high valencies have been prepared from iminosugar‐terminated dendrons and a clickable fullerene hexa‐adduct scaffold. The simultaneous grafting of twelve dendrons allows for a very fast dendritic growth thus limiting the number of synthetic steps required to prepare compounds with a high number of peripheral units. The grafting of first‐ and second‐generation dendrons provided fullerodendrimers surrounded by 36 and 108 peripheral iminosugars, respectively. Inhibition studies have been carried out with a panel of glycosidases. In the particular case of Jack bean α‐mannosidase, the 108‐valent nanoconstruct displays inhibition in the nanomolar range and an additional binding enhancement of one order of magnitude when compared to the 36‐valent analogues.

  • Enhancement of Push-Pull Properties of Pentafulvene and Pentafulvalene Derivatives by Protonation at Carbon

    Sophie Haberland, Aaron D. Finke, Nicolas Kerisit, Claudine Katan, Yann Trolez, Przemyslaw Gawel, Ivo Leito, Mart Lokov, Robert Jarviste, Karl Kaupmees, Nils Trapp, Laurent Ruhlmann, Corinne Boudon, Daniel Himmel, Francois Diederich
    European Journal of Organic Chemistry, 2018, 2018 (6), pp.739-749. ⟨10.1002/ejoc.201800039⟩ | Publiée le 14 février 2018
    Article dans une revue

    We report visible color changes and new intense, bathochromically shifted bands in absorption spectra that reach into the near-infrared region (up to 862 nm) upon protonation of nine pentafulvene and expanded pentafulvalene derivatives. This phenomenon can only be explained by the formation of carbocations with highly delocalized charges. Solution pKa values in organic solvents were determined, making use of the method of relative basicity measurements. All seven 6-phenylpentafulvenes are weak bases, and pKa values range from 0.92 to 10.29 in acetonitrile and from 1.77 to 6.46 in 1,2-dichloroethane. For the 6-phenylfulvenes with varying para-substituents on the phenyl ring, pKa values correlate well with the Hammett parameters para. Furthermore, for most compounds, electrochemical reduction is significantly facilitated by protonation. Extensive theoretical and NMR studies strongly support the postulated protonation at carbon.

  • Development of an electron paramagnetic resonance methodology for studying the photo-generation of reactive species in semiconductor nano-particle assembled films

    Marek Twardoch, Youcef Messai, Bertrand Vileno, Yannick Hoarau, Djamel Mekki, Olivier Felix, Philippe Turek, Jean Weiss, Gero Decher, David Martel
    Molecular Physics, 2018, 116 (12), pp.1558-1564. ⟨10.1080/00268976.2018.1433882⟩ | Publiée le 13 février 2018
    Article dans une revue

    An experimental approach involving electron paramagnetic resonance is proposed for studying photogenerated reactive species in semiconductor nano-particle-based films deposited on the internal wall of glass capillaries. This methodology is applied here to nano-TiO2 and allows a semiquantitative analysis of the kinetic evolutions of radical production using a spin scavenger probe.

  • Cavitand Chemistry Nickel Half-Sandwich Complexes with Imidazolylidene Ligands Bearing One or Two Resorcinarenyl Substituents

    Nallusamy Natarajan, Thierry Chavagnan, David Semeril, Eric Brenner, Dominique Matt, Rengan Ramesh, Loic Toupet
    European Journal of Inorganic Chemistry, 2018, 2018 (7), pp.890-896. ⟨10.1002/ejic.201701143⟩ | Publiée le 12 février 2018
    Article dans une revue

    Two imidazolium salts, one with a single N-mu(4)-tetramethylenedioxyresorcin[4]arenyl substituent, the other with two, have been used as pro-ligands (LH) for the synthesis of nickel half-sandwich complexes of the type [NiCpClL] (Cp = cyclopentadienyl). NMR and X-ray structural investigations revealed that in both complexes the NiCp moiety is positioned at the wider entrance of the resorcinarenyl cavity, this location providing high steric encumbrance around the metal centre. Both complexes, once activated with NaBH4, catalysed the dimerisation of ethylene, the highest activity [555 mol(C2H4)mol(Ni)(-1)h(-1)] being observed with the complex bearing two cavitand substituents.

  • Evidence for effective structure-based neuromodulatory effects of new analogues of neurosteroid allopregnanolone

    Omar Taleb, C Patte-Mensah, L Meyer, Veronique Kemmel, Philippe Geoffroy, Michel Miesch, Ayikoe-Guy Mensah-Nyagan
    Journal of Neuroendocrinology, 2018, 30 (2), ⟨10.1111/jne.12568⟩ | Publiée le 1 février 2018
    Article dans une revue

    The neurosteroid allopregnanolone (AP) modulates neuroendocrine/neurobiological processes, including hypothalamic-­pituitary-­adrenocortical activities, pain, anxiety, neurogenesis and neuroprotection. These observations raised the hope of developing AP-­based therapies against neuroendocrine and/or neurodegenerative disorders. However, the pleiotropic actions of AP, particularly its cell-­proliferation-­promoting effects, hamper the development of selective/targeted therapies. For example, although AP-­induced neurogenesis may serve to compensate neuronal loss in degenerative brains, AP-­evoked cell-­proliferation is contraindicated for steroid-­sensitive cancer patients. To foster progress, we synthesised 4 novel AP analogues of neurosteroids (ANS) designated BR053 (12-o­ xo-e­ pi-­AP), BR297 (O-­allyl-­epi-­AP), BR351 (O-­allyl-­AP) and BR338 (12-­oxo-­AP). First, because AP is well-­known as allosteric modulator of GABAA receptors (GABAA-­R), we used the electrophysiological patch-­clamp technique to determine the structure-­activity relationship of our ANS on GABAA-­activated current in NCB20 cells expressing functional GABAA-­R. We found that the addition of 12-o­ xo-g­ roup did not significantly change the respective positive or negative allosteric effects of 3α-­AP or 3β-(­epi)-­AP analogues. Importantly, substitution of the 3α-h­ ydroxyl-­ group by 3α-O­ -­allyl highly modified the ANS activities. Unlike AP, BR351 induced a long-l­asting desensitisation/inhibition of GABAA-­R. Interestingly, replacement of the 3β-­hydroxyl by 3β-O­ -­allyl (BR297) completely reversed the activity from negative to positive allosteric action. In a second step, we compared the actions of AP and ANS on SH-­SY5Y neuronal cell viability/proliferation using MTT-­reduction assays. Different dose-r­ esponse curves were demonstrated for AP and the ANS. By contrast to AP, BR297 was totally devoid of cell-­proliferative effect. Finally, we compared AP and ANS abilities to protect against oxidative stress-­induced neuronal death pivotally involved in neurodegenerative diseases. Both BR351 and BR297 had notable advantages over AP in protecting SH-­SY5Y cells against oxidative stress-­induced death. Thus, BR297 appears to be a potent neuroprotective compound devoid of cell-­proliferative activity. Altogether, our results suggest promising perspectives for the development of neurosteroid-­based selective and effective strategies against neuroendocrine and/or neurodegenerative disorders.

  • Potential of EPR spin-trapping to investigate in situ free radicals generation from skin allergens in reconstructed human epidermis: cumene hydroperoxide as proof of concept

    Salen Kuresepi, Bertrand Vileno, Philippe Turek, Jean-Pierre Lepoittevin, Elena Giménez-Arnau
    Free Radical Research, 2018, 52 (2), pp.171-179. ⟨10.1080/10715762.2017.1420906⟩ | Publiée le 1 février 2018
    Article dans une revue

    The first step in the development of skin sensitisation to a chemical, and in the elicitation of further allergic contact dermatitis (ACD), is the binding of the allergen to skin proteins after penetrating into the epidermis. The so-formed antigenic adduct is then recognised by the immune system as foreign to the body. Sensitising organic hydroperoxides derived from autoxidation of natural terpenes are believed to form antigens through radical-mediated mechanisms, although this has not yet been established. So far, in vitro investigations on reactive radical intermediates derived from these skin sensitisers have been conducted in solution, yet with experimental conditions being far away from real-life sensitisation. Herein, we report for the first time, the potential use of EPR spin-trapping to study the in situ generation of free radicals derived from cumene hydroperoxide CumOOH in a 3D reconstructed human epidermis (RHE) model, thus much closer to what may happen in vivo. Among the undesirable effects associated with dermal exposure to CumOOH, it is described to cause allergic and irritant dermatitis, being reported as a significant sensitiser. We considered exploiting the usage of spin-trap DEPMPO as an extensive view of all sort of radicals derived from CumOOH were observed all at once in solution. We showed that in the EpiskinTM RHE model, both by incubating in the assay medium and by topical application, carbon radicals are mainly formed by redox reactions suggesting the key role of CumOOH-derived carbon radicals in the antigen formation process.

  • Sterically Bulky NHC Adducts of GaMe3 and InMe3 for H2 Activation and Lactide Polymerization

    Anaëlle Bolley, Gilles Schnee, Lucas Thévenin, Béatrice Jacques, Samuel Dagorne
    Inorganics, 2018, 6 (1), pp.23. ⟨10.3390/inorganics6010023⟩ | Publiée le 25 janvier 2018
    Article dans une revue

    <div><p>The sterically bulky Ga(III) and In(III) (IPr*)MMe 3 adducts (1 and 2) and (SItBu)MMe 3 adducts (3 and 4) (M = Ga, In; IPr* = 1,3-bis{2,6-bis(diphenylmethyl)-4-methylphenyl}-1,3-dihydroimidazol-2-ylidene; SItBu = 1,3-bis(1,1-dimethylethyl)-imidazolidin-2-ylidene) were prepared and structurally characterized, allowing an estimation of the steric hindrance of such Lewis pairs (yields in 1-4: 92%, 90%, 73%, and 42%, respectively). While the IPr* adducts 1 and 2 are robust species, the more severely congested SItBu adducts 3 and 4 are more reactive and exhibit a limited stability in solution. Adduct (SItBu)GaMe 3 (3) reacts quickly with H 2 at room temperature to afford the corresponding aminal product, 1,3-di-tert-butylimidazolidine (5), along with free GaMe 3 . Such Frustrated Lewis Pair (FLP) reactivity constitutes the first instance of a H 2 activation involving a simple trialkyl GaR 3 species. Adduct 3 also mediates the ring-opening polymerization (ROP) of rac-lactide at room temperature to afford cyclic polylactide (PLA).</p></div>

  • A water-soluble supramolecular complex that mimics the heme/copper hetero-binuclear site of cytochrome c oxidase

    Hiroaki Kitagishi, Daiki Shimoji, Takehiro Ohta, Ryo Kamiya, Yasuhiro Kudo, Akira Onoda, Takashi Hayashi, Jean Weiss, Jennifer Wytko, Koji Kano
    Chemical Science, 2018, 9 (7), pp.1989-1995. ⟨10.1039/c7sc04732k⟩ | Publiée le 15 janvier 2018
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    In mitochondria, cytochrome c oxidase (CcO) catalyses the reduction of oxygen (O2) to water by using a heme/copper hetero-binuclear active site. Here we report a highly efficient supramolecular approach for the construction of a water-soluble biomimetic model for the active site of CcO. A tridentate copper(II) complex was fixed onto 5,10,15,20-tetrakis(4-sulfonatophenyl)porphinatoiron(III) (Fe III TPPS) through supramolecular complexation between Fe III TPPS and a per-O-methylated b-cyclodextrin dimer linked by a (2,2 0 :6 0 ,2 00-terpyridyl)copper(II) complex (Cu II TerpyCD2). The reduced Fe II TPPS/Cu I TerpyCD 2 complex reacted with O2 in an aqueous solution at pH 7 and 25 °C to form a superoxo-type Fe III-O2 À / Cu I complex in a manner similar to CcO. The pH-dependent autoxidation of the O2 complex suggests that water molecules gathered at the distal Cu site are possibly involved in the Fe III-O2 À /Cu I superoxo complex in an aqueous solution. Electrochemical analysis using a rotating disk electrode demonstrated the role of the FeTPPS/CuTerpyCD2 hetero-binuclear structure in the catalytic O2 reduction reaction.

  • Benzimidazolium‐ and Benzimidazolilydene‐Capped Cyclodextrins: New Perspectives in Anion Encapsulation and Gold‐Catalyzed Cycloisomerization of 1,6‐Enynes

    Zeyneb Kaya, Lucile Andna, Dominique Matt, Embarek Bentouhami, Jean-Pierre Djukic, Dominique Armspach
    Chemistry - A European Journal, 2018, 24 (68), pp.17921-17926. ⟨10.1002/chem.201804710⟩ | Publiée le 1 janvier 2018
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    A new way of introducing a N-heterocyclic carbene cap onto cyclodextrins has been devised. The benzimidazolium intermediates were found to behave as receptors towards cavity matching anions. The corresponding C1- and C2-symmetrical regioisomeric carbene gold(I) complexes have been tested in a benchmark asymmetric cycloisomerization of 1,6-enynes. Up to 50 % ee was achieved for the enantioselective cycloisomerization of N-allyl-4-methyl-N-(3-phenylprop-2-yn-1-yl)benzenesulfonamide.

  • New luminescent copper(I) complexes with extended pi-conjugation

    Kevin Soulis, Christophe Gourlaouen, Chantal Daniel, Alessia Quatela, Fabrice Odobel, Errol Blart, Yann Pellegrin
    Polyhedron, 2018, 140 (SI), pp.42-50. ⟨10.1016/j.poly.2017.11.026⟩ | Publiée le 1 janvier 2018
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    While copper(I)-bis(diimine) complexes [Cu-I(L)(2)](+) are considered as potent substitutes for [Ru-II(bpy)(3)](2+), they exhibit low molar extinction coefficients with respect to ruthenium parent analogues. One interesting possibility to improve the light collection ability of [Cu-I(L)(2)](+) consists in increasing the length of the Cu-L dipole. In order to achieve this goal, we propose in this contribution to fuse aromatic rings onto the 2,9-di-nbutyl-1,10-phenanthroline core and examine how the properties of the corresponding copper(I) complexes are impacted. Electrochemical, absorption and emission properties are assessed; rewardingly, the envisioned approach was successful since extinction coefficients above 10,000 M-1.cm(-1) were measured. All copper(I) complexes remain photoluminescent, with emission maxima greatly varying from 725 to 815 nm, strongly affected by the molecular structures. A rationale to explain the variations of the emission quantum yields is proposed. (C) 2017 Elsevier Ltd. All rights reserved.

  • Measurement of interpeptidic Cu(II) exchange rate constants by static fluorescence quenching of tryptophan

    Cheryle N. Beuning, Béatrice Mestre-Voegtlé, Peter Faller, Christelle Hureau, Debbie C. Crans
    Inorganic Chemistry, 2018, 57 (9), pp.4791-4794. ⟨10.1021/acs.inorgchem.8b00182⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    The interpeptidic exchange of Cu(II) between biologically relevant peptides like Gly-His-Lys (GHK) was measured through proximity static fluorescence quenching of a noncoordinating tryptophan residue by Cu(II). The inability to spectrally distinguish between starting and final Cu(H–1GHK)+ complexes by the current methods was solved by the replacement of noncoordinating lysine for tryptophan in the starting complex, Cu(H–1GHW). Because the apoGHW is the only fluorescent species, the recovered fluorescence is directly proportional to the [Cu(II)]exchanged between GHW and GHK. The apparent second-order rate constants of the exchanges from Cu(H–1GHW) to GHK and DAHK are 1.6 (±0.2) × 102 and 5.0 (±0.7) × 101 M–1 s–1, respectively. The easy-to-implement kinetic fluorescent method described here for Cu(II) interpeptidic exchange can be expanded to other biological systems.

  • DNP solid-state NMR spectroscopy on membranes

    Burkhard Bechinger
    Emagres, 2018 | Publiée le 1 janvier 2018
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    Whereas solid-state NMR / DNP has become a well-established technique to significantly increase the signals of molecules embedded in homogeneous glassy matrices the enhancement factors observed in heterogeneous and/or matrix-free samples lag somewhat behind. The possible reasons for such differences, present limitations and future prospects of solid-state NMR / DNP are discussed in the context of membrane protein investigations. Membrane polypeptides and lipids are studied by MAS as well as oriented sample solid-state NMR approaches. Notably, even the more modest DNP signal enhancements obtained in such samples augment the signal intensities by one to two orders of magnitude, thus opening up new territory in structural biology by allowing the detection of new conformers, so far invisible intermediate states, or the acquisition of smaller quantities of membrane-associated polypeptides in much less time. New sample preparation protocols, dedicated instrumental hardware and specifically designed biradicals have much improved the application of DNP to membranes using MAS and/or oriented solid-state NMR technologies.

  • Modeling the adsorption equilibrium of small-molecule gases on graphene: effect of the volume to surface ratio

    Simone Conti, Marco Cecchini
    Physical Chemistry Chemical Physics, 2018, 20 (15), pp.9770-9779. ⟨10.1039/C7CP08047F⟩ | Publiée le 1 janvier 2018
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    In most technological applications involving liquids or gases interacting with solids, the first event is the adsorption of molecules onto a solid surface. Here, we focus on the theoretical understanding of adsorption equilibrium at the solid–gas interface. In the limit of physisorption, we find that adsorption probability is independent of the initial concentration of monomers, whereas it varies with the available volume to surface ratio, which depends on the experimental setup. This theoretical finding is verified numerically by molecular dynamics simulations of five small-molecule gases physisorbing on graphene. The simulations provide quantitative estimates of the adsorption free energy, which are used to benchmark analytical and numerical integrations of the corresponding partition functions. The significance of the above theoretical result is analyzed in the context of molecular self-assembly at surfaces and interfaces. Our interpretation indicates that there exist (at least) two distinct pathways for 2D self-assembly, which may or may not involve the formation of a 2D disordered intermediate. Also, it predicts that the critical concentration for self-assembly may be shifted by varying the aspect ratio of the experimental setup.

  • N-Terminal Cu-Binding Motifs (Xxx-Zzz-His, Xxx-His) and Their Derivatives: Chemistry, Biology and Medicinal Applications

    Paulina Gonzalez, Karolina Bossak, Ewelina Stefaniak, Christelle Hureau, Laurent Raibaut, Wojciech Bal, Peter Faller
    Chemistry - A European Journal, 2018, 24 (32), pp.8029-8041. ⟨10.1002/chem.201705398⟩ | Publiée le 1 janvier 2018
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    Peptides and proteins with N‐terminal amino acid sequences NH2‐Xxx‐His (XH) and NH2‐Xxx‐Zzz‐His (XZH) form well‐established high‐affinity CuII‐complexes. Key examples are Asp‐Ala‐His (in serum albumin) and Gly‐His‐Lys, the wound healing factor. This opens a straightforward way to add a high‐affinity CuII‐binding site to almost any peptide or protein, by chemical or recombinant approaches. Thus, these motifs, NH2‐Xxx‐Zzz‐His in particular, have been used to equip peptides and proteins with a multitude of functions based on the redox activity of Cu, including nuclease, protease, glycosidase, or oxygen activation properties, useful in anticancer or antimicrobial drugs. More recent research suggests novel biological functions, mainly based on the redox inertness of CuII in XZH, like PET imaging (with 64Cu), chelation therapies (for instance in Alzheimer's disease and other types of neurodegeneration), antioxidant units, Cu transporters and activation of biological functions by strong CuII binding. This Review gives an overview of the chemical properties of Cu‐XH and ‐XZH motifs and discusses the pros and cons of the vastly different biological applications, and how they could be improved depending on the application.

  • Synthesis, Characterization and Catalytic Activity of NHC Gold(I) Polyoxometalate Complexes

    Fatih Sirindil, Steven P. Nolan, Samuel Dagorne, Patrick Pale, Aurélien Blanc, Pierre de Frémont
    Chemistry - A European Journal, 2018, 24 (48), pp.12630-12637. ⟨10.1002/chem.201801648⟩ | Publiée le 1 janvier 2018
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    The new hybrid NHC gold(I) acetonitrile polyoxometalate complexes {[Au(IPr)(MeCN)+][H+]3[SiW12O404−] (1), [Au(IPr)(MeCN)+][H+]2[PMo12O403−] (2), [Au(IPr)(MeCN)+][H+]5[P2W18O626−] (3), [Au(IPr)(MeCN)+][H+]2[PW12O403−] (4), [Au(IPr)(MeCN)+]3[PMo12O403−] (5) and [Au(ItBu)(MeCN)+] [H+]2[PMo12O403−] (6)} were readily synthesized in high yield and characterized by NMR and MS‐ESI spectroscopy. In a preliminary catalytic study, their activity was assessed under heterogeneous conditions for the ene‐yne rearrangement reaction and a cycloisomerization reaction. Additionally, their reactivity and recyclability were tested in the hydration of alkynes under homogeneous conditions.

  • Morphine Binds Creatine Kinase B and Inhibits Its Activity

    Ivan Weinsanto, Jinane Mouheiche, Alexis Laux-Biehlmann, Francois Delalande, Arnaud Marquette, Virginie Chavant, Florian Gabel, Sarah Cianferani, Alexandre Charlet, Marie-Odile Parat, Yannick Goumon
    Frontiers in Cellular Neuroscience, 2018, 12, pp.464. ⟨10.3389/fncel.2018.00464⟩ | Publiée le 1 janvier 2018
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    Morphine is an analgesic alkaloid used to relieve severe pain, and irreversible binding of morphine to specific unknown proteins has been previously observed. In the brain, changes in the expression of energy metabolism enzymes contribute to behavioural abnormalities during chronic morphine treatment. Creatine kinase B (CK-B) is a key enzyme involved in brain energy metabolism. CK-B also corresponds to the imidazoline-binding protein I2 which binds dopamine (a precursor of morphine biosynthesis) irreversibly. Using biochemical approaches, we show that recombinant mouse CK-B possesses a µM affinity for morphine and binds to morphine in vitro. The complex formed by CK-B and morphine is resistant to detergents, reducing agents, heat treatment and SDS-polyacrylamide gel electrophoresis (SDS-PAGE). CK-B-derived peptides CK-B1-75 and CK-B184-258 were identified as two specific morphine binding-sites. In vitro, morphine (1-100 μM) significantly reduces recombinant CK-B enzymatic activity. Accordingly, in vivo morphine administration (7.5 mg/kg, i.p.) to mice significantly decreased brain extract CK-B activity compared to saline-treated animals. Together, these results show that morphine strongly binds CK-B and inhibits its activity in vitro and in vivo.

  • Ligand substitution and conformational effects on the ultrafast luminescent decay of [Re(CO) 3 (phen)(L)] + (L = imidazole, pyridine): non-adiabatic quantum dynamics

    M. Fumanal, E. Gindensperger, C. Daniel
    Physical Chemistry Chemical Physics, 2018, 20 (2), pp.1134-1141. ⟨10.1039/C7CP07540E⟩ | Publiée le 1 janvier 2018
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    The C s conformers of [Re(CO) 3 (phen)(L)] + (L = imidazole, pyridine) complexes are investigated by means of density functional theory (DFT/time-dependent DFT (TD-DFT)) electronic structure calculations and non-adiabatic quantum dynamics including spin–orbit coupling (SOC).

  • Iron and Cobalt Metallotropism in Remote-Substituted NHC Ligands: Metalation to Abnormal NHC Complexes or NHC Ring Opening

    Andreas A Danopoulos, Alexandre Massard, Gilles Frison, Pierre Braunstein
    Angewandte Chemie International Edition, 2018, 57 (44), pp.14550-14554. ⟨10.1002/anie.201808008⟩ | Publiée le 1 janvier 2018
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    Metallotropism of the M[N(SiMe3)2]2 metal fragment in the tautomeric system IAR⇌ACR involving imidazolium salts/N‐heterocyclic carbenes with remote aminide/amine substituents, respectively, is manifested by its CNHC carbophilicity (R=tBu, M=Co, Fe) or NRaminido nitrogenophilicity (R=Cy, M=Co, Fe; R=Mes, M=Fe) and has been rationalized on the basis of steric and electronic effects. The thermolysis products of the [M{N(SiMe3)2}2]/ IAR⇌ACR system are also substituent‐dependent, leading to a rearranged aminide‐functionalized aNHC Co2 complex of an unprecedented type or to ring‐opened metallaketenimines; they are postulated to originate from different metalloisomers. The results are interpreted on the basis of the X‐ray diffraction analysis of 11 new compounds.

  • Editor’s Highlight: Fragrance Allergens Linalool and Limonene Allylic Hydroperoxides in Skin Allergy: Mechanisms of Action Focusing on Transcription Factor Nrf2

    Chloé Raffalli, Elodie Clouet, Salen Kuresepi, Marie-Hélène Damiens, Jean-Pierre Lepoittevin, Marc Pallardy, Pierre-Jacques Ferret, Elena Giménez-Arnau, Saadia Kerdine-Römer
    Toxicological Sciences, 2018, 161 (1), pp.139-148. ⟨10.1093/toxsci/kfx207⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    Allergic contact dermatitis is regarded as the most frequent expression of immunotoxicity in humans. Many odorant terpenes commonly used in fragrance compositions are considered as weak skin sensitizers, whereas some of their autoxidation products, allylic hydroperoxides, are classified as strong sensitizers according to the local lymph node assay. However, the mechanism of their effects on the immune system remains unclear. Since dendritic cells play a key role in allergic contact dermatitis, we studied their activation by the frequently used linalool (LINA) and limonene (LIMO), and their respective sensitizing allylic hydroperoxides (LINA-OOH, LIMO-OOH). The THP-1 cell-line was used as a surrogate for dendritic cells, the model currently employed in the validated h-CLAT in vitro test. Our data showed that allylic hydroperoxides behave differently. Both LINA-OOH and LIMO-OOH oxidized cell surface thiols 30 min after stimulation. However, the oxidative stress induced by LINA-OOH was stronger, with a higher decreased GSH/GSSG ratio and a stronger reactive species production. Moreover, LINA-OOH induced a stronger Nrf2 accumulation in correlation with nqo1 and ho-1 gene expression, 2 Nrf2 target genes. Regarding signaling pathways involved in these effects, P38 mitogen-activated protein kinase and P-ERK were activated in response to LINA-OOH but not with LIMO-OOH. CD54 and CD86 were induced 24-h postexposure. In contrast, LINA and LIMO did not modify THP-1 phenotype. This work underlies that autoxidation forming allylic hydroperoxide (ROOH) does not lead to equal chemical reactivity since LINA-OOH appears to be a stronger activator than LIMO-OOH, in regard to oxidative stress and Nrf2 pathway activation.

  • Entwined dimer formation from self-complementary bis-acridiniums

    Henri-Pierre Jacquot de Rouville, Nathalie Zorn, Emmanuelle Leize-Wagner, Valérie Heitz
    Chemical Communications, 2018, 54 (78), pp.10966-10969. ⟨10.1039/C8CC05958F⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    The self-assembling entwined dimer of a bis-acridinium tweezer has been investigated in organic and aqueous media. Please check this proof carefully. Our staff will not read it in detail after you have returned it. Please send your corrections either as a copy of the proof PDF with electronic notes attached or as a list of corrections. Do not edit the text within the PDF or send a revised manuscript as we will not be able to apply your corrections. Corrections at this stage should be minor and not involve extensive changes. Proof corrections must be returned as a single set of corrections, approved by all co-authors. No further corrections can be made after you have submitted your proof corrections as we will publish your article online as soon as possible after they are received. Please ensure that: The spelling and format of all author names and affiliations are checked carefully. You can check how we have identified the authors' first and last names in the researcher information table on the next page. Names will be indexed and cited as shown on the proof, so these must be correct.

  • Metal-mediated linear self-assembly of porphyrins

    Jennifer A. Wytko, Romain Ruppert, Christophe Jeandon, Jean Weiss
    Chemical Communications, 2018, 54 (13), pp.1550-1558. ⟨10.1039/C7CC09650J⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    Porphyrin derivatives are highly relevant to biological processes such as light harvesting and charge separation. Their aromatic electronic structure and their accessible HOMO−LUMO gap render porphyrins highly attractive for the development of opto- and electro-active materials. Due to the often difficult covalent synthesis of multiporphyrins, self-assembly using metal complexation as the driving force can lead to well defined objects exhibiting a controlled morphology, which will be required to analyse and understand the electronic properties of porphyrin wires. This article presents two assembly approaches, namely by peripheral coordination or by binding to a metal ion in the porphyrin core, that are efficient and well designed for future developments requiring interactions with a surface.

  • First Demonstration of Magnetoelectric Coupling in a Polynuclear Molecular Nanomagnet: Single‐Crystal EPR Studies of [Fe3O(O2CPh)6(py)3]ClO4⋅py under Static Electric Fields

    Athanassios K. Boudalis, Jérôme Robert, Philippe Turek
    Chemistry - A European Journal, 2018, 24 (56), pp.14896-14900. ⟨10.1002/chem.201803038⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    Single‐crystal EPR experiments show that the highly symmetric antiferromagnetic half‐integer spin triangle [Fe3O(O2CPh)6(py)3]ClO4⋅py (1, py=pyridine) possesses a ST=1/2 ground state exhibiting high g‐anisotropy due to antisymmetric exchange (Dzyaloshinskii–Moriya) interactions. EPR experiments under static electric fields parallel to the triangle's plane (i.e., perpendicular to the magnetic z‐axis) reveal that this ground state couples to externally applied electric fields. This magnetoelectric coupling causes an increase in the intensity of the intradoublet EPR transition and does not affect its resonance position when B0∥z. The results are discussed on the basis of theoretical models correlating the spin chirality of the ground state with the magnetoelectric effect.

  • A Highly Stable Organic Radical Cation

    Mathilde Berville, Jimmy Richard, Monika Stolar, Sylvie Choua, Nolwenn Le Breton, Christophe Gourlaouen, Corinne Boudon, Laurent Ruhlmann, Thomas Baumgartner, Jennifer Wytko, Jean Weiss
    Organic Letters, 2018, 20 (24), pp.8004-8008. ⟨10.1021/acs.orglett.8b03579⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    Functionalization of a methylviologen with four methyl ester substituents significantly facilitates the first two reduction steps. The easily generated radical cation shows markedly improved air stability compared to the parent methylviologen, making this derivative of interest in organic electronic applications.

  • Vitamin D5 in Arabidopsis thaliana

    D. Silvestro, Claire Villette, Julien Delecolle, C. Olsen, M. Motawia, Philippe Geoffroy, Michel Miesch, P. Jensen, Dimitri Heintz, Hubert Schaller
    Scientific Reports, 2018, 8 (1), pp.16348-16348 | Publiée le 1 janvier 2018
    Article dans une revue

  • Synthesis of 26-methyl cholestane and identification of cryostanes in mid- Neoproterozoic sediments

    Pierre Adam, Philippe Schaeffer, Jochen J Brocks
    Organic Geochemistry, 2018, 115, pp.246-249. ⟨10.1016/j.orggeochem.2017.11.006⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    The biomarker distributions of mid-Neoproterozoic sediments (800–717 million yr, Ma) from various locations are characterized by the occurrence, besides cholestane isomers, of a novel series of C28 steranes, whereas classical C-24 alkylated steranes are absent. These unusual C28 steranes, termed cryostanes, seem to be restricted to pre-Snowball Earth sediments. We report their conclusive identification as 26-methyl cholestanes based on comparison of gas chromatographic (GC) behavior and mass spectrum of the last eluting cryostane isomer with those of a 26-methyl 5α(H),14α(H),17α(H),20R-cholestane standard obtained by way of synthesis. Sterols methylated at C-26 seem to be restricted to some demosponges and, based on molecular clock estimates, demosponges may have emerged in the time interval 800–700 Ma. A sponge origin of cryostanes is thereby conceivable, making cryostanes the oldest molecular markers for animals. However, other biological sources need to be explored, including the wide variety of eukaryotic protists.

  • Cu and Zn coordination to amyloid peptides: From fascinating chemistry to debated pathological relevance

    Elena Atrián-Blasco, Paulina Gonzalez, Alice Santoro, Bruno Alies, Peter Faller, Christelle Hureau
    Coordination Chemistry Reviews, 2018, 371, pp.38-55. ⟨10.1016/j.ccr.2018.04.007⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    Several diseases share misfolding of different peptides and proteins as a key feature for their development. This is the case of important neurodegenerative diseases such as Alzheimer’s and Parkinson’s diseases and type II diabetes mellitus. Furthermore, metal ions such as copper and zinc might play an important role upon interaction with amyloidogenic peptides and proteins, which could impact their aggregation and toxicity abilities. In this review, the different coordination modes proposed for copper and zinc with amyloid-β, α-synuclein and IAPP will be reviewed as well as their impact on the aggregation, and ROS production in the case of copper. In addition, a special focus will be given to the mutations that affect metal binding and lead to familial cases of the diseases. Different modifications of the peptides that have been observed in vivo and could be relevant for the coordination of metal ions are also described.

  • Light-Responsive Pyrazine-Based Systems Probing Aromatic Diarylethene Photocyclization

    Jovana V. Milic, Cedric Schaack, Nora Hellou, Florin Isenrich, Renana Gershoni-Poranne, Dmytro Neshchadin, Sylvain Egloff, Nils Trapp, Laurent Ruhlmann, Corinne Boudon, Georg Gescheidt, Jeanne Crassous, Francois Diederich
    Journal of Physical Chemistry C, 2018, 122 (33), pp.19100-19109. ⟨10.1021/acs.jpcc.8b05019⟩ | Publiée le 1 janvier 2018
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    Here, we present an investigation of the photocyclization of novel aromatic diarylethene (DAE) systems 1-3 based on pyrazine, quinoxaline, and helicene scaffolds. These prospective photoswitches were designed using density functional theory calculations and analyzed in solution and in the solid state by cyclic and rotating disk voltammetry, UV-vis and transient absorption spectroscopy, as well as X-ray crystallography. Additionally, nucleus-independent chemical shift calculations were performed to investigate the influence of aromaticity on the photocyclization ability. While pyrazine-2,3-diyl-extended DAE system 1 demonstrated photoswitching ability with short lifetimes of the cyclized form, the more aromatic quinoxaline analogue 2 did not feature any photocyclization. Further extension of these aromatic systems into helicene-DAE 3 resulted in the stabilization of the cyclized form through the conserved backbone aromaticity, accompanied by enhanced photochromism. This study paves the way toward the generation of aromatic DAE photoswitches for light-controlled molecular systems in the future.

  • Formation of Aqueous Biphasic Systems with an Ionic Liquid Induced by Metallic Salts: Nanoscopic Views from Molecular Dynamics Simulations

    Rachel Schurhammer, Georges Wipff
    Journal of Physical Chemistry B, 2018, 122 (44), pp.10143-10157. ⟨10.1021/acs.jpcb.8b06193⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    The formation of aqueous biphasic systems (ABSs) based on aqueous ionic liquid (IL)/salt mixtures has been investigated via molecular dynamics simulations (with IL butyl-methyl-imidazolium triflate; salts NaCl, CsCl, SrCl2, and EuCl3). The analysis of ion distributions, solvation, and mutual interactions during the dynamics reveals the heterogeneity of all solutions due to ion segregation into mutually exclusive IL and salt domains, even in monophasic solutions (“ionic sociology”). Ion segregation and ABS formation are found to increase with (i) the salt content and (ii) the IL content, (iii) in the order Na+ &lt; Sr2+ &lt; Eu3+, and (iv) when the IL ion “polarity” is diminished, following experimental trends. The structuration of the solution is rationalized as a synergistic water transfer from the best donating ion pair (first hydration shell of hydrophobic moieties of IL ions) to the best accepting pair (Mn+ and Cl– ions, beyond their first shell). In ABSs, the IL- and salt-containing phases are linked by a well-defined “interface” that decreases in width when MCln becomes more hydrophilic and/or more concentrated. In the IL-rich phase of ABSs, the hydration of IL ions and their mutual interactions are shown to be similar to those displayed at aqueous interfaces

  • Disentangling Magnetic Hardening and Molecular Spin Chain Contributions to Exchange Bias in Ferromagnet/Molecule Bilayers

    Samy Boukari, Hashim Jabbar, Filip Schleicher, Manuel Gruber, Garen Avedissian, Jacek Arabski, Victor da Costa, Guy Schmerber, Prashanth Rengasamy, Bertrand Vileno, Wolfgang Weber, Martin Bowen, Eric Beaurepaire
    Nano Letters, 2018, 18 (8), pp.4659-4663. ⟨10.1021/acs.nanolett.8b00570⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    We performed ferromagnetic resonance and magnetometry experiments to clarify the relationship between two reported magnetic exchange effects arising from interfacial spin-polarized charge transfer in ferromagnetic metal (FM)/molecule bilayers: the magnetic hardening effect and spinterface-stabilized molecular spin chains. To disentangle these effects, we tuned the metal phthalocyanine molecule central site’s magnetic moment to enhance or suppress the formation of spin chains in the molecular film. We find that both effects are distinct, and additive. In the process, we extend the list of FM/molecule candidate pairs that are known to generate magnetic exchange effects, experimentally confirm the predicted increase in anisotropy upon molecular adsorption, and show that spin chains within the molecular film can enhance magnetic exchange. Our results confirm, as an echo to progress regarding inorganic spintronic tunnelling, that spintronic tunnelling across structurally ordered organic barriers has been reached through previous magnetotransport experiments.

  • Regioselective Synthesis of Indene from 3-Aryl Propargylic gem -Dipivalates Catalyzed by N -Heterocyclic Carbene Gold(I) Complexes

    Damien Hueber, Matthieu Teci, Eric Brenner, Dominique Matt, Jean-Marc Weibel, Patrick Pale, Aurélien Blanc
    Advanced Synthesis and Catalysis, 2018, 360 (13), pp.2453-2459. ⟨10.1002/adsc.201800305⟩ | Publiée le 1 janvier 2018
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    1-Aryl-3,3-bis(pivaloyloxy)propynes can be converted in good to high yields into either 1,3-or 1,2-bis(pivaloyloxy)indenes, depending on the N-heterocyclic carbene (NHC) gold(I) hexafluoroantimonate catalyst used. Almost exclusive formation of 1,3-di(oxycarbonyl)indene derivatives was achieved with cationic gold complexes containing the embracing N,N'-1,3-bis(9-butylfluorenyl)benzimidazolylidene ligand (nBu FNHC). The regioselective issue of the reaction was rationalized by the specific spatial distribution of the steric bulk in the nBu FNHC ligand. In contrast, only modest selectivities in favor of 1,2-disubstituted indenes were observed with more classical NHC gold complexes, the best selectivity being then obtained with N,N'-1,3-bis(2,6-diisopropylphenyl)-4,5-dihydroimidazolylidene gold chloride (SIPrAuCl) as precatalyst.

  • Accurate control of the covalent functionalization of single-walled carbon nanotubes for the electro-enzymatically controlled oxidation of biomolecules

    Naoual Allali, Veronika Urbanova, Mathieu Etienne, Xavier Devaux, Martine Mallet, Brigitte Vigolo, Jean-Joseph Adjizian, Chris Ewels, Sven Öberg, Alexander Soldatov, Edward Mcrae, Yves Fort, M. Dossot, Victor Mamane
    Beilstein Journal of Nanotechnology, 2018, 9, pp.2750-2762. ⟨10.3762/bjnano.9.257⟩ | Publiée le 1 janvier 2018
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    Single-walled carbon nanotubes (SWCNTs) were functionalized by ferrocene through ethyleneglycol chains of different lengths (FcETGn) and the functionalized SWCNTs (f-SWCNTs) were characterized by different complementary analytical techniques. In particular, high-resolution scanning electron transmission microscopy (HRSTEM) and electron energy loss spectroscopy (EELS) analyses support that the outer tubes of the carbon-nanotube bundles were covalently grafted with FcETGn groups. This result confirms that the electrocatalytic effect observed during the oxidation of the reduced form of nicotinamide adenine dinucleotide (NADH) co-factor by the f-SWCNTs is due to the presence of grafted ferrocene derivatives playing the role of a mediator. This work clearly proves that residual impurities present in our SWCNT sample (below 5 wt. %) play no role in the electrocatalytic oxidation of NADH. Moreover, molecular dynamic simulations confirm the essential role of the PEG linker in the efficiency of the bioelectrochemical device in water, due to the favorable interaction between the ETG units and water molecules that prevents π-stacking of the ferrocene unit on the surface of the CNTs. This system can be applied to biosensing, as exemplified for glucose detection. The well-controlled and well-characterized functionalization of essentially clean SWCNTs enabled us to establish the maximum level of impurity content, below which the f-SWCNT intrinsic electrochemical activity is not jeopardized.

  • Oxidative stress and the amyloid beta peptide in Alzheimer’s disease

    Clémence Cheignon, M. Tomas, D. Bonnefont-Rousselot, Peter Faller, Christelle Hureau, Fabrice Collin
    Redox Biology, 2018, 14, pp.450-464. ⟨10.1016/j.redox.2017.10.014⟩ | Publiée le 1 janvier 2018
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    Oxidative stress is known to play an important role in the pathogenesis of a number of diseases. In particular, it is linked to the etiology of Alzheimer's disease (AD), an age-related neurodegenerative disease and the most common cause of dementia in the elderly. Histopathological hallmarks of AD are intracellular neurofibrillary tangles and extracellular formation of senile plaques composed of the amyloid-beta peptide (Aβ) in aggregated form along with metal-ions such as copper, iron or zinc. Redox active metal ions, as for example copper, can catalyze the production of Reactive Oxygen Species (ROS) when bound to the amyloid-β (Aβ). The ROS thus produced, in particular the hydroxyl radical which is the most reactive one, may contribute to oxidative damage on both the Aβ peptide itself and on surrounding molecule (proteins, lipids, …). This review highlights the existing link between oxidative stress and AD, and the consequences towards the Aβ peptide and surrounding molecules in terms of oxidative damage. In addition, the implication of metal ions in AD, their interaction with the Aβ peptide and redox properties leading to ROS production are discussed, along with both in vitro and in vivo oxidation of the Aβ peptide, at the molecular level.

  • The [Fe{(SePPh 2 ) 2 N} 2 ] Complex Revisited: X-ray Crystallography, Magnetometry, High-Frequency EPR, and Mössbauer Studies Reveal Its Tetrahedral Fe II Se 4 Coordination Sphere

    Eleftherios Ferentinos, Spyros Chatziefthimiou, Athanassios K Boudalis, Michael Pissas, Guinevere Mathies, Peter Gast, Edgar J J Groenen, Yiannis Sanakis, Panayotis Kyritsis
    European Journal of Inorganic Chemistry, 2018, 2018 (6), pp.713-721. ⟨10.1002/ejic.201701459⟩ | Publiée le 1 janvier 2018
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    The synthesis and characterization of a preparation of the [Fe{(SePPh 2) 2 N} 2 ] complex (1 Td) is described. X-ray crystallography shows that this system contains a tetrahedral FeSe 4 coordination sphere. The structural features of 1 Td are compared with those of similar first row transition element complexes, including a recently reported preparation of [Fe{(SePPh 2) 2 N} 2 ] (1 SP) exhibiting a highly unusual square planar FeSe 4 coordination sphere. The electronic structure of 1 Td was elucidated by magnetometry, high-frequency EPR, and Mössbauer spectroscopic studies, which reveal zero-field splitting (ZFS) parameters typical of high spin S = 2 tetrahedral Fe II sites. Accurate ZFS parameters (D = +8.22 cm −1 , E/D = 0.104) were obtained by analysis of the EPR spectra and compared with those of the analogous [Fe{(SPPh 2) 2 N} 2 ] complex. The findings of this work call for a thorough structural and physicochemical characterization of the literature 1 SP system.

  • Development of an electron paramagnetic resonance methodology for studying the photo-generation of reactive species in semiconductor nano-particle assembled films

    Marek Twardoch, Youcef Messai, Bertrand Vileno, Yannick Hoarau, Djamel E Mekki, Olivier Felix, Philippe Turek, Jean Weiss, Gero Decher, David Martel
    Molecular Physics, 2018, 116 (12), pp.1558-1564. ⟨10.1080/00268976.2018.1433882⟩ | Publiée le 1 janvier 2018
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    An experimental approach involving electron paramagnetic resonance is proposed for studying photogenerated reactive species in semiconductor nano-particle-based films deposited on the internal wall of glass capillaries. This methodology is applied here to nano-TiO2 and allows a semiquantitative analysis of the kinetic evolutions of radical production using a spin scavenger probe.

  • Definition of the mole (IUPAC Recommendation 2017)

    Roberto Marquardt, Juris Meija, Zoltán Mester, Marcy Towns, Ron Weir, Richard Davis, Jürgen Stohner
    Pure and Applied Chemistry, 2018, 90 (1), pp.175-180. ⟨10.3929/ethz-b-000237894⟩ | Publiée le 1 janvier 2018
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    In 2011 the General Conference on Weights and Measures (CGPM) noted the intention of the International Committee for Weights and Measures (CIPM) to revise the entire International System of Units (SI) by linking all seven base units to seven fundamental physical constants. Of particular interest to chemists, new definitions for the kilogram and the mole have been proposed. A recent IUPAC Technical Report discussed these new definitions in relation to immediate consequences for the chemical community. This IUPAC Recommendation on the preferred definition of the mole follows from this Technical Report. It supports a definition of the mole based on a specified number of elementary entities, in contrast to the present 1971 definition.

  • Fluorescence Commutation and Surface Photopatterning with Porphyrin Tetradithienylethene Switches

    Thomas Biellmann, Agostino Galanti, Julien Boixel, Jennifer A. Wytko, Véronique Guerchais, Paolo Samori, Jean Weiss
    Chemistry - A European Journal, 2018, 24 (7), pp.1631-1639. ⟨10.1002/chem.201704222⟩ | Publiée le 1 janvier 2018
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    Four tetradithienylethene (DTE) substituted porphyrins, the free base 1H(2), and three metal derivatives (1Zn, 1Co, 1Ni), were synthesized and studied. These dyads, for which the DTE units are connected to the porphyrin's meso positions via a meta-phenyl spacer, exhibit reversible photochromic properties in all cases, with conversion to the photostationary state (PSS) up to 88%, as confirmed by absorption and NMR spectroscopies. Compounds1H(2) and 1Zn are fluorescent in solution and display a red emission. Upon irradiation with UV light to trigger the closing of the DTEs, the fluorescence of both the free base and zinc porphyrin was very efficiently quenched in solution. The reversible, photo-switching of luminescence was retained in a tetra-DTE free-base porphyrin-doped polystyrene film, for which photo-patterning was demonstrated by confocal scanning microscopy. The tunable fluorescent properties of this multi-DTE framework render this compound of interest as a photo-rewritable fluorescent ink.

  • Synthesis and structure of two crowded trans-[PdCl2L2] complexes based on a chiral, calix[4]arene-fused phosphole

    Fethi Elaieb, David Sémeril, Claude Bauder, Dominique Matt, Lydia Karmazin-Brelot
    Polyhedron, 2018, 139, pp.172-177. ⟨10.1016/j.poly.2017.10.020⟩ | Publiée le 1 janvier 2018
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    The chiral, calix[4]arene-fused phosphole rac-1 reacts with [PdCl2(PhCN)2] to afford a mixture of two diastereomeric complexes, trans-[PdCl2{(P,R)-1}{(M,S)-1}] (2a) and trans-[PdCl2{(P,R)-1}2]/trans-[PdCl2{(M,S)-1}2] (2b), which can be separated by column chromatography. Ligand 1 contains an inherently chiral calix[4]arene skeleton (displaying either P or M helicity) as well as an inversion-stable phosphorus atom (with R or S configuration) having its lone pair located on the endo-face of the calixarene cavity. Both complexes, which equilibrate slowly in solution (2a:2b = 39:61 at equilibrium), have been isolated and characterised by single-crystal X-ray diffraction: Complex 2a: triclinic, space group , unit cell dimensions a = 11.0070(3), b = 21.9271(7), c = 23.2270(7) Å, α = 116.054(2)°, β = 95.823(2)°, γ = 92.956(2)°, Z = 2; Complex 2b: triclinic, space group , unit cell dimensions a = 14.2643(6), b = 17.3200(8), c = 22.6335(10) Å, α = 102.496(2)°, β = 103.774(2)°, γ = 95.034(2)°, Z = 2. The unit cell of 2a contains two inequivalent centrosymmetric molecules, which differ only slightly from each other. Both palladium atoms have close to a square planar environment and are sterically protected along the dz2 axis by the two bulky calixarene units, which adopt markedly pinched conformations. Each chlorine atom sits close to an equatorial H atom (Heq) of a methylenic ArCH2 group (av. Heq…Cl separation 2.88 Å). Consistent with an Heq…Cl bonding interaction, the corresponding 1H NMR signal undergoes an unusual downfield shift upon complex formation. In the solid, 2b consists of a racemic mixture of trans-[PdCl2{(P,R)-1}2] and trans-[PdCl2{(M,S)-1}2]. Similar Heq…Cl interactions to those seen in 2a are found in 2b.

  • Low valent Al(II)–Al(II) catalysts as highly active ε-caprolactone polymerization catalysts: indication of metal cooperativity through DFT studies

    Olga Kazarina, Christophe Gourlaouen, Lydia Karmazin, Alexander Morozov, Igor Fedushkin, Samuel Dagorne
    Dalton Transactions, 2018, 47 (39), pp.13800-13808. ⟨10.1039/C8DT02614A⟩ | Publiée le 1 janvier 2018
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    The present study first describes the reactivity of low valent Al(II) and Ga(II) complexes of the type (dpp-bian)M–M(dpp-bian) (1, M = Al; 2, Ga; dpp-bian2− = 1,2-bis-(2,6-iPr2-C6H3)-acenaphthenequinonediamido) with cyclic esters/carbonates such as ε-caprolactone (CL) and trimethylene carbonate (TMC). CL and TMC both readily coordinate to the Al(II) species 1 to form the corresponding bis-adducts (dpp-bian)Al(L)–(L)Al(dpp-bian) (3, L = CL; 4, L = TMC), which were structurally characterized confirming that the Al(II)–Al(II) dimetallic backbone retains its integrity in the presence of such cyclic polar substrates. In contrast, the less Lewis acidic Ga(II) analogue 2 shows no reaction in the presence of stoichiometric amounts of CL and TMC at room temperature. In combination with BnOH, the dinuclear Al(II) species 1 revealed to be an extremely active Al(II) initiator for the controlled ROP of CL at room temperature, outperforming all its Al(III) congeners reported thus far. Detailed DFT studies on the ROP mechanism are consistent with a process occurring thanks to the metallic cooperativity between the two Al(II) proximal (since directly bonded) metal centers in 1, which undoubtedly favors the ROP process through bimetallic activation and thus rationalizes the unusually high CL ROP activity at room temperature.

  • Harnessing complexity in molecular self-assembly using computer simulations

    Xiangze Zeng, Lizhe Zhu, Xiaoyan Zheng, Marco Cecchini, Xuhui Huang
    Physical Chemistry Chemical Physics, 2018, 20 (10), pp.6767-6776. ⟨10.1039/C7CP06181A⟩ | Publiée le 1 janvier 2018
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    In molecular self-assembly, hundreds of thousands of freely-diffusing molecules associate to form ordered and functional architectures in the absence of an actuator. This intriguing phenomenon plays a critical role in biology and has become a powerful tool for the fabrication of advanced nanomaterials. Due to the limited spatial and temporal resolutions of current experimental techniques, computer simulations offer a complementary strategy to explore self-assembly with atomic resolution. Here, we review recent computational studies focusing on both thermodynamic and kinetic aspects. As we shall see, thermodynamic approaches based on modeling and statistical mechanics offer initial guidelines to design nanostructures with modest computational effort. Computationally more intensive analyses based on molecular dynamics simulations and kinetic network models (KNMs) reach beyond it, opening the door to the rational design of self-assembly pathways. Current limitations of these methodologies are discussed. We anticipate that the synergistic use of thermodynamic and kinetic analyses based on computer simulations will provide an important contribution to the de novo design of self-assembly.

  • Association Between Severe Acute Contact Dermatitis Due to Nigella sativa Oil and Epidermal Apoptosis

    Olivier Gaudin, Feyrouz Toukal, Camille Hua, Nicolas Ortonne, Haudrey Assier, Arnaud Jannic, Elena Giménez-Arnau, Pierre Wolkenstein, Olivier Chosidow, Saskia Ingen-Housz-Oro
    JAMA Dermatology, 2018, 154 (9), pp.1062. ⟨10.1001/jamadermatol.2018.2120⟩ | Publiée le 1 janvier 2018
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    Importance Nigella sativa oil (NSO) is widely used for cosmetic and culinary purposes. Cases of severe acute contact dermatitis due to NSO are poorly described, with no histologic description. Objectives To describe the clinical and histologic features of severe acute contact dermatitis due to NSO and investigate the components responsible for such eruptions. Design, Setting, and Participants A case series study of 3 patients with contact dermatitis admitted to the dermatology department between August 21, 2009, and February 19, 2017, was conducted. All patients had been referred to the dermatology department for acute contact dermatitis due to NSO and had patch tests performed. Main Outcomes and Measures Clinical and histologic features of the cutaneous eruptions, length of hospital stay, chemical analysis of NSO, and results of patch tests. Results Three patients (3 women; median age, 27 years [range, 20-47 years]) were included in the case series. All patients had polymorphic skin lesions spreading beyond the area of NSO application: typical and atypical targets, patches with central blisters, erythematous or purpuric plaques with a positive Nikolsky sign mimicking Stevens-Johnson syndrome, or toxic epidermal necrolysis. Two patients had pustules. They had severe impairment, with more than 15% skin detachment and fever. The results of skin biopsies showed epidermal apoptosis characterized by vacuolar alteration of the basal layer, keratinocyte apoptosis, and a moderate perivascular infiltrate of lymphocytes in the dermis. The results of patch tests using the patients’ NSO were all positive. The results of gas chromatography combined with mass spectrometry performed on the NSO of 1 patient identified several constituent substances, mainly terpenes, thymoquinone, linoleic acid, and fatty acids. Conclusions and Relevance These cases suggest that acute contact dermatitis due to NSO may induce topically triggered epidermal apoptosis, previously described as the concept of acute syndrome of apoptotic pan epidermolysis. Thymoquinone and p-cymene may be the main agents involved in the pathophysiologic characteristics of this acute contact dermatitis. Clinicians should be aware of such severe reactions to NSO and report these cases to pharmacovigilance authorities.

  • Controlling the crystallinity and crystalline orientation of “shuttlecock” naphthalocyanine films for near-infrared optoelectronic applications

    Simon Dalgleish, Louisa Reissig, Yoshiaki Shuku, Christophe Gourlaouen, Sergio Vela Llausi, Kunio Awaga
    Journal of Materials Chemistry C, 2018, 6 (8), pp.1959-1970. ⟨10.1039/C7TC05521H⟩ | Publiée le 1 janvier 2018
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    The thin film properties of tin(II) 2,3-naphthalocyanine (SnNPc) were interrogated and various strategies for controlling the crystallinity and crystalline orientation within the films were assessed. SnNPc is shown to crystallize in the space group P21/c (Z = 4), where the molecular arrangement consists of alternating layers of concave and convex overlap, induced by the out-of-plane Sn atoms, resulting in a 3D slipped-π-stack network structure analogous to that reported for Phase I of titanyl phthalocyanine. The thin films were studied by X-ray diffraction, atomic force microscopy and absorption spectroscopy and are highly sensitive not just to the conditions during growth, but also to substrate pre- and post-deposition treatment. While the films grown at room temperature were largely amorphous, the crystallinity was enhanced with substrate temperature, with the molecules orienting in a standing molecular geometry. A thin layer of 3,4:9,10-perlenetetracarboxylic dianhydride induces a lying molecular geometry of the same polymorph as that of the single crystal, while different polymorphs are accessible through solvent vapor annealing of amorphous films. Transient photocurrent measurements showed a dramatic improvement in photodetector device bandwidth for the lying molecular geometry, which was attributed to enhanced photoconductivity along the π-stacking axis, while solvent vapor annealing could be used to tune the photosensitivity across the near-infrared region.

  • Balancing steric and electronic effects of bidentate, mixed P,N ligands to control Kumada catalyst transfer polycondensation of a sterically hindered thiophene

    Sophie Hameury, Christophe Gourlaouen, M. Sommer
    Polymer Chemistry, 2018, 9 (24), pp.3398-3405. ⟨10.1039/C8PY00452H⟩ | Publiée le 1 janvier 2018
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    The polymerization of sterically hindered thiophenes via Kumada catalyst transfer polycondensation (KCTP) has been shown to be challenging to control using catalysts with bidentate diphosphine ligands but promising with mixed P,N ligands. Herein we present a broad range of NiII and PdII complexes bearing either diphosphines or hybrid P,N ligands for catalyzing the KCTP of 2-bromo-3-(2,5-dioctylphenyl)-5-iodothiophene. Among these, catalytic activity and control over the reaction was optimized by a subtle balance of sterics and electronics of the mixed P,N ligand. The best performance was obtained with an oxazoline-based P,N ligand. Density functional theory calculations indicate that the association energies between Ni0 and the polythiophene backbone are higher for hybrid P,N ligands compared to diphosphines and highest for the oxazoline-based P,N ligand. This explains the reduced tendency for dissociation, resulting in decreased chain termination and higher conversion. This study broadens the range of available catalysts for KCTP useful for the polymerization of sterically hindered thiophene monomers.

  • Hemilabile Ruthenium(II)-(p-cymene)-N-Heterocyclic Carbene Complexes for the N-Alkylation of Amine Using the Green Hydrogen Borrowing Methodology

    Murat Kaloğlu, Nevin Gürbüz, David Sémeril, İsmail Özdemir
    European Journal of Inorganic Chemistry, 2018, 2018 (10), pp.1236-1243. ⟨10.1002/ejic.201701479⟩ | Publiée le 1 janvier 2018
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    Six ruthenium(II) complexes with the general molecular formula [RuCl2(NHC)(η 6-p-cymene)] (NHC = N-heterocyclic carbene) were synthesized by the transmetalation method from [RuCl2(η 6-pcymene)]2 and silver(I)-NHC complexes. All complexes were fully characterized by analytical and spectral (FT-IR, elemental analysis and 1 H and 13 C NMR) methods. The solid-state structure of one of the ruthenium complexes {dichloro-[1-(2-(2-ethoxyphenoxy)ethyl)-3-(3,5-dimethylbenzyl)benzimidazol-2-ylidene](p-cymene) ruthenium(II)} has been established by single-crystal X-ray diffraction study, which revealed that the ruthenium atom adopt a classical piano-stool coordination geometry. Under the optimised conditions, these ruthenium complexes were found to be efficient catalysts for N-alkylation of aniline with arylmethyl alcohols using the hydrogen borrowing strategy, which is a cost-effective and environmentally attractive reaction for the preparation of N-alkylated amines.

  • Pairing-up viologen cations and dications: a microscopic investigation of van der Waals interactions

    Christophe Gourlaouen, Sergi Vela, Sylvie Choua, Mathilde Berville, Jennifer Wytko, Jean Weiss, Vincent Robert
    Physical Chemistry Chemical Physics, 2018, 20 (44), pp.27878-27884. ⟨10.1039/C8CP04543G⟩ | Publiée le 1 janvier 2018
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    The microscopic origin of van der Waals- and magnetic-interactions in 4,4′ methyl viologen cation-based units (MV+˙ and MV2+) was inspected using wave function (variational DDCI and perturbative MP2, CASPT2) and density functional theory (DFT) calculations. The analysis deepens the comprehension of the magnetic behavior of experimental bis-viologen cyclophanes ([CYC]2(+˙)), in which the MV+˙ units are connected through alkyl linkers of different lengths. The formation of the so-called long-multicenter bonds in such radical dimers, responsible for the quenching of the magnetic response, was analyzed in [MV2]2(+˙). Dynamical correlation effects, accessible from second-order perturbation corrections, were decisive in observing a bonding regime characterized by an equilibrium distance of 3.3 Å and a 45 kJ mol−1 dissociation energy. At larger intermolecular distances, our calculations on [MV2]2(+˙) indicate that the singlet and triplet states are energetically competing (i.e. weak exchange interactions, JAB). Despite the absence of any clear bonding regime at the MP2 level, the puzzling association of two di-cations into [MV2]4+ is anticipated at 3.3 Å using weakly screened point charges (ε = 1.5) to account for the Coulomb interactions between the solvated subunits. The main conclusion is that both dispersion interactions and environment effects are required to overcome the Coulomb repulsion associated with doubly-charged species. All these data provide some complementary insights into the nature and amplitude of interactions between cation and dication units, and their relevance in various experimental manifestations.

  • Synthesis and structure of two crowded trans-[PdCl2L2] complexes based on a chiral, calix[4]arene-fused phosphole.

    Fethi Elaieb, David Sémeril, Claude Bauder, Dominique Matt, Corinne Bailly, Lydia Karmazin
    Polyhedron, 2018, 139, pp.172-177. ⟨10.1016/j.poly.2017.10.020⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    The chiral, calix[4]arene-fused phosphole I (rac-1) reacts with [PdCl2(PhCN)2] to afford a mixt. of two diastereomeric complexes, trans-[PdCl2{(P,R)-1}{(M,S)-1}] (2a) and trans-[PdCl2{(P,R)-1}2]/trans-[PdCl2{(M,S)-1}2] (2b), which can be sepd. by column chromatog. Ligand 1 contains an inherently chiral calix[4]arene skeleton (displaying either P or M helicity) as well as an inversion-stable P atom (with R or S configuration) having its lone pair located on the endo-face of the calixarene cavity. Both complexes, which equilibrate slowly in soln. (2a:2b = 39:61 at equil.), were isolated and characterized by single-crystal x-ray diffraction: Complex 2a: triclinic, space group P1̅, unit cell dimensions a 11.0070(3), b 21.9271(7), c 23.2270(7) Å, α 116.054(2), β 95.823(2), γ 92.956(2)°, Z = 2; Complex 2b: triclinic, space group P1̅, unit cell dimensions a 14.2643(6), b 17.3200(8), c 22.6335(10) Å, α 102.496(2), β 103.774(2), γ 95.034(2)°, Z = 2. The unit cell of 2a contains two inequivalent centrosym. mols., which differ only slightly from each other. Both Pd atoms have close to a square planar environment and are sterically protected along the dz2 axis by the two bulky calixarene units, which adopt markedly pinched conformations. Each Cl atom sits close to an equatorial H atom (Heq) of a methylenic ArCH2 group (av. Heq...Cl sepn. 2.88 Å). Consistent with an Heq...Cl bonding interaction, the corresponding 1H NMR signal undergoes an unusual downfield shift upon complex formation. In the solid, 2b consists of a racemic mixt. of trans-[PdCl2{(P,R)-1}2] and trans-[PdCl2{(M,S)-1}2]. Similar Heq...Cl interactions to those seen in 2a are found in 2b. [on SciFinder(R)]

  • A Chemically-Responsive Bis-Acridinium Receptor

    A. Gosset, Z. Xu, F. Maurel, L.-M. Chamoreau, S. Nowak, G. Vives, C. Perruchot, V. Heitz, H.-P. Jacquot De Rouville
    New Journal of Chemistry, 2018, 42 (6), pp.4728--4734. ⟨10.1039/C7NJ03712K⟩ | Publiée le 1 janvier 2018
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    A dicationic receptor based on two acridinium moieties linked by a triphenylene spacer was studied in solution and in the solid state. Recognition moieties, namely acridiniums, were exploited to evidence a host–guest response of the receptor with electron rich guests. Upon addition of methoxide anions, the formation of the bis-acridane form of the receptor was observed. The chemical responsiveness of the receptor to these anions inhibits its recognition properties towards π-donor guests. In addition, the reversibility of the chemical response was demonstrated under acidic conditions.

  • Interactions between H-bonded [Cu II3(μ3-OH)] triangles; a combined magnetic susceptibility and EPR study

    Logesh Mathivathanan, Athanassios K Boudalis, Philippe Turek, Michael Pissas, Yiannis Sanakis, Raphael G Raptis
    Physical Chemistry Chemical Physics, 2018, 20 (25), pp.17234-17244. ⟨10.1039/c8cp02643b⟩ | Publiée le 1 janvier 2018
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    The X-ray crystal structure of the CuII complex [Cu3(μ3-OH)(μ-pz)3(PhCOO)3]− (pz− = pyrazolato anion) shows an isosceles triangular core, further forming a hexanuclear H-bonded aggregate. Cleavage of the H-bonds in solution results in isolated trinuclear species. Analysis of variable temperature magnetic susceptibility data of a powder sample shows an antiferromagnetically-coupled Cu3-core with a doublet ground state and isotropic exchange parameters (Jave = −355 cm−1, Hiso = −JijSiSj). The fitting of magnetic data requires the inclusion of antisymmetric exchange, AE (HAE = Gij·Si × Sj) with Gz = 31.2 cm−1 and no detectable inter-Cu3 isotropic exchange. X-band EPR spectroscopy in a frozen tetrahydrofuran solution of the compound indicates isolated Cu3-species with g‖,eff = 2.25, g⊥,eff = 1.67. The small value of g⊥,eff (≪2.0) is consistent with the presence of AE in agreement with the analysis of the magnetic measurements. The parallel component exhibits a hyperfine pattern corresponding to one I = 3/2 nucleus with A‖ = 425 MHz. This implies a specific exchange coupling scheme obeying the order |J12| = |J13| < |J23| consistent with the crystallographically determined two long and one short Cu⋯Cu distances. The role of AE in modulating the hyperfine parameters in antiferromagnetic Cu3 clusters is studied. EPR spectra at X- and Q-band were performed with powder samples of the cluster at liquid helium temperatures. The spectra in both bands are consistent with two interacting Sa,b = 1/2 species in the point dipolar approximation. Fitting of the spectra reveals that each spin is characterized by g‖ = 2.24, g⊥ = 1.65 which is in agreement with an isolated Cu3 cluster in the ground state. The determined inter-spin distance of 4.4–4.5 Å is very close to the distance between the Cu(1) and Cu(1)′ sites of the two trimeric units as imposed crystallographically (4.3 Å). This constitutes further verification of the specific exchange coupling scheme within each trimer. Magnetostructural correlations previously adopted for antiferromagnetically coupled Cu3 clusters are discussed in the light of the combined magnetic measurements and EPR spectroscopy

  • Ascorbate Oxidation by Cu(Amyloid-β) Complexes: Determination of the Intrinsic Rate as a Function of Alterations in the Peptide Sequence Revealing Key Residues for Reactive Oxygen Species Production

    Elena Atrián-Blasco, Melisa del Barrio, Peter Faller, Christelle Hureau
    Analytical Chemistry, 2018, 90 (9), pp.5909-5915. ⟨10.1021/acs.analchem.8b00740⟩ | Publiée le 1 janvier 2018
    Article dans une revue

    Along with aggregation of the amyloid-β (Aβ) peptide and subsequent deposit of amyloid plaques, oxidative stress is an important feature in Alzheimer's disease. Cu bound to Aβ is able to produce Reactive Oxygen Species (ROS) by the successive reductions of molecular dioxygen and the ROS such produced contribute to oxidative stress. In vitro, ROS production parallels the ascorbate consumption, where ascorbate is the reductant that fuels the reactions. Because the affinity of Cu for Aβ is moderate compared to other biomolecules, the rate of ascorbate consumption is a combination of two contributions. The first one is due to peptide-unbound Cu and the second one to peptide-bound Cu complexes. In the present article, we aim at determining the amounts of the second contribution in the global ascorbate consumption process. It is defined as the intrinsic rate of ascorbate oxidation, which mathematically corresponds to the rate at an infinite peptide to Cu ratio, i.e. without any contribution from peptide-unbound Cu. We show that for the wild-type Cu(Aβ) complex, this value equals 10% of the value obtained for peptide-unbound Cu and that this value is strongly dependent on peptide alterations. By examination of the dependence of the intrinsic rate of ascorbate oxidation, followed by UV-Vis spectroscopy, for several altered peptides, we determine some of the key residues that influence ROS production.

  • Photoredox‐Switchable Resorcin[4]arene Cavitands: Radical Control of Molecular Gripping Machinery via Hydrogen Bonding

    Jovana Milić, Michal Zalibera, Darius Talaat, Julia Nomrowski, Nils Trapp, Laurent Ruhlmann, Corinne Boudon, Oliver Wenger, Anton Savitsky, Wolfgang Lubitz, François Diederich
    Chemistry - A European Journal, 2017, 24 (6), pp.1431-1440. ⟨10.1002/chem.201704788⟩ | Publiée le 18 décembre 2017
    Article dans une revue

    Abstract Semiquinones ( SQ ) are generated in photosynthetic organisms upon photoinduced electron transfer to quinones ( Q ). They are stabilized by hydrogen bonding (HB) with the neighboring residues, which alters the properties of the reaction center. We designed, synthesized, and investigated resorcin[4]arene cavitands inspired by this function of SQ in natural photosynthesis. Cavitands were equipped with alternating quinone and quinoxaline walls bearing hydrogen bond donor groups (HBD). Different HBD were analyzed that mimic natural amino acids, such as imidazole and indole, along with their analogues, pyrrole and pyrazole. Pyrroles were identified as the most promising candidates that enabled the cavitands to remain open in the Q state until strengthening of HB upon reduction to the paramagnetic SQ radical anion provided stabilization of the closed form. The SQ state was generated electrochemically and photochemically, whereas properties were studied by UV/Vis spectroelectrochemistry, transient absorption, and EPR spectroscopy. This study demonstrates a photoredox‐controlled conformational switch towards a new generation of molecular grippers.

  • Synthesis and Study at a Solid/Liquid Interface of Porphyrin Dimers Linked by Metal Ions

    Mary-Ambre Carvalho, Hervé Dekkiche, Lydia Karmazin, Fabien Sanchez, Bruno Vincent, Masatoshi Kanesato, Yoshihiro Kikkawa, Romain Ruppert
    Inorganic Chemistry, 2017, 56 (24), pp.15081-15090. ⟨10.1021/acs.inorgchem.7b02422⟩ | Publiée le 18 décembre 2017
    Article dans une revue

    Several porphyrin dimers linked by metal ions were prepared. One trimeric compound was also isolated and one porphyrin dimer linked by palladium(II) could be structurally characterized. In solution, the size of the new compounds was estimated by DOSY NMR techniques. These compounds all contained long aliphatic chains (O-C12H25), which were used to assemble them at a highly oriented pyrolytic graphite (HOPG)/liquid interface. The highly ordered arrays were visualized by scanning tunneling microscopy (STM).

  • Membrane perturbing activities and structural properties of the frog-skin derived peptide Esculentin-1a(1-21)NH2 and its Diastereomer Esc(1-21)-1c: Correlation with their antipseudomonal and cytotoxic activity

    Maria Rosa Loffredo, Anirban Ghosh, Nicole Harmouche, Bruno Casciaro, Vincenzo Luca, Annalisa Bortolotti, Floriana Cappiello, Lorenzo Stella, Anirban Bhunia, Burkhard Bechinger, Maria Luisa Mangoni
    Biochimica et Biophysica Acta:Biomembranes, 2017, 1859 (12), pp.2327-2339. ⟨10.1016/j.bbamem.2017.09.009⟩ | Publiée le 1 décembre 2017
    Article dans une revue

  • Vectofusin-1, a potent peptidic enhancer of viral gene transfer forms pH-dependent α-helical nanofibrils, concentrating viral particles

    Louic Vermeer, Loic Hamon, Alicia Schirer, Michel Schoup, Jérémie Cosette, Saliha Majdoul, David Pastre, Daniel Stockholm, Nathalie Holic, Petra Hellwig, Anne Galy, David Fenard, Burkhard Bechinger
    Acta Biomaterialia, 2017, 64, pp.259-268. ⟨10.1016/j.actbio.2017.10.009⟩ | Publiée le 1 décembre 2017
    Article dans une revue

    Gene transfer using lentiviral vectors has therapeutic applications spanning from monogenic and infectious diseases to cancer. Such gene therapy has to be improved by enhancing the levels of viral infection of target cells and/or reducing the amount of lentivirus for greater safety and reduced costs. Vectofusin-1, a recently developed cationic amphipathic peptide with a pronounced capacity to enhance such viral transduction, strongly promotes the entry of several retroviral pseudotypes into target cells when added to the culture medium. To clarify the molecular basis of its action the peptide was investigated on a molecular and a supramolecular level by a variety of biophysical approaches. We show that in culture medium vectofusin-1 rapidly forms complexes in the 10 nm range that further assemble into annular and extended nanofibrils. These associate with viral particles allowing them to be easily pelleted for optimal virus-cell interaction. Thioflavin T fluorescence, circular dichroism and infrared spectroscopies indicate that these fibrils have a unique α-helical structure whereas most other viral transduction enhancers form β-amyloid fibrils. A vectofusin-1 derivative (LAH2-A4) is inefficient in biological assays and does not form nanofibrils, suggesting that supramolecular assembly is essential for transduction enhancement. Our observations define vectofusin-1 as a member of a new class of α-helical enhancers of lentiviral infection. Its fibril formation is reversible which bears considerable advantages in handling the peptide in conditions well-adapted to Good Manufacturing Practices and scalable gene therapy protocols.

  • The MUSE Hubble Ultra Deep Field Survey

    Floriane Leclercq, Roland Bacon, Lutz Wisotzki, Peter Mitchell, Thibault Garel, Anne Verhamme, Joakim A Rosdahl, Takuya Hashimoto, Edmund Christian Herenz, Simon Conseil, Sebastiano Cantalupo, Hanae Inami, Thierry Contini, Johan Richard, Michael Maseda, Joop Schaye, Raffaella Anna Marino, Mohammad Akhlaghi, Jarle Brinchmann, Marcella Carollo
    Astronomy & Astrophysics - A&A, 2017, 608, pp.A8. ⟨10.1051/0004-6361/201731480⟩ | Publiée le 1 décembre 2017
    Article dans une revue

    We report the detection of extended Lyα haloes around 145 individual star-forming galaxies at redshifts 3 ≤ z ≤ 6 in the Hubble Ultra Deep Field observed with the Multi-Unit Spectroscopic Explorer (MUSE) at ESO-VLT. Our sample consists of continuum-faint (− 15 ≥ MUV ≥ −22) Lyα emitters (LAEs). Using a 2D, two-component (continuum-like and halo) decomposition of Lyα emission assuming circular exponential distributions, we measure scale lengths and luminosities of Lyα haloes. We find that 80% of our objects having reliable Lyα halo measurements show Lyα emission that is significantly more extended than the UV continuum detected by HST (by a factor ≈4 to >20). The median exponential scale length of the Lyα haloes in our sample is ≈4.5 kpc with a few haloes exceeding 10 kpc. By comparing the maximal detected extent of the Lyα emission with the predicted dark matter halo virial radii of simulated galaxies, we show that the detected Lyα emission of our selected sample of Lyα emitters probes a significant portion of the cold circum-galactic medium of these galaxies (>50% in average). This result therefore shows that there must be significant HI reservoirs in the circum-galactic medium and reinforces the idea that Lyα haloes are ubiquitous around high-redshift Lyα emitting galaxies. Our characterization of the Lyα haloes indicates that the majority of the Lyα flux comes from the halo (≈65%) and that their scale lengths seem to be linked to the UV properties of the galaxies (sizes and magnitudes). We do not observe a significant Lyα halo size evolution with redshift, although our sample for z> 5 is very small. We also explore the diversity of the Lyα line profiles in our sample and we find that the Lyα lines cover a large range of full width at half maximum (FWHM) from 118 to 512 km s-1. While the FWHM does not seem to be correlated to the Lyα scale length, most compact Lyα haloes and those that are not detected with high significance tend to have narrower Lyα profiles (<350 km s-1). Finally, we investigate the origin of the extended Lyα emission but we conclude that our data do not allow us to disentangle the possible processes, i.e. scattering from star-forming regions, fluorescence, cooling radiation from cold gas accretion, and emission from satellite galaxies.

  • Characterization of foreign materials in paraffin-embedded pathological specimens using in situ multi-elemental imaging with laser spectroscopy

    Benoit Busser, Samuel Moncayo, Florian Trichard, Vincent Bonneterre, Nicole Pinel, Frederic Pelascini, Philippe Dugourd, Jean-Luc Coll, Michel d'Incan, Julie Charles, Vincent Motto-Ros, Lucie Sancey
    Modern Pathology, 2017, 31 (3), pp.378 - 384. ⟨10.1038/modpathol.2017.152⟩ | Publiée le 17 novembre 2017
    Article dans une revue

    Pathologists typically encounter many disparate exogenous materials in clinical specimens during their routine histopathological examinations, especially within the skin, lymph nodes, and lungs. These foreign substances may be free extracellular deposits or induce several clinical abnormalities or histopathological patterns. However, pathologists almost never investigate or report the chemical nature of exogenous metals in clinical specimens due to a lack of convenient and available technologies. In this paper, a novel strategy based on laser-induced breakdown spectroscopy (LIBS) technology is evaluated for in situ multi-elemental tissue imaging. The improved procedures allow visualization of the presence of chemical elements contained within paraffin-embedded specimens of medical interest with elemental images that are stackable with conventional histology images. We selected relevant medical situations for which the associated pathology reports were limited to the presence of lymphohistiocytic and inflammatory cells containing granules (a granuloma and a pseudolymphoma) or to lymph nodes or skin tissues containing pigments or foreign substances. Exogenous elements such as aluminum, titanium, copper, and tungsten were identified and localized within the tissues. The all-optical LIBS elemental imaging instrument that we developed is fully compatible with conventional optical microscopy used for pathology analysis. When combined with routine histopathological analysis, LIBS is a versatile technology that might help pathologists establish or confirm diagnoses for a wide range of medical applications, particularly when the nature of external agents present in tissues needs to be investigated.

  • A Four‐Step Synthesis of Substituted 5,11‐Dicyano‐6,12‐diaryltetracenes with Enhanced Stability and High Fluorescence Emission

    Nicolas Kerisit, Przemyslaw Gawel, Brian Levandowski, Yun‐fang Yang, Víctor García-López, Nils Trapp, Laurent Ruhlmann, Corinne Boudon, Kendall Houk, François Diederich
    Chemistry - A European Journal, 2017, 24 (1), pp.159-168. ⟨10.1002/chem.201703903⟩ | Publiée le 15 novembre 2017
    Article dans une revue

    Abstract A four‐step synthesis of substituted 5,11‐dicyano‐6,12‐diaryltetracenes was developed, starting from readily available para ‐substituted benzophenones. The key step of this straightforward route is the complex cascade reaction between tetraaryl[3]cumulenes and tetracyanoethene (TCNE) resulting in 5,5,11,11‐tetracyano‐5,11‐dihydrotetracenes. The mechanism of this transformation was reinvestigated by means of theoretical calculations. The target tetracenes were obtained by a newly developed decyanation/aromatization reaction catalyzed by Cu I or Cu II complexes in solution, conditions compatible with a broad range of functional groups. A computational mechanistic study sheds light on this transformation. Structures of all tetracene derivatives were confirmed by X‐ray crystallography. The presented dicyanotetracene derivatives exhibit outstanding optoelectronic properties and enhanced photostability, significantly surpassing the reference rubrene (5,6,11,12‐tetraphenyltetracene).

  • The Use of Resorcinarene Cavitands in Metal-Based Catalysis

    Nallusamy Natarajan, Eric Brenner, David Sémeril, Dominique Matt, Jack Harrowfield
    European Journal of Organic Chemistry, 2017, 2017 (41), pp.6100-6113. ⟨10.1002/ejoc.201700725⟩ | Publiée le 9 novembre 2017
    Article dans une revue

    Catalytic chemistry involving coordination complexes based on resorcinarene cavitands has been little explored in comparison to the many studies concerning the use of such ligands in classical coordination chemistry or host–guest chemistry. The potential utility of resorcinarene cavitands in catalysis arises essentially from two features: (1) their ability to function as ligands suitable for metal confinement and thus to make reactions either shape selective or to enhance their rates through supramolecular assistance by the receptor subunit; (2) their ability to enforce steric interactions with a coordinated metal center and thereby favor carbon–carbon bond forming reactions. To date, limited use has been made of cavitands as platforms for the attachment of different ligating sites, in particular for the generation of multifunctional ligands giving rise to anchimeric assistance in catalytic reactions. This review is intended to show the promise that exists in this area. As generic cavitands can be easily expanded to result in large bowl-shaped structures as well as capsular containers, it may be anticipated that future work in this field will focus on the synthesis of sophisticated, metallated microreactors (possibly made water-soluble) for highly selective transformations, including polymerizations.

  • Is the R 3 Si Moiety in Metal–Silyl Complexes a Z ligand? An Answer from the Interaction Energy

    Dang Ho Binh, Milan Milovanović, Julia Puertes-Mico, Mustapha Hamdaoui, Snežana Zarić, Jean‐pierre Djukic
    Chemistry - A European Journal, 2017, 23 (67), pp.17058-17069. ⟨10.1002/chem.201703373⟩ | Publiée le 8 novembre 2017
    Article dans une revue

    Abstract The computation of metal–silyl interaction energies indicates the existence of situations in which the silyl group behaves as a Z‐type ligand according to the Green method of covalent‐bond classification. There is a scale of relative intrinsic silylicity Π , defined as the ratio of the intrinsic silyl‐to‐triflate interaction energy of a silyltriflate as a reference compound relative to the silyl‐to‐metal interaction of given complex, that can reveal in a straightforward manner the propensity of SiR 3 groups to behave chemically as metal‐bound “silylium” ions, namely, [SiR 3 ] + . Emblematic cases, either taken from the Cambridge Structural Database (CSD) or constructed for the purpose of this study, were also investigated from the viewpoints of extended transition‐state natural orbitals for chemical valence (ETS‐NOCV) and quantum theory of atoms in molecules (QTAIM) analyses. It is shown in the case of POBMUP—which is the iridium 1,3‐bis[(di‐ tert ‐butylphosphino)oxy]benzene (POCOP) complex isolated by Brookhart et al.—how slight variations of molecular charge and structure can drastically affect the relative intrinsic silylicity of the SiEt 3 group that is weakly bonded to the hydrido–iridium motif.

  • Chemistry of Mammalian Metallothioneins and their Interaction with Amyloidogenic Peptides and Proteins

    Elena Atrián-Blasco, Alice Santoro, Dean L. Pountney, Gabriele Meloni, Christelle Hureau, Peter Faller
    Chemical Society Reviews, 2017, 46 (24), pp.7683-7693. ⟨10.1039/C7CS00448F⟩ | Publiée le 8 novembre 2017
    Article dans une revue

    Cu and Zn ions are essential in most living beings. Their metabolism is critical for health and mis-metabolism can be lethal. In the last two decades, a large body of evidence has reported the role copper, zinc and iron, and oxidative stress in several neurodegenerative diseases like Alzheimer, Parkinson, Prion, etc. To what extend this mis-metabolism is causative or a consequence of these diseases is still a matter of research. In this context metallothioneins (MTs) appear to play a central gate-keeper role in controlling aberrant metal-protein interactions. MTs are small proteins that can bind high amounts of Zn(II) and Cu(I) ions in metal-cluster arrangements via their cysteines thiolates. Moreover, MTs are well known antioxidants. The present tutorial outlines the chemistry underlying the interconnection between copper(I/II) and zinc(II) coordination to amyloidogenic proteins and MTs, and their redox properties in generation and/or silencing reactive oxygen species (overproduced in oxidative stress) and other reactants. These studies have revealed the coordination chemistry involved in neurodegenerative diseases and the interactions between MTs with amyloidogenic proteins metal-complexes (like amyloid-β, α-synuclein and prion-protein). Overall, a protective role of MTs in neurodegenerative processes is emerging, serving as a foundation for exploring MTs chemistry as inspiration for therapeutic approaches.

  • Un-gating and allosteric modulation of a pentameric ligand-gated ion channel captured by molecular dynamics

    Nicolas Martin, Siddharth Malik, Nicolas Calimet, Jean-Pierre Changeux, Marco Cecchini
    PLoS Computational Biology, 2017, 13 (10), pp.e1005784. ⟨10.1371/journal.pcbi.1005784⟩ | Publiée le 25 octobre 2017
    Article dans une revue

    Pentameric ligand-gated ion channels (pLGICs) mediate intercellular communication at syn- apses through the opening of an ion pore in response to the binding of a neurotransmitter. Despite the increasing availability of high-resolution structures of pLGICs, a detailed under- standing of the functional isomerization from closed to open (gating) and back is currently missing. Here, we provide the first atomistic description of the transition from open to closed (un-gating) in the glutamate-gated chloride channel (GluCl) from Caenorhabditis Elegans. Starting with the active-state structure solved in complex with the neurotransmitter L-glutamate and the positive allosteric modulator (PAM) ivermectin, we analyze the spontaneous relaxation of the channel upon removal of ivermectin by explicit solvent/membrane Molecular Dynamics (MD) simulations. The µs-long trajectories support the conclusion that ion- channel deactivation is mediated by two distinct quaternary transitions, i.e. a global receptor twisting followed by the radial expansion (or blooming) of the extracellular domain. At variance with previous models, we show that pore closing is exclusively regulated by the global twisting, which controls the position of the β1-β2 loop relative to the M2-M3 loop at the EC/ TM domain interface. Additional simulations with L-glutamate restrained to the crystallographic binding mode and ivermectin removed indicate that the same twisting isomerization is regulated by agonist binding at the orthosteric site. These results provide a structural model for gating in pLGICs and suggest a plausible mechanism for the pharmacological action of PAMs in this neurotransmitter receptor family. The simulated un-gating converges to the X-ray structure of GluCl resting state both globally and locally, demonstrating the pre- dictive character of state-of-art MD simulations.

  • Elucidation of siRNA complexation efficiency by graphene oxide and reduced graphene oxide

    Ngoc Do Quyen Chau, Giacomo Reina, Jesus Raya, Isabella Vacchi, Cécilia Ménard-Moyon, Yuta Nishina, Alberto Bianco
    Carbon, 2017, 122, pp.643-652. ⟨10.1016/j.carbon.2017.07.016⟩ | Publiée le 1 octobre 2017
    Article dans une revue

    Gene therapy has attracted tremendous attention as a promising method for the treatment of many diseases. Graphene oxide (GO), the oxidized form of graphene, is showing lot of potential in this field. Indeed, the polar GO oxygenated functional groups make this material highly hydrophilic, leading to a good dispersibility in water. Until now, the interaction of small interference RNA (siRNA) with graphene materials has not been elucidated. The main goal of this work was to develop a novel platform to complex siRNA molecules and to rationalize the supramolecular interactions between GO surface and the double strand RNA. Our study focused first on green and facile methods such as hydrothermal or vitamin C treatments to prepare graphene oxides at various percentage of oxygen. Epoxidation was also explored to reintroduce epoxide groups on reduced GO for further functionalization. Subsequently, we performed the covalent functionalization of GO with triethyleneglycoldiamine (TEG) and with low molecular weight polyethyleneimine (PEI) via the epoxy ring opening reaction. Finally, by gel electrophoresis, we were able to correlate the GO complexation ability with the graphene surface chemistry. In addition, ozonated GO functionalized with PEI showed a high complexing capacity for siRNA, proving to be a promising candidate for gene silencing.

  • Luminescence Mechanochromism Induced by Cluster Isomerization

    Brendan Huitorel, Hani El Moll, Marie Cordier, Alexandre Fargues, Alain Garcia, Florian Massuyeau, Charlotte Martineau-Corcos, Thierry Gacoin, Sandrine Perruchas
    Inorganic Chemistry, 2017, 56 (20), pp.12379 - 12388. ⟨10.1021/acs.inorgchem.7b01870⟩ | Publiée le 25 septembre 2017
    Article dans une revue

    Luminescent mechanochromic materials exhibiting reversible changes of their emissive properties in response to external mechanical forces are currently emerging as an important class of stimuli-responsive materials because of promising technological applications. Here, we report on the luminescence mechanochromic properties of a [Cu4I4(PPh3)4] copper iodide cluster presenting a chair geometry, being an isomer of the most common cubane form. This molecular cluster formulated [Cu4I4(PPh3)4]·2CHCl3 (1) exhibits a highly contrasted emission response to manual grinding, and, interestingly, the optical properties of the ground phase present striking similarities with those of the cubane isomer. In order to understand the underlying mechanism, a comparison with two related compounds has been conducted. The first one is a pseudopolymorph of 1 formulated as [Cu4I4(PPh3)4]·CH2Cl2 (2), which exhibits luminescent mechanochromic properties as well. The other one is also a chair compound but with a slightly different phosphine ligand, namely, [Cu4I4(PPh2C6H4CO2H)4] (3), lacking mechanochromic properties. Structural and optical characterizations of the clusters have been analyzed in light of previous electronic structure calculations. The results suggest an unpreceded mechanochromism phenomenon based on a solid-state chair → cubane isomer conversion. This study shows that polynuclear copper iodide compounds are particularly relevant for the development of luminescent mechanochromic materials.

  • Trans-C versus Cis-C thermally induced isomerisation of a terpyridine adduct of cytotoxic cycloruthenated compound

    Moussa Ali, Adel Hamada, Houda Habbita, Jennifer Weckbach, Christophe Orvain, Christian Gaiddon, Michel Pfeffer
    Journal of Organometallic Chemistry, 2017, 845, pp.206-212. ⟨10.1016/j.jorganchem.2017.05.022⟩ | Publiée le 1 septembre 2017
    Article dans une revue

    Two novel cycloruthenated compounds, 2 and 3, derived from cycloruthenated 2-phenyl pyridine(Ru(PhPy)) have been synthesized by adding one equivalent of 2,20;60,200-terpyridine (terpy) to [Ru(2-C6H4-20-C5H4N-kC,N)(MeCN)4]PF6 in MeOH/MeCN (16:1) at reflux temperature as a mixture of 1:1 isomers. The structures of both compounds that were formed under kinetic and thermodynamic control respectively, differ by the position of the central pyridine unit of terpy that was found trans or cis to the C-Ru bond of the Ru(PhPy) unit for 2 and 3 respectively. Whereas 2 did not afford substitution reactions when treated with any ligand, the substitution by MeOH or H2O of the MeCN trans to C in 3 could be followed by UV-vis spectroscopy. Moreover, the reaction in MeOH between 3 and imidazoles afforded new cycloruthenated compounds, 6a and 6b whose cytotoxicities, together with that of 2 and 3, against HCT116 and AGS cancer cells were determined.

  • Diffusion MRI microstructure models with in vivo human brain Connectom data: results from a multi-group comparison

    Uran Ferizi, Benoit Scherrer, Torben Schneider, Mohammad Alipoor, Odin Eufracio, Rutger H.J. Fick, Rachid Deriche, Markus Nilsson, Ana K. Loya-Olivas, Mariano Rivera, Dirk H.J. Poot, Alonso Ramirez-Manzanares, Jose L. Marroquin, Ariel Rokem, Christian Pötter, Robert F. Dougherty, Ken Sakaie, Claudia Wheeler-Kingshott, Simon K. Warfield, Thomas Witzel, Lawrence L. Wald, José G. Raya, Daniel C. Alexander
    NMR in Biomedicine, 2017, 30 (9), ⟨10.1002/nbm.3734⟩ | Publiée le 1 septembre 2017
    Article dans une revue

    A large number of mathematical models have been proposed to describe the measured signal in diffusion-weighted (DW) magnetic resonance imaging (MRI). However, model comparison to date focuses only on specific subclasses, and little or no information is available in the literature on how performance varies among the different types of models. To address this deficiency we organized the " White Matter Modeling Challenge " during the International Symposium on Biomedical Imaging (ISBI) 2015 conference. This competition aimed to compare a range of different kinds of model in their ability to explain measured in vivo DW human brain data. We focus specifically on the challenge of explaining a large range of measurable data. We used the Connectome scanner at the Massachusetts General Hospital, using gradients strengths of up to 300 mT/m and a broad set of diffusion times. We focused on assessing the DW signal prediction in two regions: the genu in the corpus callosum, where the fibres are relatively straight and parallel, and the fornix, where the configuration of fibres is more complex. The challenge participants had access to three-quarters of the dataset, and their models were ranked on their ability to predict the remaining unseen quarter of the data. The challenge provided a unique opportunity for quantitative comparison of a diverse set of methods from multiple groups worldwide. The comparison of the challenge entries reveals important trends and conclusions that influence the next generation of diffusion-based quantitative MRI techniques. The first is that signal models do not necessarily outperform tissue models; in fact tissue models on average rank highest of those tested. The second is that assuming a non-Gaussian (rather than a purely Gaussian) noise model provides little benefit. The third is that preprocessing the training data (here, omitting signal outliers) and using signal predicting strategies, such as bootstrapping or cross-validation, could benefit the model fitting. The analysis in this study provides a benchmark for other models and the data remains available to build up a more complete comparison over future years.

  • Tritopic NHC Precursors: Unusual Nickel Reactivity and Ethylene Insertion into a C(sp 3 )–H Bond

    Xiaoyu Ren, Christophe Gourlaouen, Marcel Wesolek, Pierre Braunstein
    Angewandte Chemie International Edition, 2017, 56 (41), pp.12557-12560. ⟨10.1002/anie.201706581⟩ | Publiée le 31 août 2017
    Article dans une revue

    Abstract The imidazolium chloride [C 3 H 3 N(C 3 H 6 NMe 2 )N{C(Me)(=NDipp)}]Cl ( 1 ; Dipp=2,6‐diisopropyl phenyl), a potential precursor to a tritopic N imine C NHC N amine pincer‐type ligand, reacted with [Ni(cod) 2 ] to give the Ni I ‐Ni I complex 2 , which contains a rare cod‐derived η 3 ‐allyl‐type bridging ligand. The implied intermediate formation of a nickel hydride through oxidative addition of the imidazolium C−H bond did not occur with the symmetrical imidazolium chloride [C 3 H 3 N 2 {C(Me)(=NDipp)} 2 ]Cl ( 3 ). Instead, a Ni−C(sp 3 ) bond was formed, leading to the neutral N imine CHN imine pincer‐type complex Ni[C 3 H 3 N 2 {C(Me)(=NDipp)} 2 ]Cl ( 4 ). Theoretical studies showed that this highly unusual feature in nickel NHC chemistry is due to steric constraints induced by the N substituents, which prevent Ni−H bond formation. Remarkably, ethylene inserted into the C(sp 3 )−H bond of 4 without nickel hydride formation, thus suggesting new pathways for the alkylation of non‐activated C−H bonds.

  • The histidine-rich peptide LAH4-L1 strongly promotes PAMAM-mediated transfection at low nitrogen to phosphorus ratios in the presence of serum

    Nan Liu, Burkhard Bechinger, Regine Süss
    Scientific Reports, 2017, 7 (1), pp.9585. ⟨10.1038/s41598-017-10049-y⟩ | Publiée le 29 août 2017
    Article dans une revue

    Abstract Non-viral vectors are widely used and investigated for the delivery of genetic material into cells. However, gene delivery barriers like lysosomal degradation, serum inhibition and transient gene expression so far still limit their clinical applications. Aiming to overcome these limitations, a pH-sensitive hybrid gene vector (PSL complex) was designed by self-assembly of poly(amidoamine) (PAMAM) dendrimers, the histidine-rich peptide LAH4-L1 and the sleeping beauty transposon system (SB transposon system, a plasmid system capable of efficient and precise genomic insertion). Transfection studies revealed that PSL complexes achieved excellent efficiency in all investigated cell lines (higher than 90% in HeLa cells and over 30% in MDCK cells, a difficult-to-transfect cell line). Additionally, the PSL complexes showed high serum tolerance and exhibited outstanding transfection efficiency even in medium containing 50% serum (higher than 90% in HeLa cells). Moreover, a high level of long-term gene expression (over 30% in HeLa cells) was observed. Furthermore, PSL complexes not only resulted in high endocytosis, but also showed enhanced ability of endosomal escape compared to PAMAM/DNA complexes. These results demonstrate that simple association of PAMAM dendrimers, LAH4-L1 peptides and the SB transposon system by self-assembly is a general and promising strategy for efficient and safe gene delivery.

  • A Direct One-Pot Synthesis of Asymmetric Dehydrobenzopyrido[12]annulenes and Their Physicochemical Properties

    Paul Baxter, Lydia Karmazin, André de Cian, Alexandre Varnek, Jean Paul Gisselbrecht, Jean Marc Strub, Sarah Cianférani
    European Journal of Organic Chemistry, 2017, 2017 (31), pp.4625-4632. ⟨10.1002/ejoc.201700700⟩ | Publiée le 23 août 2017
    Article dans une revue

    A direct one‐pot synthesis of asymmetric dehydrobenzopyrido[12]annulenes 2 and 3 containing one or two pyridine rings is reported that employs a Stephens–Castro mediated cross‐coupling of mixtures of ethynylcuprate precursors. The spectroscopic and theoretical properties of 2 and 3 are compared to those of the threefold symmetric dehydrotribenzo[12]annulene 1, and dehydrotripyrido[12]annulenes 4 and 5 and dehydrodibenzodipyrido[16]annulene byproduct 6, and showed 1–5 to be essentially isoelectronic band gap materials whose electron accepting ability increases with increasing nitrogen incorporation. The structures of 2, 4 and 6 were also unambiguously characterized by X‐ray crystallography. The results highlight the potential dehydroaryl[12]annulenes incorporating pyridines offer for the construction of high carbon content electronic materials.

  • Control of Surface-Localized, Enzyme-Assisted Self-Assembly of Peptides through Catalyzed Oligomerization

    Cécile Vigier-Carrière, Déborah Wagner, Alain Chaumont, Baptiste Durr, Paolo Lupattelli, Christophe Lambour, Marc Schmutz, Joseph Hemmerlé, Bernard Senger, Pierre Schaaf, Fouzia Boulmedais, Loïc Jierry
    Langmuir, 2017, 33 (33), pp.8267-8276. ⟨10.1021/acs.langmuir.7b01532⟩ | Publiée le 10 août 2017
    Article dans une revue

    Localized self-assembly allowing both spatial and temporal control over the assembly process is essential in many biological systems. This can be achieved through localized enzyme-assisted self-assembly (LEASA), also called enzyme-instructed self-assembly, where enzymes present on a substrate catalyze a reaction that transforms noninteracting species into self-assembling ones. Very few LEASA systems have been reported so far, and the control of the self-assembly process through the surface properties represents one essential step toward their use, for example, in artificial cell mimicry. Here, we describe a new type of LEASA system based on α-chymotrypsin adsorbed on a surface, which catalyzes the production of (KL)nOEt oligopeptides from a KLOEt (K: lysine; L: leucine; OEt ethyl ester) solution. When a critical concentration of the formed oligopeptides is reached near the surface, they self-assemble into β-sheets resulting in a fibrillar network localized at the interface that can extend over several micrometers. One significant feature of this process is the existence of a lag time before the self-assembly process starts. We investigate, in particular, the effect of the α-chymotrypsin surface density and KLOEt concentration on the self-assembly kinetics. We find that the lag time can be finely tuned through the surface density in α-chymotrypsin and KLOEt concentration. For a given surface enzyme concentration, a critical KLOEt concentration exists below which no self-assembly takes place. This concentration increases when the surface density in enzyme decreases.

  • Predictive cartography of metal binders using generative topographic mapping

    Igor Baskin, Vitaly Solovyev, Alexander A. Bagatur'Yants, Alexandre Varnek
    Journal of Computer-Aided Molecular Design, 2017, 31 (8), pp.701-714. ⟨10.1007/s10822-017-0033-6⟩ | Publiée le 7 août 2017
    Article dans une revue

    Generative topographic mapping (GTM) approach is used to visualize the chemical space of organic molecules (L) with respect to binding a wide range of 41 different metal cations (M) and also to build predictive models for stability constants (logK) of 1:1 (M:L) complexes using “density maps,” “activity landscapes,” and “selectivity landscapes” techniques. A two-dimensional map describing the entire set of 2962 metal binders reveals the selectivity and promiscuity zones with respect to individual metals or groups of metals with similar chemical properties (lanthanides, transition metals, etc). The GTM-based global (for entire set) and local (for selected subsets) models demonstrate a good predictive performance in the cross-validation procedure. It is also shown that the data likelihood could be used as a definition of the applicability domain of GTM-based models. Thus, the GTM approach represents an efficient tool for the predictive cartography of metal binders, which can both visualize their chemical space and predict the affinity profile of metals for new ligands.

  • Dithiafulvenyl-Extended N -Heterotriangulenes and Their Interaction with C 60 : Cooperative Fluorescence

    Bettina D. Gliemann, Jakob F. Hitzenberger, Pavlo O. Dral, Frank Hampel, Jean Paul Gisselbrecht, Thomas Drewello, Walter Thiel, Dirk M. Guldi, Milan Kivala
    Chemistry - A European Journal, 2017, 23 (50), pp.12353-12362. ⟨10.1002/chem.201701625⟩ | Publiée le 1 août 2017
    Article dans une revue

    We describe the synthesis as well as the electronic and photophysical characterization of novel N-heterotriangulene derivatives decorated with methoxycarbonyl- and methyl-sulfanyl-substituted dithiafulvenyl moieties. The association of these electron-rich compounds with fullerene C60 as electron acceptor was investigated by means of photophysical, voltammetric, and mass spectrometric methods and rationalized by DFT calculations. Importantly, light-induced interactions between the dithiafulvene-substituted N-heterotriangulene bearing methoxycarbonyl substituents with C60 leads to cooperative fluorescence. Quantitative Job plot analyses by means of fluorescence spectroscopy and voltammetry confirm a 1:1 association with binding constants in the order of 104 m−1. Supportive results for the supramolecular assembly of both N-heterotriangulenes with C60 were obtained by ESI mass spectrometric investigations in the gas phase.

  • Sensitivity enhancement by multiple-contact cross-polarization under magic-angle spinning

    Jesus Raya, Jerome Hirschinger
    Journal of Magnetic Resonance, 2017, 281, pp.253-271. ⟨10.1016/j.jmr.2017.06.011⟩ | Publiée le 1 août 2017
    Article dans une revue

    Multiple-contact cross-polarization (MC-CP) is applied to a powder samples of ferrocene and L-alanine under magic-angle spinning (MAS) conditions. The method is described analytically through the density matrix formalism. The combination of a two-step memory function approach and the Anderson-Weiss approximation is found to be particularly useful to derive approximate analytical solutions for single-contact Hartmann-Hahn CP (HHCP) and MC-CP dynamics under MAS. We show that the MC-CP sequence requiring no pulse-shape optimization yields higher polarizations at short contact times than optimized adiabatic passage through the HH condition CP (APHH-CP) when the MAS frequency is comparable to the heteronuclear dipolar coupling, i.e., when APHH-CP through a single sideband matching condition is impossible or difficult to perform. It is also shown that the MC-CP sideband HH conditions are generally much broader than for single-contact HHCP and that efficient polarization transfer at the centerband HH condition can be reintroduced by rotor-asynchronous multiple equilibrations-re-equilibrations with the proton spin bath. Boundary conditions for the successful use of the MC-CP experiment when relying on spin-lattice relaxation for repolarization are also examined.

  • Raman and infrared spectroscopic evidence for the structural changes of the 2Fe 2S cluster and its environment during the interaction of adrenodoxin and adrenodoxin reductase

    Mireille Khalil, Rita Bernhardt, Petra Hellwig
    Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy [1994-..], 2017, 183, pp.298-305. ⟨10.1016/j.saa.2017.04.064⟩ | Publiée le 1 août 2017
    Article dans une revue

    Many biological functions involve the formation of protein-protein complexes. In the present study, we investigated the interaction of two proteins involved in electron transfer, adrenodoxin (Adx) and adrenodoxin reductase (AdR) by using Raman and infrared spectroscopies. Different shifts and splittings of the Fesingle bondSb/t stretching vibrational modes upon interaction of the two proteins can be reported pointing towards major structural changes in the [2Fesingle bond2S] cluster. These changes may be necessary for optimizing electron transfer. The assignment of the shifted modes to the [2Fesingle bond2S] cluster was confirmed by 54Fe labeling of the truncated Adx (4–108) as well as the investigation of mutants close to the interaction site and in the vicinity of the [2Fesingle bond2S] cluster. Electrochemically induced FTIR difference spectra revealed that the flavin cofactor in AdR also changes due to the interaction with [2Fesingle bond2S] cluster in the Adx/AdR electron transfer complex.

  • Dynamic Nuclear Polarization/Solid‐State NMR Spectroscopy of Membrane Polypeptides: Free‐Radical Optimization for Matrix‐Free Lipid Bilayer Samples

    Evgeniy Salnikov, Sébastien Abel, Ganesan Karthikeyan, Hakim Karoui, Fabien Aussenac, Paul Tordo, Olivier Ouari, Burkhard Bechinger
    ChemPhysChem, 2017, 18 (15), pp.2103-2113. ⟨10.1002/cphc.201700389⟩ | Publiée le 30 juin 2017
    Article dans une revue

    Abstract Dynamic nuclear polarization (DNP) boosts the sensitivity of NMR spectroscopy by orders of magnitude and makes investigations previously out of scope possible. For magic‐angle‐spinning (MAS) solid‐state NMR spectroscopy studies, the samples are typically mixed with biradicals dissolved in a glass‐forming solvent and are investigated at cryotemperatures. Herein, we present new biradical polarizing agents developed for matrix‐free samples such as supported lipid bilayers, which are systems widely used for the investigation of membrane polypeptides of high biomedical importance. A series of 11 biradicals with different structures, geometries, and physicochemical properties were comprehensively tested for DNP performance in lipid bilayers, some of them developed specifically for DNP investigations of membranes. The membrane‐anchored biradicals PyPol–C16, AMUPOL–cholesterol, and bTurea–C16 were found to exhibit improved g‐tensor alignment, inter‐radical distance, and dispersion. Consequently, these biradicals show the highest signal enhancement factors so far obtained for matrix‐free membranes or other matrix‐free samples and may potentially shorten NMR acquisition times by three orders of magnitude. Furthermore, the optimal biradical‐to‐lipid ratio, sample deuteration, and membrane lipid composition were determined under static and MAS conditions. To rationalize biradical performance better, DNP enhancement was measured by using the 13 C and 15 N signals of lipids and a peptide as a function of the biradical concentration, DNP build‐up time, resonance line width, quenching effect, microwave power, and MAS frequency.

  • A critical review of the proposed definitions of fundamental chemical quantities and their impact on chemical communities (IUPAC Technical Report)

    Roberto Marquardt, Juris Meija, Zoltan Mester, Marcy Towns, Ron Weir, Richard Davis, Jürgen Stohner
    Pure and Applied Chemistry, 2017, 89 (7), pp.951 - 981. ⟨10.1515/pac-2016-0808⟩ | Publiée le 13 juin 2017
    Article dans une revue

    In the proposed new SI, the kilogram will be redefined in terms of the Planck constant and the mole will be redefined in terms of the Avogadro constant. These redefinitions will have some consequences for measurements in chemistry. The goal of the Mole Project (IUPAC Project Number 2013-048-1-100) was to compile published work related to the definition of the quantity ‘amount of substance’, its unit the ‘mole’, and the consequence of these definitions on the unit of the quantity mass, the kilogram. The published work has been reviewed critically with the aim of assembling all possible aspects in order to enable IUPAC to judge the adequateness of the existing definitions or new proposals. Compilation and critical review relies on the broadest spectrum of interested IUPAC members.

  • Similarities and differences of copper and zinc cations binding to biologically relevant peptides studied by vibrational spectroscopies

    Alicia Schirer, Youssef El Khoury, Peter Faller, Petra Hellwig
    Journal of Biological Inorganic Chemistry, 2017, 22 (4), pp.581-589. ⟨10.1007/s00775-017-1449-0⟩ | Publiée le 1 juin 2017
    Article dans une revue

    GHK and DAHK are biological peptides that bind both copper and zinc cations. Here we used infrared and Raman spectroscopies to study the coordination modes of both copper and zinc ions, at pH 6.8 and 8.9, correlating the data with the crystal structures that are only available for the copper-bound form. We found that Cu(II) binds to deprotonated backbone (amidate), the N-terminus and Nπ of the histidine side chain, in both GHK and DAHK, at pH 6.8 and 8.9. The data for the coordination of zinc at pH 6.8 points to two conformers including both nitrogens of a histidine residue. At pH 8.9, vibrational spectra of the ZnGHK complexes show that equilibria between monomers, oligomers exist, where deprotonated histidine residues as well as deprotonated amide nitrogen are involved in the coordination. A common feature is found: zinc cations coordinate to Nτ and/or Nπ of the His leading to the formation of GHK and DAHK multimers. In contrast, Cu(II) binds His via Nπ regardless of the peptide, in a pH-independent manner.

  • CuAAC in a Distal Pocket: Metal Active-Template Synthesis of Strapped-Porphyrin [2]Rotaxanes

    Yuta Miyazaki, Christophe Kahlfuss, Ayumu Ogawa, Takashi Matsumoto, Jennifer A Wytko, Koji Oohora, Takashi Hayashi, Jean Weiss
    Chemistry - A European Journal, 2017 | Publiée le 1 juin 2017
    Article dans une revue

    The synthesis of a porphyrin rotaxane by dipolar cycloaddition takes advantage of the ditopic character of a phenanthroline-strapped porphyrin. The success of the click reaction was conditioned by the presence of both a coordinatively unsaturated metal in the porphyrin and a copper(I) bound to the phenanthroline, pointing at a new “tandem active metal template” mechanism.

  • Changes in molecular film metallicity with minor modifications of the constitutive quinonoid zwitterions

    Lucie Routaboul, Iori Tanabe, Juan Colon Santana, Minghui Yuan, Alessio Ghisolfi, William Serrano Garcia, Peter A. Dowben, Bernard Doudin, Pierre Braunstein
    RSC Advances, 2017, 7 (35), pp.21906-21917. ⟨10.1039/C7RA01597F⟩ | Publiée le 20 avril 2017
    Article dans une revue

    Molecular films of quinonoid zwitterions, of the general formula C6H2([horiz bar, triple dot above]O)2([horiz bar, triple dot above]NHR)2, have been shown to display electronic properties highly dependent on the nature of the N-substituent R when deposited on gold substrates. The different spacing and organization of the molecules can lead to molecular films with semi-metal or dielectric behavior. With the long term goal to establish how packing effects in the solid state correlate with properties as thin films, we first attempted to identify by X-ray diffraction analysis candidate molecules showing suitable packing arrangements in the crystalline state. To this end, we have prepared a series of new functionalized, enantiopure or sterically-hindered quinonoid zwitterions and established the crystal structure of those with R = CH2–CH2–Ph (6), CH2–CH2–CH2–Ph (7), CH2–CH2–CH2–CH2–Ph (8), CH2–CH2–CH(Ph)–Ph (9), CH(CH3)–Ph (12), CH(CH2–CH3)–Ph (13), CH2–((4–CH3)–C6H4) (15), CH2–((4–NH2)–C6H4) (19) and CH2–CH2–((3,4–(OCH3)2)–C6H3) (24). An analysis of the crystal packing of three molecules, 5, 13 and 15, selected as illustrative examples for comparisons, was carried out and it was unexpectedly found that these chemically very similar molecules gave rise to different packing in the bulk, with resulting thin films showing different electronic properties. Various methods have been used for the characterization of the films, such as synchrotron radiation-based FTIR spatial spectra-microscopy, which provided an anchoring map of zwitterion 15 on a patterned substrate (Au/SiO2) showing its selective anchoring on gold. This is one of the best examples of preferential anchoring of a zwitterion and the sole example of spatial localization for a quinonoid zwitterion thin film. We have also used combined photoemission and inverse photoemission spectra and the data were compared to occupied and unoccupied DFT density state calculations.

  • Porphyrin Donor and Tunable Push–Pull Acceptor Conjugates—Experimental Investigation of Marcus Theory

    Tristan Reekie, Michael Sekita, Lorenz Urner, Stefan Bauroth, Laurent Ruhlmann, Jean-Paul Gisselbrecht, Corinne Boudon, Nils Trapp, Timothy Clark, Dirk Guldi, François Diederich
    Chemistry - A European Journal, 2017, 23 (26), pp.6357-6369. ⟨10.1002/chem.201700043⟩ | Publiée le 7 avril 2017
    Article dans une revue

    Abstract We report on a series of electron donor–acceptor conjugates incorporating a Zn II –porphyrin‐based electron donor and a variety of non‐conjugated rigid linkers connecting to push–pull chromophores as electron acceptors. The electron acceptors comprize multicyanobutadienes or extended tetracyanoquinodimethane analogues with first reduction potentials ranging from −1.67 to −0.23 V vs. Fc + /Fc in CH 2 Cl 2 , which are accessible through a final‐step cycloaddition–retroelectrocyclization (CA‐RE) reaction. Characterization of the conjugates includes electrochemistry, spectroelectrochemistry, DFT calculations, and photophysical measurements in a range of solvents. The collected data allows for the construction of multiple Marcus curves that consider electron‐acceptor strength, linker length, and solvent, with data points extending well into the inverted region. The enhancement of electron–vibration couplings, resulting from the rigid spacers and, in particular, multicyano‐groups in the conformationally highly fixed push–pull acceptor chromophores affects the charge‐recombination kinetics in the inverted region drastically.

  • The Fate of Cycloruthenated Compounds: From C-H Activation to Innovative Anticancer Therapy

    Christian Gaiddon, Michel Pfeffer
    European Journal of Inorganic Chemistry, 2017, 2017 (12), pp.1639-1654. ⟨10.1002/ejic.201601216⟩ | Publiée le 27 mars 2017
    Article dans une revue

    Among the various applications of metal-based compounds, those that involve catalytic properties and biological activity have been the goals of quests by many research teams throughout the world. We mainly concentrate in this short review article on the anticancer properties of a certain class of organometallic ruthenium compounds: the cyclometalated derivatives that have been studied in the last decade. We emphasize the apparent contradiction between the known reactivity of the carbon–metal bonds in these species towards nucleophilic and electrophilic reagents and the fact that these bonds most probably survive the harsh reaction conditions that exist in most of the catalytic media and probably also in the biologic media. We focus on the mechanisms of action of the cycloruthenated molecules in terms of their anticancer properties and thus reveal some of the most recent findings on the potential modes of action of these compounds in cancer cells, which open new therapeutic perspectives.

  • Comparative Study of the Synthesis and Structural and Physicochemical Properties of Diketopiperazines vs Aza-diketopiperazines

    Pierre Regenass, Damien Bosc, Stéphanie Riché, Patrick Gizzi, Marcel Hibert, Lydia Karmazin, A. Ganesan, Dominique Bonnet
    Journal of Organic Chemistry, 2017, 82 (6), pp.3239-3244. ⟨10.1021/acs.joc.6b02895⟩ | Publiée le 17 mars 2017
    Article dans une revue

    Aza-diketopiperazines (aza-DKPs) represent an underprivileged motif obtained by scaffold hopping of 2,5-diketopiperazines (2,5-DKPs). Herein, we compare the synthesis and the structural and physicochemical properties of aza-DKP 4 vs 2,5-DKP 7. Thus, X-ray and 1H NMR studies show that aza-DKP 4 is a rigid and nonflat scaffold like the 2,5-DKP 7. Moreover, the replacement of one Cα-stereogenic center by a nitrogen atom results in a significant improvement of both the water solubility and the microsomal stability.

  • Structure and membrane interactions of the homodimeric antibiotic peptide homotarsinin

    Rodrigo M Verly, Jarbas M Resende, Eduardo F C Junior, Mariana T Q de Magalhães, Carlos F C R Guimarães, Victor H O Munhoz, Marcelo Porto Bemquerer, Fábio C L Almeida, Marcelo M Santoro, Dorila Piló-Veloso, Burkhard Bechinger
    Scientific Reports, 2017, 7 (1), pp.40854. ⟨10.1038/srep40854⟩ | Publiée le 19 janvier 2017
    Article dans une revue

    <div><p>Antimicrobial peptides (AMPs) from amphibian skin are valuable template structures to find new treatments against bacterial infections. This work describes for the first time the structure and membrane interactions of a homodimeric AMP. Homotarsinin, which was found in Phyllomedusa tarsius anurans, consists of two identical cystine-linked polypeptide chains each of 24 amino acid residues. The high-resolution structures of the monomeric and dimeric peptides were determined in aqueous buffers. The dimer exhibits a tightly packed coiled coil three-dimensional structure, keeping the hydrophobic residues screened from the aqueous environment. An overall cationic surface of the dimer assures enhanced interactions with negatively charged membranes. An extensive set of biophysical data allowed us to establish structure-function correlations with antimicrobial assays against Gram-positive and Gram-negative bacteria. Although both peptides present considerable antimicrobial activity, the dimer is significantly more effective in both antibacterial and membrane biophysical assays.</p></div>

  • Catalytic Behaviour of Calixarenylphosphanes in Nickel‐Catalysed Suzuki–Miyaura Cross‐Coupling

    Laure Monnereau, David Sémeril, Dominique Matt, Christophe Gourlaouen
    European Journal of Inorganic Chemistry, 2017, 2017 (3), pp.581-586. ⟨10.1002/ejic.201601351⟩ | Publiée le 18 janvier 2017
    Article dans une revue

    Two upper-rim-functionalised calix[4]arenes, 5-di- phenylphosphino-25,26,27,28-tetra-benzyloxycalix[4]arene and 5-diphenylphosphino-25,26,27,28-tetra-(p-anisyl)methyloxy calix- [4]arene, were investigated in the nickel-catalysed cross- coupling of phenylboronic acid with aryl bromides. The cata- lytic activities are higher than those observed for other tri- arylphosphanes, notably PPh3 and P(o-tolyl)3 as well as the Buchwald-type ligand o-biph-PPh2 [TOFs up to 2600 mol(ArPh) mol(Ni)–1 h–1], but the production of large amounts of dehalogenation product could not be avoided, thus strongly contrasting with the classical Pd-catalysed reaction. Good activities were also obtained with aryl chlorides, even at room temperature. The higher efficiency of 1 and 2 relative to that of the Buchwald ligand 3 probably arises from the ease with which these two calix–phosphanes may form appropriate monophosphine complexes before the oxidative addition step.

  • Resorcinarene-based o-biarylphosphines in palladium catalysed Suzuki-Miyaura cross-coupling of bulky substrates

    Fethi Elaieb, David Sémeril, Dominique Matt
    European Journal of Inorganic Chemistry, 2017, 2017 (3), pp.685-693. ⟨10.1002/ejic.201601270⟩ | Publiée le 18 janvier 2017
    Article dans une revue

    Two o-biaryl phosphines in which the arene ring remote from the phosphorus atom is part of a resorcin[4]arene cavitand have been synthesised, characterised by X-ray diffraction, and assessed in the cross-coupling of bulky aryl chlorides with sterically hindered aryl-boronic acids. Only atropisomers with externally-located P atoms were obtained. The resorcinarene with a o-PCy 2-C 6 H 4 substituent operated ca. 1.4 times faster than the efficient Buchwald analogue SPhos. Its better performance was attributed to the permanent exopositioning of the metal centre which engenders steric interactions with two pentyl substituents, and therefore facilitates the reductive elimination step.

  • Local density approximation in site-occupation embedding theory

    Bruno Senjean, Masahisa Tsuchiizu, Vincent Robert, Emmanuel Fromager
    Molecular Physics, 2017, 115 (1-2), pp.48-62. ⟨10.1080/00268976.2016.1182224⟩ | Publiée le 17 janvier 2017
    Article dans une revue

    Site-occupation embedding theory (SOET) is a density-functional theory (DFT)-based method which aims at modelling strongly correlated electrons. It is in principle exact and applicable to model and quantum chemical Hamiltonians. The theory is presented here for the Hubbard Hamiltonian. In contrast to conventional DFT approaches, the site (or orbital) occupations are deduced in SOET from a partially-interacting system consisting of one (or more) impurity site(s) and non-interacting bath sites. The correlation energy of the bath is then treated implicitly by means of a site-occupation functional. In this work, we propose a simple impurity-occupation functional approximation based on the two-level (2L) Hubbard model which is referred to as two-level impurity local density approximation (2L-ILDA). Results obtained on a prototypical uniform 8-site Hubbard ring are promising. The extension of the method to larger systems and more sophisticated model Hamiltonians is currently in progress.

  • From Models of Hemoproteins to Self-Assembled Molecular Wires

    Christophe Kahlfuss, Jennifer A. Wytko, Jean Weiss
    ChemPlusChem, 2017, 82 (4), pp.584-594. ⟨10.1002/cplu.201600557⟩ | Publiée le 16 janvier 2017
    Article dans une revue

    In Nature, the various properties of tetrapyrrolic macrocycles are mostly due to their proteic environment and result from an evolutionary process difficult to reproduce in the lifetime of a synthetic chemist. Thus, the task of synthetic chemists attempting to reproduce the biological role of porphyrin architectures performing functions from catalysis to light harvesting is significantly complicated. This account describes how a phenanthroline-strapped porphyrin architecture initially designed to afford new hemoprotein models led, over the last two decades, to the preparation of highly linear self-assembled nano-objects inspired by light-harvesting architectures. The approach summarized in the next pages mimics, in a very modest way, the polyvalence of tetrapyrrolic macrocycles in Nature.

  • Metal complexes with oxygen-functionalized NHC ligands: synthesis and applications

    Sophie Hameury, Pierre de Fremont, Pierre Braunstein
    Chem. Soc. Rev., 2017, 46 (3), pp.632-733. ⟨10.1039/C6CS00499G⟩ | Publiée le 13 janvier 2017
    Article dans une revue

    Ligand design has met with considerable success with both categories of hybrid ligands, which are characterized by chemically different donor groups, and of N-heterocyclic carbenes (NHCs). Their spectacular development and diversity are attracting worldwide interest and offers almost unlimited diversity and potential in e.g. coordination/organometallic main group and transition metal chemistry, catalysis, medicinal chemistry and materials science. This review aims at providing a comprehensive update on a specific class of ligands that has enjoyed much attention in the past few years, at the intersection between the two categories mentioned above, that of hybrid NHC ligands in which the functionality associated with the carbene donor is of the oxygen-donor type. For each type of oxygen-donor present in such chelating (Section 1) or bridging (Section 2) hybrid ligands, we will examine the synthesis, structures and reactivity of their metal complexes and their applications, with a special focus on homogeneous catalysis (Section 3). Thus, hydrogenation, C–H bond activation, C–C, C–N, C–O bond formation, hydrolysis of silanes, oligomerization, polymerization, metathesis, hydrosilylation, C–C bond cleavage, acceptorless dehydrogenation, dehalogenation/hydrogen transfer, oxidation and reduction reactions will be successively presented in a tabular manner, to facilitate an overview and a rapid identification of the relevant publications describing which metals associated with a given oxygen functionality are most suitable. The literature coverage includes the year 2015.

  • Catalytic Emulsion Based on Janus Nanosheets for Ultra-Deep Desulfurization

    Lixin Xia, Hairan Zhang, Zhichao Wei, Yi Jiang, Ling Zhang, Jie Zhao, Junhui Zhang, Li Dong, Erni Li, Laurent Ruhlmann, Qian Zhang
    Chemistry - A European Journal, 2017, 23 (8), pp.1920-1929. ⟨10.1002/chem.201604737⟩ | Publiée le 4 janvier 2017
    Article dans une revue

    Catalytic Janus nanosheets were synthesized by using an anion-exchange reaction between heteropolyacids (HPAs) and the modified ionic-liquid (IL) moieties of Janus nanosheets. Their morphology and surface properties were characterized by using SEM, energy-dispersive spectroscopy (EDS), FTIR spectroscopy, and X-ray photoelectron spectroscopy (XPS) studies. Because of their inherent Janus structure, the nanosheets exhibited good amphipathic character with ILs and oil to form a stable ILs-in-oil emulsion. Therefore, these Janus nanosheets can be used as both emulsifiers and catalysts to perform emulsive desulfurization. During this process, sulfur-containing compounds at the interface could be easily oxidized and efficiently removed from a model oil. Application of this Janus emulsion brings an efficient, useful, and green procedure to the desulfurization process. Compared with the desulfurization catalyzed by using HPAs in a conventional two-phase system, the sulfur removal of dibenzothiophene (DBT) achieved in a Janus emulsion system was improved from 68 to 97 % within 1.5 h. Moreover, this emulsion system could be demulsified easily by simple centrifugation to recover both the nanosheets and the ILs. Owing to the good structural stability of the Janus nanosheets, the sulfur removal efficiency of DBT could still reach 99.9 % after the catalytic nanosheets had been recycled at least six times.

  • Twisting Induces Ferromagnetism in Homometallic Clusters

    Ghenadie Novitchi, Sergi Vela, Guillaume Pilet, Cyrille Train, Vincent Robert
    Dalton Transactions, 2017, 46 (34), pp.11154-11158. ⟨10.1039/c7dt02360j⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    A helical chiral cluster bridging two sets of Cu 2 units is reported. The two double-strand ligands induce a distorted tetrahedral environment for one of the two copper(II) ions whereas the second one remains in a standard octahedral environment. Magnetic measurements and wavefunction calculations demonstrate that the copper(II) centres are ferromagnetically coupled (J = 7.7 cm-1). This ligand-driven ferromagnetic interaction thus appears as a proof-of-concept of an innovative strategy towards high-spin clusters.

  • Cavitand Chemistry - Towards Metallocapsular Catalysts: Cavitand Chemistry - Towards Metallocapsular Catalysts

    Thierry Chavagnan, David Semeril, Dominique Matt, Loic Toupet
    European Journal of Organic Chemistry, 2017, 2017 (2), pp.313-323. ⟨10.1002/ejoc.201601278⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Two diphosphanes with widely separated P centres and cores that consists of two covalently linked resorcinarene cavitands were synthesised. Their ability to bind transition-metal ions in a chelating fashion with the concomitant formation of capsular complexes was shown in their reactions with metal centres with two available binding sites. The solid-state structure of one of the complexes, a capsule with a partially embedded “trans-PtCl2” unit, was determined by single-crystal X-ray diffraction. Upon reaction with SnCl2, this complex developed good activity for the hydroformylation of styrene. Its activity and selectivity towards the branched aldehyde were significantly superior to those observed for the reference complex trans-PtCl2L2, in which L is a monophosphane monocavitand ligand. The higher activity is likely to reflect the initial formation of a hydrido intermediate with a somewhat distorted trigonal-bipyramidal structure that facilitates the intracapsular olefin/PtH insertion step. The observed aldehyde selectivity is probably controlled by the shape of the capsule, which is sterically better suited for hosting a branched Pt–alkyl unit than a linear one.

  • A Question of Flexibility in Models of Cytochrome c Oxidase

    Pauline Vorburger, Mamadou Lo, Sylvie Choua, Maxime Bernard, Frederic Melin, N Oueslati, Corinne Boudon, Mourad Elhabiri, Jennifer Wytko-Weiss, Petra Hellwig, Jean Weiss
    Inorganica Chimica Acta, 2017, 468, pp.232-238. ⟨10.1016/j.ica.2017.04.052⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The structure-property relationships were compared for the iron and iron-copper complexes of two functional cytochrome c oxidase models, 1 and 2, both constructed upon a phenanthroline-strapped porphyrin bearing respectively pyridyl or picolinyl built-in proximal and distal ligands. The behavior of these heme models in the absence and in the presence of copper was studied by 1H NMR, UV–visible absorption, EPR, Raman and FTIR spectroscopies, electrochemistry in solution and deposited on a rotating ring-disk graphite electrode. The distal binding site within the phenanthroline pocket of both 1 and 2 is available for the coordination of exogenic ligands, yet the oxygen binding affinity is higher for all complexes of 2 than for 1. Despite this difference, [1FeIICuI] more efficiently reproduced the electrocatalyzed reduction of oxygen to water than [2FeIICuI]. The oxygenated complexes of both iron(II)-copper(I) species mimic the ability of cytochrome c oxidase to reversibly bind O2, as shown by competitive binding studies in the presence of CO. Differences in the binding and electrocatalytic properties of these models stem from difference in rigidity of scaffolds upon binding of both the proximal and distal ligands, as well as from the bulkiness of the distal ligand.

  • Circumventing Intrinsic Metal Reactivity: Radical Generation with Redox-Active Ligands

    Jérémy Jacquet, Khaled Cheaib, Yufeng Ren, Hervé Vezin, Maylis Orio, Sébastien Blanchard, Louis Fensterbank, Marine Desage-El Murr
    Chemistry - A European Journal, 2017, 23 (60), pp.15030-15034. ⟨10.1002/chem.201704049⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Nickel complexes have gained sustained attention as efficient catalysts in cross‐coupling reactions and co‐catalysts in dual systems due to their ability to react with radical species. Central to this reactivity is nickel's propensity to shuttle through several accessible redox states from Ni0 to NiIV. Here, we report the catalytic generation of trifluoromethyl radicals from a nickel complex bearing redox‐active iminosemiquinone ligands. This unprecedented reactivity is enabled through ligand‐based oxidation performing electron transfer to an electrophilic CF3+ source while the nickel oxidation state is preserved. Additionally, extension of this reactivity to a copper complex bearing a single redox equivalent is reported, thus providing a unified reactivity scheme. These results open new pathways in radical chemistry with redox‐active ligands.

  • Non-symmetrical, potentially redox non-innocent imino NHC pyridine ‘pincers’ via a zinc ion template-assisted synthesis

    Thomas Simler, Andreas Danopoulos, Pierre Braunstein
    Dalton Transactions, 2017, 46 (18), pp.5955-5964. ⟨10.1039/C7DT01014A⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    We present here computational work on the center-of-mass displacements in thin polymer films of finite width without topological constraints and without momentum conservation obtained using a well-known lattice Monte Carlo algorithm with chain lengths ranging up to N = 8192. Computing directly the center-of-mass displacement correlation function CN(t) allows to make manifest the existence of scale-free colored forces acting on a reference chain. As suggested by the scaling arguments put forward in a recent work on three-dimensional melts, we obtain a negative algebraic decay CN(t) ∼ −1/(N t) for times t ≪ TN with TN being the chain relaxation time. This implies a logarithmic correction to the related center-of-mass mean square-displacement hN(t) as has been checked directly.

  • Accessing Two-Coordinate ZnII Organocations by NHC Coordination: Synthesis, Structure, and Use as π-Lewis Acids in Alkene, Alkyne, and CO2 Hydrosilylation

    David Specklin, Frédéric Hild, Christophe Fliedel, Christophe Gourlaouen, Luis Veiros, Samuel Dagorne
    Chemistry - A European Journal, 2017, 23 (63), pp.15908-15912. ⟨10.1002/chem.201704382⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Discrete two-coordinate ZnII organocations of the type (NHC)Zn−R+ are reported, thanks to NHC stabilization. In preliminary reactivity studies, such entities, which are direct cationic analogues of long-known ZnR2 species, act as effective and tunable π-Lewis acid catalysts in alkene, alkyne, and CO2 hydrosilylation.

  • Heteroleptic, two-coordinate [M(NHC){N(SiMe3)2}] (M = Co, Fe) complexes: synthesis, reactivity and magnetism rationalized by an unexpected metal oxidation state

    Andreas A Danopoulos, Pierre Braunstein, Kirill Yu Monakhov, Jan van Leusen, Paul Kögerler, Martin Clémancey, Jean-Marc Latour, Anass A Benayad, Moniek Tromp, Elixabete Rezabal, Gilles Frison
    Dalton Transactions, 2017, ⟨10.1039/c6dt03565e⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The linear, two-coordinate and isostructural heteroleptic [M(IPr){N(SiMe3)2}] (IPr = 1,3-bis(diisopropyl-phenyl)-imidazol-2-ylidene), formally M(I) complexes (M = Co, 3; Fe, 4) were obtained by the reduction of [M(IPr)Cl{N(SiMe3)2}] with KC8, or [Co(IPr){N(SiMe3)2}2] with mes*PH2, mes* = 2,4,6-tBu3C6H2. The magnetism of 3 and 4 implies Co(II) and Fe(II) centres coupled to one ligand-delocalized electron, in line with XPS and XANES data; the ac susceptibility of 4 detected a pronounced frequency dependence due to slow magnetiza-tion relaxation. Reduction of [Fe(IPr)Cl{N(SiMe 3)2}] with excess KC 8 in toluene gave the heteronuclear 'inverse-sandwich' Fe–K complex 7, featuring 6-toluene sandwiched between one Fe(0) and one K(+) centre.

  • A ruthenium anticancer compound interacts with histones and impacts differently on epigenetic and death pathways compared to cisplatin

    Licona Cynthia, Spaety Marie-Elodie, Capuozzo Antonella, Ali Moussa, Santamaria Rita, Olivier Armant, Delalande Francois, Van Dorsselaer Alain, Cianferani Sarah, Spencer John, Pfeffer Michel, Mellitzer Georg, Gaiddon Christian
    Oncotarget, 2017, 8 (2), pp.2568-2584. ⟨10.18632/oncotarget.13711⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Ruthenium complexes are considered as potential replacements for platinumcompounds in oncotherapy. Their clinical development is handicapped by a lackof consensus on their mode of action. In this study, we identify three histones(H3.1, H2A, H2B) as possible targets for an anticancer redox organorutheniumcompound (RDC11). Using puriied histones, we conirmed an interaction betweenthe ruthenium complex and histones that impacted on histone complex formation.A comparative study of the ruthenium complex versus cisplatin showed differentialepigenetic modiications on histone H3 that correlated with differential expressionof histone deacetylase (HDAC) genes. We then characterized the impact of theseepigenetic modiications on signaling pathways employing a transcriptomicapproach. Clustering analyses showed gene expression signatures speciic forcisplatin (42%) and for the ruthenium complex (30%). Signaling pathway analysespointed to speciicities distinguishing the ruthenium complex from cisplatin. Forinstance, cisplatin triggered preferentially p53 and folate biosynthesis while theruthenium complex induced endoplasmic reticulum stress and trans-sulfurationpathways. To further understand the role of HDACs in these regulations, we usedsuberanilohydroxamic acid (SAHA) and showed that it synergized with cisplatincytotoxicity while antagonizing the ruthenium complex activity. This study providescritical information for the characterization of signaling pathways differentiatingboth compounds, in particular, by the identiication of a non-DNA direct target foran organoruthenium complex.

  • Organic substances from Egyptian jars of the Early Dynastic period (3100–2700 BCE): Mode of preparation, alteration processes and botanical (re)assessment of “cedrium”

    Mathilde Sarret, Pierre Adam, Philippe Schaeffer, Quentin Ebert, Julien Perthuison, Geneviève Pierrat-Bonnefois
    Journal of Archaeological Science: Reports, 2017, 14, pp.420-431. ⟨10.1016/j.jasrep.2017.06.021⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Organic substances from three jars found at Abydos in the tombs of Kings from the two first Egyptian dynasties (3100–2700 BCE) were investigated using gas chromatography–mass spectrometry in order to assess their biological origin, use and mode of preparation. The organic material was found to correspond to essential oils from conifers severely altered/oxidized. A predominant contribution from Cedrus libani was determined from the identification of sesquiterpenoid derivatives of the himachalene series which constitute new molecular tools for the identification of ancient oils made from real cedars. The presence of cuparene-related terpenoids suggests an additional contribution of members from the Cupressaceae family (junipers, cypresses). The genuine substances were most likely prepared in the Levant since neither C. libani nor junipers or cypresses are native from Egypt. Despite obvious analogies with “cedrium” used for embalming during later periods, their use as ingredients for embalming remains uncertain because true embalming only began in Egypt after 2500 BCE. Instead, it is proposed that these substances have been used as cosmetics, medicinal substances or for cultual purposes. The predominance of low molecular weight sesquiterpenoids and the absence of typical markers for wood tars indicate that the substances have possibly been prepared by steam-distillation of odoriferous plant material rather than by pyrolysis. Our study gives clues to the controversy concerning the composition of “cedrium”, indicating that it most likely originates from mixed true cedar and junipers or cypresses, and not exclusively from real cedar vs. juniper oil.

  • Site preferences in hetero-metallic [Fe 9−x Ni x ] clusters: a combined crystallographic, spectroscopic and theoretical analysis

    Anastasia Georgopoulou, Karrar Al-Ameed, Athanassios K Boudalis, Dimitrios Anagnostopoulos, Vassilis Psycharis, John Mcgrady, Yiannis Sanakis, Catherine Raptopoulou
    Dalton Transactions, 2017, 46 (38), pp.12835-12844. ⟨10.1039/c7dt02930f⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The reaction of mixtures of Fe(O2CMe)2·2H2O and Ni(O2CMe)2·4H2O of various compositions with di-2-pyridyl ketone (py2CO, dpk) in MeCN under an inert atmosphere afforded a family of hetero-metallic enneanuclear clusters with general formula [Fe9−xNix(μ4-OH)2(O2CMe)8(py2CO2)4] (2, x = 1.00; 3: x = 6.02; 4, x = 7.46; 5, x = 7.81). Clusters 2–5 are isomorphous to the homo-metallic [Fe9] cluster (1) previously reported by some of us, and also isostructural to the known homo-metallic [Ni9] cluster. All four clusters contain a central MII ion in an unusual 8-coordinate site and eight peripheral MII ions in distorted octahedral environments. The distribution of FeII and NiII ions over these two distinct coordination sites in 2–5 can be established through a combination of X-ray fluorescence and Mössbauer spectroscopies, which show that FeII preferentially occupies the unique 8-coordinate metal site while NiII accumulates in the octahedral holes. Density functional theory indicates that the distribution of ions across the two sites arises not from any intrinsic preference of the FeII ions for the 8-coordinate sites, but rather because of the large ligand field stabilization energy available to NiII in octahedral coordination.

  • Towards ionic liquids with tailored magnetic properties: bmim+ salts of ferro- and antiferromagnetic CuII3 triangles

    Athanassios K Boudalis, Guillaume Rogez, Benoît Heinrich, Raphael G. Raptis, Philippe Turek
    Dalton Transactions, 2017, 46 (36), pp.12263-12273. ⟨10.1039/c7dt02472j⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Complexes (bmim)2[Cu3(μ3-Cl)2(μ-pz)3Cl3] (1), (bmim)[Cu3(μ3-OH)(μ-pz)3Cl3] (2) and (bmim)2[Cu3(μ3-OH)(μ-Cl)(μ-pz)3Cl3] (3) were synthesized (bmim+ = 1-butyl-3-methylimidazolium, pz− = pyrazolato anion). Dianionic complexes 1 and 3 were obtained as crystalline solids, whereas the monoanionic complex 2 was obtained as a viscous paste. Magnetic susceptibility and X-band EPR studies revealed intramolecular ferromagnetic interactions for 1 with small magnetoanisotropy in its ground state (D3/2 ∼ 10−3 cm−1) and intramolecular antiferromagnetic interactions for 2 and 3 (−285 and −98 cm−1 average J, respectively) with important magnetic anisotropy in their ground states stemming from a combination of low magnetic symmetry and antisymmetric exchange interactions. Thermal studies revealed a clear melting point of 140 °C for 1, which is lower than that of its PPN+ and Bu4N+ analogues (1PPN and 1Bu4N, respectively, PPN+ = bis(triphenylphosphine)iminium). Upon cooling, 1 remains molten down to 70 °C. Mixtures of the salts 1, 1PPN and 1Bu4N, exhibited modified melting behaviours, with the mixtures exhibiting lower melting points than those of either of their pure components.

  • Cysteine and glutathione trigger the Cu–Zn swap between Cu( ii )-amyloid-β 4-16 peptide and Zn 7 -metallothionein-3

    Alice Santoro, Nina Ewa Wezynfeld, Milan Vašák, Wojciech Bal, Peter Faller
    Chemical Communications, 2017, 53 (85), pp.11634-11637. ⟨10.1039/C7CC06802F⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Cysteine and glutathione are able to reduce Cu(II) coordinated to the peptide Amyloidβ4-16, and shuttle the resulting Cu(I) to partially replace Zn(II) in the protein Zn7-Metallothionein-3. The released Zn(II) in turn binds to amyloid-β4-16. Thus cysteine and glutathione are modulators of Cu-distribution between metallothionein-3 and amyloid-β4-16.

  • Crystal Structure and Corrosion Inhibition Properties of Ferrocenyl- and Phenylendiamine-Iminomethylphenoxy Cobalt Complexes.

    Nadra Belhadj, Ali Ourari, Saida Keraghel, Bernd Schöllhorn, Dominique Matt
    Journal of Chemical Crystallography, 2017, 47 (1-2), pp.40-46. ⟨10.1007/s10870-017-0678-y⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The crystal structures of bis[2-(ferrocenyl-iminomethyl)phenoxy]cobalt(II) (CoII(L)2) [monoclinic, a 12.5466(3), b 10.6782(3), c 21.2695(6) Å, α = γ 90.°, β 92.944(2)°, V = 2845.82(13) Å3, Z = 4, space group P21/c] and bis(2-[(4-dimethylamino-phenylimino)-methyl]-phenoxy)cobalt(II) (CoII(M)2) [triclinic, a 10.2916(4), b 16.4867(10), c 17.6782(11) Å, α 114.754(2), β 96.614(4), γ 97.736(4)°, Z = 4, space group P-1] dominated by extensive hydrogen bonding such as O-H···N, N-H···O and N-H···N interactions. In both structures the central CoII is displaying a slightly distorted tetrahedral coordination sphere involving two iminoethyl-phenoxy ligands. The inhibition efficiency of the Co complexes concerning the corrosion of mild steel in acidic soln. was studied by electrochem. impedance spectroscopy. [on SciFinder(R)]

  • Metal Confinement through N-(9-Alkyl)fluorenyl-Substituted N-Heterocyclic Carbenes and Its Consequences in Gold-Catalysed Reactions Involving Enynes

    Matthieu Teci, Damien Hueber, Patrick Pale, Loic Toupet, Aurélien Blanc, Eric Brenner, Dominique Matt
    Chemistry - A European Journal, 2017, 23 (32), pp.7809--7818. ⟨10.1002/chem.201701129⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    A series of gold(I) and gold(III) complexes containing bulky bis-N, N '-(9-alkylfluorenyl) heterocyclic carbene (F-R-NHC) ligands have been prepared in high yields from appropriate imidazolinium, imidazolium and benzimidazolium salts. In all complexes, the carbene ligand provides high steric protection of the Au-X bond trans to the carbenic C atom. Irrespective of the metal oxidation state, the complexes showed high efficiency in a tandem 3,3-rearrangement/Nazarov reaction of an enynyl acetate. One of the Au-III complexes, [AuCl3(F-R-NHC)], was further found to be suitable for the efficient cyclisation of a propargylcarboxamide. Furthermore, unlike related NHC-gold(I) complexes based on conventional bulky N-heterocyclic carbenes (notably, 1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene (IPr), 1,3-bis-(2,4,6-trimethylphenyl) imidazol-2-ylidene (IMes) and 1,3-(bis-tertbutyl) imidazol-2-ylidene (ItBu)), the studied [(AuCl)-Cl-I(F-R-NHC)] complexes catalysed the conversion of a 1,6-enyne in the presence of indole into a single product; this arises from the embracing character of the ligand, which prevents indole addition on one of the catalytic intermediates. A structure/selectivity relationship was established for all carbenes tested that took into account percent buried volumes and topographic steric maps. The results illustrate the high potential of confining NHCs in organic synthesis.

  • Resorcinarene-Based o-Biarylphosphines in Palladium-Catalysed Suzuki-Miyaura Cross-Coupling Reactions of Bulky Substrates.

    Fethi Elaieb, David Sémeril, Dominique Matt
    European Journal of Inorganic Chemistry, 2017, 2017 (3), pp.685-693. ⟨10.1002/ejic.201601270⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Two o-biarylphosphines, in which the arene ring remote from the phosphorus atom is part of a resorcin[4]arene cavitand, have been synthesized, characterised by X-ray diffraction and assessed in the cross-coupling reactions of bulky aryl chlorides with sterically hindered arylboronic acids. Only atropisomers with externally located P atoms were obtained. The resorcinarene ligand with the o-PCy2C6H4 substituent was found to be more efficient than the Buchwald analog SPhos in catalyzing coupling reactions, reacting around 1.4 times faster. Its superior performance has been attributed to the permanent exo positioning of the metal center, which engenders steric interactions with two pentyl substituents and therefore facilitates the reductive elimination step. [on SciFinder(R)]

  • Direct Spirocyclization from Keto-sulfonamides: An Approach to Azaspiro Compounds

    Frédéric Beltran, Indira Fabre, Ilaria Ciofini, Laurence Miesch
    Organic Letters, 2017, 19 (19), pp.5042-5045. ⟨10.1021/acs.orglett.7b02216⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Spontaneous spirocyclization of keto-sulfonamides via ynamides through a one-pot process is presented. Push–pull ynamides were obtained through Michael addition/elimination without Cu. The obtained azaspiro compounds are building blocks for indole alkaloids. Theoretical studies provide insights into the mechanism of the formal Conia-ene reaction.

  • Mononuclear salen-gallium complexes for iso-selective ring-opening polymerization (ROP) of rac-lactide

    David Specklin, Christophe Fliedel, Frédéric Hild, Samir Mameri, Lydia Karmazin, Corinne Bailly, Samuel Dagorne
    Dalton Transactions, 2017, 46 (38), pp.12824-12834. ⟨10.1039/C7DT02730C⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Mononuclear salen-supported Ga amido and alkoxide complexes, structurally characterized herein, mediate the controlled and iso-selective polymerization of rac -lactide.

  • Immunological, chemical and clinical aspects of exposure to mixtures of contact allergens

    Charlotte M Bonefeld, Carsten Geisler, Elena Giménez-Arnau, Jean-Pierre Lepoittevin, Wolfgang Uter, Jeanne D Johansen
    Contact Dermatitis, 2017, 77 (3), pp.133-142. ⟨10.1111/cod.12847⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Allergic contact dermatitis is one of the most frequent forms of skin inflammation. Very often, we are exposed to mixtures of allergens with varying potency, dose/area and exposure time. Therefore, improved knowledge about immune responses to combinations of contact allergens is highly relevant. In this article, we provide a general introduction to immune responses to contact allergens and discuss the literature concerning immune responses to mixtures of allergens. Normally, increased responses are induced following sensitization with combinations of allergens compared to single allergens. The response against a mixture of allergens can be both additive and synergistic depending on the dose and combination of allergens. Importantly, sensitization with combinations of either fragrance allergens or metal salts can result in increased challenge responses to specific allergens within the mixture. Taken together, the immune responses to mixtures of allergens are complex, and further studies are required to obtain the necessary knowledge to provide better consumer safety.

  • Linear, Trinuclear Cobalt Complexes with o -Phenylene-bis-Silylamido Ligands

    Kirill Yu. Monakhov, Jan van Leusen, Paul Kögerler, Emilie-Laure Zins, M. Esmaïl Alikhani, Moniek Tromp, Andreas Danopoulos, Pierre Braunstein
    Chemistry - A European Journal, 2017, 23 (27), pp.6504 - 6508. ⟨10.1002/chem.201700496⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Transamination of [Co{N(SiMe3)2}2]2 with C6H4(NHSiiPr3)2 gave the centrosymmetric trinuclear [{CoterN(SiMe3)2(μ-η-[o-C6H4(κNSiiPr3)2])}2Coint] (1) (Coter, Coint=terminal, internal Co, respectively), with 3-coordinate Coter, and Coint “sandwiched” between the o-phenylenes of the two ligands; experimental and computational data support CoII centres and ditopic o-amido-imino-cyclohexen-allyl ligands; magnetic studies reveal intermetallic ferromagnetic interactions and single-molecule magnet (SMM) character. One-electron reduction of 1 yielded the salt [K(18-crown-6)(THF)2][{CoterN(SiMe3)2(μ-η-[o-C6H4(κNSiiPr3)2])}2Coint] (4) with the anion isostructural to 1. The centrosymmetric Fe complex [{FeterN(SiMe3)2(μ-η-[o-C6H4(κNSiiPr3)2])}2Feint] (5), analogous to 1, was also obtained.

  • Molecular, isotopic and radiocarbon evidence for broomcorn millet cropping in Northeast France since the Bronze Age

    Blandine Courel, Philippe Schaeffer, Pierre Adam, Estelle Motsch, Quentin Ebert, Emile Moser, Clément Féliu, Stefano M. Bernasconi, Irka Hajdas, Ertlen Damien, Dominique Schwartz
    Organic Geochemistry, 2017, 110, pp.13-24. ⟨10.1016/j.orggeochem.2017.03.002⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Molecular and isotopic investigation of lipids from soils filling several structures from an archaeological site located at Obernai (Alsace, NE France) has revealed the presence of miliacin, a triterpenoid marker from Panicum miliaceum (broomcorn millet), indicating that this cereal was cultivated at the site. The concentration profiles of miliacin within silos and its detection in other archaeological structures (e.g., Gaulish pit) suggest that miliacin did not originate from cereals stored in the silos but rather came from remains of millet from cultivated soils which filled the silos after they were abandoned. Furthermore, the 14C age of miliacin isolated from a silo of the Second Iron Age was shown to be considerably older (Bronze Age) than the structure itself, revealing that the soil filling the silo therefore archived the molecular signature from past millet cropping, predating the digging of the silo. Thus, radiocarbon dating of the isolated miliacin allowed the timing of millet cropping to be determined, showing that it was established during the Bronze Age and the Roman Gaul period at Obernai. This is the first evidence of millet cultivation in Alsace dating back to the Bronze Age, bringing new perspectives on agricultural practices and past dietary practice in Eastern France. The combination of molecular studies and radiocarbon dating of individual lipids highlights the potential of hollow structures like silos and pits to act as “pedological traps”, recording information on past vegetation cover or agricultural practices from the surface horizons of surrounding soils that filled these structures after abandonment.

  • Mono- and polynuclear Ag(I) complexes of N-functionalized bis(diphenylphosphino)amine DPPA-type ligands: synthesis, solid-state structures and reactivity

    Alessio Ghisolfi, Christophe Fliedel, Pierre de Frémont, Pierre Braunstein
    Dalton Transactions, 2017, 46 (17), pp.5571-5586. ⟨10.1039/C6DT04755F⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The reactivity of the N-functionalized DPPA-type ligands (Ph2P)2N(p-Z)C6H4 [Z = H (1a), SMe (1b), OMe (1c)] with AgBF4 was investigated and revealed an unexpected influence of the para substituent Z of the N-aryl ligand. In acetone, the mononuclear bis-chelated [Ag{(1a–1c)-P,P}2]BF4 (2a·BF4–2c·BF4) and dinuclear bridged [Ag2{μ2-(1a–1c)-P,P}2](BF4)2 [3a·(BF4)2–3c·(BF4)2] complexes were obtained with a 1 : 2 and 1 : 1 AgBF4/ligand molar ratio, respectively. While the molecular structures of 2a·BF4 and 2b·BF4 determined in the solid-state by X-ray diffraction revealed their mononuclear nature and the absence of cation/anion interaction, complexes 3b·(BF4)2 and 3c·(BF4)2 form 2D coordination polymers through intermolecular Ag–S or Ag–O interactions, respectively, involving the N-function of the respective DPPA-type ligand, and display direct interactions between one BF4 anion and both Ag(I) cations. Surprisingly, the equimolar reaction between ligands 1a–1c and AgBF4 in CH2Cl2 led to different proportions of the dinuclear complexes 3a·(BF4)2–3c·(BF4)2 and clusters [Ag3(μ3-Cl)2{μ2-(1b–1c)-P,P}3]BF4 (4b·BF4–4c·BF4), depending on the nature of the para substituent Z of the N-aryl ligand. The trinuclear complexes resulted from C–Cl bond activation of the chlorinated solvent and were characterized by NMR spectroscopy and X-ray diffraction, and could be selectively produced by addition of 2/3 equiv. of [NMe4]Cl to the corresponding dinuclear complexes or by a one-pot procedure involving the correct amount of each reagent. A series of experiments and kinetic NMR investigations were performed to gain further insight into the formation of the trinuclear Ag3Cl2 core clusters.

  • Locking and Unlocking the Molecular Spin Crossover Transition

    Xin Zhang, Paulo S. Costa, James Hooper, Daniel P. Miller, Alpha T. N'Diaye, Sumit Beniwal, Xuanyuan Jiang, Yuewei Yin, Patrick Rosa, Lucie Routaboul, Mathieu Gonidec, Lorenzo Poggini, Pierre Braunstein, Bernard Doudin, Xiaoshan Xu, Axel Enders, Eva Zurek, Peter A Dowben
    Advanced Materials, 2017, 29 (39), 1702257 (10 p.). ⟨10.1002/adma.201702257⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The Fe(II) spin crossover complex [Fe{H2 B(pz)2 }2 (bipy)] (pz = pyrazol-1-yl, bipy = 2,2'-bipyridine) can be locked in a largely low-spin-state configuration over a temperature range that includes temperatures well above the thermal spin crossover temperature of 160 K. This locking of the spin state is achieved for nanometer thin films of this complex in two distinct ways: through substrate interactions with dielectric substrates such as SiO2 and Al2 O3 , or in powder samples by mixing with the strongly dipolar zwitterionic p-benzoquinonemonoimine C6 H2 (-⋯ NH2 )2 (-⋯ O)2 . Remarkably, it is found in both cases that incident X-ray fluences then restore the [Fe{H2 B(pz)2 }2 (bipy)] moiety to an electronic state characteristic of the high spin state at temperatures of 200 K to above room temperature; that is, well above the spin crossover transition temperature for the pristine powder, and well above the temperatures characteristic of light- or X-ray-induced excited-spin-state trapping. Heating slightly above room temperature allows the initial locked state to be restored. These findings, supported by theory, show how the spin crossover transition can be manipulated reversibly around room temperature by appropriate design of the electrostatic and chemical environment.

  • Calix[4]arene-fused phospholes

    Fethi Elaieb, David Sémeril, Dominique Matt, Michel Pfeffer, Pierre-Antoine Bouit, Muriel Hissler, Christophe Gourlaouen, Jack Harrowfield
    Dalton Transactions, 2017, 46 (30), pp.9833-9845. ⟨10.1039/C7DT01899A⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    An upper rim, o-(diphenylphosphinyl)phenyl-substituted calix[4]arene has been prepared and its coordinative properties investigated. When heated in the presence of palladium, the new biarylphosphine undergoes conversion into two diastereomeric, calixarene-fused phospholes. In both, the P lone pair adopts a fixed orientation with respect to the calixarene core. The more hindered phosphole (8), i.e. the one with the endo-oriented lone pair (cone angle 150°–175°), forms complexes having their metal centre positioned very near the calixarene unit but outside the cavity, thus inducing an unusual chemical shift of one of the methylenic ArCH2Ar protons owing to interactions with the metal centre. As expected for dibenzophospholes, the complex [Rh(acac)(CO)·8], when combined with one equivalent of free 8, efficiently catalyses the hydroformylation of styrene, the catalytic system displaying high regioselectivity in favour of the branched aldehyde (b/l ratio up to 30). The optical and redox properties of the derivatives have also been investigated.

  • Acidity versus metal-induced Lewis acidity in zeolites for Friedel–Crafts acylation

    Claire Bernardon, Manel Ben Osman, Guillaume Laugel, Benoît Louis, Patrick Pale
    Comptes Rendus Chimie , 2017, ⟨10.1016/j.crci.2016.03.008⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Acid catalysts including Ni, Ag and Fe-loaded zeolites of different structures were prepared either via cationic exchange or impregnation techniques from pristine H-zeolites (BEA, and MFI). Their catalytic activity was evaluated in the liquid-phase Friedel–Crafts acylation of anisole with propanoic acid. It turned out that, whatever the doping procedure was, the zeolite loaded with transition metals led to considerable decrease in propanoic acid conversion, regardless of the nature or the metal content. However, the extent of this detrimental effect followed the order: Ag+ > Ni2+ > Fe3+.Pristine acidic zeolites were not only found to be the most active, but also to be the most selective toward ortho- and para-acylation products. H-ZSM-5 zeolites yielded the highest intrinsic activity, with TOF values of 0.09 h−1. The catalyst activity proved to be essentially attributed to the density and accessibility of Brønsted acid sites, playing a key role in the activation of the reactants. Brønsted sites are proposed to be the most likely catalytic species for performing this Friedel–Crafts acylation.

  • Bistable [ c 2] Daisy Chain Rotaxanes as Reversible Muscle-like Actuators in Mechanically Active Gels

    Antoine Goujon, Thomas Lang, Giacomo Mariani, Emilie Moulin, Gad Fuks, Jesus Raya, Eric Buhler, Nicolas Giuseppone
    Journal of the American Chemical Society, 2017, 139 (42), pp.14825-14828. ⟨10.1021/jacs.7b06710⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The implementation of molecular machines in polymer science is of high interest to transfer mechanical motions from nanoscale to macroscale in order to access new kinds of active devices and materials. Toward this objective, thermodynamic and topological aspects need to be explored for reaching efficient systems capable of producing a useful work. In this paper we describe the branched polymerization of pH-sensitive bistable [c2] daisy chain rotaxanes by using copper(I)-catalyzed Huisgen 1,3-dipolar cycloaddition (“click chemistry”). With this cross-linked topology, the corresponding materials in the form of chemical gels can be contracted and expanded over a large variation of volume (∼50%) by changing the protonation state of the system. HR-MAS 1H NMR and neutron scattering experiments reveal that this macroscopic response of the gels results from the synchronized actuation of the mechanical bonds at the molecular level.

  • Substrate-Selective Olefin Hydrogenation with a Cavitand-Based Bis(N-anisyl iminophosphorane): Substrate-Selective Olefin Hydrogenation with a Cavitand-Based Bis(N-anisyl iminophosphorane)

    Thierry Chavagnan, Claude Bauder, David Semeril, Dominique Matt, Loic Toupet
    European Journal of Organic Chemistry, 2017, 2017 (1), pp.70-76. ⟨10.1002/ejoc.201601125⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    A distally-substituted resorcin[4]arene cavitand equipped with two remote N-anisyl-imino-phosphoranyl (AIP) units has been synthesised and assessed in the competitive hydrogenation of α-olefins (rhodium catalyst). A substrate-selectivity factor of 39.2 in favour of the linear olefin was observed after 1 h in the reduction of stoichiometric amounts of hex-1-ene and 3-ethyl-pent-1-ene. The catalyst was also shown to be suitable for the regioselective reduction of a compound that has two double bonds in different steric environments. The remarkable olefin discrimination probably arises from the ability of the ligand to generate a cavity-capping N,O-chelator involving both AIP groups. Chelate formation positions the reactive metal sites inside the receptor moiety, the restricted size of which may retard the coordination of larger α-olefins. The results of this study encourage the further development of cavitands as shape-selective catalysts.

  • Further insights into the role of carbon in manganese oxide/carbon composites in the oxygen reduction reaction in alkaline media

    Anna Ryabova, Antoine Bonnefont, Pavel A. Simonov, Thierry Dintzer, Corinne Bouillet, Yulia G. Bogdanova, Galina A. Tsirlina, Elena Savinova
    Electrochimica Acta, 2017, 246, pp.643-653. ⟨10.1016/j.electacta.2017.06.017⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Manganese oxides are known as active catalysts for the oxygen reduction reaction (ORR) in alkaline media. Being poor electronic conductors, for electrochemical applications, most of Mn oxides are either mixed with or supported on carbon materials, which impart electronic conductivity to the composite electrodes. A number of recent publications reported an immense influence of carbon materials on the electrocatalytic activity of transition metal oxides in the ORR. To better understand the role of carbon, in this work we utilize a wide variety of carbon materials and investigate the ORR on Mn2O3/carbon composites combining experiment with kinetic modeling. Such an approach allows us to discriminate the contribution of carbon in the ORR activity of composites, underscoring its positive role in improving the oxide utilization, and acting as the ORR co-catalyst, but also its negative role in competing for the adsorption of O-2. By juxtaposing the electrocatalytic activity with the structural and morphological characteristics carbon materials, we propose some rules of thumb for choosing carbons necessary for creating efficient oxide/carbon ORR electrocatalysts. (C) 2017 Elsevier Ltd. All rights reserved.

  • Platinum group metal-free NiMo hydrogen oxidation catalysts: high performance and durability in alkaline exchange membrane fuel cells

    Sadia Kabir, Kenneth Lemire, Kateryna Artyushkova, Aaron Roy, Madeleine Odgaard, Debbie Schlueter, Alexandr Oshchepkov, Antoine Bonnefont, Elena Savinova, Dinesh C. Sabarirajan, Pratiti Mandal, Ethan J. Crumlin, Iryna V. Zenyuk, Plamen Atanassov, Alexey Serov
    Journal of Materials Chemistry A, 2017, 5, pp.24433-24443. ⟨10.1039/C7TA08718G⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    We introduce a new platinum group metal-free (PGM-free) hydrogen oxidation electrocatalyst with superior performance in anodes of alkaline exchange membrane fuel cells (AEMFCs). A carbon-supported bimetallic nickel–molybdenum catalyst was synthesized by thermal reduction of transition metal precursors on the surface of a carbon support (KetjenBlack 600J). The mass-weighted activity of 4.5 A gMe−1 determined in a liquid electrolyte 0.1 M NaOH using a rotating disk electrode (RDE) technique is comparable to the value reported for Pd/C with a comparable particle size under similar conditions. This NiMo/KB catalyst was integrated in a membrane electrode assembly (MEA) using an alkaline exchange membrane and ionomer. Single AEMFC tests performed in a H2/O2 configuration resulted in a record power density output of 120 mW cm−2 at 0.5 V, the MEA was found to be durable under the conditions of potential hold of 0.7 V for 115 h. For the first time, operando X-ray computed tomography (CT) experiments were performed demonstrating liquid water formation at the PGM-free anode during cell operation, and in situ ambient pressure X-ray photoelectron spectroscopy (APXPS) and X-ray absorption spectroscopy (APXAS) were used to study the role of molybdenum in hydrogen adsorption.

  • Metallothionein, Copper and Alpha-Synuclein in Alpha-Synucleinopathies

    Yuho Okita, Alexandre N. Rcom-H'Cheo-Gauthier, Michael Goulding, Roger S. Chung, Peter Faller, Dean L. Pountney
    Frontiers in Neuroscience, 2017, 11, pp.114. ⟨10.3389/fnins.2017.00114⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Metallothioneins (MTs) are proteins that function by metal exchange to regulate the bioavailability of metals, such as zinc and copper. Copper functions in the brain to regulate mitochondria, neurotransmitter production, and cell signaling. Inappropriate copper binding can result in loss of protein function and Cu(I)/(II) redox cycling can generate reactive oxygen species. Copper accumulates in the brain with aging and has been shown to bind alpha-synuclein and initiate its aggregation, the primary aetiological factor in Parkinson's disease (PD), and other alpha-synucleinopathies. In PD, total tissue copper is decreased, including neuromelanin-bound copper and there is a reduction in copper transporter CTR-1. Conversely cerebrospinal fluid (CSF) copper is increased. MT-1/2 expression is increased in activated astrocytes in alpha-synucleinopathies, yet expression of the neuronal MT-3 isoform may be reduced. MTs have been implicated in inflammatory states to perform one-way exchange of copper, releasing free zinc and recent studies have found copper bound to alpha-synuclein is transferred to the MT-3 isoform in vitro and MT-3 is found bound to pathological alpha-synuclein aggregates in the alpha-synucleinopathy, multiple systems atrophy. Moreover, both MT and alpha-synuclein can be released and taken up by neural cells via specific receptors and so may interact both intra- and extra-cellularly. Here, we critically review the role of MTs in copper dyshomeostasis and alpha-synuclein aggregation, and their potential as biomarkers and therapeutic targets.

  • Cu(II) binding to the peptide Ala-His-His, a chimera of the canonical Cu(II)-binding motifs Xxx-His and Xxx-Zzz-His

    Paulina Gonzalez, Bertrand Vileno, Karolina Bossak, Youssef El Khoury, P. Hellwig, W. Bal, Christelle Hureau, Peter Faller
    Inorganic Chemistry, 2017, 56 (24), pp.14870-14879. ⟨10.1021/acs.inorgchem.7b01996⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Peptides and proteins with the N-terminal motifs NH2-Xxx-His and NH2-Xxx-Zzz-His form well-established Cu(II) complexes. The canonical peptides are Gly-His-Lys and Asp-Ala-His-Lys (from the wound healing factor and human serum albumin, respectively). Cu(II) is bound to NH2-Xxx-His via three nitrogens from the peptide and an external ligand in the equatorial plane (called 3N form here). In contrast, Cu(II) is bound to NH2-Xxx-Zzz-His via four nitrogens from the peptide in the equatorial plane (called 4N form here). These two motifs are not mutually exclusive, as the peptides with the sequence NH2-Xxx-His-His contain both of them. However, this chimera has never been fully explored. In this work, we use a multispectroscopic approach to analyze the Cu(II) binding to the chimeric peptide Ala-His-His (AHH). AHH is capable of forming the 3N- and 4N-type complexes in a pH dependent manner. The 3N form predominates at pH ∼ 4–6.5 and the 4N form at ∼ pH 6.5–10. NMR experiments showed that at pH 8.5, where Cu(II) is almost exclusively bound in the 4N form, the Cu(II)-exchange between AHH or the amidated AHH-NH2 is fast, in comparison to the nonchimeric 4N form (AAH). Together, the results show that the chimeric AHH can access both Cu(II) coordination types, that minor changes in the second (or further) coordination sphere can impact considerably the equilibrium between the forms, and that Cu kinetic exchange is fast even when Cu-AHH is mainly in the 4N form.

  • Enhanced Cooperativity in Supported Spin-Crossover Metal-Organic Frameworks

    Thomas Groizard, Nick Papior, Boris Le Guennic, Vincent Robert, Mikael Kepenekian
    Journal of Physical Chemistry Letters, 2017, 8 (14), pp.3415-3420. ⟨10.1021/acs.jpclett.7b01248⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The impact of surface deposition on cooperativity is explored in Au(111)-supported self-assembled metal-organic frameworks (MOFs) based on Fe(II) ions. Using a thermodynamic model, we first demonstrate that dimensionality reduction combined with deposition on a metal surface is likely to deeply enhance the spin-crossover cooperativity, going from gamma(3D) = 16 K for the bulk material to gamma(supp)(2D) = 386 K for its 2D supported derivative. On the basis of density functional theory, we then elucidate the electronic structure of a promising Fe-based MOF. A chemical strategy is proposed to turn a weakly interacting magnetic system into a strongly cooperative spin-crossover monolayer with gamma(Au(111))(MOF) = 83 K. These results open a promising route to the fabrication of cooperative materials based on SCO Fe(II) platforms.

  • Ruthenium Carbon-Rich Group as a Redox-Switchable Metal Coupling Unit in Linear Trinuclear Complexes

    E. Di Piazza, C. Boilleau, A. Vacher, K. Merahi, L. Norel, K. Costuas, T. Roisnel, S. Choua, Philippe Turek, S. Rigaut
    Inorganic Chemistry, 2017, 56 (23), pp.14540-14555. ⟨10.1021/acs.inorgchem.7b02288⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The preparation and properties of novel ruthenium carbon-rich complexes [(Ph-C≡C-)Ru(dppe)(-C≡C-bipyM(hfac))] (n = 1, 2; M = Cu, Mn; bipy = 2,2'-bipyridin-5-yl) characterized by single-crystal X-ray diffraction and designed for molecular magnetism are reported. With the help of EPR spectroscopy, we show that the neutral ruthenium system sets up a magnetic coupling between two remote paramagnetic Cu units. More specifically, these copper compounds are unique examples of bimetallic and linear heterotrimetallic compounds for which a complete rationalization of the magnetic interactions could be made for exceptionally long distances between the spin carriers (8.3 Å between adjacent Cu and Ru centers, 16.6 Å between external Cu centers) and compared at two different redox states. Surprisingly, oxidation of the ruthenium redox-active metal coupling unit (MCU), which introduces an additional spin unit on the carbon-rich part, leads to weaker magnetic interactions. In contrast, in the simpler parent complexes bearing only one paramagnetic metal unit [Ph-C≡C-Ru(dppe)-C≡C-bipyCu(hfac)], one-electron oxidation of the ruthenium bis(acetylide) unit generates an interaction between the Cu and Ru spin carriers of magnitude comparable to that observed between the two far apart Cu ions in the above corresponding neutral trimetallic system. Evaluation and rationalization of this coupling with theoretical tools are in rational agreement with experiments for such complex systems.

  • Highlight on the solution processes occurring on silver( i )-assembling porphyrins in the presence of an excess of silver salt

    T. T. Dang, Stephanie Durot, L. Monnereau, Valérie Heitz, A. Barbieri, B. Ventura
    Dalton Transactions, 2017, 46 (29), pp.9375-9381. ⟨10.1039/C7DT00974G⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Coordination cages obtained upon complexation of pyridyl functionalized porphyrins by Ag+ disassemble when overtaking a 1 : 2 stoichiometric amount of silver salt. An excess of Ag+ then leads to unusual chemical processes, here analyzed in detail, which permanently transform the monomeric porphyrins. The observed processes, discussed with reference to model compounds devoid of polyether substituted pyridyl residues, evidence a peculiar reactivity for meso 2,6-dimethylphenyl substituted porphyrins.

  • Efficient and Selective Hydrosilylation of Secondary and Tertiary Amides Catalyzed by an Iridium(III) Metallacycle: Development and Mechanistic Investigation

    Yann Corre, Xavier Trivelli, Frédéric Capet, Jean-Pierre Djukic, Francine Agbossou-Niedercorn, Christophe Michon
    ChemCatChem, 2017, 9 (11), pp.2009-2017. ⟨10.1002/cctc.201700400⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    In the present study, we show accessible cationic Ir(III) metallacycles catalyse efficiently the chemoselective hydrosilylation of tertiary and secondary amides to amines. The catalyst described herein operates at low loadings using inexpensive 1,1,3,3-tetramethyldisiloxane and allows fast reactions with high yields, selectivities and turnover numbers. Whereas a transient iminium intermediate has been observed for the first time by mass spectrometry, the activations of the catalyst and the silane reagent have been studied by DFT calculations. These fundamental insights support present and future improvements of Ir(III) metallacycles through proper ligand modifications and enable further broad applications of catalysts based on metallacycles.

  • Secondary Structure Determination by Means of ATR-FTIR Spectroscopy

    Batoul Srour, Stefan Bruechert, Susana L. A. Andrade, Petra Hellwig
    Methods in Molecular Biology, 2017, 1635, pp.195-203. ⟨10.1007/978-1-4939-7151-0_10⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Specialized infrared spectroscopic techniques have been developed that allow studying the secondary structure of membrane proteins and the influence of crucial parameters like lipid content and detergent. Here, we focus on an ATR-FTIR spectroscopic study of Af-Amt1 and the influence of LDAO/glycerol on its structural integrity. Our results clearly indicate that infrared spectroscopy can be used to identify the adapted sample conditions.

  • Aza-capped cyclodextrins for intra-cavity metal complexation

    D. Sechet, Z. Kaya, T. -A. Phan, M. Jouffroy, E. Bentouhami, D. Armspach, D. Matt, Loic Toupet
    Chemical Communications, 2017, 53 (85), pp.11717-11720. ⟨10.1039/c7cc06434a⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    Aza-capped, methylated cyclodextrins (CDs) were obtained in high yields by reacting the soft nitrogen nucleophile 2-nitrobenzenesulfonamide with either A, B-dimesylated CDs in basic media or their diol analogues under Mitsunobu reaction conditions followed by deprotection with thiophenol. A methyl pyridine substituent was grafted on the N atom of these secondary amines. When built on an alpha-CD scaffold, the resulting tertiary amine no longer undergoes nitrogen inversion at room temperature and behaves as a confining ligand, opening the way to intra-cavity metal complexation and promoting the formation of supramolecular helices.

  • Straightforward Access to Stable, 16-Valence-Electron Phosphine-Stabilized Fe Olefin Complexes and Their Reactivity

    Benjamin Burcher, Kevin J Sanders, Ladislav Benda, Guido Pintacuda, Erwann Jeanneau, Andreas A. Danopoulos, Pierre Braunstein, Hélène Olivier-Bourbigou, Pierre-Alain Breuil
    Organometallics, 2017, 36 (3), pp.605-613. ⟨10.1021/acs.organomet.6b00803⟩ | Publiée le 1 janvier 2017
    Article dans une revue

    The use of the dialkene divinyltetramethyldisiloxane (dvtms) allows easy access to the reactive 16-valence-electron complexes [Fe-0 (L-L(dvtms)] (L-L = dppe (1,2-bis-(diphenylphosphino)ethane; 1), dppp (1,2-bis(diphenylphOsphino)-propane; 2), pyNMe:P('Pr)(2) (N-(diisopropylphosphino)-N-methylpyridin-2-amine; 4), dipe (1,2-bis(diisopropylphosphino)ethane; 5)) and [Fe-0(L)(2)(dvtms)] (L = PMe3; 3) by a mild reductive route using AlEt2(OEt) as reducing agent. In contrast, by the "same methodology, the 18-valence-electron complexes [Fe-0(L-L)2(ethylene)] (L-L = dppin (1,2-bis(diphenylphosphino)methane; 6),.dppa (1,2-bis-(diphenylphosphino)amine; 7), dppe (8)) were obtained, Which do not contain dvtms. In addition, a combined DFT and solid-state paramagnetic NMR methodology is introduced for the structure determination of 5. A comparative study of the reactivity of 1, 2, 4-6, and 8 with 3-hexyne highlights emerging mechanistic implications for C C coupling reactions using these complexes as catalysts.

  • Simultaneous Analysis of Secondary Structure and Light Scattering from Circular Dichroism Titrations: Application to Vectofusin-1

    Louic S. Vermeer, A. Marquette, M. Schoup, D. Fenard, A. Galy, B. Bechinger
    Scientific Reports, 2016, 6, pp.39450. ⟨10.1038/srep39450⟩ | Publiée le 22 décembre 2016
    Article dans une revue

    Circular Dichroism data are often decomposed into their constituent spectra to quantify the secondary structure of peptides or proteins but the estimation of the secondary structure content fails when light scattering leads to spectral distortion. If peptide-induced liposome self-association occurs, subtracting control curves cannot correct for this. We show that if the cause of the light scattering is independent from the peptide structural changes, the CD spectra can be corrected using principal component analysis (PCA). The light scattering itself is analysed and found to be in good agreement with backscattering experiments. This method therefore allows to simultaneously follow structural changes related to peptide-liposome binding as well as peptide induced liposome self-association. We apply this method to study the structural changes and liposome binding of vectofusin-1, a transduction enhancing peptide used in lentivirus based gene therapy. Vectofusin-1 binds to POPC/POPS liposomes, causing a reversal of the negative liposome charge at high peptide concentrations. When the peptide charges exactly neutralise the lipid charges on both leaflets reversible liposome self-association occurs. These results are in good agreement with biological observations and provide further insight into the conditions required for efficent transduction enhancement.

  • Allopregnanolone and its analog BR 297 rescue neuronal cells from oxidative stress-induced death through bioenergetic improvement

    Imane Lejri, Amandine Grimm, Michel Miesch, Philippe Geoffroy, Anne Eckert, Ayikoe-Guy Mensah-Nyagan
    Biochimica et Biophysica Acta - Molecular Basis of Disease, 2016, 1863 (3), pp.631 - 642. ⟨10.1016/j.bbadis.2016.12.007⟩ | Publiée le 13 décembre 2016
    Article dans une revue

    Allopregnanolone (AP) is supposed to exert beneficial actions including anxiolysis, analgesia, neurogenesis and neuroprotection. However, although mitochondrial dysfunctions are evidenced in neurodegenerative diseases, AP actions against neurodegeneration-induced mitochondrial deficits have never been investigated. Also, the therapeutic exploitation of AP is limited by its difficulty to pass the liver and its rapid clearance after sulfation or glucuronidation of its 3-hydroxyl group. Therefore, the characterization of novel potent neuroprotective analogs of AP may be of great interest. Thus, we synthesized a set of AP analogs (ANS) and investigated their ability to counteract APP-overexpression-evoked bioenergetic deficits and to protect against oxidative stress-induced death of control and APP-transfected SH-SY5Y cells known as a reliable cellular model of Alzheimer's disease (AD). Especially, we examined whether ANS were more efficient than AP to reduce mitochondrial dysfunctions or bioenergetic decrease leading to neuronal cell death. Our results showed that the ANS BR 297 exhibits notable advantages over AP with regards to both protection of mitochondrial functions and reduction of oxidative stress. Indeed, under physiological conditions, BR 297 does not promote cell proliferation but efficiently ameliorates the bioenergetics by increasing cellular ATP level and mitochondrial respiration. Under oxidative stress situations, BR 297 treatment, which decreases ROS levels, improves mitochondrial respiration and cell survival, appears more potent than AP to protect control and APP-transfected cells against H2O2-induced death. Our findings lend further support to the neuroprotective effects of BR 297 emphasizing this analog as a promising therapeutic tool to counteract age- and AD-related bioenergetic deficits.

  • Hexa- and Octanuclear Heterometallic Clusters with Copper–, Silver–, or Gold–Molybdenum Bonds and d10–d10 Interactions

    Pierre Croizat, Sabrina Sculfort, Richard Welter, Pierre Braunstein
    Organometallics, 2016, 35 (23), pp.3949-3958. ⟨10.1021/acs.organomet.6b00745⟩ | Publiée le 12 décembre 2016
    Article dans une revue

    A comparative study of the reactivity of the carbonylmetalates {m}− = [MoCp(CO)3]− (Cp = η5-C5H5) and [Mo(η5-C5H4NMe2)(CO)3]− toward d10 complexes of the group 11 metals, [Cu(NCMe)4](BF4), AgBF4 and [N(n-Bu)4][AuBr2], has allowed the characterization of new heterometallic hexa- and octanuclear clusters with the same general formula [M{m}]n (M = Cu, Ag, Au). In these cyclic oligomers, the value of n depends of the coinage metal. Thus, the hexanuclear cluster [Cu3{Mo(η5-C5H4NMe2)(CO)3}3] (17) has a planar metal core, formed by a copper triangle with edge-bridging molybdenum atoms. The octanuclear “star shape” clusters [Ag4{Mo(η5-C5H4NMe2)(CO)3}4] (19) and [Au4{Mo(η5-C5H4NMe2)(CO)3}4] (21) contain a square silver or gold core, respectively, edge-bridged by molybdenum atoms. In these three clusters, the 2-D raft-type structure of their metal core, which is ν2-triangular for Cu3Mo3 and of a square-in-a-square-type for the octanuclear Ag4Mo4 and Au4Mo4 clusters, allows for d10–d10 metallophilic interactions. The latter have been clearly evidenced by relatively short separations between the d10 metal centers: average Cu···Cu, Ag···Ag, and Au···Au distances of 2.617(1), 2.869(1) and 2.792(1) Å, respectively. These new carbonyl clusters are closely related to their Cp analogs previously reported and constitute a unique set of heterometallic clusters with such geometries involving group 6 and group 11 transition metals.

  • Biobased Composite Films from Chitosan and Lignin: Antioxidant Activity Related to Structure and Moisture

    Kevin Crouvisier-Urion, Philippe Bodart, Pascale Winckler, Jésus Raya, Régis D. Gougeon, Philippe Cayot, Sandra Domenek, Frédéric Debeaufort, Thomas Karbowiak
    ACS Sustainable Chemistry & Engineering, 2016, 4 (12), pp.6371 - 6381. ⟨10.1021/acssuschemeng.6b00956⟩ | Publiée le 5 décembre 2016
    Article dans une revue

    Composite films based on chitosan and lignin biopolymers were investigated for their mechanical, barrier, surface, and antioxidant properties and linked to an extensive microscopic analysis of their external and internal structure. In particular, the fluorescence properties of lignins were exploited, using two-photon microscopy, to achieve a 3D representation of its distribution within the chitosan matrix. The lignin incorporation generated small aggregates homogeneously distributed in the film. The aggregates slightly weakened the network as reflected by the mechanical properties. Lignin as an antioxidant provided to the film a radical scavenging activity, essentially governed by a surface activity mechanism. Accordingly, the film surface showed a chemical reorganization induced by the presence of lignin as highlighted by surface hydrophobicity and X-ray photoelectron spectroscopy. On the molecular scale, solid state NMR also revealed the absence of covalent bonds between lignin and chitosan and the establishment, but to a small extent, of low energy dipole dipole interactions. Finally, lignin is a promising compound for a good added-value due to radical scavenging in a chitosan matrix.

  • Antimicrobial Peptides: Mechanisms of Action and Resistance

    Burkhard Bechinger, S Gorr
    Journal of Dental Research, 2016, 96 (3), pp.254-260. ⟨10.1177/0022034516679973⟩ | Publiée le 21 novembre 2016
    Article dans une revue

    More than 40 antimicrobial peptides and proteins (AMPs) are expressed in the oral cavity. These AMPs have been organized into 6 functional groups, 1 of which, cationic AMPs, has received extensive attention in recent years for their promise as potential antibiotics. The goal of this review is to describe recent advances in our understanding of the diverse mechanisms of action of cationic AMPs and the bacterial resistance against these peptides. The recently developed peptide GL13K is used as an example to illustrate many of the discussed concepts. Cationic AMPs typically exhibit an amphipathic conformation, which allows increased interaction with negatively charged bacterial membranes. Peptides undergo changes in conformation and aggregation state in the presence of membranes; conversely, lipid conformation and packing can adapt to the presence of peptides. As a consequence, a single peptide can act through several mechanisms depending on the peptide's structure, the peptide:lipid ratio, and the properties of the lipid membrane. Accumulating evidence shows that in addition to acting at the cell membrane, AMPs may act on the cell wall, inhibit protein folding or enzyme activity, or act intracellularly. Therefore, once a peptide has reached the cell wall, cell membrane, or its internal target, the difference in mechanism of action on gram-negative and gram-positive bacteria may be less pronounced than formerly assumed. While AMPs should not cause widespread resistance due to their preferential attack on the cell membrane, in cases where specific protein targets are involved, the possibility exists for genetic mutations and bacterial resistance. Indeed, the potential clinical use of AMPs has raised the concern that resistance to therapeutic AMPs could be associated with resistance to endogenous host-defense peptides. Current evidence suggests that this is a rare event that can be overcome by subtle structural modifications of an AMP.

  • Characterization of biomass char formation investigated by advanced solid state NMR

    Yann Le Brech, Jésus Raya, Luc Delmotte, Nicolas Brosse, Roger Gadiou, Anthony Dufour
    Carbon, 2016, 108, pp.165-177. ⟨10.1016/j.carbon.2016.06.033⟩ | Publiée le 1 novembre 2016
    Article dans une revue

    Char is produced during pyrolysis of biomass and it could be valorised as soil amendment, activated carbon or to produce syngas or heat by further oxidation. The mechanisms of biochars formation have to be better understood in order to tailor their properties. For this purpose, the pyrolysis of biomass was conducted in a fixed bed reactor allowing a good control of pyrolysis conditions. Miscanthus and the macromolecules extracted from this same biomass (holocellulose, cellulose, ethanol organosolv lignin) were pyrolysed to various final temperatures (200-500 degrees C). The chemical moieties formed in the chars were studied by solid state C-13 NMR. A Cross Polarization method at the Magic Angle Spinning with Adiabatic Passage though Hartmann-Hahn conditions (CP/MAS APHH) has been found to give similar spectra than the Direct Polarization quantitative method in much shorter acquisition times. A quantitative study on the formation of aromatic structures in the network of the macromolecules in miscanthus and in the fractionated macromolecules was conducted. It is shown that below 300 degrees C xylan is the main source of aromatic formation while above this temperature the aromatization of cellulose occurs. The interactions between lignin and carbohydrates inside the network of biomass for aromatic structures formation are discussed.

  • Ultrafast Singlet Energy Transfer in Porphyrin Dyads

    Hervé Dekkiche, Antoine Buisson, Adam Langlois, Paul-Ludovic Karsenti, Laurent Ruhlmann, Pierre D. Harvey, Romain Ruppert
    Inorganic Chemistry, 2016, 55 (20), pp.10329-10336. ⟨10.1021/acs.inorgchem.6b01594⟩ | Publiée le 17 octobre 2016
    Article dans une revue

    A weakly fluorescent Pt-bridged dyad composed of zinc(II) porphyrin (Zn; donor) and free base (Fb; acceptor) has been designed and exhibits an ultrafast singlet energy transfer between porphyrins. The use of larger atoms within the central linker significantly increases the MO coupling between the two chromophores and inherently the electronic communication.

  • The obligate respiratory supercomplex from Actinobacteria

    Wei-Chun Kao, Thomas Kleinschroth, Wolfgang Nitschke, Frauke Baymann, Yashvin Neehaul, Petra Hellwig, Sebastian Richers, Janet Vonck, Michael Bott, Carola Hunte
    Biochimica biophysica acta (BBA) - Bioenergetics, 2016, BBA Bioenergetics, Volume 1857, Issue 10, pp.Pages 1705-1714. ⟨10.1016/j.bbabio.2016.07.009⟩ | Publiée le 1 octobre 2016
    Article dans une revue

    Actinobacteria are closely linked to human life as industrial producers of bioactive molecules and as human pathogens. Respiratory cytochrome bcc complex and cytochrome aa3 oxidase are key components of their aerobic energy metabolism. They form a supercomplex in the actinobacterial species Corynebacterium glutamicum. With comprehensive bioinformatics and phylogenetic analysis we show that genes for cyt bcc-aa3 supercomplex are characteristic for Actinobacteria (Actinobacteria and Acidimicrobiia, except the anaerobic orders Actinomycetales and Bifidobacteriales). An obligatory supercomplex is likely, due to the lack of genes encoding alternative electron transfer partners such as mono-heme cyt c. Instead, subunit QcrC of bcc complex, here classified as short di-heme cyt c, will provide the exclusive electron transfer link between the complexes as in C. glutamicum. Purified to high homogeneity, the C. glutamicum bcc-aa3 supercomplex contained all subunits and cofactors as analyzed by SDS-PAGE, BN-PAGE, absorption and EPR spectroscopy. Highly uniform supercomplex particles in electron microscopy analysis support a distinct structural composition. The supercomplex possesses a dimeric stoichiometry with a ratio of a-type, b-type and c-type hemes close to 1:1:1. Redox titrations revealed a low potential bcc complex (EmISP = + 160 mV, EmbL = − 291 mV, EmbH = − 163 mV, Emcc = + 100 mV) fined-tuned for oxidation of menaquinol and a mixed potential aa3 oxidase (EmCuA = + 150 mV, Ema/a3 = + 143/+317 mV) mediating between low and high redox potential to accomplish dioxygen reduction. The generated molecular model supports a stable assembled supercomplex with defined architecture which permits energetically efficient coupling of menaquinol oxidation and dioxygen reduction in one supramolecular entity.

  • Cutting-edge capillary electrophoresis characterization of monoclonal antibodies and related products

    Rabah Gahoual, Alain Beck, Emmanuelle Leize-Wagner, Yannis-Nicolas François
    Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, 2016, 1032, pp.61-78. ⟨10.1016/j.jchromb.2016.05.028⟩ | Publiée le 1 octobre 2016
    Article dans une revue

    : Out of all categories, monoclonal antibodies (mAbs), biosimilar, antibody-drug conjugates (ADCs) and Fc-fusion proteins attract the most interest due to their strong therapeutic potency and specificity. Because of their intrinsic complexity due to a large number of micro-heterogeneities, there is a crucial need of analytical methods to provide comprehensive in-depth characterization of these molecules. CE presents some obvious benefits as high resolution separation and miniaturized format to be widely applied to the analysis of bio-pharmaceuticals. CE is an effective method for the separation of proteins at different levels. capillary gel elec-trophoresis (CGE), capillary isoelectric focusing (cIEF) and capillary zone electrophoresis (CZE) have been par-ticularly relevant for the characterization of size and charge variants of intact and reduced mAbs, while CE-MS appears to be a promising analytical tool to assess the primary structure of mAbs and related products. This review will be dedicated to detail the current and state-of-the-art CE-based methods for the characterization of mAbs and related products.

  • Identification of alkyl guaiacyl dehydroabietates as novel markers of wood tar from Pinaceae in archaeological samples

    Lucile Bailly, Pierre Adam, Armelle Charrié-Duhaut, Jacques Connan
    Organic Geochemistry, 2016, 100, pp.80-88. ⟨10.1016/j.orggeochem.2016.07.009⟩ | Publiée le 1 octobre 2016
    Article dans une revue

    Resinous material from conifers from the Pinaceae family is frequently found in an archaeological context. The material was used, notably, as waterproofing agent, as adhesive or for the caulking of boats. Two main types of material can be distinguished: resin, the exudate of conifer trees, and wood tar obtained by dry distillation of wood. Molecular investigation of such material aims, notably, at developing new molecular tools for the determination of the biological and geographical origin or of the manufacturing techniques, and for the discrimination between resin and wood tar. In this context, we report the identification by synthesis of alkyl guaiacyl dehydroabietates, which occur in a series of recent and archaeological conifer wood tar samples from shipwrecks and Gallo-Roman tar preparation sites. They most likely result from the reaction of dehydroabietic acid and alkyl guaiacols, the latter being typical wood pyrolysis products formed during the preparation of wood tar. Alkyl guaiacyl dehydroabietates are therefore proposed to be specific molecular markers for conifer wood tar, allowing a clear molecular distinction between this material and resin to be made. They are also more resistant to the alteration undergone by archaeological samples than other compounds previously proposed as markers of conifer wood tar such as anhydrosugars or alkyl guaiacols.

  • Extraordinary stability of hemocyanins from L. polyphemus and E. californicum studied using infrared spectroscopy from 294 to 20 K

    Mireille Khalil, Zahia Boubegtiten-Fezoua, Nadja Hellmann, Petra Hellwig
    Physical Chemistry Chemical Physics, 2016, 18 (41), pp.28732-28739. ⟨10.1039/C6CP03510H⟩ | Publiée le 22 septembre 2016
    Article dans une revue

    Hemocyanins are large oligomeric respiratory proteins found in many arthropods and molluscs. Here we give infrared spectroscopic evidence of a high stability towards exposure to sub-zero temperatures for hemocyanins from the arthropods Limulus polyphemus and Eurypelma californicum at different pH values. Small but distinct temperature induced changes of the secondary structure were observed, but a stable core of at least 40% α-helical structure is preserved as identified in the infrared spectra obtained between 294 and 20 K. The structural changes differ in detail somewhat for the two hemocyanins, with overall fewer changes observed in the case of E. californicum. Notably, in both cases the overall changes in the α-helical content are found to be fully reversible. The small changes in the secondary structure and reversibility upon cold treatment seem to be a particular property of the two hemocyanins, since it was not observed for myoglobin studied in the same way.

  • Ultrasound assisted synthesis, characterization and electrochemical study of a tetradentate oxovanadium diazomethine complex

    Moufida Merzougui, Kamel Ouari, Jean Weiss
    Journal of Molecular Structure, 2016, 1120, pp.239-244. ⟨10.1016/j.molstruc.2016.05.046⟩ | Publiée le 1 septembre 2016
    Article dans une revue

    The oxovanadium (IV) complex “VOL” of a tetradentate Schiff base ligand derived from the condensation of diaminoethane and 2-hydroxy-1-naphthaldehyde was efficiently prepared via ultrasound irradiation and the template effect of VO(acac)2. The resulting product was characterized by elemental analysis, infrared, electronic absorption and molar conductance measurement. Single X-ray structure analysis showed that the complex is a monomeric five-coordinate with a distorted square pyramidal geometry. It crystallizes in monoclinic system having unit cell parameters a = 8.3960 (5) Å; b = 12.5533 (8) Å and c = 18.7804 (11) Å; α = γ = 90°; β = 104.843°(2), with P 21/c space group. Cyclic voltammetry of the complex, carried out on a glassy carbon (GC) electrode in DMF, showed reversible cyclic voltammograms response in the potential range 0.15–0.60 V involving a single electron redox wave VV/VIV, the diffusion coefficient is determinedusing GC rotating disk electrode. The Levich plot Ilim = f(ω1/2), was used to calculate the diffusion-convection controlled currents.

  • Multitask Imidazolium Salt Additives for Innovative Poly( l -lactide) Biomaterials: Morphology Control, Candida spp. Biofilm Inhibition, Human Mesenchymal Stem Cell Biocompatibility, and Skin Tolerance

    Clarissa M. L. Schrekker, Yuri C. A. Sokolovicz, Maria G. Raucci, Balaji S. Selukar, Joice S. Klitzke, William Lopes, Claudio A. M. Leal, Igor O. P. de Souza, Griselda B. Galland, João Henrique Z. dos Santos, Raquel S. Mauler, Moshe Kol, Samuel Dagorne, Luigi Ambrosio, Mário L. Teixeira, Jonder Morais, Richard Landers, Alexandre M. Fuentefria, Henri S. Schrekker
    ACS Applied Materials and Interfaces, 2016, 8 (33), pp.21163-21176. ⟨10.1021/acsami.6b06005⟩ | Publiée le 24 août 2016
    Article dans une revue

    Candida species have great ability to colonize and form biofilms on medical devices, causing infections in human hosts. In this study, poly(l-lactide) films with different imidazolium salt (1-n-hexadecyl-3-methylimidazolium chloride (C16MImCl) and 1-n-hexadecyl-3-methylimidazolium methanesulfonate (C16MImMeS)) contents were prepared, using the solvent casting process. Poly(l-lactide)-imidazolium salt films were obtained with different surface morphologies (spherical and directional), and the presence of the imidazolium salt in the surface was confirmed. These films with different concentrations of the imidazolium salts C16MImCl and C16MImMeS presented antibiofilm activity against isolates of Candida tropicalis, Candida parapsilosis, and Candida albicans. The minor antibiofilm concentration assay enabled one to determine that an increasing imidazolium salt content promoted, in general, an increase in the inhibition percentage of biofilm formation. Scanning electron microscopy micrographs confirmed the effective prevention of biofilm formation on the imidazolium salt containing biomaterials. Lower concentrations of the imidazolium salts showed no cytotoxicity, and the poly(l-lactide)-imidazolium salt films presented good cell adhesion and proliferation percentages with human mesenchymal stem cells. Furthermore, no acute microscopic lesions were identified in the histopathological evaluation after contact between the films and pig ear skin. In combination with the good morphological, physicochemical, and mechanical properties, these poly(l-lactide)-based materials with imidazolium salt additives can be considered as promising biomaterials for use in the manufacturing of medical devices.

  • Computational Approaches to the Chemical Equilibrium Constant in Protein-ligand Binding

    Joel Jose Montalvo Acosta, Marco Cecchini
    Molecular Informatics, 2016, 35 (11-12), pp.555-567. ⟨10.1002/minf.201600052⟩ | Publiée le 24 août 2016
    Article dans une revue

    The physiological role played by protein-ligand recognition has motivated the development of several computational approaches to the ligand binding affinity. Some of them, termed rigorous, have a strong theoretical foundation but involve too much computation to be generally useful. Some others alleviate the computational burden by introducing strong approximations and/or em- pirical calibrations, which also limit their general use. Most importantly, there is no straightforward correlation be- tween the predictive power and the level of approximation introduced. Here, we present a general framework for the quantitative interpretation of protein-ligand binding based on statistical mechanics. Within this framework, we re- derive self-consistently the fundamental equations of some popular approaches to the binding constant and pinpoint the inherent approximations. Our analysis represents a first step towards the development of variants with optimum accuracy/efficiency ratio for each stage of the drug discovery pipeline.

  • Identification of the earliest collagen- and plant-based coatings from Neolithic artefacts (Nahal Hemar cave, Israel)

    Caroline Solazzo, Blandine Courel, Jacques Connan, Bart E. van Dongen, Holly Barden, Kirsty Penkman, Sheila Taylor, Beatrice Demarchi, Pierre Adam, Philippe Schaeffer, Arie Nissenbaum, Ofer Bar-Yosef, Michael Buckley
    Scientific Reports, 2016, 6 (1), ⟨10.1038/srep31053⟩ | Publiée le 9 août 2016
    Article dans une revue

    Mortuary practices in human evolution record cognitive, social changes and technological innovations. The Neolithic Revolution in the Levant was a watershed in this domain that has long fascinated the archaeological community. Plaster modelled skulls are well known at Jericho and several other Neolithic sites, and in Nahal Hemar cave (Israel, ca. 8200 −7300 cal. BC) excavations yielded six unique human skulls covered with a black organic coating applied in a net pattern evoking a headdress. This small cave was used as storage for paraphernalia in the semi-arid area of the Judean desert and the dry conditions preserved other artefacts such as baskets coated with a similar dark substance. While previous analysis had revealed the presence of amino acids consistent with a collagen signature, in the present report, specific biomarkers were characterised using combined proteomic and lipid approaches. Basket samples yielded collagen and blood proteins of bovine origin (Bos genus) and a large sequence coverage of a plant protein charybdin (Charybdis genus). The skull residue samples were dominated by benzoate and cinnamate derivatives and triterpenes consistent with a styrax-type resin (Styrax officinalis), thus providing the earliest known evidence of an odoriferous plant resin used in combination with an animal product.

  • Colour tuning by the stepwise synthesis of mononuclear and homo- and hetero-dinuclear platinum( ii ) complexes using a zwitterionic quinonoid ligand

    Paramita Kar, Masaki Yoshida, Atsushi Kobayashi, Lucie Routaboul, Pierre Braunstein, Masako Kato
    Dalton Transactions, 2016, 45 (36), pp.14080-14088. ⟨10.1039/C6DT02328B⟩ | Publiée le 18 juillet 2016
    Article dans une revue

    The colour of a mononuclear Pt( ii ) complex bearing a [O,N,N,O] quinonoid ligand is judiciously tuned by stepwise deprotonation and successive homo- and hetero-metalation.

  • In Situ Metabolism of Cinnamyl Alcohol in Reconstructed Human Epidermis: New Insights into the Activation of This Fragrance Skin Sensitizer

    Éric Moss, Camille Debeuckelaere, Valerie Berl, Karim El Bayed, Francois-Marie Moussallieh, Izzie-Jacques Namer, Jean-Pierre Lepoittevin
    Chemical Research in Toxicology, 2016, 29 (7), pp.1172-1178. ⟨10.1021/acs.chemrestox.6b00148⟩ | Publiée le 18 juillet 2016
    Article dans une revue

    Chemical modification of epidermal proteins by skin sensitizers is the molecular event which initiates the induction of contact allergy. However, not all chemical skin allergens react directly as haptens with epidermal proteins but need either a chemical (prehaptens) or metabolic (prohaptens) activation step to become reactive. Cinnamyl alcohol has been considered a model prohapten, as this skin sensitizer has no intrinsic reactivity. Therefore, the prevailing theory is that cinnamyl alcohol is enzymatically oxidized into the protein-reactive cinnamaldehyde, which is the sensitizing agent. Knowing that reconstructed human epidermis (RHE) models have been demonstrated to be quite similar to the normal human epidermis in terms of metabolic enzymes, use of RHE may be useful to investigate the in situ metabolism/activation of cinnamyl alcohol, particularly when coupled with high-resolution magic angle spinning nuclear magnetic resonance. Incubation of carbon-13 substituted cinnamyl derivatives with RHE did not result in the formation of cinnamaldehyde. The metabolites formed suggest the formation of an epoxy-alcohol and an allylic sulfate as potential electrophiles. These data suggest that cinnamyl alcohol is inducing skin sensitization through a route independent of the one involving cinnamaldehyde and should therefore be considered as a skin sensitizer on its own.

  • Design and Synthesis of Aviram-Ratner-Type Dyads and Rectification Studies in Langmuir-Blodgett (LB) Films

    Govindasamy Jayamurugan, Vijayendran Gowri, David Hernández, Santiago Martin, Alejandro González-Orive, Cagatay Dengiz, Oliver Dumele, Francesc Pérez-Murano, Jean Paul Gisselbrecht, Corinne Boudon, W. Bernd Schweizer, Benjamin Breiten, Aaron D. Finke, Gunnar Jeschke, Bruno Bernet, Laurent Ruhlmann, Pilar Cea, François Diederich
    Chemistry - A European Journal, 2016, 22 (30), pp.10539-10547. ⟨10.1002/chem.201505216⟩ | Publiée le 1 juillet 2016
    Article dans une revue

    The design and synthesis of Aviram-Ratner-type molecular rectifiers, featuring an anilino-substituted extended tetracyanoquinodimethane (exTCNQ) acceptor, covalently linked by the -spacer bicyclo[2.2.2]octane (BCO) to a tetrathiafulvalene (TTF) donor moiety, are described. The rigid BCO spacer keeps the TTF donor and exTCNQ acceptor moieties apart, as demonstrated by X-ray analysis. The photophysical properties of the TTF-BCO-exTCNQ dyads were investigated by UV/Vis and EPR spectroscopy, electrochemical studies, and theoretical calculations. Langmuir-Blodgett films were prepared and used in the fabrication and electrical studies of junction devices. One dyad showed the asymmetric current-voltage (I-V) curve characteristic for rectification, unlike a control compound lacking the donor TTF part which gave a symmetric I-V curve. The direction of the observed rectification indicated that the preferred electron current flows from the exTCNQ acceptor to the TTF donor.

  • Chemical reactivity of graphene oxide towards amines elucidated by solid-state NMR

    Isabella Vacchi, Cinzia Spinato, Jésus Raya, Alberto Bianco, Cécilia Ménard-Moyon
    Nanoscale, 2016, 8 (28), pp.13714-13721. ⟨10.1039/c6nr03846h⟩ | Publiée le 22 juin 2016
    Article dans une revue

    Graphene oxide (GO) is an attractive nanomaterial for many applications. Controlling the functionalization of GO is essential for the design of graphene-based conjugates with novel properties. But, the chemical composition of GO has not been fully elucidated yet. Due to the high reactivity of the oxygenated moieties, mainly epoxy, hydroxyl and carboxyl groups, several derivatization reactions may occur concomitantly. The reactivity of GO with amine derivatives has been exploited in the literature to design graphene-based conjugates, mainly through amidation. However, in this study we undoubtedly demonstrate using magic angle spinning (MAS) solid-state NMR that the reaction between GO and amine functions occurs via ring opening of the epoxides, and not by amidation. We also prove that there is a negligible amount of carboxylic acid groups in two GO samples obtained by a different synthesis process, hence eliminating the possibility of amidation reactions with amine derivatives. This work brings additional insights into the chemical reactivity of GO, which is fundamental to control its functionalization, and highlights the major role of MAS NMR spectroscopy for a comprehensive characterization of derivatized GO.

  • Metal Linkage Effects on Ultrafast Energy Transfer

    Hervé Dekkiche, Antoine Buisson, Adam Langlois, Paul-Ludovic Karsenti, Laurent Ruhlmann, Romain Ruppert, Pierre Harvey
    Chemistry - A European Journal, 2016, 22 (30), pp.10484-10493. ⟨10.1002/chem.201601322⟩ | Publiée le 22 juin 2016
    Article dans une revue

    We report the preparation of several new porphyrin homodimers bridged by a platinum(II) ion in which very intense electronic communication through the coordination link occurs. Moreover, the synthesis of a new porphyrin dyad and its photophysical properties are reported. This dyad exhibits the fastest singlet energy transfer ever reported for synthetic systems between a zinc(II) porphyrin and a porphyrin free base. This extremely fast transfer (∼100 femtoseconds) is in the same range as the fastest one measured in natural systems. This feature is due to the platinum(II) linker, which allows for strong MO couplings between the two porphyrin units as experimentally supported by electrochemistry and corroborated by DFT computations.

  • Paramagnetic Molecular Grippers: The Elements of Six-State Redox Switches

    Jovana Milić, Michal Zalibera, Igor Pochorovski, Nils Trapp, Julia Nomrowski, Dmytro Neshchadin, Laurent Ruhlmann, Corinne Boudon, Oliver Wenger, Anton Savitsky, Wolfgang Lubitz, Georg Gescheidt, François Diederich
    Journal of Physical Chemistry Letters, 2016, 7 (13), pp.2470-2477. ⟨10.1021/acs.jpclett.6b01094⟩ | Publiée le 17 juin 2016
    Article dans une revue

    <div><p>We analyzed their electronic, conformational, and binding properties by a combined methodological approach involving cyclic/square-wave voltammetry, EPR spectroscopy, UV-Vis spectroelectrochemistry, luminescence, and transient absorption spectroscopy, complemented by DFT calculations. This study demonstrated the utility of UV-Vis spectroelectrochemistry and EPR spectroscopy in evaluating the cavitand conformational features. Moreover, binding properties of the cavitands were more pronounced in the SQ as compared to the quinone (Q) or the hydroquinone (HQ) states. These paramagnetic SQ intermediates thereby open the way to the development of six-state redox switches with two conformations (open and closed) in three redox states (Q, SQ, and HQ) of distinct binding ability, whose switchable magnetic properties and responsiveness to electrical stimuli can lead to powerful molecular devices in the future. TOC GRAPHICS KEYWORDS supramolecular chemistry, photoredox switch, host-guest chemistry, cavitands, molecular grippers.</p><p>Nanodevices that are able to perform controlled motion, 1-3 such as molecular grippers, 4-6 are particularly appealing when having the ability to expand and contract in response to external stimuli. This behavior renders them interesting for applications as transporters, 7,8 sensors, 1-3,9-15 nanoreactors, 4-6,14,16-22 or elements in nanorobotics. 4,7,8,23-25 One of the most suitable platforms to</p></div>

  • Gold(I)-Catalyzed N-Desulfonylative Amination versus N-to-O 1,5-Sulfonyl Migration: a Versatile Access to 1-Azabicycloalkanes

    Solène Miaskiewicz, Boris Gaillard, Nicolas Kern, Jean‐marc Weibel, Patrick Pale, Aurélien Blanc
    Angewandte Chemie International Edition, 2016, 55 (31), pp.9088-9092. ⟨10.1002/anie.201604329⟩ | Publiée le 16 juin 2016
    Article dans une revue

    Abstract Valuable 1‐azabicycloalkane derivatives have been synthesized through a novel gold(I)‐catalyzed desulfonylative cyclization strategy. An ammoniumation reaction of ynones substituted at the 1‐position with an N ‐sulfonyl azacycle took place in the presence of a gold cation by intramolecular cyclization of the disubstituted sulfonamide moiety onto the triple bond. Depending on the size of the heterocyclic ring and substitution of the substrates, two unprecedented forms of nucleophilic attack on the sulfonyl group were exploited, that is, a N‐desulfonylation in the presence of an external protic O nucleophile (37–87 %, 10 examples) and a unique N‐to‐O 1,5‐sulfonyl migration (60–98 %, 9 examples).

  • Novel analogs of allopregnanolone show improved efficiency and specificity in neuroprotection and stimulation of proliferation.

    Mona Karout, Michel Miesch, Philippe Geoffroy, Stephanie Kraft, Hans-Dieter Hofmann, Ayikoé-Guy Mensah-Nyagan, Matthias Kirsch
    Journal of Neurochemistry, 2016, 139 (5), pp.782-794. ⟨10.1111/jnc.13693⟩ | Publiée le 3 juin 2016
    Article dans une revue

    The natural neurosteroid allopregnanolone exerts beneficial effects in animal models of neurodegenerative diseases, nervous system injury and peripheral neuropathies. It not only has anti-apoptotic activity, but also promotes proliferation of progenitor cells. With respect to using it as a therapeutic tool, such pleiotropic actions might create unwanted side effects. Therefore, we have synthesized allopregnanolone analogs and analyzed their neuroprotective and proliferative effects to identify compounds with higher efficiency and less ambiguous biological actions. Proliferation-promoting effects of 3α and 3β isomers of 3-O-allyl-allopregnanolone and 12 oxo-allopregnanolone were studied in adult subventricular zone stem cell cultures and in primary hippocampal cultures by measuring 5-ethynyl-2'-deoxyuridine incorporation. Neuroprotective activity against amyloid beta 42-induced cell death was determined by quantifying caspase 3/7 activity. The 3α isomers significantly stimulated proliferation in all culture systems, whereas the 3β isomers were ineffective. The stimulatory effect of 3α-O-allyl-allopregnanolone was significantly higher than that of allopregnanolone. In neural stem cell cultures, 3α-O-allyl-allopregnanolone specifically enhanced proliferation of Nestin-positive progenitors. In addition, it promoted the differentiation of doublecortin-positive neurons. In neural stem cell cultures treated with amyloid beta 42, both the α and β isomers of O-allyl- allopregnanolone showed increased neuroprotective activity as compared to allopregnanolone, completely preventing amyloid-induced caspase 3/7 activation. The 12 oxo-allopregnanolone analogs were ineffective. These results identify structural allopregnanolone analogs with higher anti-apoptotic and proliferation-promoting activity than the natural neurosteroid. Interestingly, stereoisomers of the analogs were found to have distinct profiles of activity raising the possibility of exploiting the neuroprotective properties of neurosteroids with or without simultaneously stimulating neurogenesis. Cover Image for this issue: doi: 10.1111/jnc.13344.

  • Synthesis of Dicyano‐Substituted Benzo[c]fluorenes from Tetraaryl[3]cumulenes

    Przemyslaw Gawel, Elias Halabi, David Schweinfurth, Nils Trapp, Laurent Ruhlmann, Corinne Boudon, François Diederich
    European Journal of Organic Chemistry, 2016, 2016 (17), pp.2919-2924. ⟨10.1002/ejoc.201600470⟩ | Publiée le 30 mai 2016
    Article dans une revue

    We have developed a one‐step synthesis of 5,6‐dicyano‐7‐(diphenylvinyl)‐7 H ‐benzo[ c ]fluorenes, starting from easily accessible tetraaryl[3]cumulenes and 2,3‐dichloro‐5,6‐dicyano‐1,4‐benzoquinone (DDQ). In the proposed mechanism, this transformation is initiated by single‐electron transfer from the cumulene to DDQ with subsequent ring closure. In the next step, [4+2] cycloaddition of an additional DDQ molecule is followed by transformation of the formed cycloadducts, which provides new 5,6‐dicyanobenzo[ c ]fluorene derivatives in fair to good yields. Isolated intermediates and time‐resolved EPR spectroscopy measurements support our mechanistic proposal. Furthermore, X‐ray crystallographic proof for the postulated structures as well as for the reaction intermediates is provided. The optoelectronic properties of these new chromophores were derived from UV/Vis spectroscopy, electrochemical, and computational studies. Additionally, the aromaticity of the new polycyclic aromatic backbone was analyzed by using nucleus‐independent chemical shift (NICS)‐ XY ‐scans.

  • Synthesis of Optically Active Polystyrene Catalyzed by Monophosphine Pd Complexes

    Matthieu Jouffroy, Dominique Armspach, Dominique Matt, Kohtaro Osakada, Daisuke Takeuchi
    Angewandte Chemie International Edition, 2016, 55 (29), pp.8367-8370. ⟨10.1002/anie.201603191⟩ | Publiée le 24 mai 2016
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    Abstract: Cationic PdII monophosphine complexes derived from a- and b-cyclodextrins (CDs) promote the homopolymerization of styrene under carbon monoxide pressure. Although reversible CO coordination takes place under catalytic conditions according to 13C NMR studies with 13Cenriched CO, both complexes catalyze the formation of COfree styrene polymers. These macromolecules display optical activity as a result of the presence of stereoregular sequences within the overall atactic polymer.

  • Deprotonation of Al2Me6 by Sterically Bulky NHCs

    Gilles Schnee, David Specklin, Jean-Pierre Djukic, Samuel Dagorne
    Organometallics, 2016, 35 (11), pp.1726-1734. ⟨10.1021/acs.organomet.6b00159⟩ | Publiée le 17 mai 2016
    Article dans une revue

    The sterically bulky NHCs 1,3-di-tert-butylimidazol-2-ylidene (ItBu), 1,3-di-tert-butylimidazolin-2-ylidene (StBu), and 1,3-di-tert-butyl-3,4,5,6-tetrahydripyrimidin-2-ylidene (C6-tBu) readily react with excess Al2Me6 at room temp. to form salts 2, 3, and 4, resp., consisting of the polynuclear Me3Al(μ3-CH2)(AlMe2)2(μ2-CH3)- anion assocd. with either the cation ItBu-H+, StBu-H+, or C6-tBu-H+. Such a reaction involving the deprotonation of an Al2Me6 moiety by a NHC does not proceed with less sterically hindered NHCs such as 1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene (IDipp) and 1,3-bis(2,4,6-trimethylphenyl)imidazol-2-ylidene (IMes), for which only the classical Lewis pair adducts (NHC)AlMe3 were isolated. In line with exptl. and d. functional theory (DFT) calcns. data, such reactivity thus appears to be driven by steric frustration, resulting in the destabilization of the corresponding (NHC)AlMe3 adducts, then more prone to dissoc. and hence allowing Al2Me6 activation/deprotonation. The DFT-estd. profile of the reaction of model adduct (ItBu)AlMe3 (I) with Al2Me6 agrees with a ready adduct dissocn. at low energy cost, with a subsequent deprotonation of Al2Me6 by the NHC fragment to afford model salt [Me3Al(μ3-CH2)(AlMe2)2(μ2-CH3)]-[ItBu-H]+ (II, isostructural to salt 2). Anion Me3Al(μ3-CH2)(AlMe2)2(μ2-CH3)- behaves as an efficient CH22- group transfer agent with the methylenation of aldehydes and ketones to afford the corresponding methylene orgs. in good conversions. Bonding anal. of the latter anion agrees with an enhanced nucleophilicity of the Al-CH2 moiety (compared to the Al-Me groups), in line with the obsd. reactivity. DFT calcns. also allowed a detailed bonding description of the pentacoordinate methylene C in the anion Me3Al(μ3-CH2)(AlMe2)2(μ2-CH3)-. [on SciFinder(R)]

  • Single-Molecule Magnet Behavior of Individual Polyoxometalate Molecules Incorporated within Biopolymer or Metal-Organic Framework Matrices

    William Salomon, Yanhua Lan, Eric Rivière, Shu Yang, Catherine Roch-Marchal, Anne Dolbecq, Corine Simonnet-Jégat, Nathalie Steunou, Nathalie Leclerc-Laronze, Laurent Ruhlmann, Talal Mallah, Wolfgang Wernsdorfer, Pierre Mialane
    Chemistry - A European Journal, 2016, 22 (19), pp.6564-6574. ⟨10.1002/chem.201600202⟩ | Publiée le 4 mai 2016
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  • Four Gadolinium(III) Complexes Appended to a Porphyrin: A Water-Soluble Molecular Theranostic Agent with Remarkable Relaxivity Suited for MRI Tracking of the Photosensitizer

    Angélique Sour, Sébastien Jenni, Ana Ortí-Suárez, Julie Schmitt, Valérie Heitz, Frédéric Bolze, Paulo Loureiro de Sousa, Chrystelle Po, Célia S. Bonnet, Agnès Pallier, Éva Tóth, Barbara Ventura
    Inorganic Chemistry, 2016, 55 (9), pp.4545 - 4554. ⟨10.1021/acs.inorgchem.6b00381⟩ | Publiée le 2 mai 2016
    Article dans une revue

    A molecular theranostic agent for magnetic resonance imaging (MRI) and photodynamic therapy (PDT) consisting of four [GdDTTA]− complexes (DTTA4− = diethylenetriamine-N,N,N″,N″-tetraacetate) linked to a meso-tetraphenylporphyrin core, as well as its yttrium(III) analogue, was synthesized. A variety of physicochemical methods were used to characterize the gadolinium(III) conjugate 1 both as an MRI contrast agent and as a photosensitizer. The proton relaxivity measured in H2O at 20 MHz and 25 °C, r1 = 43.7 mmol–1 s–1 per gadolinium center, is the highest reported for a bishydrated gadolinium(III)-based contrast agent of medium size and can be related to the rigidity of the molecule. The complex displays also a remarkable singlet oxygen quantum yield of ϕΔ = 0.45 in H2O, similar to that of a meso-tetrasulfonated porphyrin. We also evidenced the ability of the gadolinium(III) conjugate to penetrate in cancer cells with low cytotoxicity. Its phototoxicity on Hela cells was evaluated following incubation at low micromolar concentration and moderate light irradiation (21 J cm–2) induced 50% of cell death. Altogether, these results demonstrate the high potential of this conjugate as a theranostic agent for MRI and PDT.

  • Combining linear interpolation with extrapolation methods in range-separated ensemble density functional theory

    Bruno Senjean, Erik Hedegård, Md. Mehboob Alam, Stefan Knecht, Emmanuel Fromager
    Molecular Physics, 2016, 114 (7-8), pp.968-981. ⟨10.1080/00268976.2015.1119902⟩ | Publiée le 17 avril 2016
    Article dans une revue

    The combination of a recently proposed linear interpolation method (LIM) [Senjean et al., Phys. Rev. A 92, 012518 (2015)], which enables the calculation of weight-independent excitation energies in range-separated ensemble density-functional approximations, with the extrapolation scheme of Savin [J. Chem. Phys. 140, 18A509 (2014)] is presented in this work. It is shown that LIM excitation energies vary quadratically with the inverse of the range-separation parameter mu when the latter is large. As a result, the extrapolation scheme, which is usually applied to long-range interacting energies, can be adapted straightforwardly to LIM. This extrapolated LIM (ELIM) has been tested on a small test set consisting of He, Be, H2 and HeH+. Relatively accurate results have been obtained for the first singlet excitation energies with the typical mu=0.4 value. The improvement of LIM after extrapolation is remarkable, in particular for the doubly-excited 2^1Sigma+g state in the stretched H2 molecule. Three-state ensemble calculations in H2 also show that ELIM does not necessarily improves relative excitation energies, even though individual excitation energies are more accurate after extrapolation. Finally, an alternative decomposition of the short-range ensemble exchange-correlation energy is proposed in order to correct for ghost-interaction errors in multideterminant range-separated ensemble density-functional theory calculations. The implementation and calibration of such a scheme is currently in progress.

  • Iminosugar-Cyclopeptoid Conjugates Raise Multivalent Effect in Glycosidase Inhibition at Unprecedented High Levels

    Mathieu Lepage, Jérémy Schneider, Anne Bodlenner, Alessandra Meli, Francesco De riccardis, Marjorie Schmitt, Céline Tarnus, Nha-Thi Nguyen-Huynh, Yannis-Nicolas François, Emmanuelle Leize-Wagner, Catherine Birck, Alexandra Cousido-Siah, Alberto D. Podjarny, Irene Izzo, Philippe Compain
    Chemistry - A European Journal, 2016, 22 (15), pp.5151-5155. ⟨10.1002/chem.201600338⟩ | Publiée le 4 avril 2016
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  • Ligand Control of the Metal Coordination Sphere: Structures, Reactivity and Catalysis

    Andreas A. Danopoulos, Pierre Braunstein
    Oil & Gas Science and Technology - Revue d'IFP Energies nouvelles, 2016, 71 (2), pp.24. ⟨10.2516/ogst/2015047⟩ | Publiée le 1 mars 2016
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    Two major aspects of coordination/organometallic chemistry are discussed in this article: (i) the use of functional chelating ligands to stabilize metal complexes while allowing easy stereodifferentiation within the coordination sphere and (ii) the choice of suitable ligands to stabilize challenging ‘underligated’ metal complexes with electronically highly unsaturated metal centres, thus potentially displaying unusual reactivity. In both cases, the relevance to homogeneous catalysis will be discussed.

  • Coinage metal complexes with bridging hybrid phosphine–NHC ligands: synthesis of di- and tetra-nuclear complexes

    Thomas Simler, Pierre Braunstein, Andreas Danopoulos
    Dalton Transactions, 2016, 45 (12), pp.5122-5139. ⟨10.1039/C6DT00275G⟩ | Publiée le 11 février 2016
    Article dans une revue

    A series of P–NHC-type hybrid ligands containing both PR2 and N-heterocyclic carbene (NHC) donors on meta-bis-substituted phenylene backbones, LCy, LtBu and LPh (R = Cy, tBu, Ph, respectively), was accessed through a modular synthesis from a common precursor, and their coordination chemistry with coinage metals was explored and compared. Metallation of LPh·n(HBr) (n = 1, 2) with Ag2O gave the pseudo-cubane [Ag4Br4(LPh)2], isostructural to [Ag4Br4(LR)2] (R = Cy, tBu) (T. Simler, P. Braunstein and A. A. Danopoulos, Angew. Chem., Int. Ed., 2015, 54, 13691), whereas metallation of LR·HBF4 (R = Ph, tBu) led to the dinuclear complexes [Ag2(LR)2](BF4)2 which, in the solid state, feature heteroleptic Ag centres and a ‘head-to-tail’ (HT) arrangement of the bridging ligands. In solution, interconversion with the homoleptic ‘head-to-head’ (HH) isomers is facilitated by ligand fluxionality. ‘Head-to-tail’ [Cu2Br2(LR)2] (R = Cy, tBu) dinuclear complexes were obtained from LR·HBr and [Cu5(Mes)5], Mes = 2,4,6-trimethylphenyl, which also feature bridging ligands and heteroleptic Cu centres. Although the various ligands LR led to structurally analogous complexes for R = Cy, tBu and Ph, the rates of dynamic processes occurring in solution are dependent on R, with faster rates for R = Ph. Transmetallation of both NHC and P donor groups from [Ag4Br4(LtBu)2] to AuI by reaction with [AuCl(THT)] (THT = tetrahydrothiophene) led to LtBu transfer and to the dinuclear complex [Au2Cl2LtBu] with one LtBu ligand bridging the two Au centres. Except for the silver pseudo-cubanes, all other complexes do not exhibit metallophilic interactions.

  • Disclosing the Ligand- and Solvent-Induced Changes on the Spin Transition and Optical Properties of Fe(II)-Indazolylpyridine Complexes

    Sergi Vela, Christophe Gourlaouen, Maria Fumanal, Jordi Ribas-Arino
    Magnetochemistry, 2016, 2 (1), pp.6. ⟨10.3390/magnetochemistry2010006⟩ | Publiée le 5 février 2016
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    The family of the spin crossover (SCO) compounds based on the 1-bpp unit has furnished striking examples of how subtle changes in the crystal packing have important consequences in their spin transition. Small modifications of the 1-bpp unit itself have been recently reported, obtaining the indazolyl and pirazolyl derivatives [FeII(1-bip)]2+ (1, 1-bip = 2,6-bis(indazol-1-yl)pyridine), [FeII(1,2-bip)]2+ (2, 1,2-bip = 2-(indazol-1-yl)-6-(indazol-2-yl)pyridine), [FeII(2-bip)]2+ (3, 2-bip = 2,6-bis(indazol-2-yl)pyridine), [FeII(1-ipp)]2+ (4, 1-ipp = 2-(indazol-1-yl)-6-(pyrazol-1-yl)pyridine) and [FeII(2-ipp)]2+ (5, 2-ipp = 2-(indazol-2-yl)-6-(pyrazol-1-yl)pyridine). In this work we study the consequences of a change in the ligand structure and solvent on the SCO of 1–5. More specifically, we demonstrate that their different behavior is not due to an intraligand H ̈ ̈ ̈H contact, as suggested experimentally, but to an unfavorable arrangement of the FeN6 core that some of the ligands might create, which destabilizes their Low Spin (LS) state structure and, thus, alters the transition temperature. Further, by means of solid state calculations, we disclose the effect of the solvent on the structure and crystal cohesion of the crystals. Finally, we analyze the emission and adsorption properties of 1–5, with special interest in the evolution of the absorption spectroscopy of the ligands upon complexation, and its relation with the spin multiplicity of the iron ion.

  • Influence of steric hindrance on the molecular packing and the anchoring of quinonoid zwitterions on gold surfaces

    Minghui Yuan, Iori Tanabe, Jean-Marie Brenard-Schaaf, Qin-Yin Shi, Vicki Schlegel, Rachel Schurhammer, Peter A. Dowben, Bernard Doudin, Lucie Routaboul, Pierre Braunstein
    New Journal of Chemistry, 2016, 40 (7), pp.5782-5796. ⟨10.1039/C5NJ03251B⟩ | Publiée le 5 février 2016
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    Driven by the huge potential of engineering the molecular band offset with highly dipolar molecules for improving charge injection into organic electrics, the anchoring of various N-alkyl substituted quinonoid zwitterions of formula image file: c5nj03251b-t1.tif (R = iPr, Cy, CH2CH(Et)CH2CH2CH2CH3,…) on gold surfaces is studied. The N–Au interactions result in an orthogonal arrangement of the zwitterions cores with respect to the surface, and stabilize adsorbed compact rows of molecules. IR spectroscopy is used as a straightforward diagnostic tool to validate the presence of ultra-thin molecular films. When combined with computational studies, IR measurements indicate that the presence of a CH2 group in α position to the nitrogen atom is important for a successful anchoring through N–Au interactions. The presence of such a flexible CH2 spacer, or of aryl groups, enables π-interactions with the surface, making possible the anchoring of enantiopure or sterically-hindered zwitterions. X-ray diffraction analyses indicate that the intermolecular spacing within a row of molecules can be modulated by the nature of the alkyl substituent R. This modulation is directly relevant to the electronic properties of the corresponding molecular films since these zwitterions are expected to form rows on gold surfaces similar to those observed in the bulk crystalline state.

  • Transition metal (Rh and Fe) complexes and main-group (Se and B) adducts with N,N′-diphosphanyl NHC ligands: a study of stereoelectronic properties

    Pengfei Ai, Andreas A Danopoulos, Pierre Braunstein
    Dalton Transactions, 2016, 45 (11), pp.4771 - 4779. ⟨10.1039/c6dt00318d⟩ | Publiée le 3 février 2016
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    Attempts to evaluate experimentally the donor characteristics of the N,N'-bis(di-tert-butylphosphanyl)imidazole-2-ylidene (PC NHC P) hybrid ligand are described. Thus, reactions of PC NHC P with [Rh(µ-Cl) (COD)] 2 and [Rh(µ-Cl)(CO) 2 ] 2 led to the formation of the mononuclear and dinuclear complexes, [Rh (PC NHC P,κP,κC NHC ) 2 ]Cl (PC NHC P-RhCl) and [Rh(CO)(PC NHC ,κP,κC NHC ,κN)] 2 (PC NHC -RhCO), respectively, the latter resulting after in situ cleavage of one (t-Bu) 2 P-N imid bond of PC NHC P. With ligands acting as a P,C-chelate, a straightforward evaluation of the Tolman electronic parameter (TEP) of the C NHC donor is problematical; the viability of dangling P-and bound C NHC -donors (i.e. κC NHC ) has been observed in the trinuclear Fe(II) chain complex [Fe 3 Cl 2 (μ-Cl) 4 (THF) 2 (PC NHC P,κC NHC ) 2 ] (PC NHC P-Fe), obtained by the reaction of PC NHC P with [Fe 4 Cl 8 (THF) 6 ] and, recently, established on Cr II , Co II and Au I centres. Evaluation of the π-accepting properties of the PC NHC P (and the related Dipp-PC NHC ) was based on the 77 Se NMR chemical shifts of the corresponding NHC-Se adducts, PC NHC P-Se (and Dipp-PC NHC -Se), which were</p><p>prepared from the free PC NHC P (and Dipp-PC NHC ) and Se. The π-acidity of PC NHC P is found to be higher than that of Dipp-PC NHC but lower than that of SIPr. The donor ability of the C NHC in PC NHC P was explored by its reaction with the Lewis acids tris( pentafluorophenyl)borane (B(C 6 F 5 ) 3 ) and tris ( pentafluorophenyl)boroxine ([(C 6 F 5 )BO] 3 ), which resulted in stable donor-acceptor adducts with no FLP reactivity. The steric properties of PC NHC P and Dipp-PC NHC are conformation dependent, with the percent buried volume (%V bur ) of PC NHC P in the structurally characterised conformer calculated at 67.6, the largest value currently reported for NHC ligands.

  • Energetics of Photoinduced Charge Migration within the Tryptophan Tetrad of an Animal (6–4) Photolyase

    Fabien Cailliez, Pavel Müller, Thiago Firmino, Pascal Pernot, Aurelien de La Lande
    Journal of the American Chemical Society, 2016, 138 (6), pp.1904-1915. ⟨10.1021/jacs.5b10938⟩ | Publiée le 2 février 2016
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    Cryptochromes and photolyases are flavoproteins that undergo cascades of electron/hole transfers after excitation of the flavin cofactor. It was recently discovered that animal (6–4) photolyases, as well as animal cryptochromes, feature a chain of four tryptophan residues, while other members of the family contain merely a tryptophan triad. Transient absorption spectroscopy measurements on Xenopus laevis (6–4) photolyase have shown that the fourth residue is effectively involved in photoreduction but at the same time could not unequivocally ascertain the final redox state of this residue. In this article, polarizable molecular dynamics simulations and constrained density functional theory calculations are carried out to reveal the energetics of charge migration along the tryptophan tetrad. Migration toward the fourth tryptophan is found to be thermodynamically favorable. Electron transfer mechanisms are sought either through an incoherent hopping mechanism or through a multiple sites tunneling process. The Jortner–Bixon formulation of electron transfer (ET) theory is employed to characterize the hopping mechanism. The interplay between electron transfer and relaxation of protein and solvent is analyzed in detail. Our simulations confirm that ET in (6–4) photolyase proceeds out of equilibrium. Multiple site tunneling is modeled with the recently proposed flickering resonance mechanism. Given the position of energy levels and the distribution of electronic coupling values, tunneling over three tryptophan residues may become competitive in some cases, although a hopping mechanism is likely to be the dominant channel. For both reactive channels, computed rates are very sensitive to the starting protein configuration, suggesting that both can take place and eventually be mixed, depending on the state of the system when photoexcitation takes place.

  • Palladium–benzodiazepine derivatives as promising metallodrugs for the development of antiepileptic therapies

    Walleska Bismaida Zacarias Galvão Barros, Allysson Haide Queiroz da Silva, Ana Soraya Lima Barbosa, Ábner Magalhães Nunes, José Rui Machado Reys, Heitor Gomes de Araújo-Filho, Jullyana de Souza Siqueira Quintans, Lucindo José Quintans-Júnior, Michel Pfeffer, Valéria Rodrigues dos Santos Malta, Mario Roberto Meneghetti
    Journal of Inorganic Biochemistry, 2016, 155, pp.129-135. ⟨10.1016/j.jinorgbio.2015.11.024⟩ | Publiée le 1 février 2016
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    We synthesized two organometallic diazepam–palladium(II) derivatives by C–H activation of diazepam (DZP) with palladium salts, i.e., PdCl2 and Pd(OAc)2 (OAc = acetate). Both compounds obtained are air stable and were isolated in good yields. The anticonvulsant potential of the complexes, labeled [(DZP)PdCl]2 and [(DZP)PdOAc]2, was evaluated through two animal models: pentylenetetrazole (PTZ)- and picrotoxin (PTX)-induced convulsions. The organometallic DZP–palladium(II) acetate complex, [(DZP)PdOAc]2, significantly increased (p b 0.01 or p b 0.001) latencies and protected the animals against convulsions induced by PTZ and PTX, while the analogous chloro derivative, [(DZP)PdCl]2, was effective (p b 0.01) only in the PTZ model. These effects appear to be mediated through the GABAergic system. The possible mechanism of action of the DZP–palladium(II) complexeswas also confirmedwith the use of flumazenil (FLU), a GABAA-benzodiazepine receptor complex site antagonist. Herein,we present the first report of the anticonvulsant properties of organometallic DZP–palladium(II) complexes as well as evidence that these compounds may play an important role in the study of new drugs to treat patients with epilepsy.

  • Novel Di- and Trinuclear Palladium Complexes Supported byN,N′‑Diphosphanyl NHC Ligands and N,N′‑Diphosphanylimidazolium Palladium, Gold, and Mixed-Metal Copper−Gold Complexes

    Pengfei Ai, Christophe Gourlaouen, Andreas Danopoulos, Pierre Braunstein
    Inorganic Chemistry, 2016, 55 (3), pp.1219-1229. ⟨10.1021/acs.inorgchem.5b02382⟩ | Publiée le 1 février 2016
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    The reaction of the trinuclear complex [Ag3(μ3-PC(NHC)P,κP,κC(NHC),κP)2](OTf)3 (Ag3; PC(NHC)P = N,N'-bis(di-tert-butylphosphanyl)imidazol-2-ylidene) with [Pd(dba)2] afforded the trinuclear palladium complex [Pd3(μ3-PC(NHC)P,κP,κC(NHC),κP)2](OTf)2 (Pd3) and the dinuclear palladium(I) complex [Pd2(μ2-PC(NHC)P,κP,κC(NHC),κP)2](OTf)2 (Pd2). The assignment of the oxidation state of the metals in the mixed-valence Pd3 chain as Pd(0)-Pd(II)-Pd(0) was based on the reactivity of the complex with 2,6-dimethylphenyl isocyanide and density functional theory calculations. Reaction of PCNHCP with [PdMe2(tmeda)] afforded the palladium(II) complex [PdMe2(PC(NHC)P,κP,κC(NHC))] (Pd-Me2), with PC(NHC)P acting as a bidentate ligand. The reaction of PC(NHC)P with [Pd(dba)2] led to a dinuclear palladium(0) complex [Pd2(μ2-PC(NHC)P,κP,κC(NHC),κP)](dba) (Pd2-dba); attempted replacement of the remaining dba by PC(NHC)P failed. The imidazolium triflate PCHP, precursor to PC(NHC)P, was reacted with [Pd2(dba)3]·CHCl3 to give the (2 + 2) metalla-mesocyclic cationic palladium(0) complex [Pd2(μ2-PCHP,κP,κP)2] (PCHP-Pd2), which resisted further deprotonation of the imidazolium cation. In contrast, PCHP reacted with [AuCl(tht)] to give [Au2Cl2(μ2-PCHP,κP,κP)] (PCHP-Au2), in which one Au-Cl moiety is bound to each P donor. Further reaction of PCHP-Au2 with [Au{N(SiMe3)2}(PPh3)] afforded a mixture of the trinuclear [Au3(μ3-PC(NHC)P,κP,κC(NHC),κP)2](OTf)3 (Au3) and [AuCl(PPh3)], while reaction with [CuMes]5, where Mes = 2,4,6-trimethylphenyl, resulted in a novel, centrosymmetric, heterometallic complex [Au2Mes2(Cu4Cl4)(PCHP,κP,κP)2] (PCHP-AuCu) featuring a new PCHP-AuMes metalloligand bridging a Cu···Cu diagonal of a Cu4Cl4 cubane via the P and AuMes functionalities.

  • Molecular Determinants of Vectofusin-1 and Its Derivatives for the Enhancement of Lentivirally Mediated Gene Transfer into Hematopoietic Stem/Progenitor Cells

    Saliha Majdoul, Ababacar K. Seye, Antoine Kichler, Nathalie Holic, A. Galy, Burkhard Bechinger, David Fenard
    Journal of Biological Chemistry, 2016, 291 (5), pp.2161-9. ⟨10.1074/jbc.M115.675033⟩ | Publiée le 29 janvier 2016
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    Gene delivery into hCD34+ hematopoietic stem/progenitor cells (HSPCs) using human immunodeficiency virus, type 1-derived lentiviral vectors (LVs) has several promising therapeutic applications. Numerous clinical trials are currently underway. However, the efficiency, safety, and cost of LV gene therapy could be ameliorated by enhancing target cell transduction levels and reducing the amount of LV used on the cells. Several transduction enhancers already exist, such as fibronectin fragments or cationic compounds. Recently, we discovered Vectofusin-1, a new transduction enhancer, also called LAH4-A4, a short histidine-rich amphipathic peptide derived from the LAH4 family of DNA transfection agents. Vectofusin-1 enhances the infectivity of lentiviral and gamma-retroviral vectors pseudotyped with various envelope glycoproteins. In this study, we compared a family of Vectofusin-1 isomers and showed that Vectofusin-1 remains the lead peptide for HSPC transduction enhancement with LVs pseudotyped with vesicular stomatitis virus glycoproteins and also with modified gibbon ape leukemia virus glycoproteins. By comparing the capacity of numerous Vectofusin-1 variants to promote the modified gibbon ape leukemia virus glycoprotein-pseudotyped lentiviral vector infectivity of HSPCs, the lysine residues on the N-terminal extremity of Vectofusin-1, a hydrophilic angle of 140 degrees formed by the histidine residues in the Schiffer-Edmundson helical wheel representation, hydrophobic residues consisting of leucine were all found to be essential and helped to define a minimal active sequence. The data also show that the critical determinants necessary for lentiviral transduction enhancement are partially different from those necessary for efficient antibiotic or DNA transfection activity of LAH4 derivatives. In conclusion, these results help to decipher the action mechanism of Vectofusin-1 in the context of hCD34+ cell-based gene therapy.

  • A Bis(Diphosphanyl N-Heterocyclic Carbene) Gold Complex: A Synthon for Luminescent Rigid AuAg2 Arrays and Au5 and Cu6 Double Arrays

    Pengfei Ai, Matteo Mauro, Luisa de Cola, Andreas Danopoulos, Pierre Braunstein
    Angewandte Chemie International Edition, 2016, 55 (10), pp.3338-3341. ⟨10.1002/anie.201510150⟩ | Publiée le 28 janvier 2016
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    A mononuclear bis(NHC)/Au(I) (NHC=N-heterocyclic carbene) cationic complex with a rigid bis(phosphane)-functionalized NHC ligand (PC(NHC)P) was used to construct linear Au3 and Ag2 Au arrays, a Au5 cluster with two intersecting crosslike Au3 arrays, and an unprecedented Cu6 complex with two parallel Cu3 arrays. The impact of metallophilic interactions on photoluminescence was studied experimentally.

  • Photo-switchable tweezers illuminate pore-opening motions of an ATP-gated P2X ion channel

    Chloé Habermacher, Adeline Martz, Nicolas Calimet, Damien Lemoine, Laurie Peverini, Alexandre Specht, Marco Cecchini, Thomas Grutter
    eLife, 2016, 5, ⟨10.7554/eLife.11050⟩ | Publiée le 25 janvier 2016
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    P2X receptors function by opening a transmembrane pore in response to extracellular ATP. Recent crystal structures solved in apo and ATP-bound states revealed molecular motions of the extracellular domain following agonist binding. However, the mechanism of pore opening still remains controversial. Here we use photo-switchable cross-linkers as ‘molecular tweezers’ to monitor a series of inter-residue distances in the transmembrane domain of the P2X2 receptor during activation. These experimentally based structural constraints combined with computational studies provide high-resolution models of the channel in the open and closed states. We show that the extent of the outer pore expansion is significantly reduced compared to the ATP-bound structure. Our data further reveal that the inner and outer ends of adjacent pore-lining helices come closer during opening, likely through a hinge-bending motion. These results provide new insight into the gating mechanism of P2X receptors and establish a versatile strategy applicable to other membrane proteins.

  • Free superoxide is an intermediate in the production of H2O2 by copper(I)-Aβ peptide and O2

    Karine Reybier, Sara Ayala, Bruno Alies, Joao V. Rodrigues, Susana Bustos rodriguez, Giovanni La penna, Fabrice Collin, Claudio M. Gomes, Christelle Hureau, Peter Faller
    Angewandte Chemie International Edition, 2016, 55 (3), pp.1085-1089. ⟨10.1002/anie.201508597⟩ | Publiée le 18 janvier 2016
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    Oxidative stress is considered as an important factor and an early event in the etiology of Alzheimer's disease (AD). Cu bound to the peptide amyloid-β (Aβ) is found in AD brains, and Cu-Aβ could contribute to this oxidative stress, as it is able to produce in vitro H2O2 and HO. in the presence of oxygen and biological reducing agents such as ascorbate. The mechanism of Cu-Aβ-catalyzed H2O2 production is however not known, although it was proposed that H2O2 is directly formed from O2 via a 2-electron process. Here, we implement an electrochemical setup and use the specificity of superoxide dismutase-1 (SOD1) to show, for the first time, that H2O2 production by Cu-Aβ in the presence of ascorbate occurs mainly via a free O2.− intermediate. This finding radically changes the view on the catalytic mechanism of H2O2 production by Cu-Aβ, and opens the possibility that Cu-Aβ-catalyzed O2.− contributes to oxidative stress in AD, and hence may be of interest.

  • Homo‐ and Heterodinuclear Ir and Rh Imine‐functionalized Protic NHC Complexes: Synthetic, Structural Studies, and Tautomerization/Metallotropism Insights

    Fan He, Marcel Wesolek, Andreas Danopoulos, Pierre Braunstein
    Chemistry - A European Journal, 2016, 22 (8), pp.2658-2671. ⟨10.1002/chem.201504030⟩ | Publiée le 15 janvier 2016
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    Abstract The influence of the potentially chelating imino group of imine‐functionalized Ir and Rh imidazole complexes on the formation of functionalized protic N‐heterocyclic carbene (pNHC) complexes by tautomerization/metallotropism sequences was investigated. Chloride abstraction in [Ir(cod)Cl{C 3 H 3 N 2 (DippN=CMe)‐κN3}] ( 1 a ) (cod=1,5‐cyclooctadiene, Dipp=2,6‐diisopropylphenyl) with TlPF 6 gave [Ir(cod){C 3 H 3 N 2 (DippN=CMe)‐κ 2 (C2,N imine )}] + [PF 6 ] − ( 3 a + [PF 6 ] − ). Plausible mechanisms for the tautomerization of complex 1 a to 3 a + [PF 6 ] − involving C2−H bond activation either in 1 a or in [Ir(cod){C 3 H 3 N 2 (DippN=CMe)‐κN3} 2 ] + [PF 6 ] − ( 6 a + [PF 6 ] − ) were postulated. Addition of PR 3 to complex 3 a + [PF 6 ] − afforded the eighteen‐valence‐electron complexes [Ir(cod)(PR 3 ){C 3 H 3 N 2 (DippN=CMe)‐κ 2 (C2,N imine )}] + [PF 6 ] − ( 7 a + [PF 6 ] − (R=Ph) and 7 b + [PF 6 ] − (R=Me)). In contrast to Ir, chloride abstraction from [Rh(cod)Cl{C 3 H 3 N 2 (DippN=CMe)‐κN3}] ( 1 b ) at room temperature afforded [Rh(cod){C 3 H 3 N 2 (DippN=CMe)‐κN3} 2 ] + [PF 6 ] − ( 6 b + [PF 6 ] − ) and [Rh(cod){C 3 H 3 N 2 (DippN=CMe)‐κ 2 (C2,N imine )}] + [PF 6 ] − ( 3 b + [PF 6 ] − ) (minor); the reaction yielded exclusively the latter product in toluene at 110 °C. Double metallation of the azole ring (at both the C2 and the N3 atom) was also achieved: [Ir 2 (cod) 2 Cl{μ‐C 3 H 2 N 2 (DippN=CMe)‐κ 2 (C2,N imine ),κN3}] ( 10 ) and the heterodinuclear complex [IrRh(cod) 2 Cl{μ‐C 3 H 2 N 2 (DippN=CMe)‐κ 2 (C2,N imine ),κN3}] ( 12 ) were fully characterized. The structures of complexes 1 b , 3 b + [PF 6 ] − , 6 a + [PF 6 ] − , 7 a + [PF 6 ] − , [Ir(cod){C 3 HN 2 (DippN=CMe)(DippN=CH)(Me)‐κ 2 (N3,N imine )}] + [PF 6 ] − ( 9 + [PF 6 ] − ), 10⋅ Et 2 O ⋅ toluene, [Ir 2 (CO) 4 Cl{μ‐C 3 H 2 N 2 (DippN=CMe)‐κ 2 (C2,N imine ),κN3}] ( 11 ), and 12⋅ 2 THF were determined by X‐ray diffraction.

  • On-Demand Cyclophanes: Substituent-Directed Self-Assembling, Folding, and Binding

    Pierre-Thomas Skowron, Bernard Dumartin, Bernard Jeamet, Bernard Perret, Christophe Gourlaouen, Anne Baudouin, Bernard Fenet, Jean-Valère Naubron, Frédéric Fotiadu, Laurent Vial, Julien Leclaire
    Journal of Organic Chemistry, 2016, 81 (2), pp.654 - 661. ⟨10.1021/acs.joc.5b02605⟩ | Publiée le 5 janvier 2016
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    A family of p-cyclophanes based on bis- or tetrafunctionalized 1,4-bisthiophenol units linked by disulfide bridges was obtained by self-assembly on a gram scale and without any chromatographic purification. The nature of the functionalities borne by these so-called dyn[4]arenes plays a crucial role on their structural features as well as their molecular recognition abilities. Tuning these functions on demand yields tailored receptors for cations, anions, or zwitterions in organic or aqueous media.

  • Cobalt PNC NHC‘pincers’: ligand dearomatisation, formation of dinuclear and N2complexes and promotion of C–H activation

    Thomas Simler, Pierre Braunstein, Andreas Danopoulos
    Chemical Communications, 2016, 52 (13), pp.2717-2720. ⟨10.1039/C5CC10121B⟩ | Publiée le 5 janvier 2016
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    Studies of ligand dearomatisation in cobalt phosphino-picoline N-heterocyclic carbene (PNCNHC)-type pincers have revealed the formation of dinuclear cobalt complexes by either side-arm metalation or C–H activation at the NHC backbone; in the latter case, the product complex, featuring an ‘anionic dicarbene’, originated from a dearomatised CoI–N2 complex.

  • The Influence of Imidazolylidene Ligands with Bulky Resorcinarenyl Substituents on Catalysts for ­Suzuki–Miyaura Coupling

    Murat Kaloğlu, David Semeril, Eric Brenner, Dominique Matt, İsmail Özdemir, Loic Toupet
    European Journal of Inorganic Chemistry, 2016, 2016 (7), pp.1115-1120. ⟨10.1002/ejic.201501238⟩ | Publiée le 1 janvier 2016
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    PEPPSI-type imidazolylidene palladium complexes having their carbenic ring N-substituted with an aryl ring and a cavity-shaped unit [25,26,27,28-tetrapropyloxycalix[4]aren-5-yl or 6(10),12(16),18(22)-tetramethylenedioxy-2,8,14,20-tetrapentylresorcin[4]aren-5-yl (TPR)] have been prepared and assessed in Suzuki–Miyaura cross-couplings. Remarkable efficiency in the coupling of aryl chlorides with sterically hindered arylboronic acids was observed for the carbene ligand having its N atoms (N1, N2) substituted by a mesityl and a TPR group, respectively. This good performance possibly arises from strong steric interactions between the pentyl-substituted cavitand unit and the catalytic centre, which favours reductive elimination. Two of the imidazolium salts used for complex synthesis were characterised by X-ray diffraction analysis

  • Predicting molecular self-assembly at surfaces: a statistical thermodynamics and modeling approach

    Simone Conti, Marco Cecchini
    Physical Chemistry Chemical Physics, 2016, 18 (46), pp.31480-31493. ⟨10.1039/C6CP05249E⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Molecular self-assembly at surfaces and interfaces is a prominent example of self-organization of matter with outstanding technological applications. The ability to predict the equilibrium structure of a self- assembled monolayer (SAM) is of fundamental importance and would boost the development of bottom-up strategies in a number of fields. Here, we present a self-consistent theory for a first-principles interpretation of 2D self-assembly based on modelling and statistical thermodynamics. Our development extends the treatment from finite-size to infinite supramolecular objects and delineates a general framework in which previous approaches can be recovered as particular cases. By proving the existence of a chemical potential per unit cell, we derive an expression for the surface free energy of the SAM (γ), which provides access to the thermodynamic stability of the monolayer in the limit of the ideal gas approximation and the model of energetics in use. Further manipulations of this result provide another expression of γ, which makes the concentration dependence as well as the temperature dependence of 2D self-assembly explicit. In the limit of the approximations above, this second result was used to analyse competitive equilibria at surfaces and rationalize the concentration- and temperature-dependent polymorphism in 2D. Finally, the theory predicts that there exists a critical aggregation concentration (Ccac) of monomers above which 2D self-assembly can be viewed as a “precipitation” in a solubility equilibrium. Numerical analysis of thirteen model SAMs on graphene shows that the value of Ccac sets an absolute scale of 2D self-assembly propensity, which is useful to compare chemically distinct and apparently unrelated self-assembly reactions.

  • Arylcalixarenyl Phosphines in Palladium-Catalyzed Suzuki-Miyaura Cross-Coupling Reactions.

    Fethi Elaieb, Ahmed Hedhli, David Sémeril, Dominique Matt
    European Journal of Organic Chemistry, 2016, 2016 (10), pp.1867-1873. ⟨10.1002/ejoc.201600055⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Two electron-rich arylcalixarenylphosphines have been synthesized in three steps from the appropriate 5-bromocalix[4]arene precursor. The combination of 5-(2-diisopropylphosphinophenyl)-25,26,27,28-tetrapropyloxycalix[4]arene (I) and 5-(2-dicyclohexylphosphinophenyl)-25,26,27,28-tetrapropyloxycalix[4]arene (II), resp., with [Pd2(dba)3] (dba = dibenzylideneacetone) generated effective catalysts for the cross-coupling reactions of hindered aryl chlorides and arylboronic acids. Dicyclohexylphosphino-substituted ligand II had a higher activity that that of I, and the structures of ligand I and AuCl·I were detd. by single-crystal X-ray diffraction studies. The solid-state structure of AuCl·I revealed that the gold atom lies above the outer face of the calixarene unit, with distances of 3.08 and 3.28 Å between the gold atom and the two closest arom. carbon atoms of the calixarene moiety. [on SciFinder(R)]

  • Functional short-bite ligands: Synthesis, coordination chemistry, and applications of N-functionalized bis(diaryl/dialkylphosphino)amine-type ligands

    Christophe Fliedel, Alessio Ghisolfi, P. Braunstein
    Chemical Reviews, 2016, 116 (16), pp.9237-9304. ⟨10.1021/acs.chemrev.6b00153⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    The aim of this review is to highlight how the diversity generated by N-substitution in the well-known short-bite ligand bis(diphenylphosphino)amine (DPPA) allows a fine-tuning of the ligand properties and offers a considerable scope for tailoring the properties and applications of their corresponding metal complexes. The various N-substituents include nitrogen-, oxygen-, phosphorus-, sulfur-, halogen-, and silicon-based functionalities and directly N-bound metals. Multiple DPPA-type ligands linked through an organic spacer and N-functionalized DRPA-type ligands, in which the PPh2 substituents are replaced by PR2 (R = alkyl, benzyl) groups, are also discussed. Owing to the considerable diversity of N-functionalized DPPA-type ligands available, the applications of their mono and polynuclear metal complexes are very diverse and range from homogeneous catalysis with well-defined or in situ generated (pre) catalysts to heterogeneous catalysis and materials science. In particular, sustained interest for DPPA-type ligands has been motivated, at least in part, by their ability to promote selective ethylene tri- or tetramerization in combination with chromium. Ligands and metal complexes where the N-substituent is a pure hydrocarbon group (as opposed to N-functionalization) are outside the scope of this review. However, when possible, a comparison between the catalytic performances of N-functionalized systems with those of their N-substituted analogs will be provided.

  • Bonding, luminescence, metallophilicity in linear Au3 and Au2Ag chains stabilized by rigid diphosphanyl NHC ligands

    Pengfei Ai, Matteo Mauro, Christophe Gourlaouen, Serena Carrara, Luisa de Cola, Yeny Tobon, Umberto Giovanella, Chiara Botta, Andreas Danopoulos, Pierre Braunstein
    Inorganic Chemistry, 2016, 55 (17), pp.8527 - 8542. ⟨10.1021/acs.inorgchem.6b01095⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    The heterofunctional and rigid ligand N,N′-diphosphanyl-imidazol-2-ylidene (PCNHCP; P = P(t-Bu)2), through its phosphorus and two N-heterocyclic carbene (NHC) donors, stabilizes trinuclear chain complexes, with either Au3 or AgAu2 cores, and dinuclear Au2 complexes. The two oppositely situated PCNHCP (L) ligands that "sandwich" the metal chain can support linear and rigid structures, as found in the known tricationic Au(I) complex [Au3(μ3-PCNHCP,κP,κCNHC,κP)2](OTf)3 (OTf = CF3SO3; [Au3L2](OTf)3; Chem. Commun. 2014, 50, 103-105) now also obtained by transmetalation from [Ag3(μ3-PCNHCP,κP,κCNHC,κP)2](OTf)3 ([Ag3L2](OTf)3), or in the mixed-metal tricationic [Au2Ag(μ3-PCNHCP,κP,κCNHC,κP)2](OTf)3 ([Au2AgL2](OTf)3). The latter was obtained stepwise by the addition of AgOTf to the digold(I) complex [Au2(μ2-PCNHCP,κP,κCNHC)2](OTf)2 ([Au2L2](OTf)2). The latter contains two dangling P donors and displays fluxional behavior in solution, and the Au···Au separation of 2.8320(6) Å in the solid state is consistent with metallophilic interactions. In the solvento complex [Au3Cl2(tht)(μ3-PCNHCP,κP,κCNHC,κP)](OTf)·MeCN ([Au3Cl2(tht)L](OTf)·MeCN), which contains only one L and one tht ligand (tht = tetrahydrothiophene), the metal chain is bent (148.94(2)°), and the longer Au···Au separation (2.9710(4) Å) is in line with relaxation of the rigidity due to a more "open" structure. Similar features were observed in [Au3Cl2(SMe2)L](OTf)·2MeCN. A detailed study of the emission properties of [Au3L2](OTf)3, [Au3Cl2(tht)L](OTf)·MeCN, [Au2L2](OTf)2, and [Au2AgL2](OTf)3 was performed by means of steady state and time-resolved photophysical techniques. The complex [Au3L2](OTf)3 displays a bright (photoluminescence quantum yield = 80%) and narrow emission band centered at 446 nm with a relatively small Stokes' shift and long-lived excited-state lifetime on the microsecond timescale, both in solution and in the solid state. In line with the very narrow emission profile centered in the violet-blue region, fabrication of organic light-emitting devices (OLEDs) comprising the [Au3L2](OTf)3 complex demonstrated its usefulness as a deep-blue emitter in solution-processed OLEDs. Electrochemical and Raman spectroscopic studies were also performed on [Au3L2](OTf)3. Experimental results were rationalized by means of Wave-Function Theory (WFT) and Density Functional Theory (DFT). MP2 calculations gave a satisfactory description of the structures of the cationic complexes [Au3L2]3+ and [Au2L2]2+ and pointed to Au···Au interactions having an electrostatic component owing to the dissimilar charge distribution in the chain caused by the heterofunctional ligand. The nature of the emitting states and their geometric distortions relative to the ground states in [Au3L2]3+ and [Au2L2]2+ was studied by DFT, revealing contraction of the Au···Au distances and coordination geometry changes by association of the dangling P donor, respectively.

  • Heteroanionic Materials Based on Copper Clusters, Bisphosphonates, and Polyoxometalates: Magnetic Properties and Comparative Electrocatalytic NO x Reduction Studies

    Olivier Oms, Shu Yang, William Salomon, Jérôme Marrot, Anne Dolbecq, Eric Rivière, Antoine Bonnefont, Laurent Ruhlmann, Pierre Mialane
    Inorganic Chemistry, 2016, 55 (4), pp.1551-1561. ⟨10.1021/acs.inorgchem.5b02456⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Three compounds associating for the first time polyoxotungstates, bisphosphonates and copper ions have been structurally characterized. They consist in heteropolyanionic monodimensional materials where [Cu6(Ale)4(H2O)4]4- (Ale = alendronate = [O3PC(O)(C3H6NH3)PO3]4-) complexes alternate with polyoxometalate (POM) units. In Na12[{SiW9O34Cu3(Ale)(H2O)}{Cu6(Ale)4(H2O)4}]∙50H2O (SiW9CuAle), the polyoxometalate core consists in a {SiW9Cu3} monomer capped by a pentacoordinated Ale ligand, while sandwich-type Keggin {(SbW9O33)2Cu3(H2O)2.5Cl0.5} and Dawson {(P2W15O56)2Cu4(H2O)2} complexes are found in Na8Li29[{(SbW9O33)2Cu3(H2O)2.5Cl0.5}2{Cu6(Ale)4(H2O)4}3]∙163H2O (SbW9CuAle) and Na20[{(P2W15O56)2Cu4(H2O)2}{Cu6(Ale)4(H2O)4}]∙50H2O (P2W15CuAle), respectively. A comparative magnetic study of the SiW9CuAle and SbW9CuAle compounds has allowed to fully quantify the CuII superexchange interactions either for the POM and non-POM subunits, evidencing that while the paramagnetic centers are antiferromagnetically coupled in the polyoxometalate units, both antiferromagnetic and ferromagnetic interactions coexist in the {Cu6(Ale)4(H2O)4} cluster. All the studied compounds present a good efficiency upon the reduction of HNO2 or NO2-, the POM acting as a catalyst. However, it has been found that SbW9CuAle is inactive toward the reduction of nitrates, highlighting that both the {(SbW9O33)2Cu3} unit and the {Cu6(Ale)4(H2O)4} cluster do not act as electrocatalysts for this reaction. In contrast, SiW9CuAle and P2W15CuAle have shown a significant activity upon the reduction of NO3- and thus both at pH 1 and pH 5, evidencing that the chemical nature of the polyoxometalate is a crucial parameter even if it acts as pre-catalyst. Moreover, comparison of the activities of P2W15CuAle and [(P2W15O56)2Cu4(H2O)2]16- evidenced that if the {Cu6(Ale)4(H2O)4} cluster do not act as electrocatalysts, it act as a co-factor, significantly enhancing the catalytic efficiency of the active POM.

  • Crystal structure of trans-dichlorido[1,3-bis(9-methyl-9H-fluoren-9-yl) benzimidazol-2-ylidene](pyridine)palladium(II)-a compound with anagostic CH-Pd interactions, C40H31Cl2N3Pd

    M. Teci, E. Brenner, D. Matt, Loic Toupet
    Zeitschrift für Kristallographie - New Crystal Structures, 2016, 231 (3), pp.733--735. ⟨10.1515/ncrs-2015-0251⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    C40H31Cl2N3Pd, orthorhombic, Pnma (no. 62), a = 16.7821(7), b = 14.1436(8), c = 11.1431(5) Å, V = 3205.9(2) Å3, Z = 4, Rgt(F) = 0.0394, wRref(F2) = 0.0817, T = 150 K. © 2016 Matthieu Teci et al., published by De Gruyter.

  • Magnesium and aluminum complexes bearing bis(5,6,7-trihydro quinolyl)-fused benzodiazepines for ε-caprolactone polymerization

    Natesan Mannangatti Rajendran, Yanxia Xi, Wenjuan Zhang, Pierre Braunstein, Tongling Liang, Wen-Hua Sun
    Inorganic Chemistry Frontiers, 2016, 3 (10), pp.1317-1325. ⟨10.1039/C6QI00177G⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    New bis(5,6,7-trihydroquinolyl)-fused benzodiazepine ligands were synthesized and used to form dinuclear magnesium and aluminum complexes which showed efficient catalytic activity toward the ROP of ε-CL.

  • Direct synthesis of doubly deprotonated, dearomatised lutidine PNP Cr and Zr pincer complexes based on isolated K and Li ligand transfer reagents

    Thomas Simler, Gilles Frison, Pierre Braunstein, Andreas A. Danopoulos
    Dalton Transactions, 2016, 45 (7), pp.2800-2804. ⟨10.1039/c6dt00144k⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Double deprotonation of 2,6-bis-(di-tert-butylphosphinomethyl)-pyridine (tBuPNtBuP), with KCH2C6H5 afforded K2(tBuP*NatBuP*), Na = anionic amido N, tBuP* = di-tert-butyl vinylic P donor. The analogous [Li2(tBuP*NatBuP*)]2 (1) was reacted with [CrCl2(THF)2] and [ZrCl4(THT)2] to give the helical [Cr{Cr(tBuP*NatBuP*)Cl}2] (2) and [Zr(tBuP*NatBuP*)Cl2] (3), respectively. DFT calculations support dearomatisation of P*NaP* and its high donor ability.

  • Monitoring the pH Triggered Collapse of Liposomes in the Far IR Hydrogen Bonding Continuum

    Batoul Srour, Birgit Erhard, Regine Süss, Petra Hellwig
    Journal of Physical Chemistry B, 2016, 120 (17), pp.4047-4052. ⟨10.1021/acs.jpcb.6b03759⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Far infrared spectra of complex molecular structures like lipid membranes or proteins show large and broad continuum modes that include contributions of the internal hydrogen bonding of the assembled structures. Here we corroborate the pH triggered structural rearrangement in pH-sensitive liposomes with a clear shift of the far-infrared mode from 170 to 159 cm(-1). This spectral change was accompanied by the broadening of the hydrogen bonding signature by about 25 cm(-1) and correlates with the well-known hydrogen bonding dependent shifts of the ν(PO2(-))(as) vibration of the lipid headgroup in the mid infrared and with further shifts of functional group vibrations. Far infrared spectroscopy is thus a useful tool for the investigation of conformational changes in large molecular structures.

  • Pertinent parameters in photo-generation of electrons: Comparative study of anatase-based nano-TiO2 suspensions

    David Martel, Abdelouadoud Guerra, Philippe Turek, Jean Weiss, B Vileno
    Journal of Colloid and Interface Science, 2016, 467, pp.300 - 306. ⟨10.1016/j.jcis.2016.01.018⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    In the field of solar fuel cells, the development of efficient photo-converting semiconductors remains a major challenge. A rational analysis of experimental photocatalytic results obtained with material in colloïdal suspensions is needed to access fundamental knowledge required to improve the design and properties of new materials. In this study, a simple system electron donor/nano-TiO 2 is considered and examined via spin scavenging electron paramagnetic resonance as well as a panel of analytical techniques (composition, optical spectroscopy and dynamic light scattering) for selected type of nano-TiO 2. Independent variables (pH, electron donor concentration and TiO 2 amount) have been varied and interdependent variables (aggregate size, aggregate surface vs. volume and acid/base groups distribution) are discussed. This work shows that reliable understanding involves thoughtful combination of interdependent parameters, whereas the specific surface area seems not a pertinent parameter. The conclusion emphasizes the difficulty to identify the key features of the mechanisms governing photocatalytic properties in nano-TiO 2 .

  • Gold(I)-Catalyzed Cyclization/Nucleophilic Substitution of 1-( N -Sulfonylazetidin-2-yl) Ynones into N -Sulfonylpyrrolin-4-ones

    Solène Miaskiewicz, Jean-Marc Weibel, Patrick Pale, Aurélien Blanc
    Organic Letters, 2016, 18 (4), pp.844-847. ⟨10.1021/acs.orglett.6b00135⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Polysubstituted pyrrolin-4-ones have been efficiently synthesized from readily available 1-(N-sulfonylazetidin-2-yl) ynones via gold(I)-catalyzed cyclization/nucleophilic substitution in the presence of various nucleophiles, such as water, alcohols, or indoles. Additionally, 3-iodopyrrolin-4-one derivatives have also been obtained under the same reaction conditions upon addition of 1.2 equiv of N-iodosuccinimide.

  • A calixarene-decorated phosphole oxide.

    Fethi Elaieb, Ahmed Hedhli, David Sémeril, Dominique Matt, Jack Harrowfield
    European Journal of Organic Chemistry, 2016, 2016 (18), pp.3103-3108. ⟨10.1002/ejoc.201600381⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    A conical calix[4]arene receptor I (9, R = n-Pr) equipped with a benzo[b]phosphole oxide grafted to its upper rim was obtained in six steps by starting from 5-bromo-25,26,27,28-tetrapropyloxycalix[4]arene. The route involved the synthesis of the calixarene intermediate II (5, R = n-Pr, M = electron pair) that bears a 2-(diphenylphosphinyl)phenylethynyl substituent connected to the calixarene wider rim. Under PdII/CuI co-catalysis, mixed phosphane-alkyne 5, when heated at 120°, underwent P-Ph bond cleavage followed by attack of the phosphorus atom onto the carbon-carbon triple bond. The resulting calixarene-phosphole was then oxidized to form the corresponding phosphole oxide 9. Compd. 9 luminesced strongly under UV irradn. The solid-state structure of a deriv. of phosphane-alkyne 5, AuCl complex (8, shown as II, M = AuCl), was established by a single-crystal x-ray diffraction study. Borane complex (6, shown as II, R = n-Pr, M = BH3) and oxide of 5 (7) were also prepd. [on SciFinder(R)]

  • Self-organized arrays of dislocations in thin smectic liquid crystal films

    Delphine Coursault, Bruno Zappone, Alessandro Coati, Athmane Boulaoued, Laurent Pelliser, Denis Limagne, Nathalie Boudet, Bicher Haj Ibrahim, Antonello de Martino, Michel Alba, Michel Goldmann, Yves Garreau, Bruno Gallas, Emmanuelle Lacaze
    Soft Matter, 2016, 12 (3), pp.678-688. ⟨10.1039/C5SM02241J⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Combining optical microscopy, synchrotron X-ray diffraction and ellipsometry, we studied the internal structure of linear defect domains (oily streaks) in films of smectic liquid crystal 8CB with thickness 100-300 nm confined between air and a rubbed PVA polymer substrate which impose hybrid anchoring conditions (normal and unidirectional planar, respectively). We show how the presence or absence of dislocations control the structure of highly deformed thin smectic films. Each domain contains smectic layers curved in the shape of flattened hemicylinders to satisfy both anchoring conditions, together with grain boundaries whose size and shape are controlled by the presence of dislocation lines. A flat grain boundary normal to the interface connects neighboring hemicylinders, while a rotating grain boundary (RGB) is located near the axis of curvature of the cylinders. The RGB shape appears such that dislocation lines are concentrated at its summit close to the air interface. The smectic layers reach the polymer substrate via a transition region where the smectic layer orientation satisfies the planar anchoring condition over the entire polymer substrate and whose thickness does not depend on the one of the film. The strength of the planar anchoring appears to be high, larger than 10 −2 J/m 2 , compensating for the high energy cost of creating an additional 2D defect between an horizontal smectic layer and perpendicular ones. This 2D defect may be melted, in order to avoid the creation of a transition region structure composed of a large number of dislocations. As a result, linear defect domains can be considered as arrays of oriented defects, straight dislocations of various Burger vectors, whose location is now known and 2D nematic defects. The possibility of easy variation between the present structure with a moderate amount of dislocations and a structure with a large number of dislocations is also demonstrated.

  • Combined local anodization of titanium and scanning photoelectrochemical mapping of TiO2 spot arrays

    Vasilica Badets, Gabriel Loget, P. Garrigue, N. Sojic, D. Zigah
    Electrochimica Acta, 2016, 222, pp.84-91. ⟨10.1016/j.electacta.2016.10.151⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Localized growth of TiO2 and rapid screening of TiO2 photoelectrochemical properties by scanning electrochemical microscopy (SECM) are described. We report the fabrication and operation of an electrochemical tool comprising a microcapillary and an ultramicroelectrode (Cap-UME) that is used for the local formation of TiO2 microspots. The tip allows the generation of arrays of TiO2 of different physicochemical and catalytic characteristics. Moreover, these results prove that local anodization is an efficient method to obtain TiO2 films with micrometre resolution. The use of a combined optical fiber-ultramicroelectrode (OF-UME) in a SECM configuration may operate in two different detection modes. In the first mode, the array is biased and the OF-UME is used as a scanning light source allowing a photocurrent mapping of the surface. In the second mode, the dual OF-UME system serves simultaneously as a light source and an O2 electrochemical sensor which resolved spatially the photoelectrochemically generated O2 species. A direct correlation between the potentials used to produce TiO2, the photocatalytic properties of the TiO2 spots and the amount of oxygen produced was found, demonstrating the strong potential of these tools for the rapid and convenient mapping of TiO2 array properties on a single surface.

  • Rationalizing the Influence of the Mn(IV)/Mn(III) Red-Ox Transition on the Electrocatalytic Activity of Manganese Oxides in the Oxygen Reduction Reaction

    Anna Ryabova, Filipp S. Napolskiy, Tiphaine Poux, Sergey Ya. Istomin, Antoine Bonnefont, Denis M. Antipin, Alexander Ye. Baranchikov, Eduard E. Levin, Artem M. Abakumov, Gwénaëlle Kerangueven, Evgeny V. Antipov, Galina A. Tsirlina, Elena Savinova
    Electrochimica Acta, 2016, 187, pp.161-172. ⟨10.1016/j.electacta.2015.11.012⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Knowledge on the mechanisms of oxygen reduction reaction (ORR) and descriptors linking the catalytic activity to the structural and electronic properties of transition metal oxides enable rational design of more efficient catalysts. In this work ORR electrocatalysis was studied on a set of single and complex Mn(III) oxides with a rotating disc electrode method and cyclic voltammetry. We discovered an exponential increase of the specific electrocatalytic activity with the potential of the surface Mn(IV)/Mn(III) red-ox couple, suggesting the latter as a new descriptor for the ORR electrocatalysis. The observed dependence is rationalized using a simple mean-field kinetic model considering availability of the Mn(III) centers and adsorbate-adsorbate interactions. We demonstrate an unprecedented activity of Mn2O3, ca. 40 times exceeding that of MnOOH and correlate the catalytic activity of Mn oxides to their crystal structure.

  • Zwitterionic Cobalt Complexes with Bis(diphenylphosphino)(N-thioether)amine Assembling Ligands: Structural, EPR, Magnetic, and Computational Studies.

    Christophe Fliedel, Vitor Rosa, Bertrand Vileno, Nathalie Parizel, Sylvie Choua, Christophe Gourlaouen, Patrick Rosa, Philippe Turek, Pierre Braunstein
    Inorganic Chemistry, 2016, 55 (9), pp.4183-4198. ⟨10.1021/acs.inorgchem.5b02889⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    The coordination of two heterofunctional P,P,S ligands of the N-functionalized DPPA-type bearing an alkylthioether or arylthioether N-substituent, (Ph2P)2N(CH2)3SMe (1) and (Ph2P)2N(p-C6H4)SMe (2), respectively, toward cobalt dichloride was investigated to examine the influence of the linker between the PNP nitrogen and the S atoms. The complexes [CoCl2(1)]2 (3) and [CoCl2(2)]2 (4) have been isolated, and 3 was shown by X-ray diffraction to be a unique dinuclear, zwitterion containing one CoCl moiety bis-chelated by two ligands 1 and one CoCl3 fragment coordinated by the S atom of a thioether function. The FT-IR, UV-vis, and EPR spectroscopic features of 3 were analyzed as the superposition of those of constitutive fragments identified by a retrosynthetic-type analysis. A similar approach provided insight into the nature of 4 for which no X-ray diffraction data could be obtained. A comparison between the spectroscopic features of 4 and of its constitutive fragments, [CoCl(2)2]PF6 (7) and [H2']2[CoCl4] (8) (2' = NH2(p-C6H4)SMe), and between those of 4 and 3 suggested that 4 could either have a zwitterionic structure, similar to that of 3, or contain a tetrahedral dicationic bis-chelated Co center associated with a CoCl4 dianion. Magnetic and EPR studies and theoretical calculations were performed. Doublet spin states were found for the pentacoordinated complexes [CoCl(1)2]PF6 (5) and 7 and anisotropic quadruplet spin states for the tetrahedral complexes [CoCl3(H1')] (6) (1' = NH2(CH2)3SMe) and 8. A very similar behavior was observed for 3 and 4, consisting in the juxtaposition of noninteracting doublet and quadruplet spin states. Antiferromagnetic interactions explain the formation of dimers for 6 and of layers for 8. The EPR signatures of 3 and 4 correspond to the superposition of low-spin nuclei in 5 and 7 and high-spin nuclei in 6 and 8, respectively. From DFT calculations, the solid-state structure of 4 appears best described as zwitterionic, with a low-spin state for the Co1 atom.

  • A Theranostic Agent Combining a Two-Photon-Absorbing Photosensitizer for Photodynamic Therapy and a Gadolinium(III) Complex for MRI Detection

    Julie Schmitt, Valérie Heitz, Angélique Sour, Frédéric Bolze, Pascal Kessler, Lucia Flamigni, Barbara Ventura, Célia S. Bonnet, Éva Tóth
    Chemistry - A European Journal, 2016, 22 (8), pp.2775-2786. ⟨10.1002/chem.201503433⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    The convergent synthesis and characterization of a potential theranostic agent, [DPP-ZnP-GdDOTA]-, which combines a diketopyrrolopyrrole-porphyrin component DPPZnP as a two-photon photosensitizer for photodynamic therapy (PDT) with a gadolinium(III) DOTA complex as a magnetic resonance imaging probe, is presented. [DPP-ZnP-GdDOTA]- has a remarkably high longitudinal water proton relaxivity(19.94 mm-1 s-1 at 20 MHz and 258C) for a monohydrated molecular system of this size. The Nuclear Magnetic Relaxation Dispersion (NMRD) profile is characteristic of slow rotation, related to the extended and rigid aromatic units integrated in the molecule and to self-aggregation occurring in aqueous solution. The two-photon properties were examinedand large two-photon absorption cross-sections around 1000 GM were determined between 910 and 940 nm in DCM with 1% pyridine and in DMSO. Furthermore, the newconjugate was able to generate singlet oxygen, with quantumyield of 0.42 and 0.68 in DCM with 1% pyridine and DMSO, respectively. Cellular studies were also performed. The [DPP-ZnP-GdDOTA]- conjugate demonstrated low dark toxicity and was able to induce high one-photon and moderate two-photon phototoxicity on cancer cells.

  • Room-Temperature Characterization of a Mixed-Valent µ-Hydroxodicopper(II,III) Complex

    James A Isaac, Franc A Gennarini, Isidoro López, Aurore Thibon-Pourret, Rolf David, Gisèle Gellon, Beátrice Gennaro, Christian Philouze, Franc Meyer, Serhiy Demeshko, Yves A Le Mest, Marius Réglier, Hélène Jamet, Nicolas A Le Poul, Catherine Belle
    Inorganic Chemistry, 2016, 55 (17), pp.8263-8266. ⟨10.1021/acs.inorgchem.6b01504⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Bis(μ-hydroxo)dicopper(II,II) bearing a naphthyridine-based ligand has been synthesized and characterized in the solid state and solution. Cyclic voltammetry at room temperature displays a reversible redox system that corresponds to the monoelectronic oxidation of the complex. Spectroscopic and time-resolved spectroelectrochemical data coupled to theoretical results support the formation of a charge-localized mixed-valent Cu II,III 2 species.

  • Crystal structure of 5,17-bis-cyano-25,26,27,28-tetrapropyloxy-calix[4]arene, C42H46N2O4.

    Fethi Elaieb, David Sémeril, Dominique Matt, Ahmed Hedhli
    Zeitschrift für Kristallographie - New Crystal Structures, 2016, 231 (3), pp.943-945. ⟨10.1515/ncrs-2016-0015⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    C42H46N2O4, orthorhombic, Pcca (No. 54), a = 14.9100(5), b = 17.2508(6), c = 16.0857(6) Å, V = 4137.4(3) Å3, Z = 4, Rgt(F) = 0.0710, wRref(F2) = 0.2308, T = 173 K. [on SciFinder(R)]

  • Infrared spectroscopic studies on reaction induced conformational changes in the NADH ubiquinone oxidoreductase (complex I)

    Petra Hellwig, Sébastien Kriegel, Thorsten Friedrich
    BBA - Biochimica et Biophysica Acta, 2016, 1857 (7), pp.922-927. ⟨10.1016/j.bbabio.2015.12.005⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Redox-dependent conformational changes are currently discussed to be a crucial part of the reaction mechanism of the respiratory complex I. Specialized difference Fourier transform infrared techniques allow the detection of side-chain movements and minute secondary structure changes. For complex I, (1)H/(2)H exchange kinetics of the amide modes revealed a better accessibility of the backbone in the presence of NADH and quinone. Interestingly, the presence of phospholipids, that is crucial for the catalytic activity of the isolated enzyme complex, changes the overall conformation. When comparing complex I samples from different species, very similar electrochemically induced FTIR difference spectra and very similar rearrangements are reported. Finally, the information obtained with variants and from Zn(2+) inhibited samples for the conformational reorganization of complex I upon electron transfer are discussed in this review. This article is part of a Special Issue entitled Respiratory complex I, edited by Volker Zickermann and Ulrich Brandt.

  • Investigations of the synergistic enhancement of antimicrobial activity in mixtures of magainin 2 and PGLa

    E Glattard, Evgeny Salnikov, Christopher Aisenbrey, Burkhard Bechinger
    Biophysical Chemistry, 2016, 210, pp.35-44. ⟨10.1016/j.bpc.2015.06.002⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Magainins are antimicrobial peptides isolated from the African clawed frog Xenopus laevis. They interact with bacterial membranes where they cause channel formation and membrane disruption. When added as a cocktail magainin 2 and PGLa are considerably more efficient when compared to the corresponding amounts of individual components. In order to investigate this synergistic interaction of PGLa and magainin a number of magainin variants have been prepared and investigated in biological and biophysical assays. In particular we report on the antimicrobial activities and solid-state NMR investigations of magainins that have been extended by a carboxyterminal GGC tripeptide to form covalently linked dimers. Notably, when the formation of the covalent linkage is prevented by exchanging the cystein by serine or alanine no loss in efficiency was observed indicating that the covalent interaction is not necessary for synergistic interaction. In a next step peptides labelled with (15)N and (2)H were reconstituted into oriented membranes and their topology studied by solid-state NMR spectroscopy. The tendency of some of these peptides to adopt membrane-spanning alignments does not correlate with their synergistic activities in antimicrobial assays. In contrast, the stable alignment of PGLa parallel to the surface of membranes made of Escherichia coli lipid extracts is strongly suggestive that the peptides develop synergistic activities when in an in-planar configuration. Notably, the phospholipid head groups of these samples show a high degree of disturbance suggesting that the synergistic interactions between the magainin peptides could be mediated through the lipid phase.

  • H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa.

    Nicola J Mulder, Ezekiel Adebiyi, Raouf Alami, Alia Benkahla, James Brandful, Seydou Doumbia, Dean Everett, Faisal M Fadlelmola, Fatima Gaboun, Simani Gaseitsiwe, Hassan Ghazal, Scott Hazelhurst, Winston Hide, Azeddine Ibrahimi, Yasmina Jaufeerally Fakim, C Victor Jongeneel, Fourie Joubert, Samar Kassim, Jonathan Kayondo, Judit Kumuthini, Sylvester Lyantagaye, Julie Makani, Ahmed Mansour Alzohairy, Daniel Masiga, Ahmed Moussa, Oyekanmi Nash, Odile Ouwe Missi Oukem-Boyer, Ellis Owusu-Dabo, Sumir Panji, Hugh Patterton, Fouzia Radouani, Khalid Sadki, Fouad Seghrouchni, Özlem Tastan Bishop, Nicki Tiffin, Nzovu Ulenga
    Genome Research, 2016, 26 (2), pp.271-7. ⟨10.1101/gr.196295.115⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    The application of genomics technologies to medicine and biomedical research is increasing in popularity, made possible by new high-throughput genotyping and sequencing technologies and improved data analysis capabilities. Some of the greatest genetic diversity among humans, animals, plants, and microbiota occurs in Africa, yet genomic research outputs from the continent are limited. The Human Heredity and Health in Africa (H3Africa) initiative was established to drive the development of genomic research for human health in Africa, and through recognition of the critical role of bioinformatics in this process, spurred the establishment of H3ABioNet, a pan-African bioinformatics network for H3Africa. The limitations in bioinformatics capacity on the continent have been a major contributory factor to the lack of notable outputs in high-throughput biology research. Although pockets of high-quality bioinformatics teams have existed previously, the majority of research institutions lack experienced faculty who can train and supervise bioinformatics students. H3ABioNet aims to address this dire need, specifically in the area of human genetics and genomics, but knock-on effects are ensuring this extends to other areas of bioinformatics. Here, we describe the emergence of genomics research and the development of bioinformatics in Africa through H3ABioNet.

  • Mild covalent functionalization of single-walled carbon nanotubes highlighted by spectroscopic ellipsometry

    Yann Battie, M. Dossot, Naoual Allali, Victor Mamane, Aotmane En Naciri, Laurent Broch, Alexander V. Soldatov
    Carbon, 2016, 96, pp.557-564. ⟨10.1016/j.carbon.2015.09.066⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Single-walled carbon nanotubes (SWCNT) synthesized using the HiPco (R) process and purified thereafter were submitted to two covalent functionalization processes: i) a mild oxidation in a concentrated HNO3 solution using microwave irradiation and ii) a radical functionalization to graft methoxyphenyl groups. The samples were analyzed by Raman spectroscopy and spectroscopic ellipsometry in the energy window 0.07-4.96 eV. The complex dielectric function was analytically calculated in order to extract the real (epsilon(r)) and imaginary (epsilon(i)) parts of this function vs. the incident energy of the light. The ellipsometric data in the infrared part of the spectrum revealed that process i) mainly affected the amorphous carbon deposited on the surface of SWCNTs while process ii) strongly changed the electronic nature of the film due to a charge transfer between methoxyphenyl groups and SWCNTs. These results demonstrate the richness of information that spectroscopic ellipsometry is able to bring about on an entire carbon nanotube ensemble compared to Raman spectroscopy, while not suffering from limitation on their electronic structure and/or aggregate state/presence of surfactants.

  • Amphiphilicity Is a Key Determinant in the Membrane Interactions of Synthetic 14-mer Cationic Peptide Analogues

    M Fillion, M Goudreault, N Voyer, Burkhard Bechinger, M Auger
    Биохимия / Biochemistry, 2016, 55 (49), pp.6919-6930. ⟨10.1021/acs.biochem.6b00961⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Cationic antimicrobial peptides are a component of the innate immune system of several organisms and represent an interesting alternative to fight multiresistant bacteria. In this context, we have elaborated a synthetic peptide scaffold allowing the study of the impact of different molecular determinants on the membrane interactions. The aim of the present study was to elucidate the mechanism of action of two cationic peptides that derive from a neutral 14-mer template peptide and where the hydrophilic portion is composed of a crown ether. The R5R10 peptide is active in the presence of both negatively charged and zwitterionic membranes (nonselective) and adopts an alpha-helical conformation, whereas the R4R11 peptide is more active in the presence of negatively charged membranes (selective) and forms intermolecular beta-sheet structures. Both the membrane topology and the location of the peptides have been assessed using solid-state NMR and attenuated total reflectance Fourier transform infrared spectroscopy. In addition, fluorescence experiments have been performed on different membrane mixtures to evaluate the ability of the peptides to induce a positive curvature to the membrane. Overall, for both the R5R10 and R4R11 peptides, the results are consistent with a mechanism of action similar to the sinking-raft model in which the peptides are mainly lying flat on the membrane surface and impose a bending stress to the membrane, thus leading to the formation of pores. Furthermore, the difference of membrane selectivity between R5R10 and R4R11 peptides is due to their differing amphipathic properties which modulate the membrane activity on zwitterionic model membranes.

  • Alamethicin Supramolecular Organization in Lipid Membranes from (19)F Solid-State NMR

    Evgeny Salnikov, Jesus Raya, M de Zotti, E Zaitseva, C Peggion, G Ballano, C Toniolo, J Raap, Burkhard Bechinger
    Biophysical Journal, 2016, 111 (11), pp.2450-2459. ⟨10.1016/j.bpj.2016.09.048⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Alamethicins (ALMs) are antimicrobial peptides of fungal origin. Their sequences are rich in hydrophobic amino acids and strongly interact with lipid membranes, where they cause a well-defined increase in conductivity. Therefore, the peptides are thought to form transmembrane helical bundles in which the more hydrophilic residues line a water-filled pore. Whereas the peptide has been well characterized in terms of secondary structure, membrane topology, and interactions, much fewer data are available regarding the quaternary arrangement of the helices within lipid bilayers. A new, to our knowledge, fluorine-labeled ALM derivative was prepared and characterized when reconstituted into phospholipid bilayers. As a part of these studies, C(19)F3-labeled compounds were characterized and calibrated for the first time, to our knowledge, for (19)F solid-state NMR distance and oligomerization measurements by centerband-only detection of exchange (CODEX) experiments, which opens up a large range of potential labeling schemes. The (19)F-(19)F CODEX solid-state NMR experiments performed with ALM in POPC lipid bilayers and at peptide/lipid ratios of 1:13 are in excellent agreement with molecular-dynamics calculations of dynamic pentameric assemblies. When the peptide/lipid ratio was lowered to 1:30, ALM was found in the dimeric form, indicating that the supramolecular organization is tuned by equilibria that can be shifted by changes in environmental conditions.

  • How Zn can impede Cu detoxification by chelating agents in Alzheimer's disease: a proof-of-concept study

    Amandine Conte-Daban, Adam Day, Peter Faller, Christelle Hureau
    Dalton Transactions, 2016, 45 (39), pp.15671-15678. ⟨10.1039/C6DT02308H⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    The role of Cu and Zn ions in Alzheimer's disease is linked to the consequences of their coordination to the amyloid-β (Aβ) peptide, i.e. to the modulation of Aβ aggregation and to the production of Reactive Oxygen Species (ROS), two central events of the so-called amyloid cascade. The role of both ions in Aβ aggregation is still controversial. Conversely the higher toxicity of the redox competent Cu ions (compared to the redox inert Zn ions) in ROS production is acknowledged. Thus the Cu ions can be considered as the main therapeutic target. Because Zn ions are present in higher quantity than Cu ions in the synaptic cleft, they can prevent detoxification of Cu by chelators unless they have an unusually high Cu over Zn selectivity. We describe a proof-of-concept study where the role of Zn on the metal swap reaction between two prototypical ligands and the Cu(Aβ) species has been investigated by several complementary spectroscopic techniques (UV-Vis, EPR and XANES). The first ligand has a higher Cu over Zn selectivity relative to the one of Aβ peptide while the second one exhibits a classical Cu over Zn selectivity. How Zn impacts the effect of the ligands on Cu-induced ROS production and Aβ aggregation is also reported.

  • Membrane topologies of the PGLa antimicrobial peptide and a transmembrane anchor sequence by Dynamic Nuclear Polarization/ solid-state NMR spectroscopy OPEN

    Evgeniy Sergeevich Salnikov, Christopher Aisenbrey, Fabien Aussenac, Olivier Ouari, Hiba Sarrouj, Christian Reiter, Paul Tordo, Frank Engelke, Burkhard Bechinger
    Scientific Reports, 2016, 6, pp.20895. ⟨10.1038/srep20895⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Dynamic Nuclear Polarization (DNP) has been introduced to overcome the sensitivity limitations of nuclear magnetic resonance (NMR) spectroscopy also of supported lipid bilayers. When investigated by solid-state NMR techniques the approach typically involves doping the samples with biradicals and their investigation at cryo-temperatures. Here we investigated the effects of temperature and membrane hydration on the topology of amphipathic and hydrophobic membrane polypeptides. Although the antimicrobial PGLa peptide in dimyristoyl phospholipids is particularly sensitive to topological alterations, the DNP conditions represent well its membrane alignment also found in bacterial lipids at ambient temperature. With a novel membrane-anchored biradical and purpose-built hardware a 17-fold enhancement in NMR signal intensity is obtained by DNP which is one of the best obtained for a truly static matrix-free system. Furthermore, a membrane anchor sequence encompassing 19 hydrophobic amino acid residues was investigated. Although at cryotemperatures the transmembrane domain adjusts it membrane tilt angle by about 10 degrees, the temperature dependence of two-dimensional separated field spectra show that freezing the motions can have beneficial effects for the structural analysis of this sequence.

  • Cavitand Scission by Transition-Metal Centres – Cleaved Cavitand Chirality and Its Consequences

    Thierry Chavagnan, David Semeril, Dominique Matt, Loic Toupet, Jack Harrowfield, Richard Welter
    European Journal of Inorganic Chemistry, 2016, 2016 (4), pp.497-502. ⟨10.1002/ejic.201501089⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Two molecules of the phosphine cavitand 5-diphenylphosphanyl-4(24),6(10),12(16),18(22)-tetramethylenedioxy-2,8,14,20-tetrapentylresorcin[4]arene (1) each underwent cleavage of an O–CH2O bond when treated with 1 equiv. of [Ni(η5-C5H5)(1,5-cyclooctadiene)]BF4 to form a bis(phosphino–phenolato) complex (2) without a cyclopentadienyl ligand. The partially cleaved (P,O) ligands in 2 are chiral, and a single-crystal X-ray structure determination of 2 has shown that the complex molecule has close to twofold rotational symmetry with both ligand units in the same absolute configuration. As expected, the primary coordination sphere has a cis-NiO2P2 geometry. In contrast, C–O bond breaking occurred only once per metal centre when 1 was treated with [RuBr2(p-cymene)]2. This led to a crystallographically characterised complex [RuBr(P,O)(p-cymene)] (4) along with a minor amount of a species (5) that is assumed to be a stereoisomer. Upon crystallisation of 4, two distinct types of crystals were isolated from the same solution; some of these were the racemic compound, while the others were the racemic conglomerate

  • Covalent Tethering and Residues with Bulky Hydrophobic Side Chains Enable Self-Assembly of Distinct Amyloid Structures

    Jérémy Ruiz, Régis Boehringer, Marcel Grogg, Jesus Raya, Alicia Schirer, Corinne Crucifix, Petra Hellwig, Patrick Schultz, Vladimir Torbeev
    ChemBioChem, 2016, 17 (23), pp.2274-2285. ⟨10.1002/cbic.201600440⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Polymorphism is a common property of amyloid fibers that complicates their detailed structural and functional studies. Here we report experiments illustrating the chemical principles that enable the formation of amyloid polymorphs with distinct stoichiometric composition. Using appropriate covalent tethering we programmed self-assembly of a model peptide corresponding to the [20-41] fragment of human β2-microglobulin into fibers with either trimeric or dimeric amyloid cores. Using a set of biophysical and biochemical methods we demonstrated their distinct structural, morphological, and templating properties. Furthermore, we showed that supramolecular approaches in which the peptide is modified with bulky substituents can also be applied to modulate the formation of different fiber polymorphs. Such strategies, when applied to disease-related peptides and proteins, will greatly help in the evaluation of the biological properties of structurally distinct amyloids.

  • Formation of reactive nitrogen species including peroxynitrite in physiological buffer exposed to cold atmospheric plasma

    Fanny Girard, Vasilica Badets, Sylvie Blanc, Kristaq Gazeli, Laurent Marlin, Laurent Authier, P. Svarnas, N. Sojic, Franck Clement, Stéphane Arbault
    RSC Advances, 2016, 6 (82), pp.78457-78467. ⟨10.1039/c6ra12791f⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    Cold Atmospheric Plasmas (CAPs) or Non Thermal Plasmas (NTPs) are increasingly used for biomedical applications. Herein, we studied the interactions of such CAPs, typically atmospheric ionization waves produced in a helium–nitrogen mixture (He/1% N2) with a commonly used physiological liquid in biology, e.g. Phosphate Buffered Saline solution (PBS) at pH 7.4. Optical Emission Spectroscopy (OES) of the plasma phase revealed the formation in the He/1% N2 CAP of nitric oxide NO and hydroxyl HO˙ derivatives which can lead to numerous Reactive Oxygen and Nitrogen Species (RONS) after dissolution in the exposed PBS. Chemical changes in solution were first assessed by conductimetry and pHmetry; these experiments showed that an evaporation of the solution occurred under gas exposition and was amplified by the CAPs, being mostly related to the interaction between the ionization wave and the gas flow. Further, UV-visible absorption spectroscopy was used to identify and quantify long-lived RONS, namely nitrite (NO2−), nitrate (NO3−), as well as a short-lived species, i.e. peroxynitrite anion (ONOO−). The production in physiological solution of ONOO− under CAP exposure is demonstrated for the first time, based on experiments at two pH conditions (7.4 and 12) and on the analysis of decomposition kinetics of this unstable species. The combination of complementary physico-chemical techniques allows to decipher the complex reactivity of CAPs from the plasma phase to the liquid phase.

  • Stretch-Induced Helical Conformations in Poly( l -lysine)/Hyaluronic Acid Multilayers

    Sarah Zahouani, Alain Chaumont, Bernard Senger, Fouzia Boulmedais, Pierre Schaaf, Loïc Jierry, Philippe Lavalle
    ACS Applied Materials & Interfaces, 2016, 8 (24), pp.14958-14965. ⟨10.1021/acsami.5b08302⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    We investigate the effect of stretching on the secondary structure of cross-linked poly(l-lysine)/hyaluronic acid (PLL/HA) multilayers. We show that stretching these films induces changes in the secondary structure of PLL chains. Our results suggest that not only α- but also 310-helices might form in the film under stretching. Such 310-helices have never been observed for PLL so far. These changes of the secondary structure of PLL are reversible, i.e., when returning to the nonstretched state one recovers the initial film structure. Using molecular dynamics simulations of chains composed of 20 l-lysine residues (PLL20), we find that these chains never adopt a helical conformation in water. In contrast, when the end-to-end distance of the chains is restrained to values smaller than the mean end-to-end distance of free chains, a distance domain rarely explored by the free chains, helical conformations become accessible. Moreover, the formation of not only α- but also 310-helices is predicted by the simulations. These results suggest that the change of the end-to-end distance of PLL chains in the stretched film is at the origin of the helix formation.

  • Crystal structures of a copper(II) and the isotypic nickel(II) and palladium(II) complexes of the ligand (E)-1-[(2,4,6-tribromophenyl)diazenyl]naphthalen-2-ol

    Souheyla Chetioui, Djamil-Azzeddine Rouag, Jean-Pierre Djukic, Christian Bochet, Rachid Touzani, Corinne Bailly, Aurelien Crochet, Katharina Fromm
    Acta crystallographica Section E : Crystallographic communications [2015-..], 2016, 72 (8), pp.1093-1098. ⟨10.1107/S205698901601080X⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    In the copper(II) complex, bis{(E)-1-[(2,4,6-tribromophenyl)diazenyl]naphthalen-2-olato}copper(II), [Cu(C16H8Br3N2O)2], (I), the metal cation is coordinated by two N atoms and two O atoms from two bidentate (E)-1-[(2,4,6-tribromophenyl)diazenyl]naphthalen-2-olate ligands, forming a slightly distorted square-planar environment. In one of the ligands, the tribromobenzene ring is inclined to the naphthalene ring system by 37.4 (5)°, creating a weak intramol. Cu···Br interaction [3.134 (2) Å], while in the other ligand, the tribromobenzene ring is inclined to the naphthalene ring system by 72.1 (6)°. In the isotypic nickel(II) and palladium(II) complexes, namely bis{(E)-1-[(2,4,6-tribromophenyl)diazenyl]naphthalen-2-olato}nickel(II), [Ni(C16H8Br3N2O)2], (II), and bis{(E)-1-[(2,4,6-tribromophenyl)diazenyl]naphthalen-2-olato}palladium(II), [Pd(C16H8Br3N2O)2], (III), resp., the metal atoms are located on centers of inversion, hence the metal coordination spheres have perfect square-planar geometries. The tribromobenzene rings are inclined to the naphthalene ring systems by 80.79 (18)° in (II) and by 80.8 (3)° in (III). In the crystal of (I), mols. are linked by C-H···Br hydrogen bonds, forming chains along [010]. The chains are linked by C-H···π interactions, forming sheets parallel to (011). In the crystals of (II) and (III), mols. are linked by C-H···π interactions, forming slabs parallel to (10-1). For the copper(II) complex (I), a region of disordered electron d. was cor. for using the SQUEEZE routine in PLATON [Spek (2015). Acta Cryst. C71, 9-18]. The formula mass and unit-cell characteristics of the disordered solvent mols. were not taken into account during refinement. [on SciFinder(R)]

  • Chlorido{(E)-1-[(2-methoxyphenyl)diazenyl]naphthalen-2-olato}palladium(II).

    Assia Mili, Souheyla Chetioui, Djamil-Azzeddine Rouag, Jean-Pierre Djukic, Corinne Bailly
    IUCrData, 2016, 1 (4), ⟨10.1107/s241431461600691x⟩ | Publiée le 1 janvier 2016
    Article dans une revue

    In the title complex, [Pd(C17H13N2O2)Cl], the PdII atom is tetracoordinated by an N and two O atoms of an (E)-1-[(2-methoxyphenyl)diazenyl]naphthalen-2-olate ligand and by a Cl atom, and has a square-planar coordination. In the crystal, mols. are linked by pairs of C-H···Cl hydrogen bonds, forming inversion dimers. The dimers are linked via offset π-π interactions [intercentroid distance = 3.546 (3) Å], forming chains running parallel to [100]. [on SciFinder(R)]

  • Crystal structure of bis{μ-1-[(E)-(3-methoxyphenyl)diazenyl]naphthalen-2-olato-κ3N2,O:O}bis({1-[(E)-(3-methoxyphenyl)diazenyl]naphthalen-2-olato-κ2N2,O}copper(II)).

    Souheyla Chetioui, Noudjoud Hamdouni, Christian Bochet, Jean-Pierre Djukic, Corinne Bailly
    Acta Crystallographica Section E: Crystallographic Communications, 2015, 71 (12), ⟨10.1107/S2056989015020824⟩ | Publiée le 1 décembre 2015
    Article dans une revue

    The title dinuclear CuII complex, [Cu2(C17H13N2O2)4], is located on an inversion center. The CuII atoms are each five-coordinated in a distorted square-pyramidal geometry by two N atoms and two O atoms from two bidentate ligands and one bridging O atom from another ligand. In the dinuclear complex, the Cu···Cu sepn. is 3.366 (3) Å. In the crystal, complex mols. are linked via weak C-H···O hydrogen bonds, forming a layer parallel to (-101). [on SciFinder(R)]

  • Palladium-catalysed Suzuki―Miyaura cross-coupling with imidazolylidene ligands substituted by crowded resorcinarenyl and calixarenyl units

    Neslihan Sahin, David Semeril, Eric Brenner, Dominique Matt, Cemal Kaya, Loic Toupet
    Turkish Journal of Chemistry, 2015, 39 (6), pp.1171--1179. ⟨10.3906/kim-1503-82⟩ | Publiée le 1 décembre 2015
    Article dans une revue

    Two N -heterocyclic carbene (NHC) palladium complexes of formula [PdBr2 (NHC)(pyridine)] in which the carbenic ring is anked by sterically crowded cavitand substituents were prepared from appropriate imidazolium salts bearing either two resorcinarene or a combination of resorcinarene and calixarene fragments. Both complexes displayed high stability and good activities in the cross-coupling of aryl bromides with phenyl boronic acid. One of the imidazolium salts was characterised by an X-ray diffraction study.

  • Copper-Catalysed Allylic Substitution Using 2,8,14,20-Tetrapentylresorcinarenyl-Substituted Imidazolium Salts

    Murat Kaloğlu, Neslihan Şahin, David Semeril, Eric Brenner, Dominique Matt, İsmail Özdemir, Cemal Kaya, Loic Toupet
    European Journal of Organic Chemistry, 2015, 2015 (33), pp.7310--7316. ⟨10.1002/ejoc.201501070⟩ | Publiée le 1 novembre 2015
    Article dans une revue

    Unsymmetrical imidazolium salts, each having one nitrogen atom (N1) substituted by a cavity-shaped TPR group (TPR = 2,8,14,20-tetrapentylresorcinaren-5-yl), were tested in situ as proligands for the copper-catalysed allylic arylation of cinnamyl bromide with arylmagnesium halides. The catalytic systems produced mixtures of linear (l) and branched (b) arylated compounds in variable proportions, with the b/l ratio being the highest (78:22) for the most crowded imidazolium salt used, namely that in which the second nitrogen atom (N2) was substituted by a mesityl group. An N-heterocyclic carbene complex obtained from one of the imidazolium salts was characterised by an X-ray diffraction study

  • A stereoselective access to a ferrocene-based planar chiral triazolium salt

    Gwénaël Forcher, Andrew Silvanus, Pierre de Frémont, Béatrice Jacques, Morwenna S.M. Pearson-Long, Fabien Boeda, Philippe Bertus
    Journal of Organometallic Chemistry, 2015, 797, pp.1-7. ⟨10.1016/j.jorganchem.2015.07.038⟩ | Publiée le 1 novembre 2015
    Article dans une revue

    The first synthesis of a triazolium salt with ferrocene-based planar chirality is described. It was obtained from enantiopure Kagan's acetal, via the construction of a lactam intermediate. The corresponding 1,2,4-triazolylidene-Cu(I) complex was prepared. Its structure as well as the parent triazolium salt were characterized by X-ray diffraction analysis.

  • Oxidative Coupling of an Enaminoporphyrin: C−C, N−N Linkages or Both?

    Angel J. Jimenez, Noelia Sabater Mesa, Ana Mafalda V. M. Pereira, Marion Jean, Bruno Vincent, Christophe Jeandon, Jean-Paul Gisselbrecht, Romain Ruppert
    Asian Journal of Organic Chemistry, 2015, 4 (11), pp.1294 - 1300. ⟨10.1002/ajoc.201500279⟩ | Publiée le 1 novembre 2015
    Article dans une revue

    A symmetrical bis-nickelporphyrin was prepared in very good yield by oxidative coupling of a nickel(II) enaminoporphyrin. This dimer was obtained by the intermolecular reaction of the starting enamine (acting as nucleophile) with the porphyrin radical cation (acting as electrophile) generated in situ. Alternatively, by using different reaction conditions, an N-N linked porphyrin dimer was obtained in moderate yield. The monomeric extended porphyrin leading to the N-N linked dimer was obtained by the intramolecular reaction of the same radical cation with the neighbouring meso-aryl group (acting as nucleophile).

  • Relative Lability and Chemoselective Transmetallation of NHC in Hybrid Phosphine‐NHC Ligands: Access to Heterometallic Complexes

    Thomas Simler, Pierre Braunstein, Andreas Danopoulos
    Angewandte Chemie International Edition, 2015, 54 (46), pp.13691-13695. ⟨10.1002/anie.201505958⟩ | Publiée le 14 octobre 2015
    Article dans une revue

    Abstract The relative lability and transmetallation aptitude of trialkylphosphine and NHC donors, integrated in semi‐rigid hybrid ligands attached to [Ag 4 Br 4 ] pseudo‐cubanes, lies in favor of the NHC and is used to selectively access unprecedented NHC complexes with heterobimetallic cores, such as Ag–Cu ( 4 Cy ) and Ag–Ir ( 5 t Bu ). These can be viewed as an arrested state before the full transmetallation of both donors, which gives the homodinuclear Cu ( 3 Cy ) and Ir ( 6 Cy ) complexes. The observed NHC transmetallation aptitude and reactivity urges caution in the common notion that views the NHC as a universal spectator.

  • Transformation of CO 2 to Value-Added Materials

    Rebecca Shu Hui Khoo, He-Kuan Luo, Pierre Braunstein, T. Hor
    Journal of Molecular and Engineering Materials, 2015, 03 (01n02), pp.1540007. ⟨10.1142/S2251237315400079⟩ | Publiée le 6 octobre 2015
    Article dans une revue

    Carbon dioxide ( CO 2 ) is an attractive C1 resource because it is cheap and abundant and its more extensive use would be beneficial for the environment. However, its high thermodynamic stability and poor reactivity have seriously limited its utilization as a ready carbon source. The scientific challenges facing CO 2 transformation are accordingly very attractive. This paper summarizes recent advances made in transformation of CO 2 to value-added high-molecular-weight materials such as polymers, star-shaped molecules and nanocarbons.

  • Insights into the Complexity of Weak Intermolecular Interactions Interfering in Host-Guest Systems

    Dawei Zhang, Bastien Chatelet, Eloisa Serrano, Olivier Perraud, Jean-Pierre Dutasta, Vincent Robert, Alexandre Martinez
    ChemPhysChem, 2015, 16 (14), pp.2931-2935. ⟨10.1002/cphc.201500610⟩ | Publiée le 5 octobre 2015
    Article dans une revue

    The recognition properties of heteroditopic hemicryptophane hosts towards anions, cations, and neutral pairs, combining both cation-pi and anion-pi interaction sites, were investigated to probe the complexity of interfering weak intermolecular interactions. It is suggested from NMR experiments, and supported by CASSCF/CASPT2 calculations, that the binding constants of anions can be modulated by a factor of up to 100 by varying the fluorination sites on the electron-poor aromatic rings. Interestingly, this subtle chemical modification can also reverse the sign of cooperativity in ion-pair recognition. Wavefunction calculations highlight how short-and long-range interactions interfere in this recognition process, suggesting that a disruption of anion-p interactions can occur in the presence of a co-bound cation. Such molecules can be viewed as prototypes for examining complex processes controlled by the competition of weak interactions.

  • Magainin 2-PGLa interactions in membranes -two peptides that exhibit synergistic enhancement of antimicrobial activity

    Arnaud Marquette, Evgeniy S. Salnikov, Elise Glattard, Christopher Aisenbrey, Burkhard Bechinger
    Current Topics in Medicinal Chemistry, 2015, 16 (1), pp.65-75. ⟨10.2174/1568026615666150703115701⟩ | Publiée le 16 septembre 2015
    Article dans une revue

    <div><p>The structural requirements for the synergistic enhancement of antimicrobial activities of the cationic linear peptides PGLa and magainin 2 were investigated. In a first step the antimicrobial activities were evaluated for a number of modifications of the sequences and equimolar mixtures thereof. In particular fluorophore labelled peptides maintain a high degree of antimicrobial activity and considerable synergism when tested conjointly. Thereafter, circular dichroism spectroscopy indicated that these extended sequences adopt helical conformations in the presence of model membranes similar to the unmodified sequences. Energy transfer between the fluorophores suggested that the peptides reside in close proximity to each other when bound to the membrane surface at high concentrations. The fluorophore interactions quickly diminish at lower peptide-to-lipid ratios indicating that the peptide-peptide interactions are weak. Furthermore, 15 N solidstate NMR measurements of the membrane topology of [ 15 N-Ala14]-PGLa and of its fluorophore-carrying analogue reconstituted into supported 1, 2-didecanoyl-sn-glycero-3-phosphocholine bilayers were performed. These experiments revealed no correlation between the topological state of PGLa and the observed synergistic enhancement of antimicrobial activities due to the presence of magainins. These results suggest that lipid mediated interactions rather than the formation of tight peptide-peptide complexes in the membrane are responsible for synergistic activities of the mixtures.</p></div>

  • Involvement of Acidic Amino Acid Residues in Zn(2+) Binding to Respiratory Complex I

    Sébastien Kriegel, Batoul Srour, Stefan Steimle, Thorsten Friedrich, Petra Hellwig
    ChemBioChem, 2015, 16 (14), pp.2080-2085. ⟨10.1002/cbic.201500273⟩ | Publiée le 15 septembre 2015
    Article dans une revue

    Proton transfer across membranes and membrane proteins is a central process in biological systems. Zn(2+) ions are capable of binding to acidic residues, often found within such specific pathways, thereby leading to a blockage. Here we probed Zn(2+) inhibition of the proton-pumping NADH:ubiquinone oxidoreductase from Escherichia coli by means of electrochemically induced FTIR difference spectroscopy. Numerous conformational changes were identified including those that arise from the reorganization of the membrane arm upon electron transfer in the peripheral arm of the protein. Signals at very high wavenumbers (1781 and 1756 cm(-1)) point to the perturbation of acidic residues in a highly hydrophobic environment upon Zn(2+) binding. In variant D563N(L), which lacks part of the proton pumping activity (residue located on the horizontal amphipathic helix), the spectral signature of Zn(2+) binding is changed. Our data support a role for this residue in proton translocation.

  • The anti-inflammatory action of the analgesic kyotorphin neuropeptide derivatives: insights of a lipid-mediated mechanism

    K Conceicao, P Magalhaes, S Campos, M Domingues, V Ramu, M Michalek, Philippe Bertani, A Baptista, M Heras, E Bardaji, Burkhard Bechinger, M Ferreira, M Castanho
    Amino Acids, 2015, 48 (1), pp.307-18. ⟨10.1007/s00726-015-2088-9⟩ | Publiée le 7 septembre 2015
    Article dans une revue

    Recently, a designed class of efficient analgesic drugs derived from an endogenous neuropeptide, kyotorphin (KTP, Tyr-Arg) combining C-terminal amidation (KTP-NH2) and N-terminal conjugation to ibuprofen (Ib), IbKTP-NH2, was developed. The Ib moiety is an enhancer of KTP-NH2 analgesic action. In the present study, we have tested the hypothesis that KTP-NH2 is an enhancer of the Ib anti-inflammatory action. Moreover, the impact of the IbKTP-NH2 conjugation on microcirculation was also evaluated by a unified approach based on intravital microscopy in the murine cremasteric muscle. Our data show that KTP-NH2 and conjugates do not cause damage on microcirculatory environment and efficiently decrease the number of leukocyte rolling induced by lipopolysaccharide (LPS). Isothermal titration calorimetry showed that the drugs bind to LPS directly thus contributing to LPS aggregation and subsequent elimination. In a parallel study, molecular dynamics simulations and NMR data showed that the IbKTP-NH2 tandem adopts a preferential "stretched" conformation in lipid bilayers and micelles, with the simulations indicating that the Ib moiety is anchored in the hydrophobic core, which explains the improved partition of IbKTP-NH2 to membranes and the permeability of lipid bilayers to this conjugate relative to KTP-NH2. The ability to bind glycolipids concomitant to the anchoring in the lipid membranes through the Ib residue explains the analgesic potency of IbKTP-NH2 given the enriched glycocalyx of the blood-brain barrier cells. Accumulation of IbKTP-NH2 in the membrane favors both direct permeation and local interaction with putative receptors as the location of the KTP-NH2 residue of IbKTP-NH2 and free KTP-NH2 in lipid membranes is the same.

  • Sequential oxidation of Jasmonoyl-Phenylalanine and Jasmonoyl-Isoleucine by multiple cytochrome P450 of the CYP94 family through newly identified aldehyde intermediates

    Émilie Widemann, Bernard Grausem, Hugues Renault, Emmanuelle Pineau, Clément Heinrich, Raphaël Lugan, Pascaline Ullmann, Laurence Miesch, Yann Aubert, Michel Miesch, Thierry Heitz, Franck Pinot
    Phytochemistry, 2015, 117, pp.388-399. ⟨10.1016/j.phytochem.2015.06.027⟩ | Publiée le 1 septembre 2015
    Article dans une revue

    The role and fate of Jasmonoyl-Phenylalanine (JA-Phe), an understudied conjugate in the jasmonate pathway remain to be unraveled. We addressed here the possibility of JA-Phe oxidative turnover by cytochrome P450s of the CYP94 family. Leaf wounding or fungal infection in Arabidopsis resulted in accumulation of JA-Phe, 12-hydroxyl (12OH-JA-Phe) and 12-carboxyl (12COOH-JA-Phe) derivatives, with patterns differing from those previously described for Jasmonoyl-Isoleucine. In vitro, yeast-expressed cytochromes P450 CYP94B1, CYP94B3 and CYP94C1 differentially oxidized JA-Phe to 12-hydroxyl, 12-aldehyde and 12-carboxyl derivatives. Furthermore, a new aldehyde jasmonate, 12CHO-JA-Ile was detected in wounded plants. Metabolic analysis of CYP94B3 and CYP94C1 loss- and gain-of-function plant lines showed that 12OH-JA-Phe was drastically reduced in cyp94b3 but not affected in cyp94c1, while single or double mutants lacking CYP94C1 accumulated less 12COOH-JA-Phe than WT plants. This, along with overexpressing lines, demonstrates that hydroxylation by CYP94B3 and carboxylation by CYP94C1 accounts for JA-Phe turnover in planta. Evolutionary study of the CYP94 family in the plant kingdom suggests conserved roles of its members in JA conjugate homeostasis and possibly in adaptative functions. Our work extends the range and complexity of JA-amino acid oxidation by multifunctional CYP94 enzymes in response to environmental cues.

  • N-Phosphanyl- and N,N ′-Diphosphanyl-Substituted N-Heterocyclic Carbene Chromium Complexes: Synthesis, Structures, and Catalytic Ethylene Oligomerization

    Pengfei Ai, Andreas Danopoulos, Pierre Braunstein
    Organometallics, 2015, 34 (16), pp.4109-4116. ⟨10.1021/acs.organomet.5b00547⟩ | Publiée le 24 août 2015
    Article dans une revue

    The chromium(II) complexes [CrCl2(t-BuNHC,P-κC)2] (1), [CrCl2(MesNHC,P-κC)2] (2), [CrCl2(DippNHC,P-κC)2] (3), and [CrCl2(P,NHC,P-κC)2] (4) containing the N-phosphanyl- or N,N′-diphosphanyl-substituted N-heterocyclic carbene (NHC) hybrid ligands t-BuNHC,P (1-(di-tert-butylphosphino)-3-tert-butylimidazol-2-ylidene), MesNHC,P (1-(di-tert-butylphosphino)-3-mesitylimidazol-2-ylidene), DippNHC,P (1-(di-tert-butylphosphino)-3-(2,6-diisopropylphenyl)imidazol-2-ylidene), and P,NHC,P (1,3-bis(di-tert-butylphosphino)imidazol-2-ylidene), respectively, were prepared from CrII ([CrCl2(thf)2]) or CrIII ([CrCl3(thf)3] or [Cr(Me)Cl2(thf)3]) precursors. The solid-state structures of these four complexes show square-planar CrII centers, with two trans chloride and two monodentate CNHC donors. Alkylation of 3 and 4 with [Mg(benzyl)2(thf)2] led to the formation of the σ complexes [Cr(benzyl)3(DippNHC,P-κC,κP)] (5) and [Cr(benzyl)3(P,NHC,P-κC,κP)] (6), respectively, with five-coordinate distorted-square-pyramidal CrIII coordination, comprising a chelating ligand through the CNHC and one P donor and three benzyl groups. These complexes were used as precatalysts in ethylene oligomerization, and it was found that the nature of the cocatalyst used and the metal oxidation state have a remarkable influence on the catalytic properties. The CrIII/MAO systems displayed superior catalytic performance (TOF values up to 16320 mol of C2H4/((mol of Cr) h) for 6) and gave mostly oligomers. Interestingly, the oligomers obtained with complex 3 were almost exclusively 1-hexene and 1-butene when the reaction was initiated at 30 °C. The overall activities and selectivities were also affected by the initial reaction temperature and the nature of the solvent. With AlEtCl2 (EADC) as cocatalyst, polyethylene was predominately formed.

  • Trapping Nanostructures on Surfaces through Weak Interactions

    Vivien Rauch, Yoshihirok Ikkawa, Matthieu Koepf, Ismail Hijazi, Stéphane Campidelli, Antoine Goujon, Masatoshik Anesato, Jean Weiss
    Chemistry - A European Journal, 2015, 21, pp.13437-13444. ⟨10.1002/chem.201501767⟩ | Publiée le 12 août 2015
    Article dans une revue

    The assembly of imidazole-functionalized phenan-throline-strapped zinc porphyrins (ZnPorphen)w ith alkyl or polyethylene glycol (PEG) side chains was studied in solution and by AFM after casting on highly oriented pyrolytic graphite (HOPG) or mica. The natureo ft he solvent and its evaporation time influenced the morphology of the objectso b-served.O nH OPG, short rods of about 100 nm were observed after fast evaporation of solutions of the alkyl derivatives in CHCl 3 ,T HF,o rp yridine, whereas islands of aligned rows of longer wires were obtained from methylcyclohexane (MCH). Slow evaporation of MCH led to at hree-dimensional assembly. The PEG porphyrin assembled into short wires on HOPG or fibers on mica after slow evaporation of solutions in THF.T his study shows the role of surface–molecule interactions in the interfacial assembly of ZnPorphen derivatives and contributes to understanding the parameters that control their noncovalent assembly into molecular wires on as urface.

  • Covalent Functionalization of HiPco Single-Walled Carbon Nanotubes: Differences in the Oxidizing Action of H2SO4 and HNO3 during a Soft Oxidation Process

    Xavier Devaux, Brigitte Vigolo, Edward Mcrae, Fabrice Valsaque, Naoual Allali, Victor Mamane, Yves Fort, Alexander V. Soldatov, M. Dossot, Svetlana Yu. Tsareva
    ChemPhysChem, 2015, 16 (12), pp.2692-2701. ⟨10.1002/cphc.201500248⟩ | Publiée le 1 août 2015
    Article dans une revue

    The results of a study on the evolution of HiPco single-walled carbon nanotubes during the oxidizing action of H2SO4 and HNO3 are presented. The process conditions used have been chosen so as to avoid any significant damage to the nanotube structure. The type and level of functionalization, the location of the grafted functions on the surface of the nanotube and the changes in morphological characteristics of the samples were examined by using a wide and complementary range of analytical techniques. We propose an explanation for the differences in the oxidizing action of sulfuric and nitric acids. The combined results allow us to suggest possible reaction mechanisms that occur on the surface of the nanotube.

  • Highly luminescent charge-neutral europium( iii ) and terbium( iii ) complexes with tridentate nitrogen ligands

    Kuppusamy Senthil Kumar, Bernhard Schäfer, Sergei Lebedkin, Lydia Karmazin, Manfred Kappes, Mario Ruben
    Dalton Transactions, 2015, 44 (35), pp.15611-15619. ⟨10.1039/c5dt02186c⟩ | Publiée le 30 juillet 2015
    Article dans une revue

    We report the synthesis and efficient photoluminescence of charge-neutral lanthanide (Ln = Eu 3+ and Tb 3+ ) complexes based on pyrazole–pyridine–tetrazole and pyrazole–pyridine–triazole ligands.

  • C35 Hopanoid Side Chain Biosynthesis: Reduction of Ribosylhopane into Bacteriohopanetetrol by a Cell-Free System Derived from Methylobacterium organophilum

    Anne Bodlenner, Wenjun Liu, Guillaume Hirsch, Philippe Schaeffer, Martin Blumenberg, Ralf Lendt, Denis Tritsch, Walter Michaelis, Michel Rohmer
    ChemBioChem, 2015, 16 (12), pp.1764-1770. ⟨10.1002/cbic.201500021⟩ | Publiée le 14 juillet 2015
    Article dans une revue

    The major bacterial triterpenoids of the hopane series each consist of a C30 triterpene hopane moiety and an additional nonterpene C5 side chain derived from d-ribose and linked through its C-5 carbon atom to the hopane side chain. Bacteriohopanetetrol and aminobacteriohopanetriol are the most common representatives of this natural product series, adenosylhopane and ribosylhopane being putative precursors. Deuterium- labelled ribosylhopane was obtained by hemisynthesis and converted into deuterium-labelled bacteriohopanetetrol in the presence of NADPH, thus giving evidence of this as yet unknown precursor-to-product relationship in the bacterial hopanoid metabolic pathway.

  • Adsorption phenomena of cubane-type tetranuclear Ni(II) complexes with neutral, thioether-functionalized ligands on Au(111)

    Volkmar Heß, Frank Matthes, Daniel E. Bürgler, Kirill Yu. Monakhov, Claire Besson, Paul Kögerler, Alessio Ghisolfi, Pierre Braunstein, Claus M. Schneider
    Surface Science : A Journal Devoted to the Physics and Chemistry of Interfaces, 2015, 641, pp.210-215. ⟨10.1016/j.susc.2015.06.026⟩ | Publiée le 11 juillet 2015
    Article dans une revue

    The controlled and intact deposition of molecules with specific properties onto surfaces is an emergent field impacting a wide range of applications including catalysis, molecular electronics, and quantum information processing. One strategy is to introduce grafting groups functionalized to anchor to a specific surface. While thiols and disulfides have proven to be quite effective in combination with gold surfaces, other S-containing groups have received much less attention. Here, we investigate the surface anchoring and organizing capabilities of novel charge-neutral heterocyclic thioether groups as ligands of polynuclear nickel(II) complexes. We report on the deposition of a cubane-type {Ni4} (= [Ni(μ3-Cl)Cl(HL·S)]4) single-molecule magnet from dichloromethane solution on a Au(111) surface, investigated by scanning tunneling microscopy, X-ray photoelectron spectroscopy, and low-energy electron diffraction, both immediately after deposition and after subsequent post-annealing. The results provide strong evidence for partial decomposition of the coordination complex upon deposition on the Au(111) surface that, however, leaves the magnetic {Ni4Cl4n} (n = 1 or 2) core intact. Only post-annealing above 480 K induces further decomposition and fragmentation of the {Ni4Cl4n} core. The detailed insight into the chemisorption-induced decomposition pathway not only provides guidelines for the deposition of thioether-functionalized Ni(II) complexes on metallic surfaces but also reveals opportunities to use multidentate organic ligands decorated with thioether groups as transporters for highly unstable inorganic structures onto conducting surfaces, where they are stabilized retaining appealing electronic and magnetic properties.

  • Influence of the reaction temperature on the oxygen reduction reaction on nitrogen-doped carbon nanotube catalysts

    Lai Truong-Phuoc, Cuong Duong-Viet, Won-Hui Doh, Antoine Bonnefont, Izabela Janowska, Dominique Begin, Elena R. Savinova, Pascal Granger, Cuong Pham-Huu
    Catalysis Today, 2015, Catalysis Today, 249, pp.236-243. ⟨10.1016/j.cattod.2014.11.020⟩ | Publiée le 1 juillet 2015
    Article dans une revue

    Nitrogen-doped carbon nanotubes (N-CNT) were synthesized at 700 °C via the chemical vapour deposition (CVD) method and were used as catalysts in the oxygen reduction reaction (ORR) in 0.1 M KOH. The activity toward the ORR and the stability of these N-CNTs in alkaline solution were studied as a function of the reaction temperature and of the chemical treatment applied to the catalyst. The kinetic analysis of these catalysts was also carried out and compared to the ORR performance of the commercial Pt/C Vulcan XC72 catalyst. N-CNT-700BW catalyst without any chemical treatment after the CVD synthesis, possesses a half-wave potential E1/2 of approximately 0.82 V vs. RHE, 50 mV lower than the E1/2 value of Pt/C catalyst and a specific current density Jk at 0.9 V = 5.46 mA/mg at T = 25 °C. Removal of the major part of the iron growth catalyst by a chemical treatment resulted in a strongly decreased but still measurable activity. The activation energy of the N-CNT-based catalyst was calculated and is around 38 kJ mol−1 at an ORR overpotential of 300 mV. Increasing the temperature of the electrolyte up to 75 °C leads to a positive shift of the half-wave potential of the reaction as well as an increase of the H2O2 escape. The long-term stability test has also been conducted and indicates a good stability of the activity of the N-CNT-based catalysts under operation in alkaline media.

  • Experimental and theoretical investigation in the stereoselective synthesis of P-stereogenic phosphine oxides

    L. Copey, L. Jean-Gérard, E. Framery, G. Pilet, V. Robert, B. Andrioletti
    Chemistry - A European Journal, 2015, 21 (25), pp.9057-9061. ⟨10.1002/chem.201501324⟩ | Publiée le 15 juin 2015
    Article dans une revue

    An efficient enantioselective strategy for the synthesis of variously substituted phosphine oxides has been developed, incorporating the use of (1S,2S)-2-aminocyclohexanol as the chiral auxiliary. The method relies on three key steps: 1) Highly diastereoselective formation of PV oxazaphospholidine, rationalized by a theoretical study; 2) highly diastereoselective ring-opening of the oxazaphospholidine oxide with organometallic reagents that takes place with inversion of configuration at the P atom; 3) enantioselective synthesis of phosphine oxides by cleavage of the remaining P[BOND]O bond. Interestingly, the use of a PIII phosphine precursor afforded a P-epimer oxazaphospholidine. Hence, the two enantiomeric phosphine oxides can be synthesized starting from either a PV or a PIII phosphine precursor, which constitutes a clear advantage for the stereoselective synthesis of sterically hindered phosphine oxides.

  • Bis-(ether-functionalized NHC) nickel(II) complexes, trans to cis isomerization triggered by water coordination and catalytic ethylene oligomerization.

    Sophie Hameury, Pierre de Frémont, Pierre Braunstein, Pierre-Alain Breuil, Hélène Olivier-Bourbigou
    Organometallics, 2015, 34 (11), pp.2183-2201. ⟨10.1021/om5008506⟩ | Publiée le 8 juin 2015
    Article dans une revue

    The new nickel(II) complexes containing NHC ligands N-substituted by a CH2CH2OR ether group (R = Me or Ph) [NiCl2{ImMes(C2OMe)}2] (6), [NiCl2{Imn-Bu(C2OMe)}2] (7), [NiBr2{ImDiPP(C2OMe)}2] (8), [NiBr2{ImMes(C2OMe)}2] (9), [NiBr2{Imn-Bu(C2OMe)}2] (10), NiBr2{ImMes(C2OPh)}2] (18), [NiI2{ImDiPP(C2OMe)}2] (21), [NiI2{ImMes(C2OMe)}2] (22) and [NiI2{Imn-Bu(C2OMe)}2] (23) were synthesized in good yields and fully characterized by NMR spectroscopy and X-ray diffraction analysis. The reaction conditions were optimized and further applied to thioether or non-functionalized NHC ligands, affording [NiBr2{ImDiPP(C2SPh)}2] (19) and [NiBr2{ImDiPP(n-Bu)}2] (20), respectively. Equilibria involving syn/anti isomers were unveiled for complexes [NiCl2{ImDiPP(C2OMe)}2] (5), 6−10 and 18−23. Reactions of 6 and 20 with an halide abstractor afforded the dicationic aquo complexes cis-[Ni{ImMes(C2OMe)}2(H2O)2][PF6]2 (27) and cis-[Ni{ImDiPP(n-Bu)}2(H2O)2][PF6]2 (28), in which a cis arrangement of the carbene ligands is evidenced, which contrasts with that in their precursors. These molecules represent rare examples of nickel aquo NHC complexes and of complexes with two cis monodentate NHC ligands. The new complexes reported in this work (15 crystal structures) displayed moderate activities as pre-catalysts for ethylene oligomerization and favored dimerization.

  • Self-assembly of strongly dipolar molecules on metal surfaces

    Donna A Kunkel, James Hooper, Scott Simpson, Daniel P Miller, Lucie Routaboul, Pierre Braunstein, Bernard Doudin, Sumit Beniwal, Peter Dowben, Ralph Skomski, Eva Zurek, Axel Enders
    The Journal of Chemical Physics, 2015, 142 (10), ⟨10.1063/1.4907943⟩ | Publiée le 14 mars 2015
    Article dans une revue

    The role of dipole-dipole interactions in the self-assembly of dipolar organic molecules on surfaces is investigated. As a model system, strongly dipolar model molecules, p-benzoquinonemonoimine zwitterions (ZI) of type C6H2(⋯ NHR)2(⋯ O)2 on crystalline coinage metal surfaces were investigated with scanning tunneling microscopy and first principles calculations. Depending on the substrate, the molecules assemble into small clusters, nano gratings, and stripes, as well as in two-dimensional islands. The alignment of the molecular dipoles in those assemblies only rarely assumes the lowest electrostatic energy configuration. Based on calculations of the electrostatic energy for various experimentally observed molecular arrangements and under consideration of computed dipole moments of adsorbed molecules, the electrostatic energy minimization is ruled out as the driving force in the self-assembly. The structures observed are mainly the result of a competition between chemical interactions and substrate effects. The substrate’s role in the self-assembly is to (i) reduce and realign the molecular dipole through charge donation and back donation involving both the molecular HOMO and LUMO, (ii) dictate the epitaxial orientation of the adsorbates, specifically so on Cu(111), and (iii) inhibit attractive forces between neighboring chains in the system ZI/Cu(111), which results in regularly spaced molecular gratings.

  • Qualitative near infrared spectroscopy, a new tool to recognize past vegetation signature in soil organic matter

    Damien Ertlen, Dominique Schwartz, Didier Brunet, Jean-Michel Trendel, Pierre Adam, Philippe Schaeffer
    Soil Biology and Biochemistry, 2015, 82, pp.127-134. ⟨10.1016/j.soilbio.2014.12.019⟩ | Publiée le 1 mars 2015
    Article dans une revue

    Previous studies (Ertlen et al., 2010) have shown that near infrared (NIR) spectroscopy of soil organic matter (SOM) can be used successfully to discriminate between SOM from topsoils under forest vs. grassland following establishment of a referential. We have now extended this referential of topsoils, and the derived model was used to characterize SOM within three soil profiles in order to test if vegetation changes throughout these profiles can be detected using NIR spectra from buried soil organic matter. Comparison between the results from this new proxy based on NIR measurements and other historical and pedoanthracological data documenting soil occupation shows no major contradiction in terms of vegetation cover and its evolution with time. These promising results will need further development in order to provide a new palaeoenvironmental tool that is far less time consuming and easier to handle than other methods like pedoanthracology or soil lipid analysis.

  • Water-induced local ordering of chitosan polymer chains in thin layer films

    Claire Madeleine-Perdrillat, Thomas Karbowiak, Jesus Raya, Régis Gougeon, Philippe Bodart, Frederic Debeaufort
    Carbohydrate Polymers, 2015, 118, pp.107-114. ⟨10.1016/j.carbpol.2014.11.001⟩ | Publiée le 1 mars 2015
    Article dans une revue

    Carbon-13 NMR (CP-MAS and FSLG 1H–13C HETCOR) have been applied to chitosan salt films synthesized in acetic acid and exposed to different relative humidity environments (32% or 75%) at 20 °C for 1 month. It gives insight in the relationship between structure and functional properties according to the hydration level of this biomaterial as a film. The acetate ions trapped in the chitosan act as structuring agents between chitosan chains for the low hydration state. But, increasing the moisture content induces spontaneous removal of acetic acid and a subsequent modification in the film structure, with an increase in local ordering. HETCOR experiments also showed a multiplicity of signals for most of the observed carbon atoms and in particular those implied in the glycosidic linkage, which reveals different water-induced conformational states. Changing the water content allows to modify the polymer structure and therefore to modulate the properties such as controlled release of active compounds trapped in chitosan-based coatings, e.g., for medicated dressing or active packaging.

  • Spin wave free spectrum and magnetic field gradient of nanopatterned planes of ferromagnetic cobalt nanoparticles: key properties for magnetic resonance based quantum computing

    Khalif Benzid, Dominique Muller, Philippe Turek, Jérôme Tribollet
    The European Physical Journal B: Condensed Matter and Complex Systems, 2015, 88 (3), ⟨10.1140/epjb/e2015-50768-3⟩ | Publiée le 1 mars 2015
    Article dans une revue

    We present a study by ferromagnetic resonance at microwave Q band of two sheets of cobalt nanoparticles obtained by annealing SiO2 layers implanted with cobalt ions. This exper- imental study is performed as a function of the applied magnetic field orientation, temperature, and dose of implanted cobalt ions. We demonstrate that each of those magnetic sheet of cobalt nanoparticles can be well modelled by a nearly two dimensional ferromagnetic sheet having a re- duced effective saturation magnetization, compared to a regular thin film of cobalt. The nanopar- ticles are found superparamagnetic above around 210 K and ferromagnetic below this blocking temperature. Magnetostatic calculations show that a strong magnetic field gradient of around 0.1 G/nm could be produced by a ferromagnetic nanostripe patterned in such magnetic sheet of cobalt nanoparticles. Such a strong magnetic field gradient combined with electron paramagnetic resonance may be relevant for implementing an intermediate scale quantum computer based on arrays of coupled electron spins, as previously reported (Eur. Phys. J. B (2014) 87, 183). How- ever, this new approach only works if no additional spin decoherence is introduced by the spin waves exitations of the ferromagnetic nanostructure. We thus suggest theoretically some possible magnetic anisotropy engineering of cobalt nanoparticles that could allow to suppress the electron spin qubit decoherence induced by the collective magnetic excitation of those nanoparticles.

  • Amphiphilic Polyoxometalates for the Controlled Synthesis of Hybrid Polystyrene Particles with Surface Reactivity

    Jennifer Lesage de la haye, Jean-Michel Guigner, Eric Marceau, Laurent Ruhlmann, Bernold Hasenknopf, Emmanuel Lacôte, Jutta Rieger
    Chemistry - A European Journal, 2015, 21 (7), pp.2948-53. ⟨10.1002/chem.201405708⟩ | Publiée le 1 février 2015
    Article dans une revue

    Amphiphilic organo-polyoxometalates (POMs) used in the radical emulsion polymerization of styrene allowed the preparation in aqueous medium of stable 50-100 nm polystyrene-POM composite latexes. Thanks to the presence of a trithiocarbonate group in the POM amphiphile, POMs could be covalently linked to the polymer particle surface. The chemical and catalytic integrity of the POMs was confirmed, and the POM-mediated surface photoactivity of the latexes was demonstrated by the spatially controlled nucleation of silver nanoparticles at the periphery of the composites.

  • Remote Control of Helical Chirality: Thermodynamic Resolution of a Racemic Mixture of CTV Units by Remote Stereogenic Centers

    Bastien Chatelet, Lionel Joucla, Daniele Padula, Lorenzo Di Bari, Guillaume Pilet, Vincent Robert, Véronique Dufaud, Jean-Pierre Dutasta, Alexandre Martinez
    Organic Letters, 2015, 17 (3), pp.500-503. ⟨10.1021/ol5035194⟩ | Publiée le 1 février 2015
    Article dans une revue

    Enantiopure hemicryptophanes designed from the cyclotriveratrylene (CTV) unit display remarkable properties in selective host–guest recognition or as supramolecular catalysts. The unprecedented control of the helical chirality of the CTV unit by remote stereogenic centers of a tren moiety is reported, providing an original access to this highly promising class of host molecules. Although the chiral centers and the CTV unit are separated by more than 10 Å, one single diastereomer is formed; the nature of the diastereoselective process is discussed and the procedure is exemplified using different enantiopure tren derivatives. This work also highlights the influence of the chirality of the CTV unit on the whole cage structure.

  • Study of the temperature-induced aggregation of polyoxometalate-poly(N,N-diethylacrylamide) hybrids in water

    Jennifer Lesage de La Haye, André Pontes da Costa, Gaelle Pembouong, Laurent Ruhlmann, Bernold Hasenknopf, Emmanuel Lacote, Jutta Rieger
    Polymer, 2015, 57, pp.173-182. ⟨10.1016/j.polymer.2014.12.013⟩ | Publiée le 28 janvier 2015
    Article dans une revue

    In this article, we study the temperature-induced phase transition of aqueous solutions of tailor-made Dawson polyoxometalate-poly(N,N-diethylacrylamide) hybrids (POM-PDEAAm) by means of differential scanning calorimetry, dynamic light scattering and cryo-TEM microscopy. Generally, the typical thermoresponsive aggregation of the PDEAAm in water was transferred to the hybrids. The organization of the compounds in solution below and above the transition temperature was studied, and precious insights in the aggregation mechanisms were obtained. The impact of the polymer chain-ends, the nature of the counterions of the negatively charged POM subunits and the weight fraction of the POM was elucidated, revealing a strong influence of the POM's counter-ions. Temperature and nature of the cations are thus two external factors that can be used to control the properties of the conjugates.

  • Electrochemistry suggests proton access from the exit site to the binuclear center in Paracoccus denitrificans cytochrome c oxidase pathway variants

    Thomas Meyer, Frederic Melin, Oliver-M. H. Richter, Bernd Ludwig, Aimo Kannt, Hanne Müller, Hartmut Michel, Petra Hellwig
    FEBS Letters, 2015, 589 (5), pp.565-568. ⟨10.1016/j.febslet.2015.01.014⟩ | Publiée le 27 janvier 2015
    Article dans une revue

    Two different pathways through which protons access cytochrome c oxidase operate during oxygen reduction from the mitochondrial matrix, or the bacterial cytoplasm. Here, we use electrocatalytic current measurements to follow oxygen reduction coupled to proton uptake in cytochrome c oxidase isolated from Paracoccus denitrificans. Wild type enzyme and site-specific variants with defects in both proton uptake pathways (K354M, D124N and K354M/D124N) were immobilized on gold nanoparticles, and oxygen reduction was probed electrochemically in the presence of varying concentrations of Zn(2+) ions, which are known to inhibit both the entry and the exit proton pathways in the enzyme. Our data suggest that under these conditions substrate protons gain access to the oxygen reduction site via the exit pathway.

  • Analyse, isolement et datation au 14C de lipids dans les sols. L’exemple des tétraéthers de diglycérol

    Blandine Courel, Philippe Schaeffer, Pierre Adam, Damien Ertlen, Dominique Schwartz, Stefano Bernasconi, I Hajdas
    Collection EDYTEM. Cahiers de géographie, 2015, 18, pp.57-68. ⟨10.3406/edyte.2015.1350⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    We report here the development of an analytical protocol for the specific isolation of isoprenoid and branched glycerol dialkyl glycerol tetraethers (i-and br-GDGTs, respectively) of microbial origin from soil samples for radiocarbon dating. This protocol comprises an extraction step followed by several chromatographic steps combining different techniques (silica gel column chromatography, high performance liquid chromatography and thin layer chromatography). Radiocarbon dating of these two series of compounds, isolated from a surface sample and a deep horizon sample (40-50 cm) from a soil profile, shows that i-and br-GDGTs in the deep sample have a comparable mean residence time (MRT), despite their different biological origin. These MRT are, however, lower than those measured for the soil organic matter (SOM) and for the different compartments of SOM. This result suggests that i-and br-GDGTs originate from microorganisms using the same carbon source, made of a combination of ancient and recent organic matter. It can also be envisaged that these compounds originate from both recent and ancient microbial populations. These preliminary results suggest that the use of (palaeo) proxies based on the distributions of GDGTs might be questionable in the case of soils or, at least, that caution is needed when interpreting soil GDGT signals in terms of (palaeo) environmental reconstructions.

  • Control of the cavity size of flexible covalent cages by silver coordination to the peripheral binding sites

    Lucas Kocher, Stephanie Durot, Valérie Heitz
    Chemical Communications, 2015, 51 (67), pp.13181-13184. ⟨10.1039/C5CC04972E⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    The synthesis of covalent cages consisting of two porphyrins connected by four flexible spacers each incorporating two 1,2,3- triazolyl ligands is reported. Binding of four silver(I) to the peripheral ligands induces conformational changes in solution and locks the porphyrins in a face-to-face disposition.

  • Membrane homeoviscous adaptation in the piezo-hyperthermophilic archaeon Thermococcus barophilus

    Anaïs Cario, Vincent Grossi, Philippe Schaeffer, Philippe M. Oger
    Frontiers in Microbiology, 2015, 6, pp.1152. ⟨10.3389/fmicb.2015.01152⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    The archaeon Thermococcus barophilus, one of the most extreme members of hyperthermophilic piezophiles known thus far, is able to grow at temperatures up to 103°C and pressures up to 80MPa. We analyzed the membrane lipids of T. barophilus by HPLC-MS as a function of pressure and temperature. In contrast to previous reports, we show that under optimal growth conditions (40 MPa, 85°C) the membrane spanning tetraether lipid GDGT-0 (sometimes called caldarcheol) is a major membrane lipid of T. barophilus together with archaeol. Increasing pressure and decreasing temperature lead to an increase of the proportion of archaeol. Reversely, a higher proportion of GDGT-0 is observed under low pressure and high temperature conditions. Noticeably, pressure and temperature fluctuations also impact the level of unsaturation of non-polar lipids with an irregular polyisoprenoid carbon skeleton (unsaturated lycopane derivatives), suggesting a structural role for these neutral lipids in the membrane of T. barophilus. Whether these apolar lipids insert in the membrane or not remains to be addressed. However, our results raise questions about the structure of the membrane in this archaeon and other Archaea harboring a mixture of di- and tetraether lipids.

  • High Resolution Solid State 2D NMR Analysis of Biomass and Biochar

    Yann Le Brech, Luc Delmotte, Jesus Raya, Nicolas Brosse, Roger Gadiou, Anthony Dufour
    Analytical Chemistry, 2015, 87 (2), pp.DOI: 10.1021/ac504237c. ⟨10.1021/ac504237c⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Solid state NMR methods are required to analyze biomass as a function of its chemical or biological treatment for biofuels, chemicals, or biochar production. The native polymers network in lignocellulosic biomass and other solid materials, such as coal, coke, or biochar, can hardly be analyzed by liquid state NMR due to their poor swelling ability without chemical modification. A 1H−13C two-dimensional heteronuclear correlation (HETCOR) experiment with frequency- switched Lee-Goldburg (FSLG) irradiation is performed on a high field spectrometer (750 MHz). This method leads to previously unattained resolution for biomass and biochar and offers a unique ability to reveal their chemical composition.The formation of aromatic moieties from carbohydrates and lignin thermal conversion is clearly distinguished. This method can be applied to all other carbonaceous materials.

  • A fluorescent heteroditopic hemicryptophane cage for the selective recognition of choline phosphate

    Dawei Zhang, Guohua Gao, Laure Guy, Vincent Robert, Jean-Pierre Dutasta, Alexandre Martinez
    Chemical Communications, 2015, ⟨10.1039/c4cc09428j⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    The first fluorescent hemicryptophane cage was synthesized and developed as an efficient and selective sensor for choline phosphate. The heteroditopic character of the host in the recognition process was evidenced. NMR experiments highlight a full encapsulation of the guest, inducing the chiralisation-like behavior of the achiral choline phosphate.

  • Unsymmetrical Chelation of N-Thioether-Functionalized Bis(diphenylphosphino)amine-Type Ligands and Substituent Effects on the Nuclearity of Iron(II) Complexes: Structures, Magnetism, and Bonding.

    Christophe Fliedel, Vitor Rosa, Andrés Falceto, Patrick Rosa, Santiago Alvarez, Pierre Braunstein
    Inorganic Chemistry, 2015, 54 (13), pp.6547-6559. ⟨10.1021/acs.inorgchem.5b00834⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Starting from the short-bite ligands N-thioether-functionalized bis(diphenylphosphino)amine-type (Ph2P)2N(CH2)3SMe (1) and (Ph2P)2N(p-C6H4)SMe (2), the Fe(II) complexes [FeCl2(1)]n (3), [FeCl2(2)]2 (4), [Fe(OAc)(1)2]PF6 (5), and [Fe(OAc)(2)2]PF6 (6) were synthesized and characterized by Fourier transform IR, mass spectrometry, elemental analysis, and also by X-ray diffraction for 3, 4, and 6. Complex 3 is a coordination polymer in which 1 acts as a P,P-pseudochelate and a (P,P),S-bridge, whereas 4 has a chlorido-bridged dinuclear structure in which 2 acts only as a P,P-pseudochelate. Since these complexes were obtained under strictly similar synthetic and crystallization conditions, these unexpected differences were ascribed to the different spacer between the nitrogen atom and the −SMe group. In both compounds, one Fe–P bond was found to be unusually long, and a theoretical analysis was performed to unravel the electronic or steric reasons for this difference. Density functional theory calculations were performed for a set of complexes of general formula [FeCl2(SR2){R21PN(R2)P′R23}] (R = H, Me; R1, R2, and R3 = H, Me, Ph), to understand the reasons for the significant deviation of the iron coordination sphere away from tetrahedral as well as from trigonal bipyramidal and the varying degree of unsymmetry of the two Fe–P bonds involving pseudochelating PN(R)P ligands. Electronic factors nicely explain the observed structures, and steric reasons were further ruled out by the structural analysis in the solid-state of the bis-chelated complex 6, which displays usual and equivalent Fe–P bond lengths. Magnetic susceptibility studies were performed to examine how the structural differences between 3 and 4 would affect the interactions between the iron centers, and it was concluded that 3 behaves as an isolated high-spin Fe(II) mononuclear complex, while significant intra- and intermolecular ferromagnetic interactions were evidenced for 4 at low temperatures. Complexes 3 and 4 were also tested in catalytic ethylene oligomerization but did not exhibit any significant activity under the studied conditions.

  • Dinuclear iridium and rhodium complexes with bridging arylimidazolide-N3,C2 ligands: synthetic, structural, reactivity, electrochemical and spectroscopic studies†

    Fan He, Laurent Ruhlmann, Jean-Paul Gisselbrecht, Sylvie Choua, Maylis Orio, Marcel Wesolek, Andreas A. Danopoulos, Pierre Braunstein
    Dalton Transactions, 2015, 44, pp.17030-17044. ⟨10.1039/c5dt02403j⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Deprotonation of 1-arylimidazoles (aryl = mesityl (Mes), 2,6-diisopropylphenyl (Dipp)), with n-butyl lithium afforded the corresponding derivatives (1-aryl-1H-imidazol-2-yl)lithium (1a, Ar = Mes; 1b, Ar = Dipp) in good yield. Reaction of 1a with 0.5 equiv. of [Ir(cod)(μ-Cl)]2 yielded two geometrical isomers of a doubly C2,N3-bridged dinuclear complex [Ir(cod){μ-C3H2N2(Mes)-κC2,κN3}]2 (3), 3H–H, a head-to-head (H–H) isomer of CS symmetry, and 3H–T, the thermodynamically preferred head-to-tail (H–T) isomer of C2 symmetry. The metallated carbon of the 4 electron donor anionic bridging ligands has some carbene character, reminiscent of the situation in N-metallated protic NHC complexes. Displacement of cod ligands from 3H–H and 3H–T afforded the tetracarbonyl complexes [Ir(CO)2{μ-C3H2N2(Mes)-κC2,κN3}]24H–H and 4H–T, respectively. The reaction with PMe3, which gave only one complex, [Ir(CO)(PMe3){μ-C3H2N2(Mes)-κC2,κN3}]2 (5), demonstrates that the isomerization of the central core Ir[μ-C3H2N2(Mes)-κC2,κN3]2Ir from H–H to H–T on going from 4H–H to 5 is readily triggered by phosphine substitution under mild conditions. Oxidative-addition of MeI to 5 afforded the formally metal–metal bonded d7–d7 complex [Ir2(CO)2(PMe3)2(Me)I{μ-C3H2N2(Mes)-κC2,κN3}2] (6). The blue [Ir(C2H4)2{μ-C3H2N2(Mes)-κC2,κN3}]2 (7) and purple [Rh(C2H4)2{μ-C3H2N2(Dipp)-κC2,κN3}]2 (9) tetraethylene complexes were also obtained with only a H–T arrangement of the bridging ligands. Although only modestly efficient in alkane dehydrogenation, complex 7 was found to be a more active pre-catalyst than 3H–T, 4H–T and 5, probably because of the favorable lability of the ethylene ligands. From cyclic voltammetry, exhaustive coulometry and spectroelectrochemistry studies, it was concluded that 3H–T undergoes a metal-based one electron oxidation to generate the mixed-valent Ir(I)/Ir(II) system. The energy of the intervalence band for the orange dirhodium complex [Rh(cod){μ-C3H2N2(Mes)-κC2,κN3}]2 (8) is shifted toward lower energies in comparison with 3H–T, reflecting the decrease of the energy with the intermetallic distance. It was concluded from the EPR study that the Ir and Rh centres contribute substantially to the experimental magnetic anisotropy and thus to the singly occupied molecular orbital (SOMO) in the mixed-valent Ir(I)/Ir(II) and Rh(I)/Rh(II) systems. The molecular structures of 3H–H, 3H–T, 8 and 9 have been determined by X-ray diffraction.

  • Water-Soluble Gold–N-Heterocyclic Carbene Complexes for the Catalytic Homogeneous Acid- and Silver-Free Hydration of Hydrophilic Alkynes.

    Houssein Ibrahim, Pierre de Frémont, Pierre Braunstein, Vincent Théry, Lionel Nauton, Federico Cisnetti, Arnaud Gautier
    Advanced Synthesis and Catalysis, 2015, 357, pp.3893-3900. ⟨10.1002/adsc.201500729⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Water-soluble gold(III/I) N-heterocylic carbene complexes behave as efficient catalysts for the hydration of terminal alkynes in neat water. The transformation proceeds in the absence of Brønsted acids or halide scavengers and is suitable for sensitive substrates. Kinetic profiles and DFT studies provide a clear picture of intermediates present during catalysis.

  • N-Heterocyclic carbene–phosphino-picolines as precursors of anionic ‘pincer’ ligands with dearomatised pyridine backbones; transmetallation from potassium to chromium

    Thomas Simler, Andreas Danopoulos, Pierre Braunstein
    Chemical Communications, 2015, 51 (53), pp.10699-10702. ⟨10.1039/C5CC02920A⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Deprotonation of hybrid NHC–phosphino-picoline ligands affords dearomatised pyridine backbones in potassium pincer salts that are suitable for transmetallation to chromium.

  • Bis-N-heterocyclic carbene ‘pincer’ ligands and iridium complexes with CF3 – Substituted phenylene backbone

    Martin Jagenbrein, Andreas Danopoulos, Pierre Braunstein
    Journal of Organometallic Chemistry, 2015, 775, pp.169-172. ⟨10.1016/j.jorganchem.2014.05.035⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    With the aim to favour formation of ‘pincer’-type IrIII complexes containing two NHC donor moieties, we have used a pro-ligand with a bis-CF3-substituted phenylene backbone in order to prevent unwanted backbone cyclometallation. The potential of this new ‘pincer’ pro-ligand, 1,1′-(4,6-bis(trifluoromethyl)-1,3-phenylene)bis(3-butyl-1H-imidazol-3-ium) iodide (3), is demonstrated by the synthesis and structural characterisation of the ‘pincer’ IrIII bis carbene benzenide complex (4).

  • IMes-acac: Hybrid combination of diaminocarbene and acetylacetonato sub-units into a new anionic ambidentate NHC ligand

    Vincent César, Valentina Mallardo, Adela Nano, Georges Dahm, Noël Lugan, Guy Lavigne, Stéphane Bellemin-Laponnaz
    Chemical Communications, 2015, 51 (25), pp.5271-5274. ⟨10.1039/c4cc08641d⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Themesoionic 5-acetylimidazolium-4-olate serves as precursor for an anionic, hybrid NHC, "IMes-acac'', consisting of fused diaminocarbene and acetylacetonato units, whose respective coordination abilities are evaluated by the formation of a series of representative copper(I) complexes illustrating the ambidentate character of the ligand.

  • Unusual Benzyl Migration Reactivity in NHC-Bearing Group 4 Metal Chelates: Synthesis, Characterization, and Mechanistic Investigations

    Charles Romain, David Specklin, Karinne Miqueu, Jean-Marc Sotiropoulos, C. Fliedel, S. Bellemin-Laponnaz, Samuel Dagorne
    Organometallics, 2015, 34 (20), pp.4854--4863. ⟨10.1021/om501143t⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    The reaction of 1 equiv of [M(CH2Ph)4] (M = Zr, Hf) and 1,3-bis(3,5-di-tert-butyl-2-hydroxyphenyl)imidazolinium chloride [tBu(OCO)H3, 1] cleanly yielded the corresponding M-NHC chloro benzyl derivatives [[tBu(OCO)]M(Cl)(CH2Ph)] (2Zr and 2Hf) along with 3 equiv of toluene. For both metal complexes, the effective formation of a (κ3-OCO) metal chelate and the coordination of a benzyl ligand onto the M(IV) metal center were established by NMR and elemental analysis. In contrast, under identical conditions, the reaction of Ti(CH2Ph)4 with the imidazolinium proligand 1 yielded the unexpected rearranged dimer product 3Ti, arising from the migration of the Ti-Bn group from the metal center to the Ccarbene atom. The molecular structure of 3Ti was established by analogy with the X-ray-determined Zr analogue 3Zr. Compound 3Zr quantitatively formed upon heating a benzene solution of 2Zr at 60 °C. In the solid state, compound 3Zr consists of two seven-coordinate mononuclear Zr fragments that are associated by two bridging μ2-chloride atoms, confirming the migration of the Zr-Bn moiety from the metal center to the Ccarbene atom. Carrying out the reaction of [M(CH2Ph)4] (M = Ti, Zr, Hf) with imidazolinium proligand 1 in THF led to the quantitative formation of the corresponding rearranged monomeric THF adduct [[tBu(OC(Bn)O)]M(Cl)(THF)] (4Ti-THF, 4Zr-THF, and 4Hf-THF), as established by X-ray crystallographic studies in the case of 4Ti-THF. Such a THF-promoted benzyl migration was also observed with the dibenzyl Zr and Hf complexes [[tBu(OCO)]M(CH2Ph)2] (5Zr and 5Hf), leading to the formation of the corresponding THF-rearranged products [[tBu(OC(Bn)O)]M(CH2Ph)(THF)] (6Zr-THF and 6Hf-THF). The addition of 1 equiv of methylmagnesium bromide (CH3MgBr) or phenylmagnesium bromide (PhMgBr) to 1 equiv of the zirconium dichloro NHC complex [[tBu(OCO)]Zr(Cl)2(THF)] (8) in THF yielded the rearranged products [[tBu(OC(Me)O)]M(Cl)(THF)] (9Me) and [[tBu(OC(Ph)O)]M(Cl)(THF)] (9Ph), respectively, as deduced from NMR data. Kinetic studies were carried out on the THF-promoted rearrangement reaction of the benzyl chloro Hf derivative 2Hf in the presence of THF to produce 4Hf-THF. These data are consistent with the reaction rate law being first order both in THF and in the THF adduct 2Hf-THF. DFT calculations on the Ti, Zr, and Hf systems support a benzyl migration reaction occurring at a transient heptacoordinated bis-THF adduct species of the type [[tBu(OCO)]M(Cl)(Bn)(THF)2], which may readily form upon THF coordination to 2Hf-THF. © 2015 American Chemical Society.

  • A fast and simple method to eliminate Cpn60 from functional recombinant proteins produced by E. coli Arctic Express.

    Lorène Belval, Arnaud Marquette, Pedro-Felipe Mestre Artigues, Marie-Christine Piron, Gerard Demangeat, Didier Merdinoglu, Jean-François Chich
    Protein Expression and Purification, 2015, 109, pp.29-34. ⟨10.1016/j.pep.2015.01.009⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    A frequent problem of recombinant protein production is their insolubility. To address this issue, engineered Escherichiacoli strains like Arctic Express that produce an exogenous chaperone facilitating protein folding, have been designed. A drawback is the frequent contamination of the protein by chaperones. A simple method, using urea at a sub-denaturing concentration, allows unbinding of Cpn60 from expressed protein. This method was successfully used to purify 2 proteins, an enzyme and a viral protein. The enzyme was fully active. The nature of interaction forces between enzyme and Cpn60 was investigated. The method is likely applicable to purify other proteins.

  • Copolymeric films obtained by electropolymerization of porphyrins and dipyridyl-spacers including Dawson-type polyoxometalates

    Zhaohui Huo, Iban Azcarate, Rana Farha, Michel Goldmann, Hualong Xu, Bernold Hasenknopf, Emmanuel Lacote, Laurent Ruhlmann
    Journal of Solid State Electrochemistry, 2015, 19 (9), pp.2611-2621. ⟨10.1007/s10008-015-2828-5⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    This paper reports the formation of hybrid polyoxometalate-porphyrin copolymeric films obtained by the electro-oxidation of zinc-β-octaethylporphyrin (ZnOEP) in the presence of a functionalized Dawson-type polyoxometalate bearing two pyridyl groups (POMdbme3,3, Py-POM-Py) which will be compared to the copolymer obtained from ZnOEP and a dipyridyl compound without POM (ibme3,3). The resulting film has been characterized by UV-visible absorption spectroscopy, X-ray photoelectron spectroscopy, and atomic force microscopy. Electrochemical quartz crystal microbalance was employed to investigate the poly-porphyrin-POMs deposition mass.

  • Generation of Photocurrent by Visible-Light Irradiation of Conjugated Dawson Polyoxophosphovanadotungstate-Porphyrin Copolymers

    Iban Azcarate, Zhaohui Huo, Rana Farha, Michel Goldmann, Hualong Xu, Bernold Hasenknopf, Emmanuel Lacote, Laurent Ruhlmann
    Chemistry - A European Journal, 2015, 21 (22), pp.8271-8280. ⟨10.1002/chem.201406178⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Four hybrid polyoxometalate-porphyrin copolymer films were obtained by the electrooxidation of zinc octaethylporphyrin in the presence of four different Dawson-type polyoxometalates bearing two pyridyl groups (POM(py)(2)) with various spacers. The POM monomers were designed around 1,3,5-trisubstituted benzene rings. Two of the substituents of the benzene ring are linked to the pyridyl groups, and the third is connected to the POM subunit. The four monomers vary in the relative positions of the nitrogen atoms of the pyridine rings or in the distance from the carbonyl group. The monomers were fully characterized by H-1, P-31, and (CNMR)-C-13 spectroscopy, electrospray mass spectrometry, IR and UV/Vis spectroscopy, and electrochemistry. The copolymers were characterized by UV/Vis spectroscopy, X-ray photoelectron spectroscopy, electrochemistry, and AFM. Their photovoltaic performance under visible light irradiation was investigated by photocurrent transient measurements under visible illumination.

  • Photochemistry and photophysics of transition metal complexes: Quantum chemistry

    Chantal Daniel
    Coordination Chemistry Reviews, 2015, 282-283, pp.19-32. ⟨10.1016/j.ccr.2014.05.023⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Methodological aspects are highlighted in connection to three important theoretical issues in the field of transition metal complexes photochemistry and photophysics: (i) accuracy of electronic absorption spectra calculation and their interpretation; (ii) photo-induced isomerization and ultra-fast intersystem crossing processes in rhenium (I) α-diimine complexes; (iii) environment effects on absorption spectroscopy and photophysics of ruthenium (II) polypyridyl complexes. The results of recent applications provide an illustration of the role of spin–orbit coupling and environment effects in the photochemistry and photophysics of transition metal complexes and point to the limits of the methods for specific problems, such as accuracy, long-range charge-transfer excited states and biological environment modeling.

  • Unprecedented directed lateral lithiations of tertiary carbons on NHC platforms

    Andreas A. Danopoulos, Pierre Braunstein, Elixabete Rezabal, Gilles Frison
    Chemical Communications, 2015, 51, pp.3049-3052. ⟨10.1039/C4CC08434A⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Unexpected and unprecedented directed remote lateral lithiation at one CH(CH3)2 of the 3-(2,6-di-isopropylphenyl) wingtip took place upon the reaction of functionalised N-heterocyclic carbene-type molecules with excess of LiCH2SiMe3, leading to dilithiated dianionic 4-amido-N-heterocyclic carbenes. DFT calculations show that the nature of the isolated species are under thermodynamic control.

  • Solid-State NMR/Dynamic Nuclear Polarization of Polypeptides in Planar Supported Lipid Bilayers

    Evgeniy S. Salnikov, Hiba Sarrouj, Christian Reiter, Christopher Aisenbrey, Armin Purea, Fabien Aussenac, Olivier Ouari, Paul Tordo, Illya Fedotenko, Frank Engelke, Burkhard Bechinger
    Journal of Physical Chemistry B, 2015, 119 (46), pp.14574 - 14583. ⟨10.1021/acs.jpcb.5b07341⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Dynamic nuclear polarization has been developed to overcome the limitations of the inherently low signal intensity of NMR spectroscopy. This technique promises to be particularly useful for solid-state NMR spectroscopy where the signals are broadened over a larger frequency range and most investigations rely on recording low gamma nuclei. To extend the range of possible investigations, a triple-resonance flat-coil solid-state NMR probe is presented with microwave irradiation capacities allowing the investigation of static samples at temperatures of 100 K, including supported lipid bilayers. The probe performance allows for two-dimensional separated local field experiments with high-power Lee–Goldberg decoupling and cross-polarization under simultaneous irradiation from a gyrotron microwave generator. Efficient cooling of the sample turned out to be essential for best enhancements and line shape and necessitated the development of a dedicated cooling chamber. Furthermore, a new membrane-anchored biradical is presented, and the geometry of supported membranes was optimized not only for good membrane alignment, handling, stability, and filling factor of the coil but also for heat and microwave dissipation. Enhancement factors of 17-fold were obtained, and a two-dimensional PISEMA spectrum of a transmembrane helical peptide was obtained in less than 2 h

  • N-Alkylfluorenyl-substituted N-heterocyclic carbenes as bimodal pincers

    Matthieu Teci, Eric Brenner, Dominique Matt, Christophe Gourlaouen, Loic Toupet
    Dalton Transactions, 2015, 44 (19), pp.9260--9268. ⟨10.1039/C5DT00980D⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Two N-heterocyclic carbene precursors having their nitrogen atoms substituted by the expanded 9-ethyl-9-fluorenyl group, namely imidazolinium chloride 6 and imidazolium chloride 7, have been synthesized in high yields from fluorenone (1). The key intermediate of their syntheses is the new primary amine 9-ethyl-9-fluorenylamine (3), which was prepared in 75% yield. Both salts were readily converted into the corresponding PEPPSI-type palladium complexes, 8 and 9 (PEPPSI: pyridine-enhanced precatalyst preparation stabilisation and initiation). Despite rotational freedom of the ethylfluorenyl moieties about the N–C(fluorenyl) bond in their cationic precursors, the carbene ligands of the Pd(II)-complexes 8 and 9 both behave as bimodal pincers in solution and in the solid state, the resulting confinement being essentially due to (weak) attractive anagostic interactions between the CH2(fluorenyl) groups and the metal centre. Unlike in 8 and 9, there was no indication for similar anagostic interactions in the imidazolylidene chlorosilver complex 11, which could be obtained from 7. In the solid state, however, 11 adopts a remarkable “open sandwich” structure, with the two alkylfluorenilidene planes η2-bonded to the silver, this constituting a further bimodal pincer-type bonding mode of this ligand class. Complexes 8 and 9 were assessed in Suzuki–Miyaura cross-coupling reactions. The imidazolylidene complex 9 displayed high activity towards unencumbered aryl chlorides. Its activity is comparable to that of the previously reported, highly efficient benzimidazolylidene analogue 10

  • Cyclodextrin and phosphorus( iii ): a versatile combination for coordination chemistry and catalysis

    Matthieu Jouffroy, Dominique Armspach, Dominique Matt
    Dalton Transactions, 2015, 44 (29), pp.12942-12969. ⟨10.1039/c5dt00667h⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    With the advent of efficient methods for functionalising cyclodextrins, the synthesis of a variety of cyclodextrin-based P(III) ligands has been made possible. Capable of acting both as first and second coordination sphere ligands towards various transition metals, these compounds have found many applications in homogeneous catalysis. This perspective article describes the different approaches that have been used to covalently associate the ubiquitous P(III) donor atom with a cyclodextrin cavity. In addition, special emphasis is placed on the influence the cyclodextrin receptor has on the coordination and catalytic properties of these cavity-shaped ligands.

  • Les archives pédologiques : des concepts de base à la gestion des écosystèmes. Nouvelles approches en spectroscopie proche infrarouge (SPIR) et sur les marqueurs moléculaires lipidiques. Apports du programme GESSOL-APOGEE

    Dominique Schwartz, Damien Ertlen, Lucie Froehlicher, Barbora Vyslousilova, Claire Bastien, Blandine Courel, Philippe Schaeffer, Jean-Michel Trendel, Céline Liaud, Estelle Motsch, Pierre Adam, Ludek Sefrna, Irka Hajdas, Merle Gierga, Stefano Bernasconi
    Collection EDYTEM, 2015, 18, pp.19-32. ⟨10.3406/edyte.2015.1347⟩ | Publiée le 1 janvier 2015
    Article dans une revue

  • A route for the total synthesis of enantiomerically enriched jasmonates 12-COOH-JA and 12-COOH-JA-Ile

    Clément F. Heinrich, Emilie Widemann, Jérémie Sanz, Raphaël Lugan, Thierry Heitz, Franck Pinot, Michel Miesch, Laurence Miesch
    Plant Signaling and Behavior, 2015, 2015 (5), pp.1130-1136. ⟨10.1002/ejoc.201403347⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Abstract Enantiomerically enriched oxidized conjugated or non‐conjugated jasmonate derivatives were obtained through 3‐alkynoates. Stereoselective reduction of the triple bond afforded exclusively the Z isomer. Protection of the amide function led to the non‐conjugated derivatives, whereas the free amides provided the oxidized isoleucine derivatives of jasmonate.

  • “Hummingbird” Behaviour of N-Heterocyclic Carbenes Stabilises Out-of-Plane Bonding of AuCl and CuCl Units

    Matthieu Teci, Eric Brenner, Dominique Matt, Christophe Gourlaouen, Loic Toupet
    Chemistry - A European Journal, 2015, 21 (31), pp.10997--11000. ⟨10.1002/chem.201500840⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    An N-heterocyclic carbene substituted by two expanded 9-ethyl-9-fluorenyl groups was shown to bind an AuCl unit in an unusual manner, namely with the AuX rod sitting out of the plane defined by the heterocyclic carbene unit. As shown by X-ray studies and DFT calculations, the observed large pitch angle (21°) arises from an easy displacement of the gold(I) atom away from the carbene lone-pair axis, combined with the stabilisation provided by weak CH⋅⋅⋅Au interactions involving aliphatic and aromatic H atoms of the NHC wingtips. Weak, intermolecular Cl⋅⋅⋅H bonds are likely to cooperate with the H⋅⋅⋅Au interactions to stabilise the out-of-plane conformation. A general belief until now was that tilt angles in NHC complexes arise mainly from steric effects within the first coordination sphere

  • Alkylfluorenyl substituted N-heterocyclic carbenes in copper(I) catalysed hydrosilylation of aldehydes and ketones

    Matthieu Teci, Nicolas Lentz, Eric Brenner, Dominique Matt, Loic Toupet
    Dalton Transactions, 2015, 44 (31), pp.13991--13998. ⟨10.1039/C5DT01888A⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Copper(I) complexes featuring N-heterocyclic carbenes (NHCs) in which the nitrogen atoms are substituted by a 9-ethyl-9-fluorenyl group (EF) have been synthesised and tested in the hydrosylilation of functionalized and/or sterically demanding ketones and aldehydes. These reactions, carried out with triethylsilane as hydride source, were best achieved with the imidazolylidene copper complex 2d in which the EF substituents can freely rotate about the corresponding N–CEF bonds. The remarkable stability of the active species, which surpasses that of previously reported Cu–NHC catalysts is likely to rely on the ability of the NHC side arms to protect the copper centre during the catalytic cycle by forming sandwich-like intermediates, but also on its steric flexibility facilitating approach of encumbered substrates. TONs up to 1000 were reached

  • A facile one-step synthesis of star-shaped alkynyl carbonates from CO2

    Rebecca Shu Hui Khoo, Agnes Mei Xian Lee, Pierre Braunstein, T. S. Andy Hor, He-Kuan Luo
    Chemical Communications, 2015, 51 (56), pp.11225-11228. ⟨10.1039/C5CC04088D⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    We report a facile, one-step green synthesis of two new star-shaped compounds containing three or six pendant carbonate groups with terminal alkynes. The reaction occurs under 1 atm CO2 and proceeds optimally at room temperature. These multialkynyl-carbonate-functionalized benzenes represent readily accessible precursors to more complex dendritic materials.

  • Synthesis, structures, and single-molecule magnet behaviour of high-nuclearity nickel(II) dicubane-type complexes with pyridyl-alcohol-ligands

    Sophie Hameury, Laure Kayser, Roberto Pattacini, Patrick Rosa, Anne-Laure Barra, Pierre Braunstein
    ChemPlusChem, 2015, 80 (8), pp.1312-1320. ⟨10.1002/cplu.201500184⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    The condensation reaction between two chemically different tetranuclear cubane-like clusters [Ni(μ3-Cl)(Cl)(HL)]4 (1; HL=2-methyl-1-(pyridin-2-yl)propan-2-ol) and [Ni(μ3-OH)(Cl)(HL)]4 (2) provides new access to higher nuclearity complexes, as shown with the synthesis of the octanuclear complex [Ni8(μ3-Cl)3(μ3-OH)5(μ-Cl)2Cl6(HL)7] (3). In one instance, we also isolated the heptanuclear complex [Ni7(μ3-Cl)2(μ3-OH)6Cl4(H2O)2(HL)6]Cl2 (4). Magnetic properties measured by superconducting quantum interference device (SQUID) susceptometry evidenced S=8 and S=5 ground states for complexes 3 and 4, respectively. In particular, alternating current (ac) susceptometry evidenced slow relaxation of the magnetisation for complex 3, and suggests a similar behaviour at sub-kelvin temperatures for complex 4.

  • CYP94-mediated jasmonoyl-isoleucine hormone oxidation shapes jasmonate profiles and attenuates defence responses to Botrytis cinerea infection

    Yann Aubert, Emilie Widemann, Laurence Miesch, Franck Pinot, Thierry Heitz
    Journal of Experimental Botany, 2015, 66 (13), pp.3879-3892. ⟨10.1093/jxb/erv190⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Induced resistance to the necrotrophic pathogen Botrytis cinerea depends on jasmonate metabolism and signalling in Arabidopsis. We have presented here extensive jasmonate profiling in this pathosystem and investigated the impact of the recently reported jasmonoyl-isoleucine (JA-Ile) catabolic pathway mediated by cytochrome P450 (CYP94) enzymes. Using a series of mutant and overexpressing (OE) plant lines, we showed that CYP94B3 and CYP94C1 are integral components of the fungus-induced jasmonate metabolic pathway and control the abundance of oxidized conjugated but also some unconjugated derivatives, such as sulfated 12-HSO4-JA. Despite causing JA-Ile overaccumulation due to impaired oxidation, CYP94 deficiency had negligible impacts on resistance, associated with enhanced JAZ repressor transcript levels. In contrast, plants overexpressing (OE) CYP94B3 or CYP94C1 were enriched in 12-OH-JA-Ile or 12-COOH-JA-Ile respectively. This shift towards oxidized JA-Ile derivatives was concomitant with strongly impaired defence gene induction and reduced disease resistance. CYP94B3-OE, but unexpectedly not CYP94C1-OE, plants displayed reduced JA-Ile levels compared with the wild type, suggesting that increased susceptibility in CYP94C1-OE plants may result from changes in the hormone oxidation ratio rather than absolute changes in JA-Ile levels. Consistently, while feeding JA-Ile to seedlings triggered strong induction of JA pathway genes, induction was largely reduced or abolished after feeding with the CYP94 products 12-OH-JA-Ile and 12-COOH-JA-Ile, respectively. This trend paralleled in vitro pull-down assays where 12-COOH-JA-Ile was unable to promote COI1-JAZ9 co-receptor assembly. Our results highlight the dual function of CYP94B3/C1 in antimicrobial defence: by controlling hormone oxidation status for signal attenuation, these enzymes also define JA-Ile as a metabolic hub directing jasmonate profile complexity.

  • Directionality of Double-Bond Photoisomerization Dynamics Induced by a Single Stereogenic Center

    Gabriel Marchand, Julien Eng, Igor Schapiro, Alessio Valentini, Luis Frutos, Elisa Pieri, Massimo Olivucci, Jérémie Léonard, Etienne Gindensperger
    Journal of Physical Chemistry Letters, 2015, 6 (4), pp.599-604. ⟨10.1021/jz502644h⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    In light-driven single-molecule rotary motors, the photoisomerization of a double bond converts light energy into the rotation of a moiety (the rotor) with respect to another (the stator). However, at the level of a molecular population, an effective rotary motion can only be achieved if a large majority of the rotors rotate in the same, specific direction. Here we present a quantitative investigation of the directionality (clockwise vs counterclockwise) induced by a single stereogenic center placed in allylic position with respect to the reactive double bond of a model of the biomimetic indanylidene-pyrrolinium framework. By computing ensembles of non-adiabatic trajectories at 300 K, we predict that the photoisomerization is >70% unidirectional for the Z -> E and E -> Z conversions. Most importantly, we show that such directionality, resulting from the asymmetry of the excited state force field, can still be observed in the presence of a small (ca. 2 degrees) pretwist or helicity of the reactive double bond. This questions the validity of the conjecture that a significant double-bond pretwist (e.g., >10 degrees)w in the ground state equilibrium structure of synthetic or natural rotary motors would be required for unidirectional motion.

  • A Cell-Penetrating Foldamer with a Bioreducible Linkage for Intracellular Delivery of DNA

    Celine Douat, Christopher Aisenbrey, Stephanie Antunes, Marion Decossas, Olivier Lambert, Burkhard Bechinger, Antoine Kichler, Gilles Guichard
    Angewandte Chemie International Edition, 2015, 54 (38), pp.11133-11137. ⟨10.1002/anie.201504884⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Despite significant advances in foldamer chemistry, tailored delivery systems based on foldamer architectures, which provide a high level of control over secondary structure, are curiously rare among non-viral technologies for transporting nucleic acids into cells. A potent pH-responsive, bioreducible cell-penetrating foldamer (CPF) was developed through covalent dimerization of a short (8-mer) amphipathic oligourea sequence bearing histidine-type units. This CPF exhibits a high capacity to assemble with pDNA and mediates efficient delivery of nucleic acids into the cell. Furthermore, it does not adversely affect cellular viability and was shown to compare favorably with a cognate peptide transfection agent based on His-rich sequences.

  • Electrocatalytic Properties of Metal Phthalocyanine Tetrasulfonate Intercalated in Metal Layered Simple Hydroxides (Metal: Co, Cu, and Zn).

    Séraphin Eyele-Mezui, Pierre Vialat, Christophe Higy, Riadh Bourzami, Cédric Leuvrey, Nathalie Parizel, Philippe Turek, Pierre Rabu, Guillaume Rogez, Christine Mousty
    Journal of Physical Chemistry C, 2015, 119, pp.13335-13342. ⟨10.1021/acs.jpcc.5b02985⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    A series of hybrid metal (Zn, Cu, and Co) layered simple hydroxides (LSH) functionalized by surfactants, namely, dodecylsulfonate (DS0) or dodecylsulfate (DS–) and by tetrasulfonato metal (Cu, Co)-phthalocyanines, was synthesized by anionic exchange reactions and characterized by ancillary techniques. The electrochemical properties of these compounds were investigated by cyclic voltammetry in phosphate buffer solutions over a wide potential range including that suitable for oxygen reduction. The electroactivity of intralayer metal cations (Cu and Co) was evidenced as a function of the phosphate buffer pH. The redox properties of Co- and Cu-PcTS0 grafted in LSH (Zn, Co, and Cu) were also investigated in neutral pH solution, under argon, air, or O2 atmospheres. Interestingly, these hybrid compounds display an electrocatalytic behavior toward the reduction of oxygen. In particular with CoPcTS0-LSH, a sharp electrocatalytic reduction wave is observed at −0.40 V/Ag-AgCl with an intensity that depends on the oxygen concentration. The formation of a CoPc-O2 grafted species in the presence of oxygen was confirmed by electron paramagnetic resonance spectroscopy.

  • CYP76C1 (Cytochrome P450)-mediated linalool metabolism and the formation of volatile and soluble linalool oxides in Arabidopsis flowers: a strategy for defense against floral antagonists

    Benoît Boachon, Robert Junker, Laurence Miesch, Jean-Etienne Bassard, René Höfer, Robin Caillieaudeaux, Dana Seidel, Agnès Lesot, Clément Heinrich, Jean-François Ginglinger, Lionel Allouche, Bruno Vincent, Dinar S.C. Wahyuni, Christian Paetz, Franziska Beran, Michel Miesch, Bernd Schneider, Kirsten Leiss, Danièle Werck-Reichhart
    The Plant cell, 2015, 27 (10), pp.2972-2990. ⟨10.1105/tpc.15.00399⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    The acyclic monoterpene alcohol linalool is one of the most frequently encountered volatile compounds in floral scents. Various linalool oxides are usually emitted along with linalool, some of which are cyclic, such as the furanoid lilac compounds. Recent work has revealed the coexistence of two flower-expressed linalool synthases that produce the (S)- or (R)-linalool enantiomers and the involvement of two P450 enzymes in the linalool oxidation in the flowers of Arabidopsis thaliana. Partially redundant enzymes may also contribute to floral linalool metabolism. Here, we provide evidence that CYP76C1 is a multifunctional enzyme that catalyzes a cascade of oxidation reactions and is the major linalool metabolizing oxygenase in Arabidopsis flowers. Based on the activity of the recombinant enzyme and mutant analyses, we demonstrate its prominent role in the formation of most of the linalool oxides identified in vivo, both as volatiles and soluble conjugated compounds, including 8-hydroxy, 8-oxo, and 8-COOH-linalool, as well as lilac aldehydes and alcohols. Analysis of insect behavior on CYP76C1 mutants and in response to linalool and its oxygenated derivatives demonstrates that CYP76C1-dependent modulation of linalool emission and production of linalool oxides contribute to reduced floral attraction and favor protection against visitors and pests.

  • Alternative aluminum-based cocatalysts for the iron-catalyzed oligomerization of ethylene.

    Adrien Boudier, Pierre-Alain Breuil, Lionel Magna, Hélène Olivier-Bourbigou, Pierre Braunstein
    Dalton Transactions, 2015, 44 (29), pp.12995-12998. ⟨10.1039/c5dt01367d⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Multinuclear aluminum cocatalysts have been obtained by the reaction of various phenols, alcohols or diois with trimethylaluminum and were used in situ or as isolated, welldefined species, for the activation of an iron(ll) or an iron(lll) precatalyst for the oligomerization of ethylene. The best cocatalyst candidate involves 2,2'-biphenol (10) in a 10/AIMe3 ratio of 2/3.

  • Imidazolium Dicarboxylate Based Metal-Organic Frameworks Obtained by Solvo-Ionothermal Reaction

    Pierre Farger, Régis Guillot, Fabrice Leroux, Nathalie Parizel, Mathieu Gallart, Pierre Gilliot, Guillaume Rogez, Emilie Delahaye, Pierre Rabu
    European Journal of Inorganic Chemistry, 2015, pp.5342-5350. ⟨10.1002/ejic.201500825⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Solvo-ionothermal reactions were run between cobalt acetate or zinc acetate and 1,3-bis(carboxymethyl)imidazolium chloride ([(MimCO2H)2][Cl]). These reactions led to two isostructural metal–organic frameworks (MOFs). These two compounds, [(MimCO2)2]2Co and [(MimCO2)2]2Zn, were obtained as single crystals, and their structures were determined by single-crystal X-ray diffraction. These two analogs have a 2D framework consisting of the stacking of layers formed by interconnection of rings containing ligands and metal ions. The structural and thermal properties were analyzed by means of ancillary techniques encompassing FTIR, UV/Vis, NMR spectroscopy, and TGA/TDA measurements. In addition, magnetic and EPR spectroscopic measurements on [(MimCO2)2]2Co showed that the Co2+ ions are in a high-spin configuration with a large magnetic anisotropy relying on a rather unusual distorted tetrahedral coordination. The investigation of the optical properties revealed the photoluminescence of [(MimCO2)2]2Zn.

  • Silver(I) and copper(I) complexes with bis-NHC ligands : dinuclear complexes, cubanes and coordination polymers.

    Valentine Charra, Pierre de Frémont, Pierre-Alain Breuil, Hélène Olivier-Bourbigou, Pierre Braunstein
    Journal of Organometallic Chemistry, 2015, 795, pp.25-33. ⟨10.1016/j.jorganchem.2015.01.025⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Silver(I) and copper(I) complexes containing neutral bis(N-heterocyclic carbene) (NHC) ligands and coordinated or non-coordinated chloride, bromide, iodide, or tetrafluoroborate anions, were synthesised. The nature of the anions impacts deeply the structural features of the complexes in the solid-state and neutral cubane-, neutral coordination polymer-, or dicationic bridged-type architectures have been characterised. The structures of (1,3-bis(3′-butylimidazol-2′-ylidene)benzene)disilver(I) dichloride (2a), bis(μ-1,3-bis(3′-butylimidazol-2′-ylidene)benzene-κ-C)tetra-μ3-bromotetrasilver(I) (2b), bis(1,3-bis(3′-butylimidazol-2′-ylidene)benzene)disilver(I) tetrafluoroborate (2d) in 2d·CH2Cl2, (1,3-bis(3′-butylimidazol-2′-ylidene)benzene)dicopper(I) dichloride (3a) and (1,3-bis(3′-butylimidazol-2′-ylidene)benzene)dicopper(I) dibromide (3b) were established by X-ray diffraction.

  • Structural and electronic effects in bimetallic PdPt nanoparticles on TiO2 for improved photocatalytic oxidation of CO in the presence of humidity

    Olivier Rosseler, Corinne Ulhaq-Bouillet, Antoine Bonnefont, Sergey Pronkin, Elena Savinova, Alain Louvet, Valérie Keller, Nicolas Keller
    Applied Catalysis B: Environmental, 2015, 166, pp.381-392. ⟨10.1016/j.apcatb.2014.12.001⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Bimetallic PdxPt1-x/TiO2-P25 photocatalysts have been proven to maintain high activity for CO photocatalytic oxidation even under 50% relative humidity for 0.3 <x <0.5 molar compositions, whereas humidity traces are highly detrimental when the reaction was performed over TiO2 supported monometallic particles. The catalysts were characterized by XPS, TEM, HAADF-STEM, TPR, CO-TPD and FTIR-CO adsorption characterization. The results suggested a random distribution of Pd and Pt atoms within the bimetallic nanoparticles, and in particular at their surface. It was proposed that the synergy observed in bimetallic PdxPt1-x/TiO2 may be explained by their modified electronic structure, playing a key role in overcoming the negative effects of humidity on the photocatalytic CO conversion. The behavior of PdxPt1-x/TiO2 under humid air was assumed to result from a preferential oxygen and water adsorption on surface Pt sites, leaving Pd sites free for CO adsorption, Pd being more resistant to oxidation than Pt in Pt-rich PtPd particles. (C) 2014 Elsevier B.V. All rights reserved.

  • Unexpected synthesis of an Au2In2 tetrametallatricyclic complex from α-aminophosphines and formation of Au–In–P and Ag–In–P nanomaterials

    Hsiao Wei Chen, T. S. Andy Hor, Roberto Pattacini, Pierre Braunstein
    Dalton Transactions, 2015, 44 (37), pp.16242-16246. ⟨10.1039/C5DT02457A⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Four Au–(μ-phosphinite)–In units assemble to form an unprecedented Au2In2 12-membered metallacycle which intersects at the In centres an 8-membered ring containing two In–μ–phosphinate linkages, resulting in a tricyclic structure. Thermal treatment of this complex and of its Ag(I) analog affords Au–In–P and Ag–In–P nanomaterials, respectively.

  • Ruthenium Carbon-Rich Complexes as Redox Switchable Metal Coupling Units

    Emmanuel Di Piazza, Areej Merhi, Lucie Norel, Stéphane Rigaut, Sylvie Choua, Philippe Turek
    Inorganic Chemistry, 2015, 54 (13), pp.6347-6355. ⟨10.1021/acs.inorgchem.5b00667⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    With the help of EPR spectroscopy, we show that the diamagnetic [Ru(dppe)2(-C≡C-R)2] system sets up a magnetic coupling between two organic radicals R, i.e., two nitronyl nitroxide or two verdazyl units, which is stronger than that of related platinum organometallic systems. Surprisingly, further oxidation of the ruthenium redox-active metal coupling unit (MCU), which introduces an additional spin unit on the carbon-rich part, leads to the switching off of this interaction. On the contrary, in simpler complexes bearing only one of the organic radical ligands [C6H5-C≡C-Ru(dppe)2-C≡C-R], one-electron oxidation of the transition metal unit generates an interaction between the two spin carriers of comparable magnitude to that observed in the above corresponding neutral systems.

  • Synthesis and characterization of Lindqvist-type polyoxometalate–porphyrin copolymers

    Zhaohui Huo, Zang Dejin, Yang Shu, Rana Farha, Michel Goldmann, Bernold Hasenknopf, Hualong Xu, Laurent Ruhlmann
    Electrochimica Acta, 2015, 179, pp.326-335. ⟨10.1016/j.electacta.2015.03.178⟩ | Publiée le 1 janvier 2015
    Article dans une revue

    Hybrid polyoxometalate-porphyrin copolymeric films were obtained by the electrooxidation of 5, 15-ditolyl porphyrin (H2T2P) and zinc-β-octaethylporphyrin (ZnOEP) in the presence of the Lindqvist-type polyoxovanadates TBA2[V6O13{(OCH2)3CNHCO(4-C5H4N)}2] (Py-POM-Py). The resulting films have been characterized by UV–visible absorption spectroscopy, X-ray photoelectron spectroscopy, atomic force microscopy and electrochemistry. Electrochemical quartz crystal microbalance was employed to investigate the copolymer mass.

  • The SMART model: Soft Membranes Adapt and Respond, also Transiently, in the presence of antimicrobial peptides

    Burkhard Bechinger
    Journal of Peptide Science, 2014, 21 (5), pp.346-355. ⟨10.1002/psc.2729⟩ | Publiée le 18 décembre 2014
    Article dans une revue

    Biophysical and structural studies of peptide–lipid interactions, peptide topology and dynamics have changed our view on how antimicrobial peptides insert and interact with membranes. Clearly, both the peptides and the lipids are highly dynamic, change and mutually adapt their conformation, membrane penetration and detailed morphology on a local and a global level. As a consequence, the peptides and lipids can form a wide variety of supramolecular assemblies in which the more hydrophobic sequences preferentially, but not exclusively, adopt transmembrane alignments and have the potential to form oligomeric structures similar to those suggested by the transmembrane helical bundle model. In contrast, charged amphipathic sequences tend to stay intercalated at the membrane interface where they cause pronounced disruptions of the phospholipid fatty acyl packing. At increasing local or global concentrations, the peptides result in transient membrane openings, rupture and ultimately lysis. Depending on peptide‐to‐lipid ratio, lipid composition and environmental factors (temperature, buffer composition, ionic strength, etc.), the same peptide sequence can result in a variety of those responses. Therefore, the SMART model has been introduced to cover the full range of possibilities. With such a view in mind, novel antimicrobial compounds have been designed from amphipathic polymers, peptide mimetics, combinations of ultra‐short polypeptides with hydrophobic anchors or small designer molecules. Copyright © 2015 European Peptide Society and John Wiley &amp; Sons, Ltd.

  • Quantum Chemical Interpretation of Ultrafast Luminescence Decay and Intersystem Crossings in Rhenium(I) Carbonyl Bipyridine Complexes

    Christophe Gourlaouen, Julien Eng, Miho Otsuka, Etienne Gindensperger, Chantal Daniel
    Journal of Chemical Theory and Computation, 2014, 11 (1), pp.99-110. ⟨10.1021/ct500846n⟩ | Publiée le 17 décembre 2014
    Article dans une revue

    Ultrafast luminescence decay and intersystem crossing processes through the seven low-lying singlet and triplet excited states of [Re (X)(CO)3(bpy)] (X = Cl, Br, I; bpy = 2,2′-bipyridine) are interpreted on the basis of time-dependent density functional theory (TD-DFT) electronic structure calculations performed in acetonitrile and including spin–orbit coupling (SOC) effects within the zeroth-order approximation.

  • Short-term effects of increasing CO2, nitrate and temperature on three Mediterranean macroalgae: biochemical composition

    Fl Figueroa, J Bonomi Barufi, Ej Malta, R Conde-Álvarez, U Nitschke, F Arenas, M Mata, S Connan, Mh Abreu, R Marquardt, F Vaz-Pinto, T Konotchick, Psm Celis-Plá, Michaël Hermoso, G Ordoñez, E Ruiz, P Flores, J de los Ríos, D Kirke, F Chow, Cag Nassar, D Robledo, Á Pérez-Ruzafa, E Bañares-España, M Altamirano, C Jiménez, N Korbee, K Bischof, Db Stengel
    Aquatic Biology, 2014, 22, pp.177-193. ⟨10.3354/ab00610⟩ | Publiée le 20 novembre 2014
    Article dans une revue

    Short-term effects of increasing pCO2; 380 ppm (LC) vs. 700 ppm (HC); at differentnitrogen levels; 5 μM nitrate (LN) vs. 50 μM (HN); on the contents of protein, mycosporine-likeamino acids (MAAs), phenolic compounds and total fatty acids, antioxidant activity, calcificationand C:N ratios were analyzed in 3 eulittoral Mediterranean macroalgae with different bio-opticalcharacteristics and carbon assimilation efficiencies: Cystoseira tamariscifolia (Heterokontophyta),Ulva rigida (Chlorophyta) and Ellisolandia elongata (Rhodophyta). After acclimation to differentpCO2 and nitrogen conditions for 6 d, the algae were subjected to a 4°C temperature increase for3 d. Increasing temperature and pCO2 produced alterations in the biochemical composition of the3 macroalgae. Short-term variations of protein levels were observed in U. rigida, with clearlydecreased values in the HCLN treatment. In C. tamariscifolia, protein decreased after the temper-ature increase but only under LC. The interaction of temperature and N affected phenolic com-pounds only in U. rigida and the content of MAAs in E. elongata. The functional patterns of the3 macroalgae in response to the pCO2, nitrogen and temperature regimes may be explained interms of their bio-optical characteristics and antioxidant activity. The vulnerability and acclima-tion of the 3 species to the expected variations of climate change factors are discussed.

  • Dual Function of the Cytochrome P450 CYP76 Family from Arabidopsis thaliana in the Metabolism of Monoterpenols and Phenylurea Herbicides

    Rene Hoefer, Benoit Boachon, Hugues Renault, Carole Gavira, Laurence Miesch, Juliana Iglesias, Jean-Francois Ginglinger, Lionel Allouche, Michel Miesch, Sébastien Grec, Romain Larbat, Daniele Werck-Reichhart
    Plant Physiology, 2014, 166 (3), pp.1149-1161. ⟨10.1104/pp.114.244814⟩ | Publiée le 1 novembre 2014
    Article dans une revue

    Comparative genomics analysis unravels lineage-specific bursts of gene duplications related to the emergence of specialized pathways. The CYP76C subfamily of cytochrome P450 enzymes is specific to Brassicaceae. Two of its members were recently associated with monoterpenol metabolism. This prompted us to investigate the CYP76C subfamily genetic and functional diversification. Our study revealed high rates of CYP76C gene duplication and loss in Brassicaceae, suggesting the association of the CYP76C subfamily with species-specific adaptive functions. Gene differential expression and enzyme functional specialization in Arabidopsis thaliana, including metabolism of different monoterpenols and formation of different products, support this hypothesis. In addition to linaloolmetabolism, CYP76C1, CYP76C2, and CYP76C4 metabolized herbicides belonging to the class of phenylurea. Their ectopic expression in the whole plant conferred herbicide tolerance. CYP76Cs from A. thaliana. thus provide a first example of promiscuous cytochrome P450 enzymes endowing effective metabolism of both natural and xenobiotic compounds. Our data also suggest that the CYP76C gene family provides a suitable genetic background for a quick evolution of herbicide resistance.

  • Inhibition of Escherichia coli respiratory complex I by Zn(2+)

    Marius Schulte, Dinah Mattay, Sebastien Kriegel, Petra Hellwig, Thorsten Friedrich
    Biochemistry, 2014, 53 (40), pp.6332-6339. ⟨10.1021/bi5009276⟩ | Publiée le 14 octobre 2014
    Article dans une revue

    The energy-converting NADH:ubiquinone oxidoreductase, respiratory complex I, couples NADH oxidation and quinone reduction with the translocation of protons across the membrane. Complex I exhibits a unique L shape with a peripheral arm extending in the aqueous phase and a membrane arm embedded in the lipid bilayer. Both arms have a length of ∼180 Å. The electron transfer reaction is catalyzed by a series of cofactors in the peripheral arm, while the membrane arm catalyzes proton translocation. We used the inhibition of complex I by zinc to shed light on the coupling of the two processes, which is not yet understood. Enzyme kinetics revealed the presence of two high-affinity binding sites for Zn(2+) that are attributed to the proton translocation pathways in the membrane arm. Electrochemically induced Fourier transform infrared difference spectroscopy demonstrated that zinc binding involves at least two protonated acidic residues. Electron paramagnetic resonance spectroscopy showed that one of the cofactors is only partially reduced by NADH in the presence of Zn(2+). We conclude that blocking the proton channels in the membrane arm leads to a partial block of the electron transfer in the peripheral arm, indicating the long-range coupling between both processes.

  • Biomimetic environment to study E. coli complex I through surface-enhanced IR absorption spectroscopy

    Sébastien Kriegel, Taro Uchida, Masatoshi Osawa, Thorsten Friedrich, Petra Hellwig
    Biochemistry, 2014, 53 (40), pp.6340-6347. ⟨10.1021/bi500955a⟩ | Publiée le 1 octobre 2014
    Article dans une revue

    In this study complex I was immobilized in a biomimetic environment on a gold layer deposited on an ATR-crystal in order to functionally probe the enzyme against substrates and inhibitors via surface-enhanced IR absorption spectroscopy (SEIRAS) and cyclic voltammetry (CV). To achieve this immobilization, two methods based on the generation of a high affinity self-assembled monolayer (SAM) were probed. The first made use of the affinity of Ni-NTA toward a hexahistidine tag that was genetically engineered onto complex I and the second exploited the affinity of the enzyme toward its natural substrate NADH. Experiments were also performed with complex I reconstituted in lipids. Both approaches have been found to be successful, and electrochemically induced IR difference spectra of complex I were obtained.

  • Ultrafast energy transfer in a Pd(II)-bridged bisporphyrin dyad

    Abdelhameed Mohammed, Adam Langlois, Paul-Ludovic Karsenti, Sébastien Richeter, Romain Ruppert, P. D. Harvey
    Journal of the Chemical Society, Chemical Communications, 2014, 50, pp.14609-14612. ⟨10.1039/C4CC05898D⟩ | Publiée le 26 septembre 2014
    Article dans une revue

    A free base porphyrin/zinc(II)porphyrin dyad bridged by a Pd(II) unit exhibits an ultrafast S1 energy transfer (1.5 × 10exp12 s−1) due to significant MO couplings between the acceptor and the donor and a non-nil atomic contribution of the Pd-atom in the frontier MOs, hence ensuring π-conjugation.

  • New Insights into the Hydrogen Bond Network in Al-MIL-53 and Ga-MIL-53

    Guillaume Ortiz, Gérald Chaplais, Jean-Louis Paillaud, Habiba Nouali, Joël Patarin, Jesus Raya, Claire Marichal
    Journal of Physical Chemistry C, 2014, 118 (38), pp.22021-22029. ⟨10.1021/jp505893s⟩ | Publiée le 25 septembre 2014
    Article dans une revue

    Metal-organic framework-type Al-, Ga-, and Ga(OH,F)-MIL-53 have been characterized by solid-state NMR and powder X-ray diffraction (PXRD). 1H 2D double-quantum−single-quantum (DQ-SQ) magic angle spinning (MAS) NMR experiments unambiguously evidence two inequivalent water molecules in Al-MIL-53_np_H2O. A careful reinvestigation of the XRD structure of hydrated Al-MIL-53 proves, for the first time, the doubling of the unit cell supporting the presence of two inequivalent water molecules. One type of water molecule is located in the type A channel, interacting with the aromatic protons of framework organic moieties, whereas the other type of water molecule is in the type B channel far away from aromatic protons. Assignment of the corresponding 1H resonances to each water molecule was possible. 1H 1D MAS NMR leads to the same conclusion (i.e., two inequivalent water molecules) for the isostructural gallium-based material thanks to the positioning of the hydrogen atoms by Rietveld refinement. Moreover, when Ga-MIL-53 is prepared with fluorine in the synthesis medium (giving Ga(OH,F)-MIL-53_np_H2O), the situation is different. 2D 1H-13C heteronuclear correlation MAS NMR, high-field 1H DQ−SQ, and radio-frequency-driven recoupling MAS NMR indicate that only one type of water molecule is found in this material, in agreement with the structure.

  • The Thermochemistry of London Dispersion‐Driven Transition Metal Reactions: Getting the ‘Right Answer for the Right Reason’

    Andreas Hansen, Christoph Bannwarth, Stefan Grimme, Predrag Petrović, Christophe Werlé, Jean-Pierre Djukic
    ChemistryOpen, 2014, 3 (5), pp.177-189. ⟨10.1002/open.201402017⟩ | Publiée le 4 septembre 2014
    Article dans une revue

    Abstract Reliable thermochemical measurements and theoretical predictions for reactions involving large transition metal complexes in which long‐range intramolecular London dispersion interactions contribute significantly to their stabilization are still a challenge, particularly for reactions in solution. As an illustrative and chemically important example, two reactions are investigated where a large dipalladium complex is quenched by bulky phosphane ligands (triphenylphosphane and tricyclohexylphosphane). Reaction enthalpies and Gibbs free energies were measured by isotherm titration calorimetry (ITC) and theoretically ‘back‐corrected’ to yield 0 K gas‐phase reaction energies (Δ E ). It is shown that the Gibbs free solvation energy calculated with continuum models represents the largest source of error in theoretical thermochemistry protocols. The (‘back‐corrected’) experimental reaction energies were used to benchmark (dispersion‐corrected) density functional and wave function theory methods. Particularly, we investigated whether the atom‐pairwise D3 dispersion correction is also accurate for transition metal chemistry, and how accurately recently developed local coupled‐cluster methods describe the important long‐range electron correlation contributions. Both, modern dispersion‐corrected density functions (e.g., PW6B95‐D3(BJ) or B3LYP‐NL), as well as the now possible DLPNO‐CCSD(T) calculations, are within the ‘experimental’ gas phase reference value. The remaining uncertainties of 2–3 kcal mol −1 can be essentially attributed to the solvation models. Hence, the future for accurate theoretical thermochemistry of large transition metal reactions in solution is very promising.

  • Solution Synthesis, Conformational Analysis, and Antimicrobial Activity of Three Alamethicin F50/5 Analogs Bearing a Trifluoroacetyl Label

    Marta de Zotti, Gema Ballano, Micha Jost, Evgeniy Salnikov, Burkhard Bechinger, Simona Oancea, Marco Crisma, Claudio Toniolo, Fernando Formaggio
    Chemistry and Biodiversity, 2014, 11 (8), pp.1163-1191. ⟨10.1002/cbdv.201300394⟩ | Publiée le 22 août 2014
    Article dans une revue

    Abstract We prepared, by solution‐phase methods, and fully characterized three analogs of the membrane‐active peptaibiotic alamethicin F50/5, bearing a single trifluoroacetyl (Tfa) label at the N‐terminus, at position 9 (central region) or at position 19 (C‐terminus), and with the three Gln at positions 7, 18, and 19 replaced by Glu(OMe) residues. To add the Tfa label at position 9 or 19, a γ ‐trifluoroacetylated α , γ ‐diaminobutyric acid (Dab) residue was incorporated as a replacement for the original Val 9 or Glu(OMe) 19 amino acid. We performed a detailed conformational analysis of the three analogs (using FT‐IR absorption, CD, 2D‐NMR, and X‐ray diffraction), which clearly showed that Tfa labeling does not introduce any dramatic backbone modification in the predominantly α ‐helical structure of the parent peptaibiotic. The results of an initial solid‐state 19 F‐NMR study on one of the analogs favor the conclusion that the Tfa group is a very promising reporter for the analysis of peptaibioticmembrane interactions. Finally, we found that the antimicrobial activities of the three newly synthesized analogs depend on the position of the Tfa label in the peptide sequence.

  • Unexpected Drastic Decrease in the Excited-State Electronic Communication between Porphyrin Chromophores Covalently Linked by a Palladium(II) Bridge

    Abdelhameed Mohammed, Paul-Ludovic Karsenti, Adam Langlois, Jean-François Lefebvre, Sébastien Richeter, Romain Ruppert, Pierre D. Harvey
    Chemistry - A European Journal, 2014, 20 (40), pp.12988-13001. ⟨10.1002/chem.201403146⟩ | Publiée le 14 août 2014
    Article dans une revue

    A dyad built up of a zinc(II) porphyrin and the corresponding free base, [Zn-Fb], fused to N-heterocyclic carbene (NHCs) ligands, respectively acting as singlet energy donor and acceptor, and a bridging trans-PdI2 unit, along with the corresponding [Zn-Zn] and [Fb-Fb] dimers were prepared and investigated by absorption and emission spectroscopy and density functional computations. Despite favorable structural and spectroscopic parameters, unexpectedly slow singlet energy transfer rates are measured in comparison with the predicted values by the Förster theory and those observed for other structurally related dyads. This observation is rationalized by the lack of large molecular orbital (MO) overlaps between the frontier MOs of the donor and acceptor, thus preventing a double electron exchange through the trans-PdI2 bridge, and by an electronic shielding induced by the presence of this same linker preventing the two chromophores to fully interact via their transition dipoles.

  • Evidence for Distinct Electron Transfer Processes in Terminal Oxidases from Different Origin by Means of Protein Film Voltammetry

    Thomas Meyer, Frederic Melin, Hao Xie, Iris von Der Hocht, Sylvia K. Choi, Mohamed R. Noor, Hartmut Michel, Robert B. Gennis, Tewfik Soulimane, Petra Hellwig
    Journal of the American Chemical Society, 2014, 136 (31), pp.10854-10857. ⟨10.1021/ja505126v⟩ | Publiée le 6 août 2014
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    Cytochrome aa3 from Paracoccus denitrificans and cytochrome ba3 from Thermus thermophilus, two distinct members of the heme–copper oxidase superfamily, were immobilized on electrodes modified with gold nanoparticles. This procedure allowed us to achieve direct electron transfer between the enzyme and the gold nanoparticles and to obtain evidence for different electrocatalytic properties of the two enzymes. The pH dependence and thermostability reveal that the enzymes are highly adapted to their native environments. These results suggest that evolution resulted in different solutions to the common problem of electron transfer to oxygen.

  • Steric Congestion at, and Proximity to, a Ferrous Center Leads to Hydration of α-Nitrile Substituents Forming Coordinated Carboxamides

    Nasser K. Thallaj, Pierre-Yves Orain, Aurore Thibon, Martina Sandroni, Richard Welter, Dominique Mandon
    Inorganic Chemistry, 2014, 53 (15), pp.7824 - 7836. ⟨10.1021/ic500096h⟩ | Publiée le 4 août 2014
    Article dans une revue

    The question of the conversion of nitrile groups into amides (nitrile hydration) by action of water in mild and eco-compatible conditions and in the presence of iron is addressed in this article. We come back to the only known example of hydration of a nitrile function into carboxamide by a ferrous [Fe(II)] center in particularly mild conditions and very efficiently and demonstrate that these unusual conditions result from the occurrence of steric stress at the reaction site and formation of a more stable end product. Two bis(cyano-substituted) (tris 2-pyridyl methyl amine) ligands have been prepared, and the structures of the corresponding FeCl2 complexes are reported, both in the solid state and in solution. These two ligands only differ by the position of the nitrile group on the tripod in the α and β position, respectively, with respect to the pyridine nitrogen. In any case, intramolecular coordination is impossible. Upon action of water, the nitrile groups are hydrated however only if they are located in the α position. The fact that the β-substituted β-(NC)2TPAFeCl2 complex is not water sensitive suggests that the reaction proceeds in an intramolecular way at the vicinity of the metal center. In the bis α-substituted α-(NC)2TPAFeCl2 complex, both functions are converted in a very clean fashion, pointing out that this complex exhibits ligand flexibility and is not deactivated after the first hydration. At a preparative scale, this reaction allows the one-pot conversion of the bis(cyano-substituted) tripod into a bis(amido-substituted) one in particularly mild conditions with a very good yield. Additionally, the XRD structure of a ferric compound in which the two carboxamido ligands are bound to the metal in a seven-coordinate environment is reported.

  • Combining NHC bis-Phenolate Ligands with Oxophilic Metal Centers: A Powerful Approach for the Development of Robust and Highly Effective Organometallic Catalysts

    Stéphane Bellemin-Laponnaz, Samuel Dagorne, Ralf Duempelnnann, Pascal Steffanut
    CHIMIA, 2014, 68 (7-8), pp.500-504. ⟨10.2533/chimia.2014.500⟩ | Publiée le 1 août 2014
    Article dans une revue

    The present paper describes an overview of a novel family of tridentate NHC pincer ligand in which two phenoxide moieties are directly connected to the nitrogen atoms of a central N-heterocyclic carbene. It was envisioned that such a structure might be suitable for coordination to a variety of metal centers across the periodic table, including oxophilic metals. Various metal complexes bearing such ligand are indeed readily accessible in high yields via straightforward routes. Interestingly, a robust zirconium-NHC complex was found to polymerize rac-lactide in a highly controlled, living and stereoselective manner to afford heterotactic PLA.

  • Hybrid paramagnetic-ferromagnetic quantum computer design based on electron spin arrays and a ferromagnetic nanostripe.

    Jérôme Tribollet
    The European Physical Journal B: Condensed Matter and Complex Systems, 2014, 87 (8), ⟨10.1140/epjb/e2014-50147-8⟩ | Publiée le 1 août 2014
    Article dans une revue

    Designing an assembly of quantum nano-objects which can interact between themselves and be manipulated by external fields, while staying isolated from their noisy environment is the key for the development of future quantum technologies, such as quantum computers and sensors. Electron spins placed in a magnetic field gradient, interacting by dipolar magnetic couplings and manipulated by microwave pulses represent a possible architecture for a quantum computer. Here, a general design for the practical implementation of such nanodevice is presented and illustrated on the example of electron spins in silicon carbide placed nearby a permalloy ferromagnetic nanostripe. Firstly, the confined spin wave resonance spectrum of the nanostripe and the properties of its magnetic field gradient are calculated. Then, one shows how to avoid microwave driven electron spin decoherence. Finally, one shows that decoherence due to ferromagnetic fluctuations is negligible below room temperature for spins placed far enough from the nanostripe.

  • Diarylethene-Containing Carbon-Rich Ruthenium Organometallics: Tuning of Electrochromism

    Yifei Liu, Cheikh Mbacké Ndiaye, Corinne Lagrost, Karine Costuas, Sylvie Choua, Philippe Turek, Lucie Norel, Stéphane Rigaut
    Inorganic Chemistry, 2014, 53 (15), pp.8172-8188. ⟨10.1021/ic5013044⟩ | Publiée le 17 juillet 2014
    Article dans une revue

    The association of a dithienylethene (DTE) system with ruthenium carbon-rich systems allows reaching sophisticated and efficient light- and electro-triggered multifunctional switches R-[Ru]-CC-DTE-CC-[Ru]-R, featuring multicolor electrochromism and electrochemical cyclization at remarkably low voltage. The spin density on the DTE ligand and the energetic stabilization of the system upon oxidation could be manipulated to influence the closing event, owing to the noninnocent behavior of carbon-rich ligands in the redox processes. A combination of spectroscopic (UV−vis−NIR−IR and EPR) and electrochemical studies, with the help of quantum chemical calculations, demonstrates that one can control and get a deeper understanding of the electrochemical ring closure with a slight modification of ligands remote from the DTE unit. This electrochemical cyclization was established to occur in the second oxidized state (EEC mechanism), and the kinetic rate constant in solution was measured. Importantly, these complexes provide an unprecedented experimental means to directly probe the remarkable efficiency of electronic (spin) delocalization between two trans carbon-rich ligands through a metal atom, in full agreement with the theoretical predictions. In addition, when no cyclization occurs upon oxidation, we cou d achieve a redox-triggered magnetic switch.

  • Role of pre-organization around the azaphosphatrane catalyst's active site in the conversion of CO2 to cyclic carbonates

    Bastien Chatelet, Erwann Jeanneau, Jean-Pierre Dutasta, Vincent Robert, Alexandre Martinez, Véronique Dufaud
    Catalysis Communications, 2014, 52, pp.26-30. ⟨10.1016/j.catcom.2014.04.004⟩ | Publiée le 1 juillet 2014
    Article dans une revue

    Various N-substituted azaphosphatranes have been prepared and successfully applied to the synthesis of styrene carbonates from CO2 and epoxides. Enhancement of the catalytic properties of the azaphosphatrane was achieved upon pre-organization of the active site through hydrogen-bonding.

  • MFI-type zeolite nanosheets for gas-phase aromatics chlorination: a strategy to overcome mass transfer limitations

    Marilyne Boltz, Pit Losch, Benoit Louis, Guillaume Rioland, Lydie Tzanis, Jean Daou
    RSC Advances, 2014, 4 (52), pp.27242-27249. ⟨10.1039/C4RA02747G⟩ | Publiée le 10 juin 2014
    Article dans une revue

    The continuous gas-solid (environmentally-friendly) chlorination of deactivated arenes using trichloroisocyanuric acid (TCCA, C3N3O3Cl3) as a chlorination agent was chosen to compare the catalytic performances of various MFI-type catalysts in a reaction demanding a strong acidity. Mass transfer limitations were also evaluated by reacting either chloro-or nitrobenzene through a ZSM-5 zeolite porous network having different crystal sizes and morphologies. Whereas, the reaction rate was completely controlled by internal diffusion in 10-15 mu m-sized big ZSM-5 zeolite crystals (Weisz modulus, phi(big) crystals similar to 10), the impact of internal diffusion could be ruled out for ZSM-5 nanocrystals (200-400 nm) and in stacked ZSM-5 nanosheets (thickness 2 nm). Based on reactivity differences in arene halogenation between the two nano-sized ZSM-5 zeolites, we were able to estimate the quantity of mild acidic silanol groups in ZSM-5 nanosheets to roughly 1/3 of the total amount of BrOnsted acid sites.

  • On the design of supramolecular assemblies made of peptides and lipid bilayers

    Patricia Kemayo Koumkoua, Christopher Aisenbrey, Evgeniy Salnikov, Omar Rifi, Burkhard Bechinger
    Journal of Peptide Science, 2014, 20 (7), pp.526-536. ⟨10.1002/psc.2656⟩ | Publiée le 7 juin 2014
    Article dans une revue

    Peptides confer interesting properties to materials, supramolecular assemblies and to lipid membranes and are used in analytical devices or within delivery vehicles. Their relative ease of production combined with a high degree of versatility make them attractive candidates to design new such products. Here, we review and demonstrate how CD‐ and solid‐state NMR spectroscopic approaches can be used to follow the reconstitution of peptides into membranes and to describe some of their fundamental characteristics. Whereas CD spectroscopy is used to monitor secondary structure in different solvent systems and thereby aggregation properties of the highly hydrophobic domain of p24, a protein involved in vesicle trafficking, solid‐state NMR spectroscopy was used to deduce structural information and the membrane topology of a variety of peptide sequences found in nature or designed. 15 N chemical shift solid‐state NMR spectroscopy indicates that the hydrophobic domain of p24 as well as a designed sequence of 19 hydrophobic amino acid residues adopt transmembrane alignments in phosphatidylcholine membranes. In contrast, the amphipathic antimicrobial peptide magainin 2 and the designed sequence LK15 align parallel to the bilayer surface. Additional angular information is obtained from deuterium solid‐state NMR spectra of peptide sites labelled with 2 H 3 ‐alanine, whereas 31 P and 2 H solid‐state NMR spectra of the lipids furnish valuable information on the macroscopic order and phase properties of the lipid matrix. Using these approaches, peptides and reconstitution protocols can be elaborated in a rational manner, and the analysis of a great number of peptide sequences is reviewed. Finally, a number of polypeptides with membrane topologies that are sensitive to a variety of environmental conditions such as pH, lipid composition and peptide‐to‐lipid ratio will be presented. Copyright © 2014 European Peptide Society and John Wiley &amp; Sons, Ltd.

  • QSPR ensemble modelling of the 1:1 and 1:2 complexation of Co2+, Ni2+, and Cu2+ with organic ligands: relationships between stability constants

    Vitaly Solovyev, Alexandre Varnek, Aslan Tsivadze
    Journal of Computer-Aided Molecular Design, 2014, 28 (5), pp.549-564. ⟨10.1007/s10822-014-9741-3⟩ | Publiée le 16 mai 2014
    Article dans une revue

    Quantitative structure–property relationship (QSPR) modeling of stability constants for the metal:ligand ratio 1:1 (logK) and 1:2 (logβ 2) complexes of 3 transition metal ions with diverse organic ligands in aqueous solution was performed using ensemble multiple linear regression analysis and substructural molecular fragment descriptors. The modeling was performed on the sets containing 396 and 132 (Co2+), 613 and 233 (Ni2+), 883 and 257 (Cu2+) logK and logβ 2 values, respectively. The models have been validated in external fivefold cross-validations procedure as well as on the external test set containing new ligands recently reported in the literature. Predicted logK and logβ 2 values were calculated as arithmetic means of several hundred individual models (consensus models) using their applicability domains in averaging. The root mean squared error of predictions varies from 0.94 to 1.2 (logK) and from 1.2 to 1.4 (logβ 2) which is close to observed experimental systematic errors. Linear correlations between experimental logK values for pair of metal ions were evaluated. For all metal ions and ligands forming both 1:1 and 1:2 complexes the following ratio is observed: logβ 2/logK = 1.8 ± 0.1, n = 492.

  • Synthesis of the First Water-Soluble Hemicryptophane Host: Selective Recognition of Choline in Aqueous Medium

    Aline Schmitt, Vincent Robert, Jean-Pierre Dutasta, Alexandre Martinez
    Letters in Organic Chemistry, 2014, 16 (9), pp.2374-2377. ⟨10.1021/ol500706z⟩ | Publiée le 1 mai 2014
    Article dans une revue

    The first water-soluble hemicryptophane cage compound, 4, was synthesized in seven steps from commercially available products, and its complexation properties were studied. NMR and ITC experiments indicate that 4 is an efficient receptor for choline in water (ΔG° = −5.2 kcal mol–1). High substrate selectivity was achieved since no complexation was observed for its closely related substrates: glycine betaine and betaine aldehyde. Density functional theory calculations were performed to analyze the interactions that are involved in the formation of the inclusion complex.

  • Subcellular Localization and Transport Kinetics of Ruthenium Organometallic Anticancer Compounds in Living Cells: A Dose-Dependent Role for Amino Acid and Iron Transporters

    M Klajner, Cynthia Licona, L Fetzer, Pascal Hébraud, Georg Mellitzer, Michel Pfeffer, Sebastien Harlepp, Christian Gaiddon
    Inorganic Chemistry, 2014, 53 (10), pp.5150-5158. ⟨10.1021/ic500250e⟩ | Publiée le 1 mai 2014
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    Ruthenium-based compounds are developed for anticancer treatment, but their mode of action including their import mechanism and subcellular localization remains elusive. Here, we used the intrinsic luminescent properties of cytotoxic organoruthenium (Ru(II)) compounds obtained with an anionic cyclometalated 2-phenylpyridine chelate and neutral aromatic chelating ligands (e.g., phenanthrolines) to follow their behavior in living cells. We established that the difference in sensitivity between cancer cells and noncancerous cells toward one of the compounds correlates with its import kinetics and follows a balance between active and passive transport. The active-transport mechanism involves iron and amino-acid transporters, which are transcriptionally regulated by the drug. We also demonstrated a correlation between the accumulation of these compounds in specific compartments (endoplasmic reticulum, nucleus, mitochondria) and the activation of specific cytotoxic mechanisms such as the rnitochondrial stress pathway. Our study pinpoints a novel and complex mechanism of accumulation of ruthenium drugs in cancer cells.

  • Synthesis of Well-Defined Dawson-Type Poly(N,N-diethylacrylamide) Organopolyoxometalates

    Jennifer Lesage de la haye, Patricia Beaunier, Laurent Ruhlmann, Bernold Hasenknopf, Emmanuel Lacôte, Jutta Rieger
    ChemPlusChem, 2014, 79 (2), pp.250-256. ⟨10.1002/cplu.201300346⟩ | Publiée le 1 février 2014
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    An organotin-substituted Dawson-type phosphotungstate was covalently linked to a trithiocarbonate group by postfunctionalization methods. This organopolyoxometalate led to a series of polyoxometalate (POM)–poly(N,N-diethylacrylamide) hybrids in a controlled way through reversible addition–fragmentation chain transfer (RAFT) polymerization. Detailed comparison with and without the presence of POMs revealed that they do not profoundly disturb the RAFT mechanism, despite their oxidative power. The molar masses of the polymers were in the range of 10 to 100 kg mol−1 and molar mass dispersities of the composites were low (Mw/Mn<1.5). The POM building block in the hybrids retained the photocatalytic reactivity of the parent Dawson polyanion [P2W18O62]6−. Smaller, more homogeneous, and colloidally more stable silver nanoparticles were formed with the covalently linked POM–polymer compound than with its single unbound components

  • Synthesis and characterization of oxygen-functionalized-NHC silver(I) complexes and NHC transmetallation to nickel(II).

    Sophie Hameury, Pierre de Frémont, Pierre-Alain Breuil, Hélène Olivier-Bourbigou, Pierre Braunstein
    Dalton Transactions, 2014, 43 (12), pp.4700-4710. ⟨10.1039/c3dt52773e⟩ | Publiée le 20 janvier 2014
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    The new oxygen-functionalized-NHC silver(I) complexes bis(l-{2,6-diisopropylphenyl)-3-(2-hydroxyethyl)-1H-imidazol-2(3H)-ylidene)silver(I) chloride ([Ag{lmDiPP(EtOH)}2]CI, 4), bis(1-(2-hydroxyethyl)-3-mesityl-1H-imidazol-2(3H)-ylidene )silver(I) chloride ([Ag {lmMes(EtOH) }2]CI, 5),bis(l-(2-hydroxyethyl)-3-methyl-1H-imidazol-2(3H)-ylidene )silvet{l) chloride ([Ag { lmMe(EtOH) }2]Cl, 6), bis( l-(2,6-diisopropylphenyl)-3 -(2-hydroxyethyl)-1 H-imidazol-2(3H)-ylidene)silver(I) tetrafluoroborate ([Ag {ImDiPP(EtOH) }2]BF 4, 9) and bis( l-{2,6-diisopropylphenyl)-3-(2-methoxyethyl)IH-imidazol-2(3H)-ylidene)silver(I) chloride ([Ag{ImDiPP(EtOMe)}2]CI, 13), have been synthesized and fully characterized by NMR spectroscopy and single crystal X-ray diffraction. For some complexes, an uncommon heteronuclear coupling of 4J{'071109 Ag-1H) was unveiled. Their transmetallation ability was assessed in presence of different nickel(II) sources and the bis-NHC Ni{Il) complex bis( 1-(2,6-diisopropylphenyl )-3 -(2-methoxyethyl)-1 H-imidazol-2(3H)-ylidene )nickel{ll) chloride ([NiC12{ImDiPP(Et0Me)} 2], 15) was obtained from 13 and shown by X-ray diffraction to have a transarrangement of the two NHC ligands. In contrast, it was found with the other Ag{I) NHC complexes that the acidity of the alcohol OH proton was detrimental for the transmetallation process, and reprotonation of the CNHc carbon to give the corresponding imidazolium salt was observed.

  • Cyclic [4]Rotaxanes Containing Two Parallel Porphyrinic Plates: Toward Switchable Molecular Receptors and Compressors.

    Fabien Durola, Valérie Heitz, Felipe Reviriego, Cécile Roche, Jean-Pierre Sauvage, Yann Trolez
    Accounts of Chemical Research, 2014, 47 (2), pp.633-645. ⟨10.1021/ar4002153⟩ | Publiée le 15 janvier 2014
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    : Twenty years ago, researchers considered the synthesis of simple rotaxanes a challenging task, but with the rapid development of this field, chemists now view these interlocking molecules as accessible synthetic targets. In a major advance for the field, researchers have developed transition metals or organic molecules as templating structures, making it easier to construct these molecular systems. In addition, chemists have found ways to introduce new functional groups, which have given these compounds new properties. Today researchers can also construct multirotaxanes consisting of several individual components, but the synthesis of the most complex structures remains challenging. This Account primarily discusses the cyclic [4]rotaxanes incorporating porphyrins that the Strasbourg group has synthesized and studied during the past few years. These cyclic [4]rotaxanes consist of two rigid rods threaded through the four rings of two molecules of a bis-macrocycle, and the synthetic strategy used for making them relies on the copper(I)-driven "gathering-and-threading" reaction. The formation of the threaded precursors was mostly quantitative, and the quadruple stoppering reaction leading to the target compound produces high yields because of the efficient copper-catalyzed azide-alkyne cycloaddition (CuAAC) or click chemistry reaction. These rotaxanes behave as receptors for various ditopic guests. We prepared and studied two types of molecules: (i) a rigid compound whose copper(I) complex has a well-defined shape, with high selectivity for the guest geometry and (ii) a much more flexible [4]rotaxane host that could act as a distensible receptor. The rigid [4]rotaxane was crystallized, affording a spectacular X-ray structure that matched the expected chemical structure. In addition, metalation or demetalation of the rigid [4]rotaxane induces a drastic geometric rearrangement. The metal-free compound is flat without a binding pocket, while the copper-complexed species forms a rectangle-like structure. The removal of copper(I) also expels any complexed guest molecule, and this process is reversible, making the rigid porphyrinic [4]rotaxane a switchable receptor. The rigid [4]rotaxane was highly selective for short, ditopic guests in its copper(I)-complexed form, but the flexible copper(I)-complexed [4]rotaxane proved to be a versatile receptor. Its conformation can adjust to the size of the guest molecule similar to the induced fit mechanism that some enzymes employ with substrates.

  • A Supramolecular Photosynthetic Model Made of a Multiporphyrinic Array Constructed around a C 60 Core and a C 60 –Imidazole Derivative

    K. Yoosaf, Julien Iehl, Iwona Nierengarten, Mohamed Hmadeh, Anne-Marie Albrecht-Gary, Jean‐françois Nierengarten, Nicola Armaroli
    Chemistry - A European Journal, 2014, 20 (1), pp.223-231. ⟨10.1002/chem.201303481⟩ | Publiée le 3 janvier 2014
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    Abstract The photophysical properties of a supramolecular fullerene–porphyrin ensemble resulting from the self‐assembly of a pyrrolidinofullerene–imidazole derivative ( F1 ) with a multimetalloporphyrin array constructed around a hexasubstituted fullerene core ( F(ZnP) 12 ) have been investigated. The fullerene hexa‐adduct core of the host system does not play any active role in the cascade of photoinduced events of the supramolecular ensemble, indeed no intercomponent photoinduced processes could be observed in host F(ZnP) 12 . In contrast, upon axial coordination with the monosubstituted fullerene guest F1 , a quantitative quenching of the fluorescence signal of the metalloporphyrins was observed for the supramolecular complex [F(ZnP) 12 (F1) n ] both in polar and nonpolar solvents. In toluene, the supramolecular ensemble exhibits a charge transfer emission centered around 930 nm, suggesting the occurrence of intramolecular face‐to‐face interactions of F1 with neighboring metalloporphyrin moieties within the self‐assembled photoactive array. This mechanism is supported by the fact that a one order of magnitude increase in the binding constant was observed for the supramolecular complex [F(ZnP) 12 (F1) n ] when compared with a reference system lacking the pyrrolidinofullerene unit. In benzonitrile, a long‐lived charge‐separated state ( τ =0.3 μs) has been detected for the supramolecular adduct.

  • Directional properties of fluorenylidene moieties in unsymmetrically substituted N-heterocyclic carbenes. Unexpected CH activation of a methylfluorenyl group with palladium. Use in palladium catalysed Suzuki- Miyaura cross coupling of aryl chlorides

    Matthieu Teci, Eric Brenner, Dominique Matt, Christophe Gourtaouen, Loic Toupet
    Dalton Transactions, 2014, 43 (32), pp.12251-12262. ⟨10.1039/c4dt01102c⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    Benzimidazolium salts having their two nitrogen atoms substituted by different 9-alkylfluorenyl groups (4a-e and 4g, alkyl(1)/alkyl(2) = Me/Et, Me/Pr, Me/n-Bu, Me/i-Pr, Me/Bn, Me/CH2SMe have been synthesised in high yields in two or three steps from N,N'-bis(9H-fluoren-9-ylidene)benzene-1,2-diamine (1). The imidazolium salts 4a-e were converted readily into the corresponding PEPPSI-type palladium complexes (PEPPSI = pyridine-enhanced precatalyst preparation stabilisation and initiation), while reaction of the methylthioether-substituted salt 4g with PdCl2/K2CO3/pyridine afforded the palladacycle 5g resulting from metallation of the methyl group attached to the fluorenylidene moiety. NMR and X-ray diffraction studies revealed that the carbene ligands in 5a-5e behave as clamp-like ligands, the resulting metal confinement arising from a combination of the orientational properties of the fluorenylidene moieties that push the alkyl groups towards the metal centre and attractive anagostic interactions involving CH2(fluorenyl) groups. Complexes 5a-e were assessed in Suzuki-Miyaura cross-coupling reactions. Like their symmetrical analogues they displayed high activity in the coupling of phenyl boronic acid with p-tolyichloride but their performance remained slightly inferior to that of the related, symmetrical Et/Et complex 5h.

  • A fully enzymatic method for site-directed spin labeling of long RNA

    Isabelle Lebars, Bertrand Vileno, Sarah Bourbigot, Philippe Turek, Philippe Wolff, Bruno Kieffer
    Nucleic Acids Research, 2014, 42 (15), pp.e117-e117. ⟨10.1093/nar/gku553⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    Site-directed spin labeling is emerging as an essential tool to investigate the structural and dynamical features of RNA. We propose here an enzymatic method, which allows the insertion of a paramagnetic center at a specific position in an RNA molecule. The technique is based on a segmental approach using a ligation protocol with T4 RNA ligase 2. One transcribed acceptor RNA is ligated to a donor RNA in which a thio-modified nucleotide is introduced at its 5′-end by in vitro transcription with T7 RNA polymerase. The paramagnetic thiol-specific reagent is subsequently attached to the RNA ligation product. This novel strategy is demonstrated by introducing a paramagnetic probe into the 55 nucleotides long RNA corresponding to K-turn and Specifier Loop domains from the Bacillus subtilis tyrS T-Box leader RNA. The efficiency of the coupling reaction and the quality of the resulting spin-labeled RNA were assessed by Mass Spectrometry, Electron Paramagnetic Resonance (EPR) and Nuclear Magnetic Resonance (NMR). This method enables various combinations of isotopic segmental labeling and spin labeling schemes, a strategy that will be of particular interest to investigate the structural and dynamical properties of large RNA complexes by NMR and EPR spectroscopies.

  • Alternating electro-copolymerization of zinc-beta-octaethylporphyrin with a flexible bipyridinium

    Zhaohui Huo, Jean-Paul Gisselbrecht, Rana Farha, Michel Goldmann, Eric Saint-Aman, Christophe Bucher, Laurent Ruhlmann
    Electrochimica Acta, 2014, 122 (SI), pp.108-117. ⟨10.1016/j.electacta.2013.10.058⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    A porphyrin copolymer has been obtained upon submitting a mixture of zinc-beta-octaethylporphyrin (OEP) and 1,1 `'-(1,3-propanediyl)bis-4,4'-bipyridinium to an electropolymerization procedure. The polymerization process is based on a nucleophilic attack of the pyridyl nitrogen atoms at the meso positions of the electrogenerated dication porphyrins. The resulting film has been characterized by UV-visible absorption spectroscopy and atomic force microscopy. The redox properties of the film have been thoroughly investigated by electrochemical and spectroelectrochemical techniques. The collected experimental data support the existence of interactions between the porphyrin and viologen fragments within the films. (C) 2013 Elsevier Ltd. All rights reserved.

  • One-step synthesis of a highly homogeneous SBA–NHC hybrid material: en route to single-site NHC–metal heterogeneous catalysts with high loadings

    Mansuy Rocquin, Mickaël Henrion, Marc-Georg Willinger, Philippe Bertani, Michael J Chetcuti, Benoît Louis, Vincent Ritleng
    Dalton Transactions, 2014, 43 (9), pp.3722. ⟨10.1039/C3DT52982G⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    <div><p>The one-step synthesis of a mesoporous silica of SBA type, functionalized with a 1-(2,6-diisopropylphenyl)-3-propyl-imidazolium (iPr 2 Ar-NHC-propyl) cation located in the pore channels, is described. This material was obtained by the direct hydrolysis and co-condensation of tetraethylorthosilicate (TEOS) and 1-(2,6-diisopropylphenyl)-3-[3-(triethoxysilyl)propyl]-imidazolium iodide in the presence of Pluronic P123 as a non-ionic structure-directing agent and aqueous HCl (37%) as an acid catalyst. Small-angle X-ray diffraction measurements, scanning and transmission electron microscopies, as well as dinitrogen sorption analyses revealed that the synthesized material is highly mesoporous with a 2D hexagonal arrangement of the porous network. 13 C and 29 Si CP-MAS NMR spectroscopy confirmed that the material contains intact iPr 2 Ar-NHC-propyl cations, which are covalently anchored via silicon atoms fused into the silica matrix. Moreover, comparison of the latter data with those of an analogous post-synthetic grafted SBA-NHC material allowed us to establish that, as expected, (i) it is most probably more homogeneous and (ii) it shows a more robust anchoring of the organic units. Finally, elemental mapping by energy dispersive X-ray spectroscopy in the scanning electron microscope demonstrated a very homogeneous distribution of the imidazolium units within the one-pot material, moreover with a high content. This study thus demonstrates that a relatively bulky and hydrophilic imidazolium unit can be directly cocondensed with TEOS in the presence of a structure-directing agent to provide in a single step a highly ordered and homogeneous mesoporous hybrid SBA-NHC material, possessing a significant number of cationic NHC sites. † Electronic supplementary information (ESI) available: NMR spectra of 1-4, and powder XRD pattern of 2. See</p></div>

  • Click synthesis of symmetric bis-triazol ligands and full characterisation of their copper(II)-complexes

    Zakia Benkhellat, Mustapha Allali, Marc Beley, Emmanuel Wenger, Maxime Bernard, Nathalie Parizel, Katalin Selmeczi, Jean-Pierre Joy
    New Journal of Chemistry, 2014, 38 (1), pp.419-429. ⟨10.1039/c3nj00570d⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    Eight novel ligands were prepared from a known symmetric diaza-18-crown-6 (cyclic ligand) and two commercial N,N'-dimethyl-alkyl diamines (acyclic ligands) via the Cu(I)-catalyzed Huisgen dipolar cycloaddition, All C-2-symmetric isolated ligands readily formed stable crystalline 1:1-copper(II) complexes with cupric perchlorate. Their structural, electrochemical and physico-chemical properties were fully investigated with the help of X-ray diffraction, cyclic voltammetry, FT-IR, UV-visible, and electron paramagnetic resonance (EPR) spectroscopies. Planar - or nearly planar - arrangement of the two N3-triazole nitrogens and the two tertiary amine pivot nitrogens was found in one single four-coordinated species, in four five-coordinated species, and three six-coordinated species, with one or two solvent molecule(s), or two oxygen atoms of the crown ether, occupying the axial position(s) in the solid sate. The electron-donating or electron-withdrawing effect of the N1-substituent on the triazol was found to influence the Cu(II)/Cu(I) redox potential of all studied complexes in DMF. The EPR-spectrum of cyclic complexes in frozen DMF at 100 K exhibited two mononuclear species, one of them likely promoting the formation of dinuclear species as a minor component, whereas most acyclic complex spectra were quite similar.

  • Phosphinocyclodextrins as confining units for catalytic metal centres. Applications to carbon-carbon bond forming reactions

    Matthieu Jouffroy, Rafael Gramage-Doria, David Sémeril, Dominique Armspach, Dominique Matt, Werner Oberhauser, Loic Toupet
    Beilstein Journal of Organic Chemistry, 2014, 10, pp.2388-2405. ⟨10.3762/bjoc.10.249⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    The capacity of two cavity-shaped ligands, HUGPHOS-1 and HUGPHOS-2, to generate exclusively singly phosphorus-ligated complexes, in which the cyclodextrin cavity tightly wraps around the metal centre, was explored with a number of late transition metal cations. Both cyclodextrin-derived ligands were assessed in palladium-catalysed Mizoroki–Heck coupling reactions between aryl bromides and styrene on one hand, and the rhodium-catalysed asymmetric hydroformylation of styrene on the other hand. The inability of both chiral ligands to form standard bis(phosphine) complexes under catalytic conditions was established by high-pressure NMR studies and shown to have a deep impact on the two carbon–carbon bond forming reactions both in terms of activity and selectivity. For example, when used as ligands in the rhodium-catalysed hydroformylation of styrene, they lead to both high isoselectivity and high enantioselectivity. In the study dealing with the Mizoroki–Heck reactions, comparative tests were carried out with WIDEPHOS, a diphosphine analogue of HUGPHOS-2.

  • Tridentate Complexes of Group 10 Bearing Bis-Aryloxide N-Heterocyclic Carbene Ligands: Synthesis, Structural, Spectroscopic, and Computational Characterization

    Etienne Borré, Georges Dahm, Alessandro Aliprandi, Matteo Mauro, Samuel Dagorne, Stéphane Bellemin-Laponnaz
    Organometallics, 2014, 33 (17), pp.4374-4384. ⟨10.1021/om5003446⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    A series of group 10 complexes featuring chelating tridentate bis-aryloxide N-heterocyclic carbenes were synthesized and characterized by using different techniques. Ni(II), Pd(II), and Pt(II) complexes were isolated in good yields by straightforward direct metalation of the corresponding benzimidazolium or imidazolium precursors in a one-pot procedure. All of the compounds were fully characterized, including single-crystal X-ray diffractometric determination for three of the derivatives. In the solid state, the complexes adopt a typical square-planar coordination geometry around the platinum atom, sizably distorted in order to comply with the geometrical constraints imposed by the bis-aryloxide N-heterocyclic carbene ligand. For platinum and palladium derivatives, a joint experimental and theoretical characterization was performed in order to study the optical properties of the newly prepared complexes by means of electronic absorption and steady-state and time-resolved photophysical techniques as well as density functional theory (DFT) and time-dependent DFT in both vacuum and solvent. When the temperature was lowered to 77 K in frozen glassy matrix, three platinum complexes showed broad and featureless, yet weak, photoluminescence in the green region of the visible spectrum with excited-state lifetimes on the order of a few microseconds. On the basis of joint experimental and computational findings and literature on platinum complexes, such emission was assigned to a triplet-manifold metal-ligand-to-ligand charge transfer ((MLLCT)-M-3) transition.

  • Redox and Luminescent Properties of Robust and Air-Stable N-Heterocyclic Carbene Group 4 Metal Complexes

    Charles Romain, Sylvie Choua, Jean-Paul Collin, Martine Heinrich, Corinne Bailly, Lydia Karmazin, Stéphane Bellemin-Laponnaz, Samuel Dagorne
    Inorganic Chemistry, 2014, 53 (14), pp.7371-7376. ⟨10.1021/ic500718y⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    Robust and air-stable homoleptic group 4 complexes of the type M(L)(2) [1-3; M = Ti, Zr, Hf; L = dianionic bis(aryloxide) N-heterocyclic carbene (NHC) ligand) were readily synthesized from the NHC proligand 1,3-bis(3,5-di-tert-butyl-2-hydroxyphenyl)imidazolinium chloride (H3L,Cl) and appropriate group 4 precursors. As deduced from cyclic voltammetry studies, the homoleptic bis-adduct zirconium and hafnium complexes 2 and 3 can also be oxidized, with up to four one-electron-oxidation signals for the zirconium derivative 2 (three reversible signals). Electron paramagnetic resonance data for the one-electron oxidation of complexes 1-3 agree with the formation of ligand-centered species. Compounds 2 and 3 are luminescent upon excitation in the absorption band at 362 nm with emissions at 485 and 534 nm with good quantum yields (phi = 0.08 and 0.12) for 2 and 3, respectively. In contrast, the titanium complex 1 does not exhibit luminescent properties upon excitation in the absorption band at 310 and 395 nm. Complexes 2 and 3 constitute the first examples of emissive nonmetallocene group 4 metal complexes.

  • Confining Phosphanes Derived from Cyclodextrins for Efficient Regio- and Enantioselective Hydroformylation

    Matthieu Jouffroy, Rafael Gramage-Doria, Dominique Armspach, David Semeril, Werner Oberhauser, Dominique Matt, Loic Toupet
    Angewandte Chemie International Edition, 2014, 53, pp.3937 - 3940. ⟨10.1002/anie.201311291⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    Two confining phosphane ligands derived from either a-or b-cyclodextrin produce singly P III-ligated metal complexes with unusual coordination spheres. High-pressure NMR studies have revealed that rhodium hydride complexes of the same type are also formed under hydroformylation conditions. This unique feature strongly favors the formation of the branched aldehyde at the expense of the linear one with high enantioselectivity in the rhodium-catalyzed hydroformy-lation of styrene.

  • Structural studies of adsorbed protein (betalactoglobulin) on natural clay (montmorillonite)

    Ali Assifaoui, Lucie Huault, Cyrielle Maissiat, Chloé Roullier-Gall, Philippe Jeandet, Jerôme Hirschinger, Jesus Raya, Maguy Jaber, Jean-François Lambert, Philippe Cayot, Régis Gougeon, Camille Loupiac
    RSC Advances, 2014, 4 (105), pp.61096-61103. ⟨10.1039/C4RA11607K⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    In this work, the adsorption of a small globular protein (betalactoglobulin, BLG), on a natural montmorillonite clay (Mt) was investigated in acidic buffer (pH = 3). The combination of different characterization techniques such as zetametry, X-ray diffraction, transmission electronic microscopy, fluorescence and solid state nuclear magnetic resonance spectroscopies shed light on the interaction mechanism between the clay mineral and the proteins. For low BLG concentration, a slight increase of the interlayer spacing of the clay mineral was noticed as well as structural changes of the protein. In contrast, as the concentration of BLG increased, the adsorption led to a partial exfoliation of the clay mineral, accompanied with significant secondary structural changes of the protein characterized by a loss of β-sheet organization. Altogether, our results revealed an unexpected adsorption scheme where the increase of the BLG/Mt weight ratio of the hybrid material leads to a partial exfoliation of the Mt, but at the expense of the protein native structure.

  • Chemi- vs physisorption in the radical functionalization of single-walled carbon nanotubes under microwaves

    Victor Mamane, Guillaume Mercier, Junidah Abdul Shukor, Jerome Gleize, Aziz Azizan, Yves Fort, Brigitte Vigolo
    Beilstein Journal of Nanotechnology, 2014, 5, pp.537-545. ⟨10.3762/bjnano.5.63⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    The effect of microwaves on the functionalization of single-walled carbon nanotubes (SWNTs) by the diazonium method was studied. The usage of a new approach led to the identification of the strength of the interaction (physical or chemical) between the functional groups and the carbon nanotube surface. Moreover, the nature (chemical formula) of the adsorbed/grafted functional groups was determined. According to thermogravimetric analysis coupled with mass spectrometry and Raman spectroscopy, the optimal functionalization level was reached after 5 min of reaction. Prolonged reaction times can lead to undesired reactions such as defunctionalization, solvent addition and polymerization of the grafted functions. The strength (chemi- vs physisorption) of the bonds between the grafted functional groups and the SWNTs is discussed showing the occurrence of physical adsorption as a consequence of defunctionalization after 15 min of reaction under microwaves. Several chemical mechanisms of grafting could be identified, and it was possible to distinguish conditions leading to the desired chemical grafting from those leading to undesired reactions such as physisorption and polymerization.

  • Contrasting diagenetic pathways of higher plant triterpenoids in buried wood as a function of tree species

    Gilles Schnell, Philippe Schaeffer, Hervé Tardivon, Estelle Motsch, Jacques Connan, Damien Ertlen, Dominique Schwartz, Nathalie Schneider, Pierre Adam
    Organic Geochemistry, 2014, 66, pp.107-124. ⟨10.1016/j.orggeochem.2013.11.001⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    Terpenoid biomarkers with high chemotaxonomic value, which can be used for the identification of an angiosperm input to sedimentary organic matter are desirable for studies devoted to the reconstitution of past environmental change. There is also a need, in the framework of archaeometric investigations, for reliable biomarkers to allow wood species determination from archaeological remains. In this context, we report the analysis of the triterpene content of buried wood and bark from oak, alder and birch, and comparison with that of the corresponding fresh material. Identification of new biomarkers led us to elucidate the diagenetic transformations undergone by triterpenoids in buried wood. A large set of triterpenoid biomarkers characterized by the presence of an oxygenated functionality in ring A at C-2 only could be exclusively evidenced in buried oak wood. An overall diagenetic pathway leading from the predominant polyfunctionalized triterpenoids in fresh oak wood (oxygenated functionalities at C-2/C-3/C-19/C-23/C-24/C-28) via numerous C-2 and C-2,C-3 functionalized intermediates to C-2 oxygenated aromatic triterpenoids is proposed. The evolution of the triterpenoid assemblage with respect to the level of diagenetic alteration could be followed. In contrast, the predominant triterpenoids in fresh alder and birch are common C-3 functionalized compounds. Their degradation follows the classical degradation/aromatization pathways reported for C-3 oxygenated triterpenes, ring A degradation appearing to represent only a minor process. In addition, the formation of phenolic triterpenoids, which have only been reported from brown coal, was observed.

  • Dinuclear Cu(I) complexes prepared from 2-diphenylphosphino-6-methylpyridine

    J. J. Cid, J. Mohanraj, M. Mohankumar, M. Holler, F. Monti, G. Accorsi, L. Karmazin-Brelot, I. Nierengarten, J. M. Malicka, M. Cocchi, B. Delavaux-Nicot, N. Armaroli, J.-F. Nierengarten
    Polyhedron, 2014, 82, pp.158-172. ⟨10.1016/j.poly.2014.06.009⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    A series of reactions have been performed by mixing 2-diphenylphosphino-6-methyl-pyridine (dpPyMe) and [Cu(CH3CN)4]BF4 in different molar ratios. Starting from equimolar quantities of dpPyMe and Cu+, a dinuclear Cu(I) complex with two P,N binucleating bridging ligands has been obtained. This compound is stable in the solid state, however ligand exchange reactions leading to a mixture of species have been evidenced in solution. By increasing the amount of dpPyMe, the reaction of dpPyMe and [Cu(CH3CN)4]BF4 afforded the dinuclear Cu(I) complex [Cu2(μ-dpPyMe)3(CH3CN)](BF4)2 in which the three bridging dpPyMe ligands are in a head-to-head arrangement. This compound is remarkably stable in solution. It has been also shown that the axial CH3CN ligand of [Cu2(μ-dpPyMe)3(CH3CN)](BF4)2 can be suitably exchanged with other nitrile ligands [benzonitrile, 4-(dimethylamino)-benzonitrile, 4-nitrobenzonitrile and bromoacetonitrile] but also with triphenylphosphine oxide. The electrochemical and photophysical properties of the resulting complexes have been systematically investigated. The [Cu2(μ-dpPyMe)3(L)](BF4)2 derivatives are weak emitters in solution but remarkable emission quantum yields (6 to 46%) have been found in rigid matrices at room temperature. One complex was utilized as active material for preliminary tests in LEC devices.

  • Reactions of trinuclear platinum clusters with electrophiles: ionisation isomerism with [Pt-3(mu(2)-I)-(mu-PPh2)(2)(PPh3)(3)]I and [Pt-3(mu-PPh2)(2)I-2(PPh3)(3)]. Structures of [Pt-3(mu(2)-Cl)(mu-PPh2)(2)(PPh3)(3)]PF6, Pt-3(mu-PPh2)(2)I-2(PPh3)(3)] and of the Pt-Ag cluster [Pt-3\mu(3)-AgBF4\(mu(2)-I)(mu(2)-PPh2)(2)(PPh3)(3)]BF4

    Christine Archambault, Robert Bender, Pierre Braunstein, Yves Dusausoy, Richard Welter
    Dalton Transactions, 2014, 43 (23), pp.8609-8619. ⟨10.1039/c4dt00090k⟩ | Publiée le 1 janvier 2014
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    A reaction of the 44 electron cluster [Pt-3(mu-PPh2)(3)Ph(PPh3)(2)] (1) with wet AgBF4 afforded the cationic cluster [Pt-3(mu(2)-OH)(mu-PPh2)(2)(PPh3)(3)]BF4 (3(BF4)) which slowly transformed into [Pt3(mu(2)-Cl)(mu-PPh2)(2)(PPh3)(3)] BF4 (4(BF4)) upon recrystallization from CH2Cl2. These 44 electron clusters have been characterized by P-31\H-1\ NMR, and the crystal structure of 4(PF6) has been determined by X-ray diffraction, as well as that of [Pt-3(mu-PPh2)(2)I-2(PPh3) (3)] (5), which was obtained by recrystallization of the known cluster [Pt-3(mu(2)-I)(mu-PPh2)(2)(PPh3)(3)] I (2(I)) from toluene and represents a neutral formula isomer of the latter. In addition, we have prepared the adducts of cluster 1 containing the moieties [Cu(NCMe)(2)](+) and [Au(PPh3)](+) in 6 and 7, respectively, and on the basis of their spectroscopic data, it was concluded that these complexes have similar structures to that previously established for the adduct of 1 with Ag(TFA) (TFA=OC(O)CF3), [Pt3\mu(3)-Ag(TFA)\(mu-PPh2)(3)Ph(PPh3)(2)] (8). The cationic clusters in 3(BF4) and 4(BF4) react with Ag(TFA) to afford cationic adducts in [Pt-3\mu(3)-Ag(TFA)\(mu(2)-X)(mu-PPh2) (2)(PPh3)(3)] BF4 (9(BF4), X=OH; 10(BF4), X=Cl). The structure of the mixed-metal cluster [Pt-3(mu(3)-AgBF4)(mu(2)-I)(mu-PPh2)(2)(PPh3)(3)] BF4 (11(BF4)), obtained by reaction of the complex 2(I) with AgBF4, was determined by X-ray diffraction.

  • Resorcinarenyl-Phosphines in Suzuki-Miyaura CrossCoupling Reactions of Aryl Chlorides

    Laure Monnereau, Hani El Moll, David Semeril, Dominique Matt, Loic Toupet
    European Journal of Inorganic Chemistry, 2014, 2014 (8), pp.1364-1372. ⟨10.1002/ejic.201301473⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    Two phosphines built on a bowl-shaped resorcin[4]arene skeleton, namely 5-diphenylphosphanyl- and 5-diisopropylphosphanyl-4(24),6(10),12(16),18(22)-tetramethylenedioxy-2, 8,14,20-tetrapentylresorcin[4]arene, have been synthesised and tested in the Suzuki-Miyaura cross-coupling reaction of aryl halides. Combining these ligands with [Pd(OAc)(2)] resulted in highly active catalysts that allowed the formation of o,o-biphenyls starting from aryl chlorides. The remarkable activities observed possibly arise from 1) the capacity of the phosphines to operate transiently as P,O chelators, thereby increasing the electron density of the metal, and 2) the ability of the ligands to embed metal-organic units, which, when occurring, makes the ligand considerably bulkier so as to disfavour the coordination of a second phosphine. Both features are known to facilitate the oxidative addition step.

  • Capping Methodology in Cyclodextrin Chemistry: Use of a Symmetrical Diketone Reagent for Regiospecific Installation of Unsymmetrical Imine- Enamine and Imidazole Caps

    Matthieu Jouffroy, Dominique Armspach, Alain Louati, Dominique Matt, Loic Toupet
    Chemistry - A European Journal, 2014, 20 (9), pp.2565-2573. ⟨10.1002/chem.201303556⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    Methylated - and -cyclodextrin skeletons were both equipped with an unsymmetrical N-(2-N-alkylaminoacenaphthenyl)alkylimine rigid handle. The capping reaction, which consists of condensing a diaminocyclodextrin with highly symmetrical acenaphthenequinone, was found to be regiospecific when starting from cyclodextrin-diamines without any symmetry element. All modified cyclooligosaccharides have intra-annular nitrogen donor atoms. They undergo further cyclization on oxidation, whether chemically with 2,3-dichloro-5,6-dicyano-1,4-benzoquinone or electrochemically, to give highly strained cyclodextrins capped with an unsymmetrical 1,2-disubstituted 1H-imidazole unit.

  • Crystal structure of trans-[1,3-bis(9-benzyl-9H-fluoren-9-yl) benzimidazol-2-ylidene] pyridine palladium(II) dichloride, C52H39Cl2N3Pd

    Matthieu Teci, Eric Brenner, Dominique Matt, Loic Toupet
    Zeitschrift für Kristallographie - New Crystal Structures, 2014, 229 (2), pp.169-171. ⟨10.1515/ncrs-2014-0059⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    C52H39Cl2N3Pd, tetragonal, I4(1)/a (no. 88), a = 40.0310(3) angstrom, c = 10.4211(1) angstrom, V = 16699.6 angstrom(3), Z = 16, R-gt(F) = 0.0292, wR(ref)(F-2) = 0.0709, T = 120 K.

  • Hydration gibbs free energies of open and closed shell trivalent lanthanide and actinide cations from polarizable molecular dynamics

    Aude Marjolin, Christophe Gourlaouen, Carine Clavaguéra, Pengyu Y. Ren, Jean-Philip Piquemal, Jean-Pierre Dognon
    Journal of Molecular Modeling, 2014, 20, pp.2471. ⟨10.1007/s00894-014-2471-6⟩ | Publiée le 1 janvier 2014
    Article dans une revue

    The hydration free energies, structures, and dynamics of open- and closed-shell trivalent lanthanide and actinide metal cations are studied using molecular dynamics simulations (MD) based on a polarizable force field. Parameters for the metal cations are derived from an ab initio bottom-up strategy. MD simulations of six cations solvated in bulk water are subsequently performed with the AMOEBA polarizable force field. The calculated first-and second shell hydration numbers,water residence times, and free energies of hydration are consistent with experimental/theoretical values leading to a predictive modeling of f-elements compounds.

  • Characterization of two quinone radicals in the NADH:ubiquinone oxidoreductase from Escherichia coli by a combined fluorescence spectroscopic and electrochemical approach

    Ruth Hielscher, Michelle Yegres, Mariana Voicescu, Emmanuel Gnandt, Thorsten Friedrich, Petra Hellwig
    Biochemistry, 2013, 52 (50), pp.8993-9000. ⟨10.1021/bi4009903⟩ | Publiée le 17 décembre 2013
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    The NADH:ubiquinone oxidoreductase (complex I) couples the transfer of electrons from NADH to ubiquinone with the translocation of protons across the membrane. It was proposed that the electron transfer involves quinoid groups localized at the end of the electron transfer chain. To identify these groups, fluorescence excitation and emission spectra of Escherichia coli complex I and its fragments, namely, the NADH dehydrogenase fragment containing the flavin mononucleotide and six iron-sulfur (Fe-S) clusters, and the quinone reductase fragment containing three Fe-S clusters were measured. Signals sensitive to reduction by either NADH or dithionite were detected within the complex and the quinone reductase fragment and attributed to the redox transition of protonated ubiquinone radicals. A fluorescence spectroscopic electrochemical redox titration revealed midpoint potentials of -37 and- 235 mV (vs the standard hydrogen electrode) for the redox transitions of the quinone radicals in complex I at pH 6 with an absorption around 325 nm and a fluorescence emission at 460/475 nm. The role of these cofactor(s) for electron transfer is discussed.

  • Cu(I)/Zn2+ exchange has no geometrical effect in a cyclic [4]rotaxane whereas it induces rearrangement in a simpler [3]rotaxane

    Valérie Heitz, Jean-Pierre Sauvage, Yann Trolez
    Inorganica Chimica Acta, 2013, pp.PagesAhead of Print. ⟨10.1016/j.ica.2013.12.010⟩ | Publiée le 16 décembre 2013
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    The dynamic behaviour of a [4]rotaxane consisting of two rigid bis-macrocycles and two linear fragments threading the rings, was compared to that of a simple model, namely a [3]rotaxane, consisting of roughly one half of the full [4]rotaxane molecule. Although the coordination sites are strictly identical in both compounds, it was observed that demetalation or metal exchange (CuI/Zn2+) has very limited effect on the [4]rotaxane geometry whereas the same reactions have a profound effect on the geometrical arrangement of the [3]rotaxane. This observation is a clear demonstration that the number of mechanical bonds is determining in terms of flexibility and rigidity, the more constrained [4]rotaxane being more difficult to distort than its smaller congener.

  • Characterization of cobalt phosphide nanoparticles derived from molecular clusters in mesoporous silica

    Paulin Buchwalter, Jacky Rose, Bénédicte Lebeau, Ovidiu Ersen, Maria Girleanu, Pierre Rabu, Pierre Braunstein, Jean-Louis Paillaud
    Journal of Nanoparticle Research, 2013, 15 (12), pp.1-21. ⟨10.1007/s11051-013-2132-1⟩ | Publiée le 30 novembre 2013
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    The synthesis of well dispersed cobalt phosphide nanoparticles (NPs) in SBA-15 mesoporous silica by wet impregnation of the molecular cluster [Co4(CO)10(μ-dppa)] (1) (dppa = HN(PPh2)2) is described. The thermal activation of the silica impregnated precursor under a H2/N2 (5/95 %) stream at different temperatures to form NPs was studied and it was found that the size of the latter is limited in the 5.5–6.5 nm range by the size of the pores. The obtained materials were characterized by various analytical methods. The porosity and the structure of the mesoporous silica supports were analyzed by N2 adsorption/desorption and small-angle X-ray diffraction. The nanoparticles were characterized by wide-angle X-ray diffraction, transmission electron microscopy in conventional and scanning modes, electron tomography, energy-dispersive X-ray spectroscopy, and magnetic measurements. Cobalt phosphide NPs of few nanometers were observed in the pores of SBA-15.

  • Hemichelation, a Way To Stabilize Electron-Unsaturated Complexes: The Case of T-Shaped Pd and Pt Metallacycles.

    Christophe Werlé, Corinne Bailly, Lydia Karmazin-Brelot, X. F Le Goff, Louis Ricard, Jean-Pierre Djukic
    Journal of the American Chemical Society, 2013, epub ahead of print. ⟨10.1021/ja4076327⟩ | Publiée le 14 novembre 2013
    Article dans une revue

    : A rational method of synthesis of stable neutral T-shaped 14 electron Pd and Pt complexes is proposed. It takes advantage of the ambiphilic character of the tricarbonyl(η(6)-indenyl)chromium anion, of which the main property is to behave as a hemichelating ligand, that is a nonconventional heteroditopic ligand capable of chelating a metal center by way of covalent and noncovalent bonding, thus preserving its unsaturated valence shell. The reaction of the in situ formed tricarbonyl(η(6)-2-methylindenyl)chromium anion with a series of Pd and Pt metallacycles afforded new air-stable and persistent synfacial heterobimetallic complexes in which the metallacycle binds the indenyl fragment via its metal in an η(1) fashion, leaving the fourth coordination site at the chelated metal virtually vacant. The structures of eight of these novel complexes are disclosed, and their bonding features are investigated by an array of theoretical methods based on the density functional theory (NBO, EDA, ETS-NOCV, AIM, NCI region analysis). Theory shows that the formation of these unusual structures of bimetallic synfacial η(1)-indenyl-Pd/Pt complexes is driven thermodynamically by attractive Coulombic occlusion of the fourth vacant coordination site at Pd/Pt centers by the Cr(CO)3 moiety.

  • Pseudo-capsular behaviour of two trans-coordinated calixarenyl phosphines

    Laure Monnereau, David Semeril, Dominique Matt, Loïc Toupet
    Transition Metal Chemistry, 2013, 38 (8), pp.821-825. ⟨10.1007/s11243-013-9754-0⟩ | Publiée le 1 novembre 2013
    Article dans une revue

    The square-planar complex trans-[PtCl2L2] (L = 5-diphenylphosphinyl-25,26,27,28-tetrabenzyloxy-calix[4]arene) was prepared in two steps from [PtCl2(cod)] (cod = 1,5-cyclooctadiene) and the corresponding phosphine. In the solid state, the calixarene moieties adopt a typical pinched cone conformation; they are both turned towards the Cl-Pt-Cl rod, thereby forming a capsule that hosts the platinum centre.

  • Porphyrins Fused to N-Heterocyclic Carbenes (NHCs): Modulation of the Electronic and Catalytic Properties of NHCs by the Central Metal of the Porphyrin

    Jean-François Lefebvre, Mamadou Lo, Jean-Paul Gisselbrecht, Olivier Coulembier, Sébastien Clément, Sébastien Richeter
    Chemistry - A European Journal, 2013, 19, pp.15652. ⟨10.1002/chem.201301483⟩ | Publiée le 7 octobre 2013
    Article dans une revue

    We report herein a detailed study of the use of porphyrins fused to imidazolium salts as precursors of N-heterocyclic carbene ligands 1M. Rhodium(I) complexes 6M-9M were prepared by using 1M ligands with different metal cations in the inner core of the porphyrin (M= NiII, ZnII, MnIII, AlIII, 2H). The electronic properties of the corresponding N-heterocyclic carbene ligands were investigated by monitoring the spectroscopic changes occurring in the cod and CO ancillary ligands of [(1M)Rh(cod)Cl] and [(1M)Rh(CO)2Cl] complexes (cod= 1,5-cyclooctadiene). Porphyrin-NHC ligands 1M with a trivalent metal cation such as MnIII and AlIII are overall poorer electron donors than porphyrin-NHC ligands with no metal cation or incorporating a divalent metal cation such as NiII and ZnII. Imidazolium salts 3M (M=Ni, Zn, Mn, 2H) have also been used as NHC precursors to catalyze the ring-opening polymerization of l-lactide. The results clearly show that the inner metal of the porphyrin has an important effect on the reactivity of the outer carbene.

  • Use of Cleavable Coordinating Rings as Protective Groups in the Synthesis of a Rotaxane with an Axis that Incorporates More Chelating Groups Than Threaded Macrocycles

    Antoine Joosten, Yann Trolez, Valérie Heitz, Jean-Pierre Sauvage
    Chemistry - A European Journal, 2013, 19 (38), pp.12815-12823. ⟨10.1002/chem.201301717⟩ | Publiée le 16 septembre 2013
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    A new methodology allowing preparation of a linear “unsaturated” [3]rotaxane consisting of an axis incorporating more coordination sites than threaded rings was developed. It was based on the preliminary synthesis of a “saturated” [5]rotaxane consisting of a four‐chelating site axis threaded through four macrocyclic components, two of them being cleavable rings incorporating a lactone function and the two others being “secure” non‐cleavable rings. The stoppering reaction was based on click chemistry. Subsequently, cleavage and removal of the two lactone‐containing macrocycles from the [5]rotaxane in basic medium afforded the desired “unsaturated” [3]rotaxane in quantitative yield.

  • First molecular identification of a hafting adhesive in the Late Howiesons Poort at Diepkloof Rock Shelter (Western Cape, South Africa)

    Armelle Charrié-Duhaut, Guillaume E Porraz, Caroline Cartwright, Marina Igreja, Jacques Connan, Cedric Poggenpoel, Pierre-Jean Texier
    Journal of Archaeological Science, 2013, 40 (9), pp.3506-3518. ⟨10.1016/j.jas.2012.12.026⟩ | Publiée le 1 septembre 2013
    Article dans une revue

    The hafting of tools using adhesive is one of the innovative features that characterizes the southern African Middle Stone Age. This technology has mainstream implications but remains insufficiently documented, largely due to unequal organic preservation and non-adapted analytical procedures. A notable exception is provided by the recent results from the site of Sibudu (Lombard, 2006;Wadley et al., 2009). The excavation at Diepkloof Rock Shelter has revealed several lithic artifacts with a black residue distributed over their surface. Their stratigraphic distribution reveals a strict association with the Howiesons Poort (HP) and suggests a close relationship between the appearance of hafting adhesive and the appearance of blades and geometric backed tools. Macroscopic and microscopic observations attest to a hafting that was exclusively lateralized and preliminary use-wear analysis (Igreja and Porraz, 2013) supports the hypothesis that hafted tools were mostly integrated within daily (domestic) activities. In this study, we focused specifically on a chemical study of a thick black residue found on a quartz flake attributable to the Late phase of the HP. We determine, for the first time in a MSA context, the nature of the compound adhesive and reconstruct a picture of the multilevel operations and interactions that comprise the process of hafting. The molecular analysis attests to the exploitation of Podocarpus elongatus (Yellowwood), collected in the form of a resin that was naturally dried or heated at a low temperature and possibly mixed with fragmented bone and quartz grains. Compared to Sibudu where ochre additive is documented, the hafting technology at Diepkloof introduces another level of variability within the HP tradition and suggests the existence of regional expressions and adaptations.

  • Heteroleptic diimine copper(i) complexes with large extinction coefficients: synthesis, quantum chemistry calculations and physico-chemical properties.

    Martina Sandroni, Megumi Kayanuma, Mateusz Rebarz, Huriye Akdas-Kilig, Yann Pellegrin, Errol Blart, Hubert Le Bozec, Chantal Daniel, Fabrice Odobel
    Dalton Transactions, 2013, 42 (40), pp.14628-14638. ⟨10.1039/c3dt51288f⟩ | Publiée le 28 août 2013
    Article dans une revue

    : Using the HETPHEN approach, five new heteroleptic copper(i) complexes composed of a push-pull 4,4'-styryl-6,6'-dimethyl-2,2'-bipyridine ligand and a bulky bis[(2-diphenylphosphino)phenyl]-ether (DPEphos) or a bis2,9-mesityl phenanthroline (Mes2Phen) were prepared and characterized by electronic absorption spectroscopy, electrochemistry, and TD-DFT calculations. These complexes exhibit very intense absorption bands in the visible region with extinction coefficient in the range of 5-7 × 10(4) M(-1) cm(-1). The analysis of the position, intensity and band shape indicates a strong contribution from an intra-ligand charge-transfer transition centered on the styrylbipyridine ligand along with MLCT transitions. These new complexes experimentally demonstrate that good light harvesting properties with bis-diimine copper(i) complexes are a reality if one chooses suitable ligands in the coordination sphere. This constitutes a milestone towards using bis-diimine copper(i) complexes for solar energy conversion (artificial photosynthesis and solar cells).

  • Molecular Evidence of Bitumen in the Mousterian Lithic Assemblage of Hummal (Central Syria)

    Thomas C. Hauck, Jacques Connan, Armelle Charrié-Duhaut, Jean-Marie Le Tensorer, Heba Al Sakhel
    Journal of Archaeological Science, 2013, 40 (8), pp.3252-3262. ⟨10.1016/j.jas.2013.03.022⟩ | Publiée le 1 août 2013
    Article dans une revue

    Evidence for bitumen use in Middle Palaeolithic sites is an exception in Pleistocene archaeology. This paper presents the discovery of three tar-bearing Levallois artefacts found in the Mousterian sequence in Hummal (Central Syria). The organic residues were submitted to geochemical study. Gas chromatography–mass spectrometry analyses of saturated and aromatic hydrocarbons and isotopic data show the presence of bitumen. The most likely location of natural asphalt provisioning is the Shaaf outcrop in the Bichri desert. The bitumen-bearing stone tools add further important data to the growing knowledge about bitumen processing in the Middle Palaeolithic spring sites of El Kowm. Identification of the provisioning place for natural asphalt enables a more precise assumption about the site's catchment area. From a technological point of view, the tar-bearing specimens provide information on the range of tool forms selected for hafting. Ballistic features arguably indicate that the pointed Levallois blanks seem to be spear points that were fitted to a wooden handle. In at least one case, this technical procedure was seemingly executed during a brief episode of occupation and replacement of worn out implements. This small, bracketed window of detailed insight into Mousterian technology is linked with the more general relationship between Levallois technology and stone tool hafting.

  • Do π-π stacking interactions really play a role in the magnetic coupling mechanisms of [Cu2(μ2-CH3COO)2L2(H2O)2]n+ (L = heterocyclic base, n = 0, 2) complexes? An ab initio inspection.

    Nuno A.G. Bandeira, Daniel Maynau, Vincent Robert, Boris Le Guennic
    Inorganic Chemistry, 2013, 52 (14), pp.7980-7986. ⟨10.1021/ic400517z⟩ | Publiée le 15 juillet 2013
    Article dans une revue

    The magnetic properties of two bis-acetate binuclear copper(II) complexes, namely [Cu2(μ2-CH3COO)2(bpydiol-H)2(H2O)2] (bpydiol-H = mono deprotonated 2,2'-bipyridine-3,3'-diol) and [Cu2(μ2-CH3COO)2(phen)2(H2O)2](2+) (phen = 1,10-phenantroline), is revisited using ab initio wave function-based calculations (CASSCF, DDCI). Thanks to an analysis of the magnetic exchange coupling based on localized orbitals, it is shown that, unlike stated in the original work [C. Hou et al. Dalton Trans. 2008, 5970], π-π interactions do not contribute to the overall antiferromagnetism character of these complexes.

  • Hydramacin-1 in Action: Scrutinizing the Barnacle Model

    Matthias Michalek, Bruno Vincent, Rainer Podschun, Joachim Grötzinger, Burkhard Bechinger, Sascha Jung
    Antimicrobial Agents and Chemotherapy, 2013, 57 (7), pp.2955-2966. ⟨10.1128/AAC.02498-12⟩ | Publiée le 1 juillet 2013
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    ABSTRACT Hydramacin-1 (HM1) from the metazoan Hydra exerts antimicrobial activity against a wide range of bacterial strains. Notably, HM1 induces the aggregation of bacterial cells, accompanied by precipitation. To date, the proposed mechanism of peptide-lipid interaction, termed the barnacle model, has not been described on the molecular level. Here, we show by biochemical and biophysical techniques that the lipid-peptide interactions of HM1 are initiated by electrostatic and hydrophobic effects, in particular, by tryptophan and neighboring polar amino acid residues that cause an interfacial localization of the peptide between two self-contained lipid bilayers. The high binding constants of HM1 upon lipid interaction are in the range of other potent antimicrobial peptides, e.g., magainin, and can be reasonably explained by two distinct epitopes on the surface of the peptide's global structure, which both contain SWT(K/R) motifs. The residues of this motif favor localization of the peptide in the head group region of phospholipid bilayers up to a penetration depth of 4 Å and a minor participation of the lipids' hydrocarbon regions. Our results expand the knowledge about the molecular modes of action antimicrobial peptides use to tackle their target cells. Furthermore, the aggregation of living bacteria by HM1 was observed for a broad range of Gram-positive and Gram-negative bacteria. Therefore, the detailed view of peptide-lipid interactions described by the barnacle model consolidates it among the established models.

  • Subtle Steric Effects in Nickel-Catalysed Kumada-Tamao-Corriu Cross-Coupling Using Resorcinarenyl-Imidazolium Salts

    Neslihan Sahin, David Semeril, Eric Brenner, Dominique Matt, Ismail Ozdemir, Cemal Kaya, Loïc Toupet
    European Journal of Organic Chemistry, 2013, 2013 (20), pp.4443-4449. ⟨10.1002/ejoc.201300347⟩ | Publiée le 1 juillet 2013
    Article dans une revue

    Three resorcinarene-cavitands bearing a 3-R-1-imidazolylium substituent (R = alkyl) grafted to the wider rim of the cavitand (1-3) were assessed in the Kumada-Tamao-Corriu cross-coupling of aryl halides with arylmagnesium halides. Their combination with [Ni(cod)2] (cod = 1,5-cyclooctadiene; 1:1 stoichiometry) resulted in highly efficient catalysts, the activities of which varied in the following order: R = n-propyl (1) < isopropyl (2) ≈ benzyl (3). A remarkable turnover frequency of 60400 mol(ArX) mol(Ni)-1 h-1 was obtained in the coupling of 2-bromo-6-methoxynaphthalene with PhMgBr (100 °C in dioxane, with precursor 2). The high activities of the cavitand derivatives were attributed to steric effects that facilitate the reductive-elimination/product decoordination step. Comparative experiments carried out with a structurally modified resorcinarene, as well as cavity-free imidazolium salts bearing 2-methoxyaryl substituents, suggest that the efficiency of the catalysts mainly relies on steric interactions between the metal and the flexible substituents attached to two methine carbon atoms. These steric interactions are probably reinforced each time the metal binds one of the two oxygen atoms located next to the catalytic centre.

  • N-Heterocyclic Carbenes Functioning as Monoligating Clamps

    Matthieu Teci, Eric Brenner, Dominique Matt, Loïc Toupet
    European Journal of Inorganic Chemistry, 2013, 2013 (16), pp.2841-2848. ⟨10.1002/ejic.201300087⟩ | Publiée le 1 juin 2013
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    Benzimidazolium salts N,N′-disubstituted with 9-alkylfluorenyl groups (3a-e, alkyl = methyl, ethyl, propyl, butyl, benzyl) have been synthesised in high yields in three steps from o-phenylenediamine. This amine was treated with fluorenone in the presence of TiCl4 and tetramethylethylenediamine (TMEDA) to form N,N′-bis(9H-fluoren-9-ylidene)benzene-1,2-diamine (1) in 91 % yield. Diamines 2a-e were then obtained in yields superior or equal to 77 % by reacting diimine 1 with the appropriate organolithium reagent. In the final step, diamines 2a-e were treated with ethylorthoformate under acidic conditions to afford benzimidazolium salts 3a-e. These were readily converted into the PEPPSI palladium complexes 4a-e (PEPPSI = pyridine-enhanced precatalyst preparation stabilisation and initiation). NMR and X-ray diffraction studies revealed that the flat fluorenylidene moiety orientates the alkyl groups towards the metal centre and because of its restricted rotational freedom makes the ligand bulkiness time independent. Thus, the metal centre is permanently confined between the two alkyl groups, and thereby forms a monoligating clamp with the carbenic centre. The CH2 groups close to the palladium ion give rise to anagostic C-H***Pd interactions. Catalytic tests revealed that the palladium complexes 4a-e are highly efficient in Suzuki-Miyaura cross-coupling reactions; their activity is equal or superior to the best PEPPSI catalysts reported to date.

  • Chelating properties of permethylated 6(A),6(D)-dideoxy-6(A),6(D)-bis(1-imidazolyl)cyclodextrins towards Pt(II) and Ru(III)

    Coraline Egloff, Rafael Gramage-Doria, Matthieu Jouffroy, Dominique Armspach, Dominique Matt, Loïc Toupet
    Comptes Rendus. Chimie, 2013, 16 (6), pp.509-514. ⟨10.1016/j.crci.2012.08.008⟩ | Publiée le 1 juin 2013
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    Two imidazole-coordinating groups have been successfully grafted onto the C-6A and C-6D positions of permethylated α- and β-cyclodextrin scaffolds. Both water-soluble ligands L1 and L2 turned out to behave as good chelators when reacted with K2PtCl4. In the resulting diamagnetic cis-chelate complexes, the metal cation is pending above the cavity entrance. Paramagnetic ruthenium(III) chelate complexes have also been successfully synthesised from L1 and L2. In these more sterically demanding octahedral complexes, the imidazole groups coordinate the metal centre in a trans-fashion.

  • Gallium and indium complexes for ring-opening polymerization of cyclic ethers, esters and carbonates

    Samuel Dagorne, Mickaël Normand, Evgeny Kirillov, Jean-François Carpentier
    Coordination Chemistry Reviews, 2013, 257 (11-12), pp.1869-1886. ⟨10.1016/j.ccr.2013.02.012⟩ | Publiée le 1 juin 2013
    Article dans une revue

    Over the past five years, Ga(III) and most notably In(III) precursors have attracted a growing interest for application in ROP catalysis of cyclic esters, primarily lactide, and may now be considered as potentially efficient ROP initiators of cyclic esters/carbonates. Despite their higher cost (vs. Al), Ga and In derivatives exhibit key attractive features including: (i) Ga(III) and In(III) are biocompatible metal centers and (ii) their precursors are typically more stable than organoaluminum species in polar media. The present contribution reviews discrete Ga(III) and In(III) compounds thus far developed as ROP initiators of cyclic esters/carbonates. The very few reports on Ga(III)-mediated ROPs of cyclic ethers are also included. In addition to the ROP performances of such species, the synthesis and structural characterization of these initiators are also provided and thoroughly discussed with, whenever appropriate, the establishment of structure/reactivity relationships and mechanistic pathways.

  • Impact of short and long-range effects on the magnetic interactions in neutral organic radical-based materials.

    Alex Domingo, Martin Vérot, Fernando Mota, Coen de Graaf, Juan J Novoa, Vincent Robert
    Physical Chemistry Chemical Physics, 2013, 15 (18), pp.6982-9. ⟨10.1039/C3CP44647F⟩ | Publiée le 14 mai 2013
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    The mutual influence of electronic structure and environment of the constituent units of neutral organic radical-based materials (radical dimers) is analysed by means of wave function calculations (Difference Dedicated Configuration Interaction, DDCI). Focus is put on the magnetic property modulations of two classes of neutral organic materials by inspecting both short- and long-range effects. The exchange coupling constant J for the high-temperature phase of the 1,3,5-trithia-2,4,6-triazapentalenyl (TTTA) material is calculated to be J= -95 cm(-1) at the DDCI level. The environmental electronic polarization is taken into account self-consistently using the individual polarizabilities of the atoms in a finite block of the crystal lattice (Discrete Reaction Field, DRF) and accounts for less than 5% of the calculated J value in TTTA. Furthermore, taking advantage of the chemical flexibility of the verdazyl radical family, the contribution of strong electron-withdrawing groups is analysed by extracting the J, U, t and K parameters from pairs of substituted verdazyl-based radicals. Our ab initio calculations of verdazyl radical pairs suggest that the addition of NO2 groups cause (i) the variations of the ferromagnetic and antiferromagnetic contributions to cancel out, leaving an almost constant exchange coupling constant, ca. J≈ 20 cm(-1), and that (ii) enhanced conduction properties can be anticipated. In contrast to inorganic analogues, one may conclude that the magnetic behaviour of neutral organic radical-based materials is mostly governed by the supramolecular arrangement, whereas environmental effects have a lesser impact.

  • Regioselective di- and tetra-functionalisation of γ-cyclodextrin using capping methodology.

    Matthieu Jouffroy, Dominique Armspach, Dominique Matt, Loïc Toupet
    Organic & Biomolecular Chemistry, 2013, 11 (22), pp.3699-705. ⟨10.1039/c3ob40234g⟩ | Publiée le 14 mai 2013
    Article dans une revue

    Alkylation of γ-cyclodextrin with 3 equiv. of 1,3-bis[bis(4-tert-butylphenyl)chloromethyl]benzene, followed by permethylation afforded selectively a singly capped (A,B), as well as two doubly capped (A,B:D,E and A,B:E,F) methylated γ-CDs. Deprotection with HBF4 gave quantitatively the corresponding diols and tetrols, which constitute valuable starting compounds for further functionalisation.

  • Resorcinarene-Functionalised Imidazolium Salts as Ligand Precursors for Palladium-Catalysed Suzuki-Miyaura Cross-Couplings.

    Neslihan Sahin, David Semeril, Eric Brenner, Dominique Matt, Ismail Ozdemir, Cemal Kaya, Loïc Toupet
    ChemCatChem, 2013, 5 (5), pp.1116-1125. ⟨10.1002/cctc.201200716⟩ | Publiée le 1 mai 2013
    Article dans une revue

    Three imidazolium salts based on a rigid resorcinarene platform (1-3) were synthesised and used as catalyst precursors in the Suzuki-Miyaura cross-coupling of aryl halides with phenylboronic acid. In these pro-carbene ligands, the heterocyclic moiety has one N atom connected to a C2 atom of a resorcinolic ring, and the other is substituted by an alkyl group (R=n-propyl, iso-propyl, benzyl). The methinic C atoms of the macrocyclic core are all substituted by a pentyl group. The best catalytic performances were obtained by using an imidazolium/Pd ratio of 1:1. The catalytic systems displayed high activities, which increased in the order R=n-propyl (1)

  • Macrocyclic Effects in the Mesomorphic Properties of Liquid‐Crystalline Pillar[5]‐ and Pillar[6]arenes

    Iwona Nierengarten, Sebastiano Guerra, Michel Holler, Lydia Karmazin-Brelot, Joaquín Barberá, Robert Deschenaux, Jean‐françois Nierengarten
    European Journal of Organic Chemistry, 2013, 2013 (18), pp.3675-3684. ⟨10.1002/ejoc.201300356⟩ | Publiée le 29 avril 2013
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    Abstract Whereas the reaction of 1,4‐bis(2‐bromoethyloxy)benzene ( 4 ) with paraformaldehyde in the presence of BF 3 · Et 2 O afforded exclusively the cyclopentameric pillar[5]arene derivative ( 5 ), both cyclopenta‐ and cyclohexameric macrocycles 5 and 6 were obtained when the reaction of 4 with paraformaldehyde was performed at 45 °C in CHCl 3 with FeCl 3 as the catalyst. Treatment of compounds 4 – 6 with sodium azide provided the corresponding polyazides, to which a cyanobiphenyl building block was subsequently grafted to generate model compound 1 , pillar[5]arene 2 , and pillar[6]arene 3 , bearing two, ten and twelve mesomorphic subunits, respectively. The liquid‐crystalline and thermal properties of the compounds were investigated by polarized optical microscopy (POM), differential scanning calorimetry (DSC), and X‐ray diffraction (XRD). Comparison of the liquid‐crystalline properties of macrocycles 2 and 3 with those of 1 revealed the strong influence of the macrocyclic pillar[ n ]arene core on the mesomorphic properties. Whereas only a monotropic mesophase was observed for 1 , a broad enantiotropic mesophase was evidenced for both pillar[ n ]arene derivatives.

  • Interactions between Keggin Anions in Water: The Higher Their Charge, the Higher Their Condensation? A Simulation Study

    Alain Chaumont, Georges Wipff
    European Journal of Inorganic Chemistry, 2013, 2013 (10-11), pp.1556-1556. ⟨10.1002/ejic.201300146⟩ | Publiée le 26 mars 2013
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    Abstract Invited for the front cover of the Cluster Issue on Polyoxometalates is the group of Georges Wipff at the University of Strasbourg. The cover image shows the interaction of POMs with various components of the solution and their adsorption at the interface.

  • Tetra-hydroxy-calix[4]arene derivatives with two P(III) or P(V) units attached at the upper rim.

    Laure Monnereau, David Semeril, Dominique Matt, Loïc Toupet
    Polyhedron, 2013, 51, pp.70-74. ⟨10.1016/j.poly.2012.11.040⟩ | Publiée le 4 mars 2013
    Article dans une revue

    5,17-Bis(diphenylphosphino)-25,26,27,28-tetra-hydroxy-calix[4]arene (2) and the corresponding bis- (phosphine oxide) (3) and bis-(phosphine sulfide) (4) have been synthesized. A single crystal X-ray diffraction study was carried out for bis(phosphine oxide) 3, which revealed a pinched cone conformation for the calixarene core. In the solid state, each calixarene is linked to two other calixarenes via hydrogen bonds involving the phosphoryl groups as well as two of the four hydroxyl groups, thereby generating a supramolecular polymeric structure. Selective formation of chelate complexes from diphosphine 2 failed, probably because of rapid trans annular rotation of the phenoxyl groups that prevents appropriate ligand preorganisation. Upon reaction with appropriate Ru-, Rh-, and Ir-complexes, ligand 2 readily formed dinuclear complexes. One of them, namely the complex [2 {RhCl(1,5-cyclooctadiene)}2] was assessed in the catalytic hydrogenation of linear and cyclic olefins.

  • Crystal structure and functional mechanism of a human antimicrobial membrane channel

    Chen Song, Conrad Weichbrodt, Evgeny Salnikov, Marek Dynowski, Björn Forsberg, Burkhard Bechinger, Claudia Steinem, Bert L. de Groot, Ulrich Zachariae, Kornelius Zeth
    Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (12), pp.4586-4591. ⟨10.1073/pnas.1214739110⟩ | Publiée le 20 février 2013
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    Multicellular organisms fight bacterial and fungal infections by producing peptide-derived broad-spectrum antibiotics. These host-defense peptides compromise the integrity of microbial cell membranes and thus evade pathways by which bacteria develop rapid antibiotic resistance. Although more than 1,700 host-defense peptides have been identified, the structural and mechanistic basis of their action remains speculative. This impedes the desired rational development of these agents into next-generation antibiotics. We present the X-ray crystal structure as well as solid-state NMR spectroscopy, electrophysiology, and MD simulations of human dermcidin in membranes that reveal the antibiotic mechanism of this major human antimicrobial, found to suppress Staphylococcus aureus growth on the epidermal surface. Dermcidin forms an architecture of high-conductance transmembrane channels, composed of zinc-connected trimers of antiparallel helix pairs. Molecular dynamics simulations elucidate the unusual membrane permeation pathway for ions and show adjustment of the pore to various membranes. Our study unravels the comprehensive mechanism for the membrane-disruptive action of this mammalian host-defense peptide at atomistic level. The results may form a foundation for the structure-based design of peptide antibiotics.

  • NMR HRMAS spectroscopy of lung biopsy samples: Comparison study between human, pig, rat, and mouse metabolomics

    Malika Benahmed, Karim Elbayed, François Daubeuf, Nicola Santelmo, Nelly Frossard, Izzie Namer
    Magnetic Resonance in Medicine, 2013, 71 (1), pp.35-43. ⟨10.1002/mrm.24658⟩ | Publiée le 14 février 2013
    Article dans une revue

    Purpose Using the metabolomics by NMR high‐resolution magic angle spinning spectroscopy, we assessed the lung metabolome of various animal species in order to identify the animal model that could be substituted to human lung in studies on fresh lung biopsies. Methods The experiments were conducted on intact lung biopsy samples of pig, rat, mouse, and human using a Bruker Advance III 500 spectrometer. Thirty‐five to 39 metabolites were identified and 23 metabolites were quantified. Principal component analysis, partial least‐squares discriminant analysis, and analysis of variance tests were performed in order to compare the metabolic profiles of each animal lung biopsies to those of the human lung. Results The metabolic composition between human and pig lung was similar. However, human lung was distinguishable from mouse and rat regarding: Trimethylamine N ‐oxide and betaïne which were present in rodents but not in human lung, carnitine, and glycerophosphocholine which were present in mouse but not in human lung. Conversely, succinic acid was undetected in rat lung. Furthermore, fatty acids concentration was significantly higher in rodent lungs compared to human lung. Conclusion Using the metabolomics by NMR high‐resolution magic angle spinning spectroscopy on lung biopsy, samples allowed to highlight that pig lung seems to be close to human lung as regarding its metabolite composition with more similarities than dissimilarities. Magn Reson Med 71:35–43, 2014. © 2013 Wiley Periodicals, Inc.

  • Electron-deficient η1-Indenyl,η3-allylpalladium(II) complexes stabilized by fluxional non-covalent interactions.

    Christophe Werlé, Mustapha Hamdaoui, Corinne Bailly, X. F Le Goff, Lydia Brelot, Jean-Pierre Djukic
    Journal of the American Chemical Society, 2013, 135 (5), pp.1715-8. ⟨10.1021/ja312003q⟩ | Publiée le 6 février 2013
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    Highly fluxional, solution-persistent, and formally electron-deficient (32e(-)) binuclear Pd(II)-C(0) complexes of 2-methyl-1H-indene were synthesized and structurally characterized by X-ray diffraction analysis. DFT investigations combined with a number of theoretical analyses of the bond framework suggest that the polar intermetallic interaction possesses no major covalent character. Instead of bearing a static metal-metal bond as suggested by structural X-ray diffraction analysis, the complexes display in solution significant fluxionality through haptotropy, i.e., a formal "oscillation" of the Pd(η(3)-allyl) moiety between two limiting η(1)-indenyl configurations.

  • Thermodynamics and Mechanism of Action of a Series of Organoruthenium Anticancer Reagents

    Moussa Ali, Bastien Boff, Jean-Thomas Issenhuth, Anne Boos, Noëlle Potier, Sebastien Harlepp, Jean-Philippe Loeffler, Claude Sirlin
    International Journal of Advance in Medical Science, 2013, 1 (4), pp.45-48 | Publiée le 1 janvier 2013
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    Antiproliferative effects on HCT-116 and U-87 cells by a series of organoruthenium complexes have been determined. Redox properties have been measured as well. The highlighted binomial relationship between the biological activity and the oxidation potentials was interpreted as two competitive reactions of oxidation and reduction of the metallic centre. The oxidation of Ru (II) in Ru (III) complexes presumably by oxygen has been observed by UV-vis spectrophotometry and mass spectrometry. The reduction ofRu (III) in Ru (II) complexes is performed by reducing compounds from the cell (observed with glucose).

  • Windowsill Hydrogen Production under Daylight Irradiation

    Bertrand Vileno, Philippe Turek, Jean Weiss, David Martel
    ChemPlusChem, 2013 | Publiée le 1 janvier 2013
    Article dans une revue

    Hydrogen can be produced on a windowsill under daylight irradiation of TiO 2-supported platinum by using a self-buffered electron-donor solution that optimizes the interfacial processes.

  • The MSA sequence of Diepkloof and the history of southern African Late Pleistocene populations.

    Guillaume Porraz, John Parkington, Jean-Philippe Rigaud, Christopher E. Miller, Cedric Poggenpoel, Chantal Tribolo, Will Archer, Caroline R. Cartwright, Armelle Charrié-Duhaut, Laure Dayet, Marina Igreja, Norbert Mercier, Patrick Schmidt, Christine Verna, Pierre-Jean Texier
    Journal of Archaeological Science, 2013, 40 (9), pp.3542-3552. ⟨10.1016/j.jas.2013.02.024⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    This paper presents the first multidisciplinary synthesis of the Middle Stone Age sequence of Diepkloof Rock Shelter (South Africa). We explore the main cultural changes that characterized southern African hunter-gatherer societies from OIS 5 to the beginning of OIS 3. We discuss the tempo of these changes, test the current interpretative hypotheses and explore an empirical model to explain the early appearance of symbolic marking within the Pleistocene hunter-gather societies of southern Africa. Major technological and cultural innovations appear in one form or another during OIS 5 in southern Africa, a period characterized by the coexistence of multiple, distinct technological traditions. We argue that the formation of regional identities in southern Africa would have favoured and increased cultural interactions between groups at a local scale, providing a favourable context for the development and diffusion of innovations. In the West Coast of South Africa, the main cultural innovations appear within the Howiesons Poort. It is within this context that we postulate a change in regional networks and population dynamics, leading to the success of the HP technology across southern Africa. The southern African data suggest that the history of modern humans has been characterized by multiple and independent evolutionary trajectories and that different paths and scenarios existed towards the adoption of 'modern' hunter-gatherer lifestyles.

  • Porphyrin-polyoxometalate hybrids connected via a Tris-alkoxo linker for thegeneration of photocurrent

    Iftikhar Ahmed, Rana Farha, Zhaohui Huo, Clémence Allain, Xiaoxia Wang, Hualong Xu, M. Goldmann, Bernold Hasenknopf, Laurent Ruhlmann
    Electrochimica Acta, 2013, 110, pp.726-734. ⟨10.1016/j.electacta.2013.02.045⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Films on ITO of [N(C4H9)4]5H[P2V3W15O59{(OCH2)3CNHCO(ZnTPP)}] (ZnTPP = zinc(II)-tetraphenyl-porphyrin) were obtained by the Langmuir-Schaefer inverted transfer method.The films were characterized by UV-vis absorption spectroscopy, XPS, AFM, and electrochemistry. Inaddition, the photovoltaic performances of the Langmuir-Schaefer films were investigated by photo-current transient measurements, which show significant photocurrent response.

  • Metallated cavitands (calixarenes, resorcinarenes, cyclodextrins) with internal coordination sites

    Rafael Gramage-Doria, Dominique Armspach, Dominique Matt
    Coordination Chemistry Reviews, 2013, 257 (3-4), pp.776-816. ⟨10.1016/j.ccr.2012.10.006⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Although quite common in nature, notably in metalloenzymes, the coordination of transition metals within a confined three dimensional environment has long been hampered by the lack of molecular receptors that may force ligand binding to take place internally. However, an increasing number of appropriate cavity-shaped molecules has become available over the years. Their modification with donor atoms has led to metalloreceptors that can not only bind substrates inside a well-defined hollow space, but which can also promote transformations of the confined guests. This article gives an overview of transition metal complexes capable of directing the binding of exogeneous ligands inside a molecular cavity. Special emphasis is placed on the stabilisation of unusual coordination modes and geometries as well as the role of the cavity in catalysis and metal-assisted molecular recognition.

  • Neutral and Cationic N-Heterocyclic Carbene Zirconium and Hafnium Benzyl Complexes: Highly Regioselective Oligomerization of 1-Hexene with a Preference for Trimer Formation

    Samuel Dagorne, Stéphane Bellemin-Laponnaz, Charles Romain
    Organometallics, 2013, 32 (9), pp.2736-2743. ⟨10.1021/om400182d⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Various zirconium and hafnium amido, chloro, and benzyl complexes supported by a tridentate N-heterocyclic carbene bis-phenolate dianionic ligand ((OCO)(2-)) have been synthesized and structurally characterized. The alcohol elimination reaction of the protio ligand N,N'-bis(2-hydroxy-3,5-di-tert-butylphenyl)-4,5-dihydroimidazolium chloride (1) and the metal alkoxide precursors M((OPr)-Pr-i)(4)((HOPr)-Pr-i) (M = Zr, Hf) and a subsequent alkoxide/chloride exchange reaction (upon addition of trimethylsilyl chloride, TMSCl) afforded the corresponding Zr and Hf carbene dichloro complexes as THF adducts: (OCO)MCl2(THF) (2a-THF, M = Zr; 2b-THF, M = Hf). As determined by single-crystal X-ray crystallographic studies, the molecular structure of the Hf derivative 2b-THF confirmed the proposed formulation and the effective formation of a (OCO)Hf chelate. In the case of Zr, an amine elimination reaction between protio ligand 1 and Zr(NMe2)(4) yielded the corresponding Zr amido THF adduct (OCO)Zr(NMe2)(Cl)(THF) (3a-THF) when carried in THF as a solvent, while the Zr-NHMe2 adduct (OCO)Zr(NMe2)(NHMe2)(THF) (3a-NHMe2) was isolated using CH2Cl2 as the reaction solvent. 3a-THF may be readily and quantitatively converted to the dichloro derivative 2a-THF upon addition of TMSCl. The toluene elimination reaction of protio ligand 1 and M(CH2Ph)(4) (M = Zr, Hf) followed by a salt metathesis with 1 equiv of PhCH2MgCl afforded the corresponding Zr and Hf carbene dibenzyl complexes (OCO)M(CH2Ph)(2) (4a, M = Zr; 4h, M = Hf), whose solid-state structures were confirmed by X-ray crystallography. 4a and 4b each feature a five-coordinate metal center with both benzyl moieties binding in a eta(2) fashion. The protonolysis reaction between species 4a (or 4b) and [HNMe2Ph][B(C6F5)(4)] afforded the clean and quantitative formation of the corresponding Zr (or HO anilinium benzyl cation 5a(+) (or 5b(+)). Remarkably, the cation 5a(+) catalyzes the highly regioselective oligomerization of 1-hexene with a marked preference for trimer formation.

  • Towards energy decomposition analysis for open and closed shell f-elements mono aqua complexes

    A. Marjolin, C. Gourlaouen, Carine Clavaguéra, J. -P. Dognon, J. -P. Piquemal
    Chemical Physics Letters, 2013, 563, pp.25-29. ⟨10.1016/j.cplett.2013.01.066⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    We propose an energy decomposition analysis of mono aqua systems of both open and closed shell lanthanide and actinide cations using the CSOV scheme. We compared the values obtained with either large f-in-core or small core quasi relativistic pseudopotentials and computed the unpaired electrons contribution to the polarization energy component. Through a quasi-systematic approach on a number of chosen f-element cations, we quantified the different trends across both series for each contribution. This work is an important preliminary step for the acquisition of reference ab initio data for further parameterization of polarizable force fields for lanthanides and actinides. (Cop) 2013 Elsevier B. V. All rights reserved.

  • Coordination of 12-Electron Organometallic Fragments to the Arene Ring of Nonsymmetric Group 10 POCOP Pincer Complexes.

    Espinosa-Jalapa Noël Angel, Simon Hernandez-Ortega, X. F Le Goff, David Morales-Morales, Jean-Pierre Djukic, Ronan Le Lagadec
    Organometallics, 2013, 32 (9), pp.2661-2673. ⟨10.1021/om400147x⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    A series of heterobimetallic complexes have been prepared in good yields by η6 coordination of [Cp*Ru]+, [CpRu]+, [CpFe]+, and [Cr(CO)3] fragments to the aromatic ring of nonsymmetric Ni(II), Pd(II), and Pt(II) naphthoresorcinate POCOP compounds, and the molecular structures of the new compounds have been unequivocally determined by single-crystal X-ray diffraction crystallography. The reaction is regiospecific, and only coordination at the noncyclometalated ring is observed. The coordination occurs in an orthogonal fashion, and as a consequence, the heterobimetallic species exhibit axial desymmetrization of the pincer fragment, generating molecules with planar chirality. In addition, the electronic properties of the metal center can be tuned by the effect of π coordination of the second metal, as shown by electrochemical studies. The observed specificity of the reaction is discussed and supported with theoretical studies.

  • An interlaboratory study of TEX86 and BIT analysis of sediments, extracts, and standard mixtures

    Stefan Schouten, Ellen C. Hopmans, Antoni Rosell-Melé, Ann Pearson, Pierre Adam, Thorsten Bauersachs, Edouard Bard, Stefano M. Bernasconi, Thomas S. Bianchi, Jochen J. Brocks, Laura Truxal Carlson, Isla S. Castaneda, Sylvie Derenne, Ayca Dogrul Selver, Koushik Dutta, Timothy Eglinton, Céline Fosse, Valier Galy, Kliti Grice, Kai-Uwe Hinrichs, Yongsong Huang, Arnaud Huguet, Carme Huguet, Sarah Hurley, Anitra Ingalls, Guodong Jia, Brendan Keely, Chris Knappy, Miyuki Kondo, Srinath Krishnan, Sara Lincoln, Julius Lipp, Kai Mangelsdorf, Alfredo Martinez-Garcia, Guillemette Ménot, Anchelique Mets, Gesine Mollenhauer, Naohiko Ohkouchi, Jort Ossebaar, Mark Pagani, Richard D. Pancost, Emma J. Pearson, Francien Peterse, Gert-Jan Reichart, Philippe Schaeffer, Gaby Schmitt, Lorenz Schwark, Sunita R. Shah, Richard W. Smith, Rienk H. Smittenberg, Roger E. Summons, Yoshinori Takano, Helen M. Talbot, Kyle W. R. Taylor, Rafael Tarozo, Masao Uchida, Bart E. Van Dongen, Benjamin A. S. van Mooy, Jinxiang Wang, Courtney Warren, Johan W. H. Weijers, Josef P. Werne, Martijn Woltering, Shucheng Xie, Masanobu Yamamoto, Huan Yang, Chuanlun L. Zhang, Yige Zhang, Meixun Zhao, Jaap S. Sinninghe Damste
    Geochemistry, Geophysics, Geosystems, 2013, 14 (12), pp.5263-5285. ⟨10.1002/2013GC004904⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Two commonly used proxies based on the distribution of glycerol dialkyl glycerol tetraethers (GDGTs) are the TEX86 (TetraEther indeX of 86 carbon atoms) paleothermometer for sea surface temperature reconstructions and the BIT (Branched Isoprenoid Tetraether) index for reconstructing soil organic matter input to the ocean. An initial round-robin study of two sediment extracts, in which 15 laboratories participated, showed relatively consistent TEX86 values (reproducibility +/- 3-4 degrees C when translated to temperature) but a large spread in BIT measurements (reproducibility +/- 0.41 on a scale of 0-1). Here we report results of a second round-robin study with 35 laboratories in which three sediments, one sediment extract, and two mixtures of pure, isolated GDGTs were analyzed. The results for TEX86 and BIT index showed improvement compared to the previous round-robin study. The reproducibility, indicating interlaboratory variation, of TEX86 values ranged from 1.3 to 3.0 degrees C when translated to temperature. These results are similar to those of other temperature proxies used in paleoceanography. Comparison of the results obtained from one of the three sediments showed that TEX86 and BIT indices are not significantly affected by interlaboratory differences in sediment extraction techniques. BIT values of the sediments and extracts were at the extremes of the index with values close to 0 or 1, and showed good reproducibility (ranging from 0.013 to 0.042). However, the measured BIT values for the two GDGT mixtures, with known molar ratios of crenarchaeol and branched GDGTs, had intermediate BIT values and showed poor reproducibility and a large overestimation of the true (i.e., molar-based) BIT index. The latter is likely due to, among other factors, the higher mass spectrometric response of branched GDGTs compared to crenarchaeol, which also varies among mass spectrometers. Correction for this different mass spectrometric response showed a considerable improvement in the reproducibility of BIT index measurements among laboratories, as well as a substantially improved estimation of molar-based BIT values. This suggests that standard mixtures should be used in order to obtain consistent, and molar-based, BIT values.

  • Cyclopentadienyl N-heterocyclic carbene-nickel complexes as efficient pre-catalysts for the hydrosilylation of imines.

    Linus P. Bheeter, Mickael Henrion, Michael J. Chetcuti, Christophe Darcel, Vincent Ritleng, Jean-Baptiste Sortais
    Catalysis Science & Technology, 2013, 3, pp.3111--3116. ⟨10.1039/c3cy00514c⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    The in situ generated nickel hydride complex, [Ni(Mes2NHC)HCp], and its cationic analog, [Ni(Mes2NHC)(NCMe)Cp](PF6), are efficient and chemoselective pre-catalysts for the hydrosilylation of both aldimines and ketimines under mild conditions. [on SciFinder(R)]

  • The asymmetric binding of PGC-1α to the ERRα and ERRγ nuclear receptor homodimers involves a similar recognition mechanism

    Maria Takacs, Maxim V. Petoukhov, Robert Andrew Atkinson, Pierre Roblin, François-Xavier Ogi, Borries Demeler, Noëlle Potier, Yassmine Chebaro, Annick Dejaegere, Dmitri Svergun, Dino Moras, Isabelle M L Billas
    PLoS ONE, 2013, 8 (7), ⟨10.1371/journal.pone.0067810⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Background: PGC-1 alpha is a crucial regulator of cellular metabolism and energy homeostasis that functionally acts together with the estrogen-related receptors (ERR alpha and ERR gamma) in the regulation of mitochondrial and metabolic gene networks. Dimerization of the ERRs is a pre-requisite for interactions with PGC-1 alpha and other coactivators, eventually leading to transactivation. It was suggested recently (Devarakonda et al) that PGC-1 alpha binds in a strikingly different manner to ERR gamma ligand-binding domains (LBDs) compared to its mode of binding to ERR alpha and other nuclear receptors (NRs), where it interacts directly with the two ERR gamma homodimer subunits. Methods/Principal Findings: Here, we show that PGC-1 alpha receptor interacting domain (RID) binds in an almost identical manner to ERR alpha and ERR gamma homodimers. Microscale thermophoresis demonstrated that the interactions between PGC-1 alpha RID and ERR LBDs involve a single receptor subunit through high-affinity, ERR-specific L3 and low-affinity L2 interactions. NMR studies further defined the limits of PGC-1 alpha RID that interacts with ERRs. Consistent with these findings, the solution structures of PGC-1 alpha/ERRa LBDs and PGC-1 alpha/ERRc LBDs complexes share an identical architecture with an asymmetric binding of PGC-1 alpha to homodimeric ERR. Conclusions/Significance: These studies provide the molecular determinants for the specificity of interactions between PGC-1 alpha and the ERRs, whereby negative cooperativity prevails in the binding of the coactivators to these receptors. Our work indicates that allosteric regulation may be a general mechanism controlling the binding of the coactivators to homodimers.

  • Hemicryptophane-assisted electron transfer: a structural and electronic study

    Olivier Perraud, Jean-Bernard Tommasino, Vincent Robert, Belen Albela, Lhoussain Khrouz, Laurent Bonneviot, Jean-Pierre Dutasta, Alexandre Martinez
    Dalton Transactions, 2013, 42 (5), pp.1530-1535. ⟨10.1039/c2dt31530k⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Three copper(II)@hemicryptophane complexes with various cavity sizes and shapes, Cu(II)@1, Cu(II)@2 and Cu(II)@3, were synthesized and characterized by near-IR/vis and EPR spectroscopies. The spectroscopic data are consistent with the presence of a trigonal-bipyramidal geometry of the N4Cu·H2O core, in accord with the energy-minimized structures obtained from DFT calculations. Cyclic voltammetry studies in CH2Cl2 showed irreversible redox processes, whereas electrolysis coulometry indicated that Cu(II)/Cu(I) complexes could be interconverted. Electrochemistry data of the complexes stress the crucial role of the cage structure of the hemicryptophane in the thermodynamics of the electron transfer. Graphical abstract: Hemicryptophane-assisted electron transfer: a structural and electronic study

  • A stable and strongly luminescent dinuclear Cu(i) helical complex prepared from 2-diphenylphosphino-6-methylpyridine

    J.-J. Cid, J. Mohanraj, M. Mohankumar, M. Holler, G. Accorsi, Lydia Brelot, I. Nierengarten, Omar Moudam, Adrien Kaeser, B. Delavaux-Nicot, N. Armaroli, J.-F. Nierengarten
    Chemical Communications, 2013, 49 (9), pp.859-861. ⟨10.1039/c2cc37873f⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Treatment of 2-diphenylphosphino-6-methylpyridine (dpPyMe) with Cu(CH3CN)4BF4 afforded the stable dinuclear Cu(i) complex [Cu2([small mu ]-dpPyMe)3(CH3CN)](BF4)2. This compound is a weak emitter in solution, however a remarkably high emission quantum yield (46%) has been found in a rigid matrix at room temperature.

  • Gene coexpression analysis reveals complex metabolism of the monoterpene alcohol linalool in Arabidopsis flowers.

    Jean-Francois Ginglinger, Benoit Boachon, René Höfer, Christian Paetz, Tobias G. Köllner, Laurence Miesch, Raphaël Lugan, Raymonde Baltenweck, Jérome Mutterer, Pascaline Ullmann, Franziska Beran, Patricia Claudel, Francel Verstappen, Marc Fischer, Francis F. Karst, Harro Bouwmeester, Michel Miesch, Bernd Schneider, Jonathan Gershenzon, Jürgen Ehlting, Danièle Werck-Reichhart
    The Plant cell, 2013, 25 (11), pp.4640-4657. ⟨10.1105/tpc.113.117382⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    The cytochrome P450 family encompasses the largest family of enzymes in plant metabolism, and the functions of many of its members in Arabidopsis thaliana are still unknown. Gene coexpression analysis pointed to two P450s that were coexpressed with two monoterpene synthases in flowers and were thus predicted to be involved in monoterpenoid metabolism. We show that all four selected genes, the two terpene synthases (TPS10 and TPS14) and the two cytochrome P450s (CYP71B31 and CYP76C3), are simultaneously expressed at anthesis, mainly in upper anther filaments and in petals. Upon transient expression in Nicotiana benthamiana, the TPS enzymes colocalize in vesicular structures associated with the plastid surface, whereas the P450 proteins were detected in the endoplasmic reticulum. Whether they were expressed in Saccharomyces cerevisiae or in N. benthamiana, the TPS enzymes formed two different enantiomers of linalool: (-)-(R)-linalool for TPS10 and (+)-(S)-linalool for TPS14. Both P450 enzymes metabolize the two linalool enantiomers to form different but overlapping sets of hydroxylated or epoxidized products. These oxygenated products are not emitted into the floral headspace, but accumulate in floral tissues as further converted or conjugated metabolites. This work reveals complex linalool metabolism in Arabidopsis flowers, the ecological role of which remains to be determined.

  • Arabidopsis ERG28 tethers the sterol C4-demethylation complex to prevent accumulation of a biosynthetic intermediate that interferes with polar auxin transport.

    Alexis Samba Mialoundama, Nurul Jadid, Julien Brunel, Thomas Di Pascoli, Dimitri Heintz, Mathieu Erhardt, Jérôme Mutterer, Marc Bergdoll, Daniel Ayoub, Alain van Dorsselaer, Alain Rahier, Paul Nkeng, Philippe Geoffroy, Michel Miesch, Bilal Camara, Florence Bouvier
    The Plant cell, 2013, 25 (12), pp.4879-4893. ⟨10.1105/tpc.113.115576⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Sterols are vital for cellular functions and eukaryotic development because of their essential role as membrane constituents. Sterol biosynthetic intermediates (SBIs) represent a potential reservoir of signaling molecules in mammals and fungi, but little is known about their functions in plants. SBIs are derived from the sterol C4-demethylation enzyme complex that is tethered to the membrane by Ergosterol biosynthetic protein28 (ERG28). Here, using nonlethal loss-of-function strategies focused on Arabidopsis thaliana ERG28, we found that the previously undetected SBI 4-carboxy-4-methyl-24-methylenecycloartanol (CMMC) inhibits polar auxin transport (PAT), a key mechanism by which the phytohormone auxin regulates several aspects of plant growth, including development and responses to environmental factors. The induced accumulation of CMMC in Arabidopsis erg28 plants was associated with diagnostic hallmarks of altered PAT, including the differentiation of pin-like inflorescence, loss of apical dominance, leaf fusion, and reduced root growth. PAT inhibition by CMMC occurs in a brassinosteroid-independent manner. The data presented show that ERG28 is required for PAT in plants. Furthermore, it is accumulation of an atypical SBI that may act to negatively regulate PAT in plants. Hence, the sterol pathway offers further prospects for mining new target molecules that could regulate plant development.

  • RETRACTED: Reaction of a bidentate ligands (4,4′-dimethyl 2,2′-bipyridine ) with planar-chiral chloro-bridged ruthenium: Synthesis of cis-dicarbonyl[4,4′-dimethyl-2,2′-bipyridine- κ O 1 , κ O 2 ]{2-[tricarbonyl( η 6 -phenylene- κ C 1 )chromium]pyridine- κ N }ruthenium hexafluorophosphate

    Akram Hijazi, Hussein Hamad, Jean-Pierre Djukic, Ahmad Daher, Mohamad Reda, Mathieu Walther, Louis Ricard
    Inorganica Chimica Acta, 2013, 395, pp.151-153. ⟨10.1016/j.ica.2012.11.002⟩ | Publiée le 1 janvier 2013
    Article dans une revue

  • Understanding the structure and electronic properties of Th4+-water complexes

    Christophe Gourlaouen, Carine Clavaguéra, Aude Marjolin, Jean-Philip Piquemal, Jean-Pierre Dognon
    Canadian Journal of Chemistry, 2013, 91 (9), pp.821-831. ⟨10.1139/cjc-2012-0546⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    Le présent article a pour but de présenter une étude de chimie quantique systématique des complexes [Th(H2O)n]4+ (n = 1 à 10) réalisée en vue de comprendre leur structure électronique et leurs propriétés : l'effet de la distribution du ligand sur les couches de valence de l'ion thorium(IV) est étudié par une analyse topologique de la fonction de localisation électronique (ELF). Une attention particulière est accordée à l'étude du complexe monoaqua dans sa géométrie d'équilibre en utilisant divers outils, tels des analyses de décomposition de l'énergie d'interaction (EDA), ainsi que le long de son chemin de dissociation. En effet, comme plusieurs états électroniques croisent l'état fondamental Th4+-H2O0 le long du chemin d'énergie minimale, nous démontrons que la représentation diabatique implémentée dans MOLPRO est capable de générer les surfaces d'énergie potentielle de référence qui mènerons à l'évaluation des courbes de dissociation diabatique. La courbe d'énergie d'interaction diabatique calculée permettra de procéder à une paramétrisation cohérente des champs de forces de nouvelle génération consacrés aux métaux lourds en se basant sur la chimie quantique. [Traduit par la Rédaction]

  • Experimental and Theoretical Study of the n-Doped Successive Polyanions of Oligocruciform Molecular Wires: Up to Five Units of Charge

    Abdelaziz Al Ouahabi, Paul Baxter, Claude Mathis, Maxime Bernard, Bertrand Vileno, Jean-Paul Gisselbrecht, Philippe Turek, Jean-Marie Mouesca, Sylvie Choua
    ChemPhysChem, 2013, 14 (5), pp.958-969. ⟨10.1002/cphc.201200848⟩ | Publiée le 1 janvier 2013
    Article dans une revue

    The electronic structure of polyanions of sterically encumbered triisopropylsilyl-substituted linear and cyclic oligo(phenylene-ethynylene)s (Monomer, Trimer, Pentamer, and Triangle) is investigated by electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR), and UV/Vis–near-infrared (NIR) spectroscopies, cyclic voltammetry, and theoretical calculations (DFT). Increasing anion orders are generated sequentially in vacuo at room temperature by chemical reaction with potassium metal up to the pentaanion. The relevance of these compounds acting as electron reservoirs is thus demonstrated. Even-order anions are EPR silent, whereas the odd species exhibit different signatures, which are identified after comparison of the measured hyperfine couplings by ENDOR spectroscopy with those predicted by DFT calculations. With increasing size of the oligomers the electron spin density is first distributed over the backbone carbon atoms for the monoanions, and then further localized at the outer phenyl rings for the trianion species. Examination of the UV/Vis-NIR spectra indicates that the monoanions (TC, PC) exhibit two transitions in the Vis-NIR region, whereas a strong absorption in the IR region is solely observed for higher reduced states. Electronic transitions of the neutral monoanions and trianions are redshifted with increasing oligomer size, whereas for a given oligomer a blueshift is observed upon increasing the charge, which suggests a localization of the spin density.

  • Synthesis, electrochemical and photophysical properties of covalently linked porphyrin-polyoxometalates

    Clémence Allain, Delphine Schaming, N. Karakostas, Marie Erard, J. P. Gisselbrecht, Sebastien Sorgues, Isabelle Lampre, L. Ruhlmann, B. Hasenknopf
    Dalton Transactions, 2012, 42 (8), pp.2745-2754. ⟨10.1039/c2dt31415k⟩ | Publiée le 1 décembre 2012
    Article dans une revue

    Two covalently linked porphyrin-polyoxometalate hybrids have been prepared: an Anderson-type hexamolybdate [N(C(4)H(9))(4)](3)[MnMo(6)O(18){(OCH(2))(3)CNHCO(ZnTPP)}(2)] with two pendant zinc(ii)-tetraphenylporphyrins, and a Dawson-type vanadotungstate [N(C(4)H(9))(4)](5)H[P(2)V(3)W(15)O(59){(OCH(2))(3)CNHCO(ZnTPP)}] with one porphyrin. Electrochemical studies show independent redox processes for the organic and inorganic parts at usual potentials. Photophysical studies reveal an electron transfer from the excited porphyrin to the Dawson polyoxometalate, but not to the Anderson polyoxometalate. Time resolved absorption spectroscopy allows the identification of the electron transfer pathways and the determination of the time constants.

  • Antiferromagnetic coupling across a tetrametallic unit through noncovalent interactions

    Eric Dahl, Frederick Baddour, Stephanie Fiedler, Wesley Hoffert, Matthew Shores, Gordon Yee, Jean-Pierre Djukic, Jeffrey Bacon, Arnold Rheingold, Linda Doerrer
    Chemical Science, 2012, 3 (2), pp.602-609. ⟨10.1039/C1SC00608H⟩ | Publiée le 17 novembre 2012
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    Three paramagnetic heterobimetallic lantern complexes of the form [PtM(tba)4(OH2)] (M = Fe, 1; Co, 2; Ni, 3; tba = thiobenzoate) have been prepd. in a single-step, bench-top procedure. In all three cases, a lantern structure with Pt-M bonding is obsd. in soln. and in the solid state. Compd. 1 is a monomer whereas 3 exists as a dimer in the solid state via a Pt···Pt metallophilic interaction. Compd. 2 has been characterized in forms with (2a, purple) and without (2b, yellow) Pt···Pt metallophilic interactions. The dimers 2a (J = -10 cm-1, based on the spin Hamiltonian H ̂= -2J(SA·SB)) and 3 (J = -60 cm-1) exhibit antiferromagnetic coupling between the two first-row metal ions in the solid state via a Pt···Pt noncovalent metallophilic interaction. The electronic structure of C4v [PtM(tba)4], C2 [PtM(tba)4(OH2)], (M = Fe, Co, Ni) and D2 symmetry [PtM(tba)4(OH2)]2 M = Co, Ni, units have been studied with DFT calcns., confirming the relative spin-state energies obsd. and the antiferromagnetic exchange pathway through four dz2 orbitals. The compds. 2a and 3 are the first examples of antiferromagnetic coupling through an unbridged M···M contact. [on SciFinder(R)]

  • 1D and 3D surface-assisted self-organization

    Matthieu Koepf, Frederic Cherioux, Jennifer Wytko, Jean Weiss
    Coordination Chemistry Reviews, 2012, 256, pp.2872. ⟨10.1016/j.ccr.2012.05.039⟩ | Publiée le 16 novembre 2012
    Article dans une revue

    In view of the many potential applications for functional hybrid interfaces, the controlled assembly of sophisticated structures on surfaces is a current challenge for chemists. Applications can be foreseen in fields such as molecular electronics, spintronics, sensors, catalysis and even synthesis. Independent of their functional nature, the characterization of nano-objects usually involves their deposition on surfaces. Whereas the formation of 2D networks on a surface corresponds to the association of scaffolds of the same dimensionality, 1D and 3D self-organized materials clearly differ from the 2D nature of the support. Unless necessary, organized 2D networks will not be examined in detail, as this subject has been periodically reviewed elsewhere. In this review, concepts originating from the 2D organization, but leading to the surface-assisted production of organized 1D and 3D self-assemblies will be examined and illustrated by selected recent examples from the literature. Three roles can be played by the surface. First, the surface can simply serve as an inert foundation for the organization of the functional layer, which is controlled by molecule-molecule interactions only. Second, the surface can be considered as a template by adding specific constraints to the assembly of the building blocks, restricting their conformational freedom and thus confining the growth in a surface plane or directing the growth of the nanostructures along specific symmetry axes (epitaxy) or surface defects and heterogeneities (step edges). This case seems the most conceptually advanced and has already led to integration of self-assembled materials into devices by using preferred orientations of the surface to align molecules in given directions, for example between interdigitated electrodes. Third, the surface itself can be a source of constituents, or adatoms, of the assembly and can alter the electronic structure of the building blocks, thus directly participating in the assembly process and final function of the structures. The latter case is more scarcely spread over different explorative works in which the major road maps are the successive growth of layers into three dimensions from a preorganized two dimensional (molecular) adlayer, as well as surface-induced reactions within an organized layer.

  • Room temperature tandem hydroamination and hydrosilation/protodesilation catalysis by a tricarbonylchromium-bound iridacycle.

    Wissam Iali, Frédéric La Paglia, X. F Le Goff, Dušan Sredojević, Michel Pfeffer, Jean-Pierre Djukic
    Chemical Communications, 2012, 48 (83), pp.10310-2. ⟨10.1039/c2cc35520e⟩ | Publiée le 25 octobre 2012
    Article dans une revue

    A chromiumtricarbonyl-bound iridacycle displays novel catalytic virtues for the conversion of terminal aromatic alkynes into racemic N-phenyl, 1-arylethylamines by tandem hydro-amination and hydrosilation/protodesilation reactions under mild "one pot" conditions.

  • Direct Electrochemistry of Cytochrome bo Oxidase at a series of Gold Nanoparticles-Modified Electrodes

    Frederic Melin, Thomas Meyer, Styven Lankiang, Sylvia K. Choi, Robert B. Gennis, Christian Blanck, Marc Schmutz, Petra Hellwig
    Electrochemistry Communications, 2012, 26, pp.105-108. ⟨10.1016/j.elecom.2012.10.024⟩ | Publiée le 23 octobre 2012
    Article dans une revue

    New membrane-protein based electrodes were prepared incorporating cytochrome bo(3) from E. coli and gold nanoparticles. Direct electron transfer between the electrode and the immobilized enzymes was achieved, resulting in an electrocatalytic activity in presence of O(2). The size of the gold nanoparticles was shown to be important and smaller particles were shown to reduce the overpotential of the process.

  • Unraveling the Role of Water in the Stereoselective Step of Aqueous Proline‐Catalyzed Aldol Reactions

    Jordi Ribas-Arino, Maria Angels Carvajal, Alain Chaumont, Marco Masia
    Chemistry - A European Journal, 2012, 18 (49), pp.15868-15874. ⟨10.1002/chem.201200007⟩ | Publiée le 16 octobre 2012
    Article dans une revue

    Abstract A multiscale computational study was performed with the aim of tracing the source of stereoselectivity and disclosing the role of water in the stereoselective step of propionaldehyde aldol self‐condensation catalyzed by proline amide in water, a reaction that serves as a model for aqueous organocatalytic aldol condensations. Solvent mixing and hydration behavior were assessed by classical molecular dynamics simulations, which show that the reaction between propanal and the corresponding enamine takes place in a fully hydrated environment. First‐principles molecular dynamics simulations were used to study the free‐energy profile of four possible reaction paths, each of which yields a different stereoisomer, and high‐level static first‐principles calculations were employed to characterize the transition states for microsolvated species. The first solvation shell of the oxygen atom of the electrophilic aldehyde at the transition states contains two water molecules, each of which donates one hydrogen bond to the nascent alkoxide and thereby largely stabilizes its excess electron density. The stereoselectivity originates in an extra hydrogen bond donated by the amido group of proline amide in two reaction paths.

  • Hydrosilylation of Aldehydes and Ketones Catalyzed by an N-Heterocyclic Carbene-Nickel Hydride Complex under Mild Conditions

    Linus P. Bheeter, Mickaël Henrion, Lydia Brelot, Christophe Darcel, Michael J. Chetcuti, Jean-Baptiste Sortais, Vincent Ritleng
    Advanced Synthesis and Catalysis, 2012, 354 (14-15), pp.2619-2624. ⟨10.1002/adsc.201200460⟩ | Publiée le 8 octobre 2012
    Article dans une revue

    Half-sandwich N-heterocyclic carbene (NHC)-nickel complexes of the general formula [Ni(NHC)ClCp†] (Cp†=Cp, Cp*) efficiently catalyze the hydrosilylation of aldehydes and ketones at room temperature in the presence of a catalytic amount of sodium triethylborohydride and thus join the fairly exclusive club of well-defined nickel(II) catalyst precursors for the hydrosilylation of carbonyl functionalities. Of notable interest is the isolation of an intermediate nickel hydride complex that proved to be the real catalyst precursor.

  • Vacancy-Induced Deformation in a CoFe Prussian Blue Analogue - A Theoretical Investigation

    Tim Krah, Nicolas Suaud, Alexandre Zanchet, Vincent Robert, Nadia Ben Amor
    European Journal of Inorganic Chemistry, 2012, 2012 (35), pp.5777-5783. ⟨10.1002/ejic.201200857⟩ | Publiée le 1 octobre 2012
    Article dans une revue

    The impact of the number and positions of Rb ions in the RbCo[Fe(CN)6] Prussian blue analogue is analyzed by means of complete active space self-consistent field (CASSCF) and subsequent second-order perturbation theory (CASPT2) calculations performed upon embedded cluster models. It is shown that the geometries and corresponding electronic structures of the monomeric [CoIII(NC)5(OH2)]2- and [CoII(NC)5(OH2)]3- units are differently affected when the apical cyanide ligand is substituted by a water molecule. The CoIII ion moves away from the equatorial plane by ca. 0.15 Å, whereas the CoII is almost not sensitive to the environmental change. Furthermore, we find that this phenomenon is rather independent of the positions and numbers of the nearest-neighbour alkali ions. The Co ion displacement directly controls the overlap between the bridging cyanide and metal ion orbitals, a scenario which might be favorable to trigger electron transfer in the photomagnetic dimeric CoFe units of the CoFe Prussian blue analogues.

  • Efficient computation of adiabatic electronic populations in multi-mode vibronic systems: Theory, implementation, and application

    Behnam Nikoobakht, Horst Köppel, Etienne Gindensperger, L. S. Cederbaum
    The Journal of Chemical Physics, 2012, 137 (11), pp.114110. ⟨10.1063/1.4753966⟩ | Publiée le 21 septembre 2012
    Article dans une revue

    The effective-mode formalism developed earlier is applied to efficiently compute adiabatic electronic populations of multi-mode vibronic systems. Two different versions of the formalism are utilized. In the first one, the effective modes are used as new vibrational basis, and the time-dependent wave function as well as populations are calculated numerically exactly. In the second variant, the hierarchy-of-modes formalism is applied as an approximation scheme which leads to accurate results when including typically 7-10 members of the hierarchy. While in the first version, the propagation of the wave packet becomes numerically tedious, the computation of the adiabatic populations is rendered possible at all. Through the hierarchy-of-modes formalism, both the propagation as well as computation of adiabatic populations are speeded up by 1-3 orders of magnitude in typical cases. The formalism is applied to study the dynamics of pyrazine-type models for varying vibronic coupling strength and a (very) large number of bath modes.

  • Induction of caspase 8 and reactive oxygen species by ruthenium-derived anticancer compounds with improved water solubility and cytotoxicity

    Vania Vidimar, Xiangjun Meng, Marcelina Klajner, Cynthia Licona, Ludivine Fetzer, Sebastien Harlepp, Pascal Hebraud, Marjorie Sidhoum, Claude Sirlin, Jean-Philippe Loeffler, Georg Mellitzer, Gianni Sava, Michel Pfeffer, Christian Gaiddon
    Biochemical Pharmacology, 2012, 84 (11), pp.1428-1436. ⟨10.1016/j.bcp.2012.08.022⟩ | Publiée le 1 septembre 2012
    Article dans une revue

    Organometallic compounds which contain metals, such as ruthenium or gold, have been investigated as a replacement for platinum-derived anticancer drugs. They often show good antitumor effects, but the identification of their precise mode of action or their pharmacological optimization is still challenging. We have previously described a class of ruthenium(II) compounds with interesting anticancer properties. In comparison to cisplatin, these molecules have lower side effects, a reduced ability to interact with DNA, and they induce cell death in absence of p53 through CHOP/DDIT3. We have now optimized these molecules by improving their cytotoxicity and their water solubility. In this article, we demonstrate that by changing the ligands around the ruthenium we modify the ability of the compounds to interact with DNA. We show that these optimized molecules reduce tumor growth in different mouse models and retain their ability to induce CHOP/DDIT3. However, they are more potent inducers of cancer cell death and trigger the production of reactive oxygen species and the activation of caspase 8. More importantly, we show that blocking reactive oxygen species production or caspase 8 activity reduces significantly the activity of the compounds. Altogether our data suggest that water-soluble ruthenium(II)-derived compounds represent an interesting class of molecules that, depending on their structures, can target several pro-apoptotic signaling pathways leading to reactive oxygen species production and caspase 8 activation. (C) 2012 Elsevier Inc. All rights reserved.

  • TRANSDIP: a trans-chelating ligand tailor-made for probing unusual Pd0 and PdII intermediates.

    Rafael Gramage-Doria, Dominique Armspach, Dominique Matt, Loïc Toupet
    Chemistry - A European Journal, 2012, 18 (35), pp.10813-6. ⟨10.1002/chem.201201403⟩ | Publiée le 27 août 2012
    Article dans une revue

    Forty years after Venanzi's seminal studies on trans-spanning diphosphines, a cavity-shaped trans chelator (TRANSDIP) has been used to monitor the stepwise formation of a carbon-carbon bond on a palladium centre. Furthermore, the ligand, which incorporates a cyclodextrin subunit, enabled the synthesis of the first η(2)-dioxygen complex in which the M-O(2) unit is entrapped within a cavity.

  • Non-conventional coordination of cavity-confined metal centres.

    Rafael Gramage-Doria, Loïc Toupet, Dominique Matt, Dominique Armspach
    Dalton Transactions, 2012, 41 (29), pp.8786-96. ⟨10.1039/c2dt30751k⟩ | Publiée le 7 août 2012
    Article dans une revue

    WIDEPHOS, a β-cyclodextrin cavitand bearing two introverted P(III) donor atoms, readily accommodates two converging Au-X fragments (X = Cl, Br, I). In the corresponding [(WIDEPHOS)(AuX)(2)] complexes, severe steric crowding within the cavity results in one of the P-Au-X rods deviating from linearity, as revealed by an X-ray diffraction study and unusual (31)P magnetic shielding of one of the two phosphorus signals. The cavitand ligand is also suited for hosting strained dipalladium moieties with a single chlorido bridge, thereby forming dynamic complexes in which ligand coordination to one of the metal centres occurs via an oschelating P,O-subunit.

  • Atomic C 6 dispersion coefficients: a four-component relativistic Kohn-Sham study

    David Sulzer, Patrick Norman, Trond Saue
    Molecular Physics, 2012, 110 (19-20), pp.2535-2541. ⟨10.1080/00268976.2012.709283⟩ | Publiée le 1 août 2012
    Article dans une revue

    We present C 6 homo- and heteroatomic dispersion coefficients for all closed-shell atoms of the periodic table based on dipole-dipole polarizabilities at imaginary frequencies calculated using our recent extension of the complex polarization propagator approach to the four-component relativistic Kohn-Sham approach. Lack of proper reference data bars definite conclusions as to which density functional shows the overall best performance, and we therefore call for state-of-the-art wave function-based correlated calculations of dispersion coefficients. Scalar relativistic effects are significant already for elements as light as zinc, whereas spin-orbit effects must be taken into account only for very heavy elements.

  • Peptide-nucleic acid nanostructures for transfection

    Burkhard Bechinger
    Biomolecular concepts, 2012, 3 (3), pp.283-293. ⟨10.1515/bmc-2011-0067⟩ | Publiée le 1 juin 2012
    Article dans une revue

    Abstract To use nucleic acids in biomedical research and medical applications, these highly hydrophilic macromolecules have to be transported through the organism, targeted to specific cell surfaces, and have to cross cellular barriers. To this end, nanosized transfection complexes have been designed and several of them have been successfully tested. Here, the different steps of the transfection process and the particular optimization protocols are reviewed, including the physicochemical properties of such vectors (size, charge, composition), protection in serum, cellular uptake, endosomal escape, and intracellular targeting. The transfection process has been subdivided into separate steps and here special emphasis is given to peptides that have been designed to optimize these steps individually. Finally, complex devices encompassing a multitude of beneficial functionalities for transfection have been developed.

  • Anionic RR120 dye adsorption onto raw clay: Surface properties and adsorption mechanism

    Emna Errais, Joëlle Duplay, Mourad Elhabiri, Mohamed Khodja, Ruben Ocampo-Torres, Raymonde Baltenweck-Guyot, Fadila Darragi
    Colloids and Surfaces A: Physicochemical and Engineering Aspects, 2012, 403, pp.69-78. ⟨10.1016/j.colsurfa.2012.03.057⟩ | Publiée le 1 juin 2012
    Article dans une revue

    Clay minerals are efficient adsorbent for dyes due to their colloidal properties. A Tunisian raw clay (Fouchana) composed of different species of clay minerals (kaolinite, smectite and minor illite) has shown efficiency for removal of anionic dye Reactive Red 120 (RR120) from aqueous solutions. In order to provide a better understanding of the role played by the different clay species in Fouchana, as well as the nature of the adsorption processes which are involved, a comparative study was conducted using standard clays, namely kaolinite KGa-2, smectite SWy-1 and illite IMt-2. Batch adsorption experiments were performed at ambient temperature and pH of the dye solutions. Acido-basic properties of the solid surfaces, electrophoretic mobility of particles, cation exchange capacity, amount of exchangeable cations and specific surface were investigated. Principal component analysis was used to highlight the influence of the physicochemical characteristics of the clay minerals in the adsorption behavior. The results show that for the conditions set in this study, kaolinite in the Fouchana raw clay plays a major role in anionic dye adsorption, mainly due to its acidic surface sites, but also to exchangeable aluminum (III) cations acting as bridges between the clay mineral and the dye molecules. Smectite and illite most likely play a secondary role by adsorption on exchangeable calcium (II) and dissociated Al (III)-OH groups. (C) 2012 Elsevier B.V. All rights reserved.

  • Bromide Complexation by the Eu III Lanthanide Cation in Dry and Humid Ionic Liquids: A Molecular Dynamics PMF Study

    Alain Chaumont, Georges Wipff
    ChemPhysChem, 2012, 13 (7), pp.1677-1686. ⟨10.1002/cphc.201200063⟩ | Publiée le 3 mai 2012
    Article dans une revue

    Abstract We report a molecular dynamics study on the EuBr n 3‐ n complexes ( n =0 to 6) formed upon complexation of Br − by Eu 3+ in the [BMI][PF 6 ], [BMI][Tf 2 N] and [MeBu 3 N][Tf 2 N] ionic liquids (ILs), to compare the effect of the IL anion (PF 6 − versus Tf 2 N − ), the IL cation (BMI + versus MeBu 3 N + ) and the “IL humidity” on their solvation and stability. In “dry” solutions all complexes remain stable and the first coordination shell of Eu 3+ is purely anionic (Br − and IL anions), surrounded by IL cations (BMI + or MeBu 3 N + ions). Long range “onion type” solvation features (up to 20 Å from Eu 3+ ), with alternating cation‐rich and anion‐rich solvent shells, are observed around the different complexes. The comparison of gas phase‐optimized structures of EuBr n 3‐ n complexes (that are unstable for n =5 and 6) with those observed in solution points to the importance of solvation forces on the nature of the complex, with a higher stabilization by imidazolium‐ than by ammonium‐based dry ILs. Adding water to the IL has different effects, depending on the IL. In the highly hygroscopic [BMI][PF 6 ] IL, Br − ligands are displaced by water, to finally form Eu(H 2 O) 9 3+ . In the less “humid” [BMI][Tf 2 N], the EuBr n 3‐ n complexes do not dissociate and coordinate at most 1–2 H 2 O molecules. We also calculated the free‐energy profiles (Potential of Mean Force calculations) for the stepwise complexation of Br − , and found significant solvent effects. EuBr 6 3− is predicted to form in both [BMI][PF 6 ] and [BMI][Tf 2 N], but not in [MeBu 3 N][Tf 2 N], mainly due to weaker interactions with the cationic solvation shell. First steps are found to be more exergonic in the PF 6 − ‐ than in the Tf 2 N − ‐based IL. Molecular dynamics (MD) comparisons between ILs and classical solvents (acetonitrile and water) are also reported, affording good agreement with the experimental observations of Br − complexation by trivalent lanthanides in these classical solvents.

  • Generative Topographic Mapping (GTM): Universal Tool for Data Visualization, Structure-Activity Modeling and Dataset Comparison

    Nathalie Kireeva, Igor Baskin, Héléna Gaspar, Dragos Horvath, Gilles Marcou, Alexandre Varnek
    Molecular Informatics, 2012, 31 (3-4), pp.301-312. ⟨10.1002/minf.201100163⟩ | Publiée le 4 avril 2012
    Article dans une revue

    Here, the utility of Generative Topographic Maps (GTM) for data visualization, structure‐activity modeling and database comparison is evaluated, on hand of subsets of the Database of Useful Decoys (DUD). Unlike other popular dimensionality reduction approaches like Principal Component Analysis, Sammon Mapping or Self‐Organizing Maps, the great advantage of GTMs is providing data probability distribution functions (PDF), both in the high‐dimensional space defined by molecular descriptors and in 2D latent space. PDFs for the molecules of different activity classes were successfully used to build classification models in the framework of the Bayesian approach. Because PDFs are represented by a mixture of Gaussian functions, the Bhattacharyya kernel has been proposed as a measure of the overlap of datasets, which leads to an elegant method of global comparison of chemical libraries.

  • The membrane interactions of antimicrobial peptides revealed by solidstate NMR spectroscopy

    Burkhard Bechinger, Evgeniy Salnikov
    Chemistry and Physics of Lipids, 2012, 165 (3), pp.282-301. ⟨10.1016/j.chemphyslip.2012.01.009⟩ | Publiée le 1 avril 2012
    Article dans une revue

    <div><p>Solid-state NMR spectroscopic techniques provide valuable information about the structure, dynamics and topology of membrane-inserted polypeptides. In particular antimicrobial peptides (or 'host defense peptides') have early on been investigated by solid-state NMR spectroscopy and many technical innovations in this domain have been developed with the help of these compounds when reconstituted into oriented phospholipid bilayers. Using solidstate NMR spectroscopy it could be shown for the first time that magainins or derivatives thereof exhibit potent antimicrobial activities when their cationic amphipathic helix is oriented parallel to the bilayer surface, a configuration found in later years for many other linear cationic amphipathic peptides of this class. In contrast transmembrane alignments or lipid-dependent tilt angles have been found for more hydrophobic sequences such as alamethicin or -hairpin antimicrobials. This review presents various solid-state NMR approaches and develops the basic underlying concept how angular information can be obtained from oriented samples. It is demonstrated how this information is used to calculate structures and topologies of peptides in their native liquid-disordered phospholipid bilayer environment. Special emphasis is given to discuss which NMR parameters provide the most complementary information, the minimal number of restraints needed and the effect of motions on the analysis of the NMR spectra. Furthermore, recent 31 P and 2 H solid-state NMR measurements of lipids are presented including some unpublished data which aim at investigating the morphological and structural changes of oriented or non-oriented phospholipids. Finally the structural models that have been proposed for the mechanisms of action of these peptides will be presented and discussed in view of the solid-state NMR and other biophysical experiments.</p></div>

  • Comparative studies in series of cytochrome c oxidase models.

    F. Melin, A. Trivella, M. Lo, C. Ruzié, I. Hijazi, N. Oueslati, J. A. Wytko, B. Boitrel, C. Boudon, P. Hellwig, J. Weiss
    Journal of Inorganic Biochemistry, 2012, 108, pp.196-202. ⟨10.1016/j.jinorgbio.2011.11.016⟩ | Publiée le 1 mars 2012
    Article dans une revue

    This study compares the behavior as cytochrome c oxidase (CcO) functional and structural models of a series of reported and unreported ligands that provide either a binding site for copper without a built-in proximal base, or both a flexible binding site for copper and a built-in proximal base, or a fixed binding site for copper with a built-in proximal base. The comparisons of the models show that the relative position of the two metal sites is not only a crucial parameter in the control of the catalytic behavior but also essential in mimicking other features of the enzyme such as CO exchange between the ferrous heme a(3) and the cuprous Cu(B) center.

  • Retrodihydrochalcones in Sorghum species: Key intermediates in the biosynthesis of 3-deoxyanthocyanidins?

    Ali Khalil, Raymonde Baltenweck-Guyot, Ruben Ocampo-Torres, Pierre Albrecht
    Phytochemistry Letters, 2012, 5 (1), pp.174-176. ⟨10.1016/j.phytol.2011.12.004⟩ | Publiée le 1 mars 2012
    Article dans une revue

    Two new open chain flavonoids were isolated from the butanediol/ethanol extract of Sorghum bicolor (L.) Moench leaf sheaths by fractionation and purification processes. This work led to the structural characterization of the 3-(2,4,6-trihydroxyphenyl)-1-(4-hydroxyphenyl)-propan-1-one (or 2,4,4 ',6-tetrahydroxydihydrochalcone) 1, and 3-(2,6-dihydrox-4-methoxyphenyl)-1-(4-hydroxyphenyl)-propan-1-one (or 2,4 ',6-trihydroxy-4-methoxydihydro-chalcone) 2. The structures of these flavonoids were determined by extensive spectroscopic analyses, including UV, ESIMS, HRESIMS, 1D and 2D NMR. The chemical properties of 1 were similar to those earlier described in literature for apiforol, never fully characterized. These results led us to re-question the real structure of this flavan-4-ol, which is often described to be present in Sorghum and has even been considered as a key intermediate in the formation of Sorghum 3-deoxyanthocyanidins. (C) 2011 Phytochemical Society of Europe. Published by Elsevier B.V. All rights reserved.

  • Synthesis of extended porphyrins by connection of meso-aryl groups with beta-pyrrolic positions

    Ana M. V. M. Pereira, Sébastien Richeter, Christophe Jeandon, Jean-Paul Gisselbrecht, Jennifer Wytko, Romain Ruppert
    Journal of Porphyrins and Phthalocyanines, 2012, 16, pp.465-478. ⟨10.1142/S1088424612300029⟩ | Publiée le 8 février 2012
    Article dans une revue

    This review focuses on synthetic strategies leading to extended porphyrins, but is limited to examples in which at least one b-pyrrolic carbon is linked to a meso-aryl substituent. Friedel-Crafts reactions are covered first because historically they were the first reactions employed to link b-pyrrolic carbons with meso-aryl groups, thus creating new six-membered fused rings. Other reactions inserting heteroatoms follow. Direct cyclizations between an ortho-carbon and a b-pyrrolic position are presented next. Finally, new highly extended chromophores are described. These compounds are generally obtained in two consecutive reactions. First a Suzuki coupling is used to introduce an aryl group in one or two mesopositions. Then the new fused rings are generated by oxidative cyclizations.

  • Resorcin[4]arene-derived mono-, bis- and tetra-imidazolium salts as ligand precursors for Suzuki-Miyaura cross-coupling.

    Hani El Moll, David Semeril, Dominique Matt, Loïc Toupet, Jean-Jacques Harrowfield
    Organic & Biomolecular Chemistry, 2012, 10 (2), pp.372-82. ⟨10.1039/c1ob06404e⟩ | Publiée le 14 janvier 2012
    Article dans une revue

    Eleven resorcinarene cavitands bearing either one, two or four (3-R-1-imidazolylium)-methyl substituents (R = (n)Bu, Ph, Mes, (i)Pr(2)C(6)H(3)) anchored at resorcinolic "ortho" positions have been synthesised from the appropriate bromomethylated precursor. Combining the imidazolium salts with palladium acetate and Cs(2)CO(3) gave active Suzuki-Miyaura cross coupling catalysts. The highest activities were observed with the doubly functionalised cavitands, which all have the imidazolylium groups attached to proximal resorcinol units.

  • Copper(I)-Assembled [3]Rotaxane Whose Two Rings Act as Flapping Wings

    Antoine Joosten, Yann Trolez, Jean-Paul Collin, Valérie Heitz, Jean-Pierre Sauvage
    Journal of the American Chemical Society, 2012, 134 (3), pp.1802-1809. ⟨10.1021/ja210113y⟩ | Publiée le 11 janvier 2012
    Article dans une revue

    A new copper-complexed [3]rotaxane consisting of two coordinating 30-membered rings threaded by a two-binding-site axis has been prepared in good yield from relatively simple organic fragments. The main specificity of the system originates from the stoppering reaction, based on “click” chemistry, and thus from the presence of two triazole groups at positions next to the bidentate chelates of the axis central part. The geometry of the coordinating atoms belonging to the axis is such that the triazole groups can either be part of the coordinating fragments when the metal center is 5-coordinate or be not at all involved in coordination to the metal when the latter is 4-coordinate. To be more specific, when the two complexed metal centers are monovalent copper(I) centers, the triazoles are not included in the metal coordination sphere, whereas when the metal centers are Cu(II) or Zn2+, the triazole groups are bound to the metals. This is easily explained by the fact that Cu(I) is preferably 4-coordinate and Cu(II) and Zn2+ are 5-coordinate. The interconversion between both situations (4- or 5-coordinate) can be quantitatively induced by metal exchange (Cu(I)/Zn2+) or by a redox process (Cu(II)/Cu(I)). It leads to important geometrical changes and in particular to a strong modification of the angle between the two rings. As a consequence, the two threaded rings undergo a motion which is reminiscent of a wing-flapping movement similar to that of birds. This flapping motion is fast and quantitative. It should lead to new functional molecular machines in the future.

  • Synthesis, Characterization, and Fluxional Behavior of a 34 Electron Homochiral Dimetallic Complex with an Unsupported Hydride Bridge between Two Ru Atoms

    Jean-Pierre Djukic, Jean-Baptiste Sortais, Laurent Barloy, Nicolas Pannetier, Claude Sirlin, Michel Pfeffer
    Organometallics, 2012, 31 (7), pp.2821-2828. ⟨10.1021/om201093y⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    The binuclear η6-benzene cycloruthenated complex 2, which bears an unsupported bridging hydride ligand, was synthesized by treating the monomeric cationic cycloruthenated (R)-(+)-1-(1-naphthyl)ethylamine 1 with potassium hydroxide under biphasic conditions and then with an alcoholic solvent. Alternatively, compound 2 was prepared from an equimolar amount of compound 1 and the homologous monomeric hydrido complex 3. The crystal structure of 2 revealed π- stacking interactions between the naphthyl groups of each cyclometalated amine; the hydride ligand is bent, with a Ru−H−Ru angle of 145.3(10)°. Compound 2 is fluxional as shown by variable-temperature NMR analysis. DFT analysis of homochiral 2 and of its hypothetical heterochiral counterpart 2* revealed that dispersion-based π−π interactions between the cyclometalated ring are not the only interactions that must be taken into account to rationalize the conformational preference for 2. Indeed, the overall dispersion-based interactions between all the ligands of the connected metallacycles provide an additional 5 to 6 kcal/mol of stabilization energy for 2 regardless whether the π-stacking interactions between the naphthyl rings exist or not.

  • Ferromagnetic coupling induced by spin-orbit coupling in dipyridylamide linear trinuclear Cu-Pd-Cu and Cu-Pt-Cu complexes

    Daniel Maynau, Hélène Bolvin, Willem van den Heuvel, Marc Bénard, Marie-Madeleine Rohmer, Nadia Ben Amor
    Comptes Rendus. Chimie, 2012, 15 (2-3), pp.170-175. ⟨10.1016/j.crci.2011.10.004⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    The mechanism of the magnetic coupling in the [CuMCu(pda)4Cl2] complexes with M = Pd, Pt is analyzed. First principles calculations based on the wave function theory are performed (DDCI + SO-RASSI): it is shown that the interaction without spin-orbit coupling is antiferromagnetic while the contribution due to the spin-orbit is ferromagnetic. The agreement between calculations and experiment is very good for the CuPdCu complex but is lesser for the CuPtCu complex. A Hubbard model is used in order to rationalize these results: this shows that the two d frontier orbitals of the central atom play a key role in these two interactions. Although the model parameters extracted from CASCI calculations do not permit to recover the order of magnitude of the interactions, it allows understanding the main interactions that give physical insight.

  • Regioselective opening of proximally sulfato-capped cyclodextrins.

    Matthieu Jouffroy, Rafael Gramage-Doria, Dominique Armspach, Loïc Toupet, Dominique Matt
    Chemical Communications, 2012, 48 (48), pp.6028-6030. ⟨10.1039/c2cc31302b⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    Sulfato groups capping one or two pairs of adjacent glucose units in methylated cyclodextrin (CD) derivatives have been found to undergo regioselective opening with various nucleophiles; the reported methodology opens the way to the efficient synthesis of tridifferentiated α- and β-cyclodextrins that constitute key starting materials for the preparation of heteropolydentate cavitands.

  • Hemicryptophane host as efficient primary alkylammonium ion receptor

    Olivier Perraud, Sara Lefevre, Vincent Robert, Alexandre Martinez, Jean-Pierre Dutasta
    Organic & Biomolecular Chemistry, 2012, 10 (5), pp.1056-1059. ⟨10.1039/c1ob06657a⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    Hemicryptophane 3 was found to be an efficient and selective primary alkylammonium receptor. Binding constants are 1000-fold higher than those previously reported for hemicryptophane hosts. Efficient complexation of dopamine emphasizes the use of this host for neurotransmitter complexation. Density functional theory calculations were performed and highlight host–guest complementarities.

  • Design of flexible free standing plasma polymer-based films as hosts for enzyme immobilization

    C Amorosi, C Mustin, G Frache, P. Bertani, A Fahs, G Francius, V Toniazzo, D Ruch, V Ball, Luc Avérous, M Michel
    Journal of Physical Chemistry C, 2012, 116 (40), ⟨10.1021/jp3057114⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    This article deals with the elaboration and characterization of an original and easy way to produce templates able to host dyes and enzymes. The template films are made of plasma methacrylic acid (MAA) and ethylene glycol dimethacrylate (EGDMA) copolymers and allow for the design of a free-standing matrix able to host active enzymes. Plasma copolymers based on 80/20% molar ratio MAA and EGDMA were prepared to obtain stable chemical plasma films containing carboxyl groups. The amount of such functional groups was quantified by chemical derivatization, Fourier transform infrared spectroscopy and nuclear magnetic resonance spectroscopies. The analysis reveals the possibility to produce stable coatings with accessible functional groups to control the affinity of the film for dyes such as toluidine blue and enzymes such as alkaline phosphatase. We showed that this kind of plasma film is able to entrap enzymes whose catalytic activity is still preserved. Enzymatic activity was studied by measuring the production of paranitrophenol from the hydrolysis of paranitrophenyl phosphate (PNP). This distribution of the enzyme across the film thickness was investigated by means of laser confocal scanning microscopy and time of flight secondary ion mass spectrometry. Some desorption of enzyme was observed during and after the first enzymatic assay, but stable activity was obtained thereafter. The mechanism by which the negatively charged enzyme is entrapped in the plasma polymer matrix, also carrying negatively charged groups, is briefly discussed. © 2012 American Chemical Society.

  • Cytochromes P450 CYP94C1 and CYP94B3 catalyze two successive oxidation steps of the plant hormone jasmonoyl-isoleucine for catabolic turnover

    T. Heitz, E. Widemann, R. Lugan, L. Miesch, P. Ullmann, L. Désaubry, E. Holder, B. Grausem, S. Kandel, M. Miesch, D. Werk-Reichhart, F. Pinot
    Journal of Biological Chemistry, 2012, 287 (9), pp.6296-6306. ⟨10.1074/jbc.M111.316364⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    The jasmonate hormonal pathway regulates important defensive and developmental processes in plants. Jasmonoyl-isoleucine (JA-Ile) has been identified as a specific ligand binding the COI1-JAZ co-receptor to relieve repression of jasmonate responses. Two JA-Ile derivatives, 12OH-JA-Ile and 12COOH-JA-Ile, accumulate in wounded Arabidopsis leaves in a COI1- and JAR1-dependent manner and reflect catabolic turnover of the hormone. Here we report the biochemical and genetic characterization of two wound-inducible cytochromes P450, CYP94C1 and CYP94B3, that are involved in JA-Ile oxidation. Both enzymes expressed in yeast catalyze two successive oxidation steps of JA-Ile with distinct characteristics. CYP94B3 performed efficiently the initial hydroxylation of JA-Ile to 12OH-JA-Ile, with little conversion to 12COOH-JA-Ile, whereas CYP94C1 catalyzed preferentially carboxy-derivative formation. Metabolic analysis of loss- and gain-of-function plant lines were consistent with in vitro enzymatic properties. cyp94b3 mutants were largely impaired in 12OH-JA-Ile levels upon wounding and to a lesser extent in 12COOH-JA-Ile levels. In contrast, cyp94c1 plants showed wild-type 12OH-JA-Ile accumulation but lost about 60% 12COOH-JA-Ile. cyp94b3cyp94c1 double mutants hyperaccumulated JA-Ile with near abolition of 12COOH-JA-Ile. Distinct JA-Ile oxidation patterns in different plant genotypes were correlated with specific JA-responsive transcript profiles, indicating that JA-Ile oxidation status affects signaling. Interestingly, exaggerated JA-Ile levels were associated with JAZ repressor hyperinduction but did not enhance durably defense gene induction, revealing a novel negative feedback signaling loop. Finally, interfering with CYP94 gene expression affected root growth sensitivity to exogenous jasmonic acid. These results identify CYP94B3/C1-mediated oxidation as a major catabolic route for turning over the JA-Ile hormone.

  • A 1D coordination polymer built on asymmetric µ1,1,3-azide bridge: from unusual topology to magnetic properties and Cu(II)/Cu(I) redox reversibility

    Jean-Bernard Tommasino, Guillaume Chastanet, Boris Le Guennic, Vincent Robert, Guillaume Pilet
    New Journal of Chemistry, 2012, 36 (11), pp.2228-2235. ⟨10.1039/C2NJ40302A⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    An azide-bridged Cu(II) one dimensional polymer was synthesized in a one pot reaction in the presence of ammonia. The refined crystal structure evidenced the unusual asymmetric μ1,1,3 coordination mode of the azide ion leading to a {Cu(μ1,1,3-N3)(μ1-N3)(NH3)0.8(H2O)1.2}n chain. The redox process of this complex was studied by cyclic voltammetry evidencing the Cu(II)/Cu(I) reversibility. Magnetic measurements were interpreted as a uniform antiferromagnetic chain (J = −15.2 cm−1) holding rather strong inter-chain exchange (zJ′ = −2.8 cm−1). Multireference difference dedicated configuration interaction (DDCI) calculations confirmed the non-negligible intensity of inter-chain interactions and evidenced a strong influence of the type of coordinated solvent, NH3 or H2O, on the nature and magnitude of the magnetic exchange.

  • Structures and spectral properties of heteroleptic copper (I) complexes: A theoretical study based on density functional theory

    Megumi Kayanuma, Narayan Bera, Martina Sandroni, Yann Pellegrin, Errol Blart, Fabrice Odobel, Chantal Daniel
    Comptes Rendus. Chimie, 2012, 15 (2-3, SI), pp.255-266. ⟨10.1016/j.crci.2011.10.010⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    The structures and electronic absorption spectra of newly synthesized heteroleptic copper (I) complexes [CuL1L2](+) (L-1 = phen-imidazole and/or L-2 = dipyrido[3,2-a:2',3'-c] phenazine derivatives) are analyzed under the light of density functional theory (DFT) and time-dependent DFT (TD-DFT). The ground states geometries, characterized by pi-stacking interactions, have been optimized using PBE-D functional taking into account dispersion correction. The UV-visible theoretical absorption spectra have been calculated using B3LYP functional in vacuum and taking into account solvent corrections by means of the polarized continuum model (PCM). Whereas the PBE-D functional is well adapted to the determination of the structures, it does underestimate drastically the transition energies. The spectra are characterized by high density of states, mainly metal-to-ligand-charge-transfer (MLCT) and intra-ligand (IL), between 600 nm and 250 nm. Most of the complexes show an intense band in the near-UV energy domain (similar to 320 nm) corresponding to an IL transition. The lowest part of the absorption spectra, starting at 600 nm, corresponds to MLCT transitions leading to a shoulder observed experimentally between 400 and 500 nm. The upper part of the spectra, beyond 300 nm, puts in evidence strong mixing between ligand-to-ligand-charge-transfer (LLCT), IL and MLCT states. (C) 2011 Academie des sciences. Published by Elsevier Masson SAS. All rights reserved.

  • Synthesis of Planar Chiral Iridacycles by Cationic Metal p-Coordination: Facial Selectivity, and Conformational and Stereochemical Consequences

    X. F Le Goff, Michel Pfeffer, Jean-Pierre Djukic, Wissam Iali
    Chemistry - A European Journal, 2012, 18 (19), pp.6063-6078. ⟨10.1002/chem.201103577⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    Facial selectivity during the π-coordination of pseudo-tetrahedral iridacycles by neutral (Cr(CO)3), monocationic (Cp*Ru+), and biscationic (Cp*Ir2+) metal centers was directly influenced by the coulombic imbalance in the coordination sphere of the chelated Ir center. We also showed by using theoretical calculations that the feasibility of the related metallacycles that displayed metallocenic planar chirality was dependent to the presence of an electron-donating group, such as NMe2, which contributed to the overall stability of the complexes. When the π-bonded moiety was the strongly electron-withdrawing Cp*Ir2+ group, the electron donation from NMe2 resulted in major conformational changes, with a barrier to rotation of about 17 kcal mol−1 for this group that became spectroscopically diastereotopic (high-field 1H NMR spectroscopy). This peculiar property is proposed as a means to introduce a new type of constitutional chirality at the nitrogen center: planar chirality at tertiary aromatic amines.

  • Approaching an organic semimetal: Electron pockets at the Fermi level for a p-benzoquinonemonoimine zwitterion

    Luis Rosa, Julian Velev, Zhengzheng Zhang, Jose Alvira, Omar Vega, Gerson Diaz, Lucie Routaboul, Pierre Braunstein, Bernard Doudin, Yaroslav Losovyj, Peter Dowben
    physica status solidi (b), 2012, 249 (8), pp.1571-1576. ⟨10.1002/pssb.201147426⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    There is compelling evidence of electron pockets, at the Fermi level, in the band structure for an organic zwitterion molecule of the p-benzoquinonemonoimine type. The electronic structure of the zwitterion molecular film has a definite, although small, density of states evident at the Fermi level as well as a nonzero inner potential and thus is very different from a true insulator. In spite of a small Brillouin zone, significant band width is observed in the intermolecular band dispersion. The results demonstrate that Bloch's theorem applies to the wave vector dependence of the electronic band structure formed from the molecular orbitals of adjacent molecules in a molecular thin film of a p-benzoquinonemonoimine type zwitterion.

  • A robust zirconium N-heterocyclic carbene complex for the living and highly stereoselective ring-opening polymerization of rac-lactide

    Charles Romain, Benoit Heinrich, Stéphane Bellemin-Laponnaz, Samuel Dagorne
    Chemical Communications, 2012, 48 (16), pp.2213-2215. ⟨10.1039/c2cc16819g⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    A readily accessible and robust Zr-NHC complex was found to polymerize rac-lactide in a highly controlled, living and stereoselective manner to afford heterotactic PLA.

  • Acid extraction to a hydrophobic ionic liquid: the role of added tributylphosphate investigated by experiments and simulations

    C. Gaillard, V. Mazan, S. Georg, O. Klimchuk, M. Sypula, I. Billard, R. Schurhammer, G. Wipff
    Physical Chemistry Chemical Physics, 2012, 14, pp.5187-5199. ⟨10.1039/C2CP40129K⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    We have studied the extraction of four HA acids (HNO3, HReO4, HClO4, HCl) to a hydrophobic ionic liquid (IL) 1-butyl-3-methylimidazolium-bis(trifluoromethanesulfonyl)amide (BMI+ Tf2N−) at room temperature, in a wide range of acidic concentrations in water. The effect of tributylphosphate (TBP) as co-solvent is investigated. According to experimental observations, water dragging to the IL phase increases with added TBP and/or acids. Acid extraction is found to be weak, however, for the four acids except for concentrated HNO3 (>3 M). Molecular dynamics simulations on model biphasic systems show that TBP is not surface active, but well dissolved in the IL. They also reveal the importance of HA acid model (either totally or half dissociated) and of the TBP content on acid extraction to the IL. Furthermore, they show that "the proton" can be extracted by TBP (H3O+(TBP)3 "complex") without its A− conjugated base, via a cation transfer mechanism (BMI+ transfer to water). Experiments and simulations show that TBP plays an important role in the mutual solubility between water and ionic liquid, by different amounts, depending on the HA acid. On the other hand, both approaches indicate that a HTf2N containing aqueous solution completely mixes with the [BMI][Tf2N] IL that contains the same Tf2N− anion.

  • Perrhenate Complexation by Uranyl in Traditional Solvents and in Ionic Liquids: A Joint Molecular Dynamics/Spectroscopic Study

    A. Chaumont, O. Klimchuk, C. Gaillard, I. Billard, A. Ouadi, C. Hennig, G. Wipff
    Journal of Physical Chemistry B, 2012, 116, pp.3205-3219. ⟨10.1021/jp209476h⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    The complexation of perrhenate (ReO4-) anions by the uranyl (UO22+) cation has been investigated by joint molecular dynamics simulations and spectroscopic (UV-vis, TRLFS, and EXAFS) studies in aqueous solution, acetonitrile, and three ionic liquids (ILs), namely, [Bmi][Tf2N], [Me3BuN][Tf2N], and [Bu3MeN][Tf2N] that are based on the same Tf2N- anion (bis(trifluoromethylsulfonyl)imide) and either Bmi+ (1-butyl,3-methylimidazolium), Me3BuN+, or Bu3MeN+ cations. They show that ReO4- behaves as a weak ligand in aqueous solution and as a strong ligand in acetonitrile and in the ILs. According to MD simulations in aqueous solution, the UO2(ReO4)2 complex quickly dissociates to form UO2(H2O)52+, while in acetonitrile, a stable UO2(ReO4)53- species forms from dissociated ions. In the ILs, the UO2(ReO4)n2-n complexes (n = 1 to 5) remained stable along the dynamics, and to assess their relative stabilities, we computed the free energy profiles for stepwise ReO4- complexation to uranyl. In the two studied ILs, complexation is favored, leading to the UO2(ReO4)53- species in [Bmi][Tf2N] and to UO2(ReO4)42- in [Bu3MeN][Tf2N]. Furthermore, in both acetonitrile and [Bmi][Tf2N] solutions, MD and PMF simulations support the formation of dimeric uranyl complexes [UO2(ReO4)4]24- with two bridging ReO4- ligands. The simulation results are qualitatively consistent with spectroscopic observations in the different solvents, without firmly concluding, however, on the precise composition and structure of the complexes in the solutions.

  • Developing DNP/Solid-State NMR Spectroscopy of Oriented Membranes

    Evgeniy S. Salnikov, Olivier Ouari, Eline Koers, Hiba Sarrouj, Frank Franks, Melanie Rosay, Shane Pawsey, Christian Reiter, Priyanga Bandara, Hartmut Oschkinat, Paul Tordo, Frank Engelke, Burkhard Bechinger
    Applied Magnetic Resonance, 2012, 43 (1-2), pp.91 - 106. ⟨10.1007/s00723-012-0338-5⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    Dynamic nuclear polarization (DNP)/solid-state nuclear magnetic resonance (NMR) spectroscopy bears great potential for the investigation of membraneassociated polypeptides which can often be produced only in small amounts and which need to be ‘diluted’ in lipid bilayer environments to adopt or maintain their functional structure. Here we present investigations using biradicals, such as TOTAPOL and bTbK, for solid-state NMR signal enhancement using DNP in the context of lipid membranes. By transferring polarization from electron to nuclear spins using microwave irradiation signal enhancement factors of up to 13 are obtained with TOTAPOL and up to 17 with bTbK. The possible reasons why these factors are below those obtained in glassy samples of bulk solvents (40–60 under similar conditions) are evaluated and discussed. In order to further ameliorate the enhancement factors the physico-chemical characteristics of TEMPOL, TOTAPOL, bTbK, and bCTbK, such as their partitioning between hydrophilic and hydrophobic solvents or their stability under different environmental conditions are presented. Finally, having provided proof-of-concept that DNP/solid-state NMR measurements can be performed with oriented membrane samples work in progress is presented on the development of a flatcoil probe for DNP/solid-state NMR experiments on oriented membranes.

  • Dipole driven bonding schemes of quinonoid zwitterions on surfaces

    Donna Kunkel, Scott Simpson, Justin Nitz, Geoffrey Rojas, Eva Zurek, Lucie Routaboul, Bernard Doudin, Pierre Braunstein, Peter Dowben, Axel Enders
    Chemical Communications, 2012, 48 (57), pp.7143-7145. ⟨10.1039/c2cc32462h⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    The permanent dipole of quinonoid zwitterions changes significantly when the molecules adsorb on Ag(111) and Cu(111) surfaces. STM reveals that sub-monolayers of adsorbed molecules can exhibit parallel dipole alignment on Ag(111), in strong contrast with the antiparallel ordering prevailing in the crystalline state and retrieved on Cu(111) surfaces, which minimizes the dipoles electrostatic interaction energy. DFT shows that the rearrangement of electron density upon adsorption is a result of donation from the molecular HOMO to the surface, and back donation to the LUMO with a concomitant charge transfer that effectively reduces the overall charge dipole.

  • Structural diversity and versatility for organoaluminum complexes supported by mono- and di-anionic aminophenolate bidentate ligands

    Aline Maisse-François, Laurine Azor, Anne-Laure Schmitt, Ariane Coquel, Lydia Brelot, Richard Welter, Stéphane Bellemin-Laponnaz, Samuel Dagorne
    Journal of Organometallic Chemistry, 2012, 696 (26), pp.4248-4256. ⟨10.1016/j.jorganchem.2011.09.020⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    The present contribution describes the synthesis and structural characterization of structurally diverse organoaluminum species supported by variously substituted aminophenolate-type ligands: these Al complexes are all derived from the reaction of AlMe3 with aminophenols 2-CH2NH(R)-C6H3OH (1a, R = mesityl (Mes); 1b, R = 2,6-di-isopropylphenyl (Diip)) and 2-CH2NH(R)-4,6-Bu-t(2)-C6H2OH (1c, R = Mes; 1d, R = Diip). The low temperature reaction of AlMe3 with 1a-b readily affords the corresponding Al dimeric species [mu-eta(1), eta(1)-N,O-{2-CH2NH(R)-C6H4O}](2)Al2Me4 (2a-b), consisting of twelve-membered ring aluminacycles with two mu-eta(1), eta(1)-N,O-aminophenolate units, as determined by X-ray crystallographic studies. Heating a toluene solution of 2a (80 degrees C, 3 h) affords the quantitative and direct formation of the dinuclear aluminium complex Al[eta(2)-N; mu, eta(2)-O-{2-CH2N(Mes)-C6H4O}](AlMe2) (4a) while species 2b, under the aforementioned conditions, affords the formation of the Al dimeric species [eta(2)-N,O-{2-CH2N(Dipp)-C6H4O}AlMe](2) (3b), as deduced from X-ray crystallography for both 3b and 4a. In contrast, the reaction of bulky aminophenol pro-ligands 1c-d with AlMe3 afford the corresponding monomeric Al aminophenolate chelate complexes eta(2)-N,O-{2-CH2NH(R)-4,6-Bu-t(2)-C6H2O}AlMe2 (5c-d; R = Mes, Diip; Scheme 3) as confirmed by X-ray crystallographic analysis in the case of 5d. Subsequent heating of species 5c-d yields, via a methane elimination route, the corresponding Al-THF amido species eta(2)-N,O-{2-CH2N(R)-4,6-Bu-t(2)-C6H2O}Al(Me)(THF) (6c-d; R = Mes, Diip). Compounds 6c-6d, which are of the type {X-2}Al(R)(L) (L labile), may well be useful as novel well-defined Lewis acid species of potential use for various chemical transformations. Overall, the sterics of the aminophenol backbone and, to a lesser extent, the reaction conditions that are used for a given ligand/AlMe3 set essentially govern the rather diverse “structural” outcome in these reactions, with a preference toward the formation of mononuclear Al species (i.e. species 5c-d and 6c-d) as the steric demand of the chelating N,O-ligand increases. (C) 2011 Elsevier B.V. All rights reserved.

  • Magnetic properties of gold nanoparticles: A room-temperature quantum effect

    Romain Gréget, Gareth L. Nealon, Bertrand Vileno, Philippe Turek, Christian Mény, Frédéric Ott, Alain Derory, Emilie Voirin, Eric Rivière, Andrei Rogalev, Fabrice Wilhelm, Loïc Joly, William Knafo, Géraldine Ballon, Emmanuel Terazzi, Jean‐paul Kappler, Bertrand Donnio, Jean‐louis Gallani
    ChemPhysChem, 2012, 13 (13), pp.3092-3097. ⟨10.1002/cphc.201200394⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    Gold nanoparticles elicit a huge research activity in view of their applications in diagnostics,1, 2 therapy,3 drug or gene delivery,4 sensing5, 6, 7 and imaging.8 Gold nanoparticles also display interesting catalytic9, 10 and optical11, 12, 13, 14 properties. This Communication focuses on the least understood and so far unused property of gold: its becoming magnetic when prepared in the form of nanoparticles. All these desirable properties, bound together in one nanometric piece of matter, possibly self-organized thanks to its ligands, make functionalized gold nanoparticles a treasurable entity for nanosciences. The ex nihilo magnetic properties of functionalized gold (and other diamagnetic metals, such a Ag or Cu) nanoparticles, that is, their ferromagnetic-like behavior, are well documented, though still poorly understood.15 This unexpected property opens new perspectives in materials science, in particular for the design of metamaterials. One may also envisage applications in information storage and processing: nanometric magnetic particles with no obvious temperature limitation and possibly self-organizing are currently much sought-after by the computer industry and developing a room-temperature magnetic semiconductor is paramount for the realization of spintronics technologies. Herein, we wish to present the results of our own investigations into the magnetic properties of functionalized gold nanoparticles. We have made attempts at understanding this magnetic behavior using both traditional techniques (e.g. superconducting quantum interference device, SQUID, magnetometry) and other methods less common in this field, such as zero-field 197Au NMR (nuclear magnetic resonance) and SANS (small-angle neutron scattering). We also directly probed the local magnetic field at the surface of gold nanoparticles using paramagnetic TEMPO [(2,2,6,6-tetramethylpiperidin-1-yl)oxyl] radicals and ESR (electron spin resonance) spectrometry. Surprisingly, none of these experiments provided a clearer picture in fine. These “negative” results led us to pondering whether or not the explanation could be elsewhere. Our hypothesis is that the magnetism of gold (and possibly other metals) could very well originate in self-sustained persistent currents. We shall demonstrate hereafter that this hypothesis is indeed very plausible and would actually reconcile all of the experimental data reported to date. Striking results are often obtained when SQUID magnetometry is performed on functionalized Au nanoparticles, such as dodecanethiol-coated ones. Rather than being diamagnetic, as expected, the nanoparticles can be found to be para- or ferromagnetic at room temperature and above. When hysteresis is observed, the magnetization curve looks like that of a soft ferromagnet and exhibits a remnant magnetization MR and a coercive field HC, though both are rather weak. These parameters have been observed to have values that vary by orders of magnitude from sample to sample15 (see Figure ESI-1 of the Supporting Information). Very often, the magnetization does not saturate. Diamagnetic samples are more diamagnetic than the bulk metal. Also, the magnetic observables show little dependence on temperature between 2 and 400 K. The measurements reported so far have been performed by totally independent groups, on systems that were synthesized using known chemical procedures. Figure 1 compares the magnetization of bulk gold with that of two diamagnetic samples of gold nanoparticles. It can be seen that nanoparticles have a much larger absolute diamagnetic susceptibility than massive gold.

  • Combined Cation-π and Anion-π Interactions for Zwitterion Recognition

    Olivier Perraud, Vincent Robert, Heinz Gornitzka, Alexandre Martinez, Jean-Pierre Dutasta
    Angewandte Chemie International Edition, 2012, 51 (2), pp.504-508. ⟨10.1002/anie.201106934⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    Brothers and enemies: Anion–π and cation–π interactions act in a synergistic way when gathered in the molecular cavity of a hemicryptophane host, affording an efficient contribution (−170 kJ mol−1) in zwitterion recognition. NMR titration experiments and calculations reveal the positioning of the guest in the cavity of the heteroditopic receptor. This study emphasizes the importance of anion–π bonds in host–guest chemistry.

  • Altering the Static Dipole on Surfaces through Chemistry: Molecular Films of Zwitterionic Quinonoids

    Lucie Routaboul, Pierre Braunstein, Jie Xiao, Zhengzheng Zhang, Peter Dowben, Guillaume Dalmas, Victor da Costa, Olivier Felix, Gero Decher, Luis Rosa, Bernard Doudin
    Journal of the American Chemical Society, 2012, 134 (20), pp.8494-8506. ⟨10.1021/ja212104b⟩ | Publiée le 1 janvier 2012
    Article dans une revue

    The adsorption of molecular films made of small molecules with a large intrinsic electrical dipole has been explored. The data indicate that such dipolar molecules may be used for altering the interface dipole screening at the metal electrode interface in organic electronics. More specifically, we have investigated the surface electronic spectroscopic properties of zwitterionic molecules containing 12 pi electrons of the p-benzoquinonemonoimine type, C6H2((center dot center dot center dot) under bar NHR)(2)((center dot center dot center dot) under barO)(2) (R = H (1), n-C4H9 (2), C3H6-S-CH3 (3), C3H6-O-CH3 (4), CH2-C6H5 (5)), adsorbed on Au. These molecules are stable zwitterions by virtue of the meta positions occupied by the nitrogen and oxygen substituents on the central ring, respectively. The structures of 2-4 have been determined by single crystal X-ray diffraction and indicate that in these molecules, two chemically connected but electronically not conjugated 6 pi electron subunits are present, which explains their strong dipolar character. We systematically observed that homogeneous molecular films with thickness as small as 1 nm were formed on Au, which fully cover the surface, even for a variety of R substituents. Preferential adsorption toward the patterned gold areas on SiO2 substrates was found with 4. Optimum self-assembling of 2 and 5 results in ordered dose packed films, which exhibit n-type character, based on the position of the Fermi level dose to the conduction band minimum, suggesting high conductivity properties. This new type of self-assembled molecular fills offers interesting possibilities for engineering metal organic interfaces, of critical importance for organic electronics.

  • Formation of copper(I)-templated [2]rotaxanes using “click” methodology: influence of the base, the thread and the catalyst

    Fabien Durola, Stephanie Durot, Valérie Heitz, Antoine Joosten, Jean-Pierre Sauvage, Yann Trolez
    Journal of Inclusion Phenomena and Macrocyclic Chemistry, 2011, 71 (3-4), pp.507-515. ⟨10.1007/s10847-011-9986-6⟩ | Publiée le 1 décembre 2011
    Article dans une revue

    Three new copper(I)-assembled [2]rotaxanes incorporating the same macrocycle and different axes containing a bipy, a phen or a terpy have been synthesized thanks to CuAAC reaction for attaching the stoppers. The influence of the nature of the base used for the stoppering reaction was investigated on the formation of the bipy-containing rotaxane. The yield of the [2]rotaxane synthesis was increased when using a phen as a coordinating unit in the thread with [Cu(CH3CN)4](PF6) as catalyst. The strong influence of the nature of the catalyst was clearly evidenced for the formation of the terpy rotaxane, increasing the yield of the stoppering reaction from 0 to 95% by just substituting the Cu(I) catalyst. Finally, the best conditions found for our systems are the use of Na2CO3 as a base and Cu(tren′)Br as a catalyst.

  • A Designed Cavity for Zwitterionic Species: Selective Recognition of Taurine in Aqueous Media

    Olivier Perraud, Vincent Robert, Alexandre Martinez, Jean-Pierre Dutasta
    Chemistry - A European Journal, 2011, 17 (48), pp.13405-13408. ⟨10.1002/chem.201101522⟩ | Publiée le 1 novembre 2011
    Article dans une revue

    The perfect host: Hemicryptophane 1 selectively binds taurine neurotransmitters in CD3CN/D2O. Association constants determined by DOSY NMR spectroscopy demonstrate that this recognition is highly selective over other related substrates. DFT calculations emphasize that only weak intermolecular interactions stabilize the host–guest association (see figure).

  • A combined far-infrared spectroscopic and electrochemical approach for the study of iron-sulfur proteins

    Youssef El Khoury, Petra Hellwig
    ChemPhysChem, 2011, 12 (14), pp.2669-2674. ⟨10.1002/cphc.201100165⟩ | Publiée le 4 octobre 2011
    Article dans une revue

    Herein, we present the development of a far-infrared spectroscopic approach for studying metalloenzyme active sites in a redox-dependent manner. An electrochemical cell with 5 mm path and based on silicon windows was found to be appropriate for the measurement of aqueous solutions down to 200 cm(-1) . The cell was probed with the infrared redox signature of the metal-ligand vibrations of different iron-sulfur proteins. Each Fe-S cluster type was found to show a specific spectral signature. As a common feature, a downshift of the frequency of the Fe-S vibrations was seen upon reduction, in line with the increase of the Fe-S bond. This downshift was found to be fully reversible. Electrochemically induced FTIR difference spectroscopy in the far infrared is now possible, opening new perspectives on the understanding of metalloproteins in function of the redox state.

  • Cyclometalated Complexes of Ruthenium, Rhodium and Iridium as Catalysts for Transfer Hydrogenation of Ketones and Imines

    Nicolas Pannetier, Jean-Baptiste Sortais, Jean-Thomas Issenhuth, Laurent Barloy, Claude Sirlin, Alexandre Holuigue, Laurent Lefort, Lavinia Panella, Johannes G. de Vries, Michel Pfeffer
    Advanced Synthesis and Catalysis, 2011, 353 (14-15), pp.2844-2852. ⟨10.1002/adsc.201100152⟩ | Publiée le 1 octobre 2011
    Article dans une revue

    A library of organometallic compounds derived from primary and secondary amines cyclometalated by ruthenium(II), rhodium(III) and iridi- um(III) was tested in the asymmetric transfer hydrogenation of a number of ketones and imines. All compounds displayed high catalytic activity for the reduction of ketones under mild conditions. The most enantioselective catalysts were based on secondary amines containing two asymmetric carbon atoms bound to the nitrogen atom. For the reduction of aryl alkyl ketones [Ar(C[DOUBLE BOND]O)R where R=CH3 or CH2R′] the cyclometalated ruthenium and rhodium derivatives of the (2R,5R)-2,5-diphenylpyrrolidine ligand displayed the best results with respect to activity and selectivity (ees up to 97%). However, for the reduction of aryl tert-alkyl ketones [Ar(C[DOUBLE BOND]O)R′′ in which R′′ is a tertiary alkyl group] the best catalyst was a ruthenium compound derived from bis[(R)-1-phenylethyl]amine, allowing the reduction of isobutyrophenone and cyclohexyl phenyl ketone which were both reduced with high enantioselectivities (ees up to 98%). This shows that the cyclometalated compounds have a high substrate specificity. In addition, acyclic and cyclic imines were reduced with good selectivities by both rhodium(III) and iridium(III) metalacycles built up with (2R,5R)-2,5-diphenylpyrrolidine.

  • Measurement of carbon flux through the MEP pathway for isoprenoid synthesis by (31)P-NMR spectroscopy after specific inhibition of 2-C-methyl-d-erythritol 2,4-cyclodiphosphate reductase. Effect of light and temperature.

    Gaëlle Mongélard, Myriam Seemann, Anne-Marie Boisson, Michel Rohmer, Richard Bligny, Corinne Rivasseau
    Plant, Cell and Environment, 2011, 34 (8), pp.1241-7. ⟨10.1111/j.1365-3040.2011.02322.x⟩ | Publiée le 1 août 2011
    Article dans une revue

    The methylerythritol 4-phosphate (MEP) and the mevalonate pathways are the unique synthesis routes for the precursors of all isoprenoids. An original mean to measure the carbon flux through the MEP pathway in plants is proposed by using cadmium as a total short-term inhibitor of 2-C-methyl-d-erythritol 2,4-cyclodiphosphate (MEcDP) reductase (GcpE) and measuring the accumulation rate of its substrate MEcDP by (31) P-NMR spectroscopy. The MEP pathway metabolic flux was determined in spinach (Spinacia oleracea), pea (Pisum sativum), Oregon grape (Mahonia aquifolium) and boxwood (Buxus sempervirens) leaves. In spinach, flux values were compared with the synthesis rate of major isoprenoids. The flux increases with light intensity (fourfold in the 200-1200 µmol m(-2) s(-1) PPFR range) and temperature (sevenfold in the 25-37 °C range). The relationship with the light and the temperature dependency of isoprenoid production downstream of the MEP pathway is discussed.

  • Spin transition and exchange interaction: Janus visions of supramolecular spin coupling between face-to-face verdazyl radicals.

    Lucie Norel, Jean-Baptiste Rota, Lise-Marie Chamoreau, Guillaume Pilet, Vincent Robert, Cyrille Train
    Angewandte Chemie International Edition, 2011, 50 (31), pp.7128-31. ⟨10.1002/anie.201101190⟩ | Publiée le 25 juillet 2011
    Article dans une revue

    Look both ways : Coordination bonding of verdazyl radicals to diamagnetic metal ions dramatically modifies the crystal packing of the electronic spin bearers. The face‐to‐face positioning of two radicals leads to a magnetic behavior that is more relevant to a S =0 to S =1 spin‐transition phenomenon than to the usual exchange‐interaction view.

  • Ditopic bis(oxazolines): Synthesis and structural studies of zinc(II), copper(II) and nickel(II) complexes

    Adela Nano, Lydia Brelot, Guillaume Rogez, Aline Maisse-François, Stéphane Bellemin-Laponnaz
    Inorganica Chimica Acta, 2011, 376 (1), pp.285-289. ⟨10.1016/j.ica.2011.06.029⟩ | Publiée le 25 juin 2011
    Article dans une revue

    The synthesis, crystal structures, magnetic and spectroscopic properties of zinc(II), nickel(II) and copper(II) dinuclear complexes 2-4 of a novel dinucleating polyoxazoline ligand 1 are reported. X-ray analysis revealed that the three complexes are centrosymmetric dinuclear species with an overall S shape, the bisoxazoline moieties pointing toward the aromatic core of the molecule. Magnetic susceptibility measurements suggest that there is a very weak exchange interaction between the copper or nickel ions in complexes 3 and 4. (C) 2011 Elsevier B. V. All rights reserved.

  • Carbon nanotube-nucleobase hybrids: nanorings from uracil-modified single-walled carbon nanotubes.

    Prabhpreet Singh, Francesca Maria Toma, Jitendra Kumar, V. Venkatesh, Jesus Raya, Maurizio Prato, Sandeep Verma, Alberto Bianco
    Chemistry - A European Journal, 2011, 17 (24), pp.6772-80. ⟨10.1002/chem.201100312⟩ | Publiée le 6 juin 2011
    Article dans une revue

    Single-walled carbon nanotubes (SWCNTs) have been covalently functionalized with uracil nucleobase. The hybrids have been characterized by using complementary spectroscopic and microscopic techniques including solid-state NMR spectroscopy. The uracil-functionalized SWCNTs are able to self-assemble into regular nanorings with a diameter of 50-70 nm, as observed by AFM and TEM. AFM shows that the rings do not have a consistent height and thickness, which indicates that they may be formed by separate bundles of CNTs. The simplest model for the nanoring formation likely involves two bundles of CNTs interacting with each other via uracil-uracil base-pairing at both CNT ends. These nanorings can be envisaged for the development of advanced electronic circuits.

  • Electrochemistry of cytochrome c1, cytochrome c552, and CuA from the respiratory chain of Thermus thermophilus immobilized on gold nanoparticles

    Thomas Meyer, Julien Gross, Christian Blanck, Marc Schmutz, Bernd Ludwig, Petra Hellwig, Frederic Melin
    Journal of Physical Chemistry B, 2011, 115 (21), pp.7165-7170. ⟨10.1021/jp202656w⟩ | Publiée le 2 juin 2011
    Article dans une revue

    The electrochemical behavior of three proteins fragments from the respiratory chain of the extremophilic bacterium Thermus thermophilus , namely, cytochrome c(1) (Cyt-c(1)), cytochrome c(552) (Cyt-c(552)), and Cu(A), immobilized on three-dimensional gold nanoparticles electrodes was investigated by cyclic voltammetry. The gold nanoparticles were modified by either dithiobissuccinimidyl propionate (DTSP) or a mixed self-assembled monolayer of 6-mercaptohexan-1-ol and hexanethiol, depending on the surface of the protein. High surface coverages with enzymes and good electron transfer rates were achieved in the case of Cyt-c(1) immobilized on DTSP-modified gold nanoparticles and Cyt-c(552) or Cu(A) immobilized on mixed SAMs-modified gold nanoparticles. Interestingly, high surface coverages with Cu(A) were also observed on DTSP-modified gold nanoparticles, but a slower electron transfer rate was determined in this case. The gold nanoparticle/protein assemblies were characterized by surface-enhanced IR spectroscopy and transmission electron microscopy.

  • Mössbauer spectroscopy for heavy elements: a relativistic benchmark study of mercury

    Stefan Knecht, Samuel Fux, Robert van Meer, Lucas Visscher, Markus Reiher, Trond Saue
    Theoretical Chemistry Accounts: Theory, Computation, and Modeling, 2011, 129, pp.631. ⟨10.1007/s00214-011-0911-2⟩ | Publiée le 1 juin 2011
    Article dans une revue

    The electrostatic contribution to the Mössbauer isomer shift of mercury for the series HgF n (n = 1, 2, 4) with respect to the neutral atom has been investigated in the framework of four- and two-component relativistic theory. Replacing the integration of the electron density over the nuclear volume by the contact density (that is, the electron density at the nucleus) leads to a 10% overestimation of the isomer shift. The systematic nature of this error suggests that it can be incorporated into a correction factor, thus justifying the use of the contact density for the calculation of the Mössbauer isomer shift. The performance of a large selection of density functionals for the calculation of contact densities has been assessed by comparing with finite-field four-component relativistic coupled-cluster with single and double and perturbative triple excitations [CCSD(T)] calculations. For the absolute contact density of the mercury atom, the Density Functional Theory (DFT) calculations are in error by about 0.5%, a result that must be judged against the observation that the change in contact density along the series HgF n (n = 1, 2, 4), relevant for the isomer shift, is on the order of 50 ppm with respect to absolute densities. Contrary to previous studies of the 57Fe isomer shift (F Neese, Inorg Chim Acta 332:181, 2002), for mercury, DFT is not able to reproduce the trends in the isomer shift provided by reference data, in our case CCSD(T) calculations, notably the non-monotonous decrease in the contact density along the series HgF n (n = 1, 2, 4). Projection analysis shows the expected reduction of the 6s 1/2 population at the mercury center with an increasing number of ligands, but also brings into light an opposing effect, namely the increasing polarization of the 6s 1/2 orbital due to increasing effective charge of the mercury atom, which explains the non-monotonous behavior of the contact density along the series. The same analysis shows increasing covalent contributions to bonding along the series with the effective charge of the mercury atom reaching a maximum of around +2 for HgF4 at the DFT level, far from the formal charge +4 suggested by the oxidation state of this recently observed species. Whereas the geometries for the linear HgF2 and square-planar HgF4 molecules were taken from previous computational studies, we optimized the equilibrium distance of HgF at the four-component Fock-space CCSD/aug-cc-pVQZ level, giving spectroscopic constants r e = 2.007 Å and ω e = 513.5 cm−1.

  • Taxonomic characterisation of fresh Dipterocarpaceae resins by gas chromatography–mass spectrometry (GC–MS): providing clues for identification of unknown archaeological resins

    Pauline Burger, Armelle Charrié-Duhaut, Jacques Connan, Pierre Albrecht
    Archaeological and Anthropological Sciences, 2011, 3 (2), pp.185-200. ⟨10.1007/s12520-010-0050-z⟩ | Publiée le 1 juin 2011
    Article dans une revue

    Plant and particularly non-wood forest products have played an important role in the evolution of human cultures all over the world, as source of food but also of raw substances fulfilling material, spiritual, and medicinal requirements. Plant exudates and particularly dammar resins (Dipterocarpaceae family) were widely used in the past in Asia notably as waterproofing and caulking materials. This study focuses on the GC–MS chemical characterisation of freshly collected dammars and establishes new molecular parameters enabling discrimination between dammars and other types of plant resin, whatever their botanical origin. Such analyses provide clues for a precise identification (taxonomy, occurrence of other material in addition to the resin, alteration state) of unknown resinous material discovered in archaeological contexts. The value of our approach is illustrated by the taxonomic characterisation of two samples collected in jars from the Brunei wreck and a Chinese junk lost more than 40 km off the Sultanate of Brunei during the end of the fifteenth century or the early beginning of the sixteenth century.

  • Ranking High Affinity Ligands of Low Solubility by NMR Spectroscopy

    Isabelle Landrieu, Xavier Hanoulle, Bernd Fritzinger, Dragos Horvath, Jean-Michel Wieruszeski, Guy Lippens
    ACS Medicinal Chemistry Letters, 2011, 2 (6), pp.485-487. ⟨10.1021/ml200039u⟩ | Publiée le 1 juin 2011
    Article dans une revue

    Cyclosporine A (CsA) and its chemical analogues EthVal4Cs, MeVal4Cs, and Me(D-Ala)3EthVal4Cs (Alisporivir) all interact with cyclophilin A (CypA). The latter Alisporivir is a nonimmunosuppressive CsA derivative that has potent anti-HCV properties in clinical trials. We show here that NMR spectroscopy can be used to rank this series of related pharmacological molecules despite their high affinity for the target protein and low solubility in water. The novel method is based on the possibility to detect distinct NMR signals from the different protein complexes in a mixture. The method has enabled us to distinguish subtle effects of discrete chemical modifications of the parent molecule on the affinity of the ligands for the target protein.

  • Zinc inhibition of bacterial cytochrome bc(1) reveals the role of cytochrome b E295 in proton release at the Q(o) site

    Dong-Woo Lee, Youssef El Khoury, Francesco Francia, Barbara Zambelli, Giovanni Venturoli, Petra Hellwig, Fevzi Daldal
    Biochemistry, 2011, 50 (20), pp.4263-4272. ⟨10.1021/bi200230e⟩ | Publiée le 4 mai 2011
    Article dans une revue

    The cytochrome (cyt) bc(1) complex (cyt bc(1)) plays a major role in the electrogenic extrusion of protons across the membrane responsible for the proton motive force to produce ATP. Proton-coupled electron transfer underlying the catalysis of cyt bc(1) is generally accepted, but the molecular basis of coupling and associated proton efflux pathway(s) remains unclear. Herein we studied Zn(2+)-induced inhibition of Rhodobacter capsulatus cyt bc(1) using enzyme kinetics, isothermal titration calorimetry (ITC), and electrochemically induced Fourier transform infrared (FTIR) difference spectroscopy with the purpose of understanding the Zn(2+) binding mechanism and its inhibitory effect on cyt bc(1) function. Analogous studies were conducted with a mutant of cyt b, E295, a residue previously proposed to bind Zn(2+) on the basis of extended X-ray absorption fine-structure spectroscopy. ITC analysis indicated that mutation of E295 to valine, a noncoordinating residue, results in a decrease in Zn(2+) binding affinity. The kinetic study showed that wild-type cyt bc(1) and its E295V mutant have similar levels of apparent K(m) values for decylbenzohydroquinone as a substrate (4.9 ± 0.2 and 3.1 ± 0.4 μM, respectively), whereas their K(I) values for Zn(2+) are 8.3 and 38.5 μM, respectively. The calorimetry-based K(D) values for the high-affinity site of cyt bc(1) are on the same order of magnitude as the K(I) values derived from the kinetic analysis. Furthermore, the FTIR signal of protonated acidic residues was perturbed in the presence of Zn(2+), whereas the E295V mutant exhibited no significant change in electrochemically induced FTIR difference spectra measured in the presence and absence of Zn(2+). Our overall results indicate that the proton-active E295 residue near the Q(o) site of cyt bc(1) can bind directly to Zn(2+), resulting in a decrease in the electron transferring activity without changing drastically the redox potentials of the cofactors of the enzyme. We conclude that E295 is involved in proton efflux coupled to electron transfer at the Q(o) site of cyt bc(1).

  • Electrostatic Barriers in Rotaxanes and Pseudorotaxanes

    Mohamad Hmadeh, Albert Fahrenbach, Subhadeep Basu, Ali Trabolsi, Diego Benítez, Hao Li, Anne-Marie Albrecht-Gary, Mourad Elhabiri, J. Fraser Stoddart
    Chemistry - A European Journal, 2011, 17 (22), pp.6076-6087. ⟨10.1002/chem.201002933⟩ | Publiée le 15 avril 2011
    Article dans une revue

    Abstract The ability to control the kinetic barriers governing the relative motions of the components in mechanically interlocked molecules is important for future applications of these compounds in molecular electronic devices. In this Full Paper, we demonstrate that bipyridinium (BIPY 2+ ) dications fulfill the role as effective electrostatic barriers for controlling the shuttling and threading behavior for rotaxanes and pseudorotaxanes in aqueous environments. A degenerate [2]rotaxane, composed of two 1,5‐dioxynaphthalene (DNP) units flanking a central BIPY 2+ unit in the dumbbell component and encircled by the cyclobis(paraquat‐ p ‐phenylene) (CBPQT 4+ ) tetracationic cyclophane, has been synthesized employing a threading‐followed‐by‐stoppering approach. Variable‐temperature 1 H NMR spectroscopy reveals that the barrier to shuttling of the CBPQT 4+ ring over the central BIPY 2+ unit is in excess of 17 kcal mol −1 at 343 K. Further information about the nature of the BIPY 2+ unit as an electrostatic barrier was gleaned from related supramolecular systems, utilizing two threads composed of either two DNP units flanking a central BIPY 2+ moiety or a central DNP unit flanked by a BIPY 2+ moiety. The threading and dethreading processes of the CBPQT 4+ ring with these compounds, which were investigated by spectrophotometric techniques, reveal that the BIPY 2+ unit is responsible for affecting both the thermodynamics and kinetics of pseudorotaxane formation by means of an intramolecular self‐folding (through donor–acceptor interactions with the DNP unit), in addition to Coulombic repulsion. In particular, the free energy barrier to threading (Δ ) of the CBPQT 4+ for the case of the thread composed of a DNP flanked by two BIPY 2+ units was found to be as high as 21.7 kcal mol −1 at room temperature. These results demonstrate that we can effectively employ the BIPY 2+ unit to serve as electrostatic barriers in water in order to gain control over the motions of the CBPQT 4+ ring in both mechanically interlocked and supramolecular systems.

  • Magnetic and conduction properties in 1D organic radical materials: an ab initio inspection for a challenging quest.

    Martin Vérot, Jean-Baptiste Rota, Mikaël Kepenekian, Boris Le Guennic, Vincent Robert
    Physical Chemistry Chemical Physics, 2011, 13 (14), pp.6657-61. ⟨10.1039/C0CP02124E⟩ | Publiée le 14 avril 2011
    Article dans une revue

    The chemical control of magnetic and conduction properties for organic radicals is mainly based on t, the resonance integral, and U, the on-site repulsion, used in the Hubbard model. A qualitative analysis based on the competition between the kinetic and the Coulomb contribution, and the expression of the magnetic exchange coupling suggests that U should be roughly 800 cm(-1) while the resonance integral |t| should be 200 cm(-1) to reach bifunctionality. Ab initio wavefunction-based calculations allowed us to quantitatively measure those quantities for several organic materials considered as 1D systems starting from their reported crystal structures. The extraction of t and U parameters from the exchange coupling constants between neighbouring radicals allowed us to anticipate a possible metallic behaviour. Finally, the impact of chemical changes in the constitutive units is measured to rationalize the macroscopic behaviour modifications. It is shown that the intriguing regime characterized by simultaneous itinerant and localized electrons might be achieved by molecular engineering.

  • The Cooperative Effect in Ion-Pair Recognition by a Ditopic Hemicryptophane Host

    Olivier Perraud, Vincent Robert, Alexandre Martinez, Jean-Pierre Dutasta
    Chemistry - A European Journal, 2011, 17 (15), pp.4177-4182. ⟨10.1002/chem.201002116⟩ | Publiée le 1 avril 2011
    Article dans une revue

    The heteroditopic hemicryptophane 1, which bears a tripodal anion binding site and a cation recognition site in the molecular cavity, proved to be an efficient ion-pair receptor. The hemicryptophane host binds anions selectively depending on shape and hydrogen-bond-accepting ability. It forms an inclusion complex with the Me4N+ ion, which can simultaneously bind anionic species to provide anion@[1⋅Me4N+] complexes. The increased affinity of [1⋅Me4N+] for anionic species is attributed to a strong cooperative effect that arises from the properly positioned binding sites in the hemicryptophane cavity, thus allowing the formation of the contact ion pair. Density functional theory calculations were performed to analyze the Coulomb interactions of the ion pairs, which compete with the ion-dipole ones, that originate in the ion–hemicryptophane contacts.

  • Synthesis, Characterization, and Reactivity of Cationic Gold(I) r-Diimine Complexes

    Pierre de Frémont, Hervé Clavier, Vitor Rosa, Teresa Avilés, Pierre Braunstein
    Organometallics, 2011, ⟨10.1021/om2000426⟩ | Publiée le 31 mars 2011
    Article dans une revue

    A series of cationic gold(I) R-diimine complexes of the type [(NHC)Au(R-diimine)]X or [(PPh3)Au(R- diimine)]X, where NHC = IPr, R-diimine = BIAN-dipp, X = PF6 (1); X = BF4 (2); X = SbF6 (3); NHC = ItBu, R-diimine = BIAN-dipp, X = PF6 (4); X = BF4 (5); NHC = IMes, R-diimine = BIAN-dipp, X = PF6 (6); PPh3, R-diimine = BIAN-dipp, X = PF6 (7); NHC = IPr, R-diimine = DAB-Mes, X = PF6 (8, 10) bearing an N-heterocyclic carbene (NHC) or a phosphine ligand, have been synthesized and characterized by NMR spectroscopy and single crystal X-ray diffraction. The stability of the new complexes and their catalytic activity for the intermolecular addition of the indole nucleophilic carbon to 1,6-enyne were also investigated.

  • Insights into the mechanisms of action of host defence peptides from biophysical and structural investigations

    Burkhard Bechinger
    Journal of Peptide Science, 2011, 17 (5), pp.306-314. ⟨10.1002/psc.1343⟩ | Publiée le 28 février 2011
    Article dans une revue

    Abstract In order to better understand the mechanisms of action of linear cationic host defense peptides, biophysical and structural investigations of their interactions with membranes and with other biomacromolecules are reviewed. In particular, an extensive overview will be given of the topological studies of magainins in a number of different lipid environments. Furthermore, amphipathic helices have been designed in such a manner to allow the easy control of their membrane alignment. These peptides not only exhibit potent antimicrobial and transfection activities, but their investigation has also provided important insights into mechanistic aspects of their biological functions. Copyright © 2011 European Peptide Society and John Wiley &amp; Sons, Ltd.

  • Retrochalcone derivatives are positive allosteric modulators at synaptic and extrasynaptic GABA A receptors in vitro

    Ruotian Jiang, Akiko Miyamoto, Adeline Martz, Alexandre Specht, Hitoshi Ishibashi, Marie Kueny-Stotz, Stefan Chassaing, Raymond Brouillard, Lia Prado de Carvalho, Maurice Goeldner, Junichi Nabekura, Mogens Nielsen, Thomas Grutter
    British Journal of Pharmacology, 2011, 162 (6), pp.1326-1339. ⟨10.1111/j.1476-5381.2010.01142.x⟩ | Publiée le 22 février 2011
    Article dans une revue

    BACKGROUND AND PURPOSE Flavonoids, important plant pigments, have been shown to allosterically modulate brain GABA A receptors (GABA A Rs). We previously reported that trans ‐6,4′‐dimethoxyretrochalcone (Rc‐OMe), a hydrolytic derivative of the corresponding flavylium salt, displayed nanomolar affinity for the benzodiazepine binding site of GABA A Rs. Here, we evaluate the functional modulations of Rc‐OMe, along with two other synthetic derivatives trans ‐6‐bromo‐4′‐methoxyretrochalcone (Rc‐Br) and 4,3′‐dimethoxychalcone (Ch‐OMe) on GABA A Rs. EXPERIMENTAL APPROACH Whole‐cell patch‐clamp recordings were made to determine the effects of these derivatives on GABA A Rs expressed in HEK‐293 cells and in hippocampal CA1 pyramidal and thalamic neurones from rat brain. KEY RESULTS Rc‐OMe strongly potentiated GABA‐evoked currents at recombinant α 1–4 β 2 γ 2s and α 4 β 3 δ receptors but much less at α 1 β 2 and α 4 β 3 . Rc‐Br and Ch‐OMe potentiated GABA‐evoked currents at α 1 β 2 γ 2s . The potentiation by Rc‐OMe was only reduced at α 1 H101Rβ 2 γ 2s and α 1 β 2 N265Sγ 2s , mutations known to abolish the potentiation by diazepam and loreclezole respectively. The modulation of Rc‐OMe and pentobarbital as well as by Rc‐OMe and the neurosteroid 3α,21‐dihydroxy‐5α‐pregnan‐20‐one was supra‐additive. Rc‐OMe modulation exhibited no apparent voltage‐dependence, but was markedly dependent on GABA concentration. In neurones, Rc‐Br slowed the decay of spontaneous inhibitory postsynaptic currents and both Rc‐OMe and Rc‐Br positively modulated synaptic and extrasynaptic diazepam‐insensitive GABA A Rs. CONCLUSIONS AND IMPLICATIONS The trans ‐retrochalcones are powerful positive allosteric modulators of synaptic and extrasynaptic GABA A Rs. These novel modulators act through an original mode, thus making them putative drug candidates in the treatment of GABA A ‐related disorders in vivo .

  • Amino-benzosuberone: A novel warhead for selective inhibition of human aminopeptidase-N/CD13

    Sebastien Albrecht, Mira Al Lakkis-Wehbe, Alban Orsini, Albert Defoin, Patrick Pale, Emmanuel Salomon, Celine Tarnus, Jean-Marc Weibel
    Bioorganic and Medicinal Chemistry, 2011, 19 (4), pp.1434-1449. ⟨10.1016/j.bmc.2011.01.008⟩ | Publiée le 15 février 2011
    Article dans une revue

    This paper describes the design and synthesis of compounds belonging to a novel class of highly selective mammalian CD13 inhibitors. Racemic homologues of 3-amino-2-tetralone 1 were synthesised and evaluated for their ability to selectively inhibit the membrane-bound, zinc-dependent aminopeptidase-N/CD13 (EC 3.4.11.2). Some of these novel non-peptidic compounds are potent, competitive inhibitors of the mammalian enzyme, with K(i) values in the low micromolar range in spite of their minimal size (MW <200 Da). Moreover, they show an interesting selectivity profile against representative members of the aminopeptidase family, that is leucine aminopeptidase (EC 3.4.11.1), Aeromonas proteolytica aminopeptidase (EC 3.4.11.10) and the aminopeptidase activity of leukotriene A4 hydrolase (EC 3.3.2.6). The amino-benzosuberone derivative 4 is the most promising compound in terms of potency, stability and selectivity. A hypothetical binding mode of 4 to the catalytic zinc and several conserved active site residues is proposed, based on the observed structure-activity relationships, structural insights from aminopeptidase-N homologues of known three-dimensional structure. (C) 2011 Elsevier Ltd. All rights reserved.

  • A new family of peptide-nucleic acid nanostructures with potent transfection activities

    B. Bechinger, V. Vidovic, P. Bertani, A. Kichler
    J Pept Sci, 2011, 17 (2), pp.88-93. ⟨10.1002/psc.1318⟩ | Publiée le 1 février 2011
    Article dans une revue

    A family of His-rich peptides has been shown to complex DNA and efficiently deliver these nucleic acids into eukaryotic cells. Therefore, these nanoscale complexes have potential applications in gene therapy. Here, we review a number of spectroscopic and biophysical investigations aimed at characterizing the supramolecular interactions of the peptides with the nucleic acids and when overcoming the membrane barriers of the cell. Furthermore, solid-state NMR distance measurements for the first time reveal close interatomic distances between the amino acid side chains and the DNA phosphates within the transfection complex. A recent study indicates that the peptides are also potent transfectants of siRNAs and they could thereby be of potential interest for gene silencing therapies using these compounds. Copyright (c) 2010 European Peptide Society and John Wiley &amp; Sons, Ltd.

  • A Cavity-Shaped Diphosphane Displaying “Oschelating” Behavior

    Rafael Gramage-Doria, Dominique Armspach, Dominique Matt, Loic Toupet
    Angewandte Chemie International Edition, 2011, 50 (7), pp.1554-1559. ⟨10.1002/anie.201005169⟩ | Publiée le 26 janvier 2011
    Article dans une revue

    A molecular balance wheel: transition metals form with a β-cyclodextrin-derived diphosphane chelate complexes in which a fast oscillatory motion about the metal ion takes place. The observed movement occurs without metal-phosphorus bond dissociation.

  • Interaction Mechanisms between Guaiacols and Lignin: The Conjugated Double Bond Makes the Difference

    V. Daniela Barrera-García, David Chassagne, Christian Paulin, Jésus Raya, Jérôme Hirschinger, Andrée Voilley, Jean-Pierre Bellat, Régis D. Gougeon
    Langmuir, 2011, 27 (3), pp.1038-1043. ⟨10.1021/la103810q⟩ | Publiée le 7 janvier 2011
    Article dans une revue

    Lignin is considered to be responsible for a selective sorption of phenolic compounds on wood. In order to investigate the mechanisms involved, two similar guaiacol compounds—only differeing by the nature of the para side chain—were adsorbed on oak wood extracted lignin. Vapor sorption−desorption isotherms indicated that about 3.5 wt % of 4-vinylguaiacol is adsorbed near saturation whereas it is only 0.8% for 4-ethylguaiacol. For both compounds, the isotherms displayed a hysteresis though significantly greater for 4-vinylguaiacol. Analyses of the hydroxyl stretching region of FTIR spectra of the lignin/4-ethylguaiacol and lignin/4-vinylguaiacol complexes indicated that physisorption via hydrogen bonds occurs for both sorbates with lignin phenolic hydroxyl groups but which would be more condensed for the former than for the latter. According to NMR spectra, these phenolic hydroxyl groups correspond to non-etherified guaiacyl subunits. In contrast with other para substituents, the conjugated vinyl bond favors not only physisorption but also chemisorption as witnessed by the fact that upon desorption in the vapor phase, even after pumping under dynamic vacuum for several days, about 1 wt % of 4-vinylguaiacol remains adsorbed onto lignin.

  • Crystal Size-Acid Sites Relationship Study of Nano- and Micrometer-Sized Zeolite Crystals

    Benoit Louis, Aurelie Vicente, Christian Fernandez, Valentin Valtchev
    Journal of Physical Chemistry C, 2011, 115 (38), pp.18603-18610. ⟨10.1021/jp204234d⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    H/D isotope exchange was employed to quantify the total number of Bronsted acid sites present in zeolites of different crystal size. The latter method was complemented by XRD, SEM, FT-IR, multinuclear MAS NMR, and N(2) adsorption measurements to obtain an entire picture of zeolite characteristics. The acidities of two zeolite-type materials, MFI and BEA, having crystal sizes in the range 50 nm to 20 mu m (ZSM-5) and 50 nm to 2 mu m (BEA) and close Si/Al ratios were investigated in detail. The number of Bronsted add sites in the series of ZSM-5 zeolite crystals does not depend on the crystal size. In contrast, BEA nanocrystals exhibit a higher amount of OH groups than do micrometer-sized crystals, which was attributed to the intergrowth of two polymorphs and the contribution of the external surface of zeolite nanocrystallites as demonstrated by solid-state NMR analysis.

  • Synthesis and use of trans-dichlorido-tetrakis-(N-R-imidazole)nickel(II) complexes in Kumada-Tamao-Corriu cross-coupling reactions

    Neslihan Sahin, Hani El Moll, David Semeril, Dominique Matt, Ismail Ozdemir, Cemal Kaya, Loic Toupet
    Polyhedron, 2011, 30 (12), pp.2051-2054. ⟨10.1016/j.poly.2011.05.009⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    Two dichlorido-tetrakis-(N-R-imidazole)nickel(II) complexes (R = 2,6-diisopropylphenyl (1): methyl (2)) have been synthesised. A single crystal X-ray diffraction study was carried out for 1, which revealed a centrosymmetric complex with the nickel centre placed in an octahedral coordination environment. Both complexes showed high activities (TOFs up to 60200 mol(ArBr) mol(Ni)(-1) h(-1)) in Kumada-Tamao-Corriu cross-coupling of arylhalides with arylgrignards. No significant differences in activity were observed between the two complexes. (C) 2011 Elsevier Ltd. All rights reserved.

  • Lock and Key Adsorption Chemistry: Preferential Absorption of an Isomer of Di-iodobenzene on Molecular Films of Quinonoid Zwitterions

    Zhengzheng Zhang, Jose Alvira, Xenia Barbosa, Luis Rosa, Lucie Routaboul, Pierre Braunstein, Bernard Doudin, Peter Dowben
    Journal of Physical Chemistry C, 2011, 115 (6), pp.2812-2818. ⟨10.1021/jp110611u⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    We have investigated the absorption and adsorption of three isomers of di-iodobenzene on molecular films of a zwitterionic p-benzoquinonemonoimine-type molecule which is characterized by a large intrinsic dipole of 10 D. Specifically, we compared the reversible adsorption and absorption of 1,2-di-iodobenzene, 1,3-di-iodobenzene, and 1,4-di-iodobenzene on molecular films of (6Z)-4-(butylamino)-6-(butyliminio)-3-oxocyclohexa-1,4-dien-1-olate C(6)H(2)((center dot center dot center dot) over bar NHR)(2)((center dot center dot center dot) over barO)(2) where R = n-C(4)H(9). We provide unequivocal evidence that molecular adsorption and absorption of 1,3-di-iodobenzene are strongly favored at 150 K over that of the other isomers of di-iodobenzene.

  • Intercalation of tetrathiafulvalene between the two plates of a copper(I)-complexed [4]rotaxane

    J.-P. Sauvage, Y. Trolez, David Canevet, Marc Sallé
    European Journal of Organic Chemistry, 2011, pp.2413-2416. ⟨10.1002/ejoc.201100142⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    <p>The ability of a cyclic copper(I)-complexed [4]rotaxane to act as a receptor towards organic electron donors has been studied. In particular, tetrathiafulvalene (TTF), which is a flat and electron-rich molecule, forms a relatively stable complex with the rotaxane host. <sup>1</sup>H NMR spectroscopic measurements strongly suggest that the coordination mode involves intercalation of the TTF motif between the two electron-poor plates of the [4]rotaxane. By contrast, extended TTF (exTTF), which possesses π-donating ability similar to that of TTF but which is a significantly bulkier molecule due to a concave structure, was not able to form any detectable complex. This observation tends to indicate that the recognition site of the [4]rotaxane receptor is rigid and can not adapt to thick substrates.</p>

  • New heteroleptic bis-phenanthroline copper(I) complexes with dipyridophenazine or imidazole fused phenanthroline ligands: spectral, electrochemical, and quantum chemical studies

    Yann Pellegrin, Martina Sandroni, Errol Blart, A. Planchat, Michel Evain, N. Bera, M. Kayanuma, M. Sliwa, M. Rebarz, O. Poizat, C. Daniel, F. Odobel
    Inorganic Chemistry, 2011, 50, pp.11309 - 11322. ⟨10.1021/ic2006343⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    Two new sterically challenged diimine ligands <b>L<sub>1</sub></b> (2,9-dimesityl-2-(4′-bromophenyl)imidazo[4,5-<i>ƒ</i>][1,10]phenanthroline) and <b>L<sub>2</sub></b> (3,6-di-<i>n</i>-butyl-11-bromodipyrido[3,2-<i>a</i>:2′,3′-<i>c</i>]phenazine) have been synthesized with the aim to build original heteroleptic copper(I) complexes, following the HETPHEN concept developed by Schmittel and co-workers. The structure of <b>L<sub>1</sub></b> is based on a phen-imidazole molecular core, derivatized by two highly bulky mesityl groups in positions 2 and 9 of the phenanthroline cavity, preventing the formation of a homoleptic species, while <b>L<sub>2</sub></b> is a dppz derivative, bearing <i>n</i>-butyl chains in α positions of the chelating nitrogen atoms. The unambiguous formation of six novel heteroleptic copper(I) complexes based on <b>L<sub>1</sub></b>, <b>L<sub>2</sub></b>, and complementary matching ligands (2,9-R<sub>2</sub>-1,10-phenanthroline, with R = H, methyl, <i>n</i>-butyl or mesityl) has been evidenced, and the resulting compounds were fully characterized. The electronic absorption spectra of all complexes fits well with DFT calculations allowing the assignment of the main transitions. The characteristics of the emissive excited state were investigated in different solvents using time-resolved single photon counting and transient absorption spectroscopy. The complexes with ligand <b>L<sub>2</sub></b>, bearing a characteristic dppz moiety, exhibit a very low energy excited-state which mainly leads to fast nonradiative relaxation, whereas the emission lifetime is higher for those containing the bulky ligand <b>L<sub>1</sub></b>. For example, a luminescence quantum yield of about 3 × 10<sup>-</sup>4 is obtained with a decay time of about 50 ns for <b>C2</b> ([Cu<sup>I</sup>(nBu-phen)(<b>L<sub>1</sub></b>)]<sup>+</sup>) with a weak influence of strong coordinating solvent on the luminescence properties. Overall, the spectral features are those expected for a highly constrained coordination cage. Yet, the complexes are stable in solution, partly due to the beneficial π stacking between mesityl groups and vicinal phenanthroline aromatic rings, as evidenced by the X-ray structure of complex <b>C3</b> ([Cu<sup>I</sup>(Mes-phen)(L<sub>2</sub>)]<sup>+</sup>). Electrochemistry of the copper(I) complexes revealed reversible anodic behavior, corresponding to a copper(I) to copper(II) transition. The half wave potentials increase with the steric bulk at the level of the copper(I) ion, reaching a value as high as 1 V vs SCE, with the assistance of ligand induced electronic effects. <b>L<sub>1</sub></b> and <b>L<sub>2</sub></b> are further end-capped by a bromo functionality. A Suzuki cross-coupling reaction was directly performed on the complexes.

  • Substituent effects on BTP's basicity and complexation properties with Ln(III) lanthanide ions

    Gael Benay, Rachel Schurhammer, Jérémy Desaphy, Georges Wipff
    New Journal of Chemistry, 2011, 35 (1), pp.184-189 | Publiée le 1 janvier 2011
    Article dans une revue

    Bis(1,2-4 triazin-3-yl)pyridines "BTPs'' represent a new class of N-donor extracting agents that separate trivalent actinides and lanthanides from nuclear waste solutions with high An/Ln separation factors. We report here QM calculations on the effect of R-para-BTP substituents on the protonation and complexation energies of these ligands (1 : 1 and 1 : 3 complexes with Ln(III) lanthanides) in the gas phase. Both processes follow similar trends and are highly sensitive to the electron donor/acceptor character and polarizability of R. When compared to R-pyr analogues with pyridine, R-BTPs are found to be intrinsically much more basic, by ca. 20 kcal mol(-1). In aqueous solution, however (modelled by the continuum PCM model), BTPs and pyridines have a similar basicity, pointing to the importance of solvent environment on their protonation states. In the optimized Ln(R-BTP)(3)(3+) complexes with Ln = La, Eu, Yb, complexation energies E-c3 increase with the intrinsic basicity of the ligands, in the order R = NMe2 > NH2 > OMe > C6H5 > (t)Butyl > Me > H > F > Cl. Furthermore, comparison of complexes with different Ln(III) cations indicates that their stability increases in the order La-III < Eu-III < Yb-III, by the same amount with the different R-substituents. The relative contributions of central pyridinyl and lateral triazinyl nitrogens of BTPs are shown to depend on the stoichiometry of the complex and on the Ln(III) size, possibly contributing to the subtle An(III)/Ln(III) discrimination by substituted BTPs.

  • Regioselective Double Capping of Cyclodextrin Scaffolds

    Rafael Gramage-Doria, David Rodriguez-Lucena, Dominique Armspach, Coraline Egloff, Matthieu Jouffroy, Dominique Matt, Loic Toupet
    Chemistry - A European Journal, 2011, 17 (14), pp.3911-3921. ⟨10.1002/chem.201002541⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    Four different regioselective double capping reactions were applied either to alpha- or beta-cyclodextrin (CD) scaffolds. The first, which relied on the use of a rigid, bulky dialkylating reagent containing two trityl-like subunits, gave access to an A,B,D,E-tetra-functionalised beta-CD regioisomer in large scale reactions. Two further capping reactions, involving the dianions PhP2- and S2-, led to the synthesis of new C-1-symmetrical beta-cyclodextrins in which pairs of neighbouring glucose units are linked by very short spacers. The last double capping reaction described allowed the high-yield preparation of unprecedented alpha- and beta-cyclodextrins containing two sulfate handles. Proximal capping turned out to be favoured for each of the above difunctional reagents. The structural characterisation of the capped species was achieved by thorough NMR investigations as well as by single-crystal X-ray diffraction studies.

  • In Silico Design of New Ionic Liquids Based on Quantitative Structure−Property Relationship Models of Ionic Liquid Viscosity

    Isabelle Billard, G. Marcou, A. Ouadi, A. Varnek
    Journal of Physical Chemistry B, 2011, 115 (1), pp.93-98. ⟨10.1021/jp107868w⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    This work is devoted to establishing a quantitative structure-property relationship (QSPR) between the chemical structure of ionic liquids (ILs) and their viscosity followed by computer-aided design of new ILs possessing desirable viscosity. The modeling was performed using back-propagation artificial neural networks on a set of 99 ILs at 25°C, covering a large viscosity range from 3 to 800 cP. The ISIDA fragment descriptors were used to encode molecular structures of ILs. These models were first validated on 23 new ILs from Solvionic company and then used to predict the viscosity of three new ILs which then have been synthesized and tested. The models display high predictive performance in external 5-fold cross validation: determination coefficients R 2 > 0.73 and absolute mean root mean square error < 70 cP. For three ILs synthesized and tested in this work, predicted viscosities are in good qualitative agreement with the experimentally measured ones.

  • Calcium ions promote formation of amyloid beta-peptide (1-40) oligomers causally implicated in neuronal toxicity of Alzheimer's disease

    Anna Itkin, Vincent Dupres, Yves F. Dufrene, Burkhard Bechinger, J Ruysschaert, V Raussens
    PLoS ONE, 2011, 6 (3), pp.e18250. ⟨10.1371/journal.pone.0018250⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    Amyloid beta-peptide (Abeta) is directly linked to Alzheimer's disease (AD). In its monomeric form, Abeta aggregates to produce fibrils and a range of oligomers, the latter being the most neurotoxic. Dysregulation of Ca(2+) homeostasis in aging brains and in neurodegenerative disorders plays a crucial role in numerous processes and contributes to cell dysfunction and death. Here we postulated that calcium may enable or accelerate the aggregation of Abeta. We compared the aggregation pattern of Abeta(1-40) and that of Abeta(1-40)E22G, an amyloid peptide carrying the Arctic mutation that causes early onset of the disease. We found that in the presence of Ca(2+), Abeta(1-40) preferentially formed oligomers similar to those formed by Abeta(1-40)E22G with or without added Ca(2+), whereas in the absence of added Ca(2+) the Abeta(1-40) aggregated to form fibrils. Morphological similarities of the oligomers were confirmed by contact mode atomic force microscopy imaging. The distribution of oligomeric and fibrillar species in different samples was detected by gel electrophoresis and Western blot analysis, the results of which were further supported by thioflavin T fluorescence experiments. In the samples without Ca(2+), Fourier transform infrared spectroscopy revealed conversion of oligomers from an anti-parallel beta-sheet to the parallel beta-sheet conformation characteristic of fibrils. Overall, these results led us to conclude that calcium ions stimulate the formation of oligomers of Abeta(1-40), that have been implicated in the pathogenesis of AD.

  • Adventitious formation of a new oxopentadienyl Mn(I) tricarbonyl complex

    Jean-Pierre Djukic, Christophe Michon, Michel Pfeffer, Nathalie Gruber-Kyritsakas, André de Cian
    Journal of Organometallic Chemistry, 2011, 696 (20), pp.3268-3273. ⟨10.1016/j.jorganchem.2011.06.011⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    A Mn(I) tricarbonyl complex of a 1,3-diferrocenyl-1-oxopentadienyl ligand was synthesized adventitiously by what seems to be an in-situ aldol-like condensation of two acetylferrocene units promoted by benzyl-Mn(CO)5. X-ray structural anal. of this unexpected product confirms the η5 coordination of the 1,3-diferrocenyl-1-oxopentadienyl ligand to the Mn(CO)3 moiety. The nature of the metal-ligand bonding relationship was studied by theor. calcns.; it outlines the charge unbalance (polarization) at the oxopentadienyl moiety as well as the lack of ketone character of the latter Mn-bound ligand. [on SciFinder(R)]

  • Ditopic binding of cyclodextrin-included ligands in trigonal silver(I) complexes

    Dominique Armspach, Dominique Matt, Laurent Poorters, Rafael Gramage-Doria, Peter Jones, Loic Toupet
    Polyhedron, 2011, 30 (4), pp.573-578. ⟨10.1016/j.poly.2010.11.014⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    The X-ray crystal structures of trigonal silver(1) cyclodextrin complexes of introverted bidentate sulfur (1) and phosphorus (2) ligands give a clear indication on how a cyclodextrin-included ligand may bind in a ditopic fashion both the encapsulated metal ion and the cyclodextrin inner wall. In the solid state, the silver-coordinated water molecule of complex [Ag(H2O)(1)]BF4 induces a major distortion of the macrocyclic structure, along with dramatic conformational changes in the two opposite glucose units with which it is hydrogen bonded. In complex [AgBr(2)], the included bulky bromide anion, which lacks hydrogen bonding capability, does not affect the overall circular shape of the cyclodextrin receptor. A H-1-F-19 HOESY experiment conducted on the silver(I) complex of 1 in CDCl3 showed that in this solvent, the water molecule is displaced by the BF4 counterion at the metal coordination site, the cavity being here no longer distorted. (C) 2010 Elsevier Ltd. All rights reserved.

  • Crystal structure of trichlorooxo-17-bis[(diphenylphosphoryl)methyl]-4(24),6(10),12(16),18( 22)-tetramethylenedioxy-2,8,14,20-tetrapentylresorcin[4]areneuranium(V ) - dichlorodioxo-17-bis[(diphenylphosphoryl)methyl]-4(24),6(10),12(16),18 (22)- tetramethylenedioxy-2,8,14,20-tetrapentylresorcin[4]areneuranium(VI) - hexane (1:3:3), UCl3O(C78H86O10P2)center dot 3UCl(2)O(2)(C78H86O10P2)center dot 3C(6)H(14)

    Hani El Moll, David Semeril, Dominique Matt, Loic Toupet
    Zeitschrift für Kristallographie - New Crystal Structures, 2011, 226 (1), pp.91-96. ⟨10.1524/ncrs.2011.0044⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    Ci(65)H(193)CL(4.36)O(23.64)P(4)U(2), triclinic, P (1) over bar (no. 2), a = 15.495(1) angstrom, b = 18.855(2) angstrom, c =30.532(3) angstrom, alpha = 90.717(9)degrees, beta = 101.253(7)degrees, gamma = 109.575(9)degrees, V = 8213.9 angstrom(3), Z = 2, R-gt(F)= 0.055, wR(ref)(F-2)= 0.152, T= 110 K.

  • Crystal structure of 5-(imidazol-1-yl)-25,26,27,28-tetra-benzyloxy-calix[4]arene (cone), C59H50N2O4

    Eric Brenner, Dominique Matt, Loic Toupet
    Zeitschrift für Kristallographie - New Crystal Structures, 2011, 226 (4), pp.450-452. ⟨10.1524/ncrs.2011.0201⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    C59H50N2O4, monoclinic, P2(1)/n (no. 14), a = 19.028(3) angstrom, b = 12.605(1) angstrom, c = 20.943(3) angstrom, beta = 114.91(2)degrees, V = 4555.9 angstrom(3), Z = 4, R(F) = 0.043, wR(ref)(F-2) = 0.085, T = 140 K.

  • Tuning the conversion of cyclohexane into cyclohexanol/one by molecular dioxygen, protons and reducing agents at a single non-porphyrinic iron centre and chemical versatility of the tris(2-pyridylmethyl)amine TPAFe II Cl 2 complex in mild oxidation chemistry †

    Hassen Jaafar, Bertrand Vileno, Aurore Thibon, Dominique Mandon
    Dalton Transactions, 2011, 40 (1), pp.92-106. ⟨10.1039/c0dt00756k⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    We report that the oxygen sensitivity of some Fe(II) complexes with tripodal ligands can be used, with benefit, in the oxidation of cyclohexane under mild conditions. Depending on the solvent, two very different reaction pathways are involved, which share the coordination of O 2 to the metal as the common initial step. We have synthesized a series of a-chlorinated tripods in the tris(2-pyridylmethyl)amine series Cl n TPA (n = 1-3) and fully characterized the corresponding FeX 2 complexes (X = Cl, CF 3 SO 3). The single-crystal X-ray structure analyses of the FeCl 2 complexes are reported. In CH 3 CN, the FeCl 2 complexes react smoothly with O 2 , whereas the Fe(CF 3 SO 3) 2 complexes are non-sensitive. In CH 3 CN, the reaction of the oxygen-sensitive Cl n TPAFeCl 2 (n = 0-3) with O 2 , acetic acid and zinc amalgam, in the presence of cyclohexane, affords a mixture of cyclohexanol/one in an ª ol/one ratio of 3.1 and a selectivity of the C3 • /C2 • in the adamantane conversion that is consistent with a metal-oxo based oxidation. Limited efficiency (ª 2 TON) was observed for the parent TPAFeCl 2 complex and Cl 1 TPAFeCl 2 , whereas both other complexes turned out to be poorly active. The TPAFeCl 2 complex was used to address mechanistic questions: when the reaction was carried out in pyridine, the ol/one ratio shifted to 0.15 while efficiency was improved by 7-fold. In pyridine and in the presence of a spin trap (DMPO), the radical-based character of the reaction was definitely established, by contrast with acetonitrile, where no oxygenated radicals were detected. Thus, the reactivity differences arise from involvement of two distinct active species. The dichotomous radical/biomimetic pathway is discussed to interpret these results.

  • Elucidating mechanisms in haem copper oxidases: the high-affinity QH binding site in quinol oxidase as studied by DONUT-HYSCORE spectroscopy and density functional theory

    Fraser Macmillan, Sylwia Kacprzak, Petra Hellwig, Stephane Grimaldi, Hartmut Michel, Martin Kaupp
    Faraday Discussions, 2011, 148, ⟨10.1039/c005149g⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    The Cytochrome bo3 ubiquinol oxidase (QOX) from Escherichia coli (E. coli) contains a redox-active quinone, the so-called "high-affinity" QH quinone. The location of this cofactor and its binding site has yet to be accurately determined by X-ray crystallographic studies. Based on site-directed mutagenesis studies, a putative quinone binding site in the protein has been proposed. The exact binding partner of this cofactor and also whether it is stabilised as an anionic semiquinone or as a neutral radical species is a matter of some speculation. Both Hyperfine Sub-level Correlation (HYSCORE) and Double Nuclear Coherence Transfer Spectroscopy (DONUT-HYSCORE) spectroscopy as well as density functional theory (DFT) have been applied to investigate the QH binding site in detail to resolve these issues. Use is made of site-directed variants as well as globally 15N/14N-exchanged protein. Comparison of computed and experimental 13C hyperfine tensors provides strong support for the binding of the semiquinone radical in an anionic rather than a neutral protonated form. These results are compared with the corresponding information available on other protein binding sites and/or on model systems and are discussed with regard to the location and potential function of QH in the overall mechanism of function of this family of haem copper oxidases.

  • Intramolecular d10–d10 interactions in heterometallic clusters of the transition metals

    Sabrina Sculfort, Pierre Braunstein
    Chemical Society Reviews, 2011, 40 (5), pp.2741-2760. ⟨10.1039/c0cs00102c⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    Weak attractive interactions between closed shell metal ions have been increasingly studied in the last few years and are generally designated as metallophilic interactions. They are best evidenced in the solid state where structural data obtained by X-ray diffraction provide precise information about the distance between the metals involved. The strength of such metal–metal interactions has been compared to that of hydrogen bonding (ca. 7–11 kcal mol−1) and is clearly sufficient to bring about novel bonding and structural features and confer interesting physical properties such as luminescence, polychromism, magnetism or one-dimensional electrical conductivity. The Cu(I)–Cu(I), Ag(I)–Ag(I) and Au(I)–Au(I) interactions have been increasingly observed and the latter have certainly been the most studied. Early qualitative analyses of the aurophilic attraction focused on Au–Au bonding originating from 6s, 6p and 5d orbital mixing. Numerous theoretical studies on metallophilic interactions continue to be carried out at various levels of sophistication which take into account relativistic and correlation effects to describe these van der Waals-type interactions. In this critical review, we would like to focus on the synthesis and structures of heterometallic clusters of the transition metals in which intra- rather than intermolecular d10–d10 interactions are at work, in order to limit the role of packing effects. We wish to provide the reader with a comparative overview of the metal core structures resulting from or favoring metallophilic interactions but do not intend to provide a comprehensive coverage of the literature. We will first examine heterometallic clusters displaying homometallic and then heterometallic d10–d10 interactions. Although the focus of this review is on d10–d10 interactions involving metals from the group 11, we shall also briefly examine for comparison some complexes displaying intramolecular d10–d10 interactions involving metals from other groups (188 references).

  • Electrosynthesis and electrochemical properties of porphyrin dimers with pyridinium as bridging spacer

    Delphine Schaming, Sonia Marggi-Poullain, Iftikhar Ahmed, Rana Farha, Michel Goldmann, Jean-Paul Gisselbrecht, Laurent Ruhlmann
    New Journal of Chemistry, 2011, 35 (11), pp.2534-2543. ⟨10.1039/c1nj20177h⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    Two porphyrin dimers (more precisely two isomers) with pyridinium as bridging spacer have been obtained by controlled potential electrolysis. This method is based on a nucleophilic substitution of a porphyrin substituted by a pyridyl group (namely 5,10,15-tritolyl-20-(4-pyridyl) porphyrin (H(2)T(3)P-4-Py) or 5,10,15-tritolyl-20-(3-pyridyl) porphyrin (H(2)T(3)P-3-Py)) on an electrogenerated radical cation of a zinc beta-octaethylporphyrin (ZnOEP). The new compounds have been characterized by HR-MS, (1)H NMR, UV-vis and fluorescence spectroscopies. Difference of electrochemical behaviour of the pyridinium spacers between the two dimers has been also discussed.

  • Cation-Cation "Attraction": When London Dispersion Attraction Wins over Coulomb Repulsion

    Stefan Grimme, Jean-Pierre Djukic
    Inorganic Chemistry, 2011, 50 (6), pp.2619-2628. ⟨10.1021/ic102489k⟩ | Publiée le 1 janvier 2011
    Article dans une revue

    London forces are omnipresent in nature and relevant to mol. engineering. Proper tuning of their energetic contribution may stabilize mol. aggregates, which would be otherwise highly unstable by virtue of other overwhelming repulsive terms. The literature contains a no. of such noncovalently bonded mol. aggregates, of which the "binding mode" has never been thoroughly settled. Among those are the emblematic cationic complexes of tetrakis(isonitrile)rhodium(I) studied by a no. of researchers. The propensity of these complexes to spontaneously produce oligomers has been an "open case" for years. For the dimer [(PhNC)4Rh]22+, one of the archetypes of such oligomers, d. functional theory methods (DFT-D3) and wave function based spin-component-scaled second-order Moller-Plesset perturbation theory (SCS-MP2) quantum chem. calcns. indicate that when the eight isonitrile ligands arrange spatially in an optimal π-stacked fashion, the energy due to dispersion not only overcomes Coulombic repulsion but also the entropy penalty of complex formation. This central role of long-range electron correlation explains such cation-cation attractive interactions. Furthermore, the present findings relativize the role of the metal-metal "d8-d8" interactions, which are present on a relatively small scale compared to the effects of the ligands; d8-d8 interactions represent about 10-15% of the total dispersion contribution to the binding energy. [on SciFinder(R)]

  • The Putative Assembly Factor CcoH Is Stably Associated with the cbb 3 -Type Cytochrome Oxidase

    Grzegorz Pawlik, Carmen Kulajta, Ilie Sachelaru, Sebastian Schröder, Barbara Waidner, Petra Hellwig, Fevzi Daldal, Hans-Georg Koch
    Journal of Bacteriology, 2010, 192 (24), pp.6378-6389. ⟨10.1128/JB.00988-10⟩ | Publiée le 15 décembre 2010
    Article dans une revue

    ABSTRACT Cytochrome oxidases are perfect model substrates for analyzing the assembly of multisubunit complexes because the need for cofactor incorporation adds an additional level of complexity to their assembly. cbb 3 -type cytochrome c oxidases ( cbb 3 -Cox) consist of the catalytic subunit CcoN, the membrane-bound c -type cytochrome subunits CcoO and CcoP, and the CcoQ subunit, which is required for cbb 3 -Cox stability. Biogenesis of cbb 3 -Cox proceeds via CcoQP and CcoNO subcomplexes, which assemble into the active cbb 3 -Cox. Most bacteria expressing cbb 3 -Cox also contain the ccoGHIS genes, which encode putative cbb 3 -Cox assembly factors. Their exact function, however, has remained unknown. Here we analyzed the role of CcoH in cbb 3 -Cox assembly and showed that CcoH is a single spanning-membrane protein with an N-terminus-out-C-terminus-in (N out -C in ) topology. In its absence, neither the fully assembled cbb 3 -Cox nor the CcoQP or CcoNO subcomplex was detectable. By chemical cross-linking, we demonstrated that CcoH binds primarily via its transmembrane domain to the CcoP subunit of cbb 3 -Cox. A second hydrophobic stretch, which is located at the C terminus of CcoH, appears not to be required for contacting CcoP, but deleting it prevents the formation of the active cbb 3 -Cox. This suggests that the second hydrophobic domain is required for merging the CcoNO and CcoPQ subcomplexes into the active cbb 3 -Cox. Surprisingly, CcoH does not seem to interact only transiently with the cbb 3 -Cox but appears to stay tightly associated with the active, fully assembled complex. Thus, CcoH behaves more like a bona fide subunit of the cbb 3 -Cox than an assembly factor per se .

  • Progress toward a first observation of parity violation in chiral molecules by high-resolution laser spectroscopy

    Benoît Darquié, Clara Stoeffler, Alexander Shelkovnikov, Christophe Daussy, Anne Amy-Klein, Christian Chardonnet, Samia Zrig, Laure Guy, Jeanne Crassous, Pascale Soulard, Pierre Asselin, Therese R. Huet, Peter Schwerdtfeger, Radovan Bast, Trond Saue
    Chirality, 2010, 22 (10), pp.870-884. ⟨10.1002/chir.20911⟩ | Publiée le 1 novembre 2010
    Article dans une revue

    Parity violation (PV) effects in chiral molecules have so far never been experimentally observed. To take this challenge up, a consortium of physicists, chemists, theoreticians and spectroscopists has been established and aims at measuring PV energy differences between two enantiomers by using high-resolution laser spectroscopy. In this article, we present our common strategy to reach this goal, the progress accomplished in the diverse areas, and point out directions for future PV observations. The work of André Collet on bromochlorofluoromethane enantiomers, their synthesis and their chiral recognition by cryptophanes made feasible the first generation of experiments presented in this paper.

  • Insertion of indigo molecules in the sepiolite structure as evidenced by H-1-Si-29 heteronuclear correlation spectroscopy

    Jesus Raya, Jerôme Hirschinger, Sonia Ovarlez, Francoise Giulieri, Anne-Marie Chaze, François Delamare
    Physical Chemistry Chemical Physics, 2010, 12 (43), pp.Pages 14508-14514. ⟨10.1039/C0CP00834F⟩ | Publiée le 1 novembre 2010
    Article dans une revue

    Despite the numerous studies of the famous indigo-based pigment Maya Blue, there are still many questions regarding the elucidation of its structure. Here, two-dimensional (2D) H-1-Si-29 heteronuclear correlation (HETCOR) spectroscopy with frequency-switched Lee-Goldburg (FSLG) homonuclear decoupling is applied to sepiolite and sepiolite-indigo complexes. Owing to the high resolution in the H-1 dimension of the 2D H-1-Si-29 HETCOR spectrum obtained by FSLG homonuclear decoupling, the assignment of the Si-29 cross-polarization magic-angle spinning (CPMAS) spectrum of sepiolite is clearly confirmed. Moreover, 2D H-1-Si-29 FSLG-HETCOR spectroscopy gives the first direct evidence that some indigo molecules are inserted in the sepiolite structure whereas no interaction between indigo and the external side surface (silanol groups) is observed in the Si-29 CPMAS spectra. These results are consistent with the fact that indigo molecules interact with water coordinated to magnesium and suggest that Maya Blue made from sepiolite is not a surface complex.

  • Ruthenacycles and Iridacycles as Catalysts for Asymmetric Transfer Hydrogenation and Racemisation

    Thomas Jerphagnon, Robert Haak, Florian Berthiol, Arnaud Gayet, Vincent Ritleng, Alexandre Holuigue, Nicolas Pannetier, Michel Pfeffer, Adeline Voelklin, Laurent Lefort, Gerard Verzijl, Chiara Tarabiono, Dick Janssen, Adriaan Minnaard, Ben Feringa, Johannes de Vries
    Topics in Catalysis, 2010, 53 (15-18), pp.1002-1008. ⟨10.1007/s11244-010-9569-6⟩ | Publiée le 1 septembre 2010
    Article dans une revue

  • Probing the Hydrogen Bonding Structure in the Rieske Protein

    Youssef El Khoury, Aurélien Trivella, Julien Gross, Petra Hellwig
    ChemPhysChem, 2010, 11 (15), pp.3313-3319. ⟨10.1002/cphc.201000331⟩ | Publiée le 24 août 2010
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    Abstract The use of the far‐infrared spectral range presents a novel approach for analysis of the hydrogen bonding in proteins. Here it is presented for the analysis of FeS vibrations (500–200 cm −1 ) and of the intra‐ and intermolecular hydrogen bonding signature (300–50 cm −1 ) in the Rieske protein from Thermus thermophilus as a function of temperature and pH. Three pH values were adequately chosen in order to study all the possible protonation states of the coordinating histidines. The FeS vibrations showed pH‐dependent shifts in the FIR spectra in line with the change of protonation state of the histidines coordinating the [2Fe2S] cluster. Measurements of the low‐frequency signals between 300 and 30 K demonstrated the presence of a distinct overall hydrogen bonding network and a more rigid structure for a pH higher than 10. To further support the analysis, the redox‐dependent shifts of the secondary structure were investigated by means of an electrochemically induced FTIR difference spectroscopic approach in the mid infrared. The results confirmed a clear pH dependency and an influence of the immediate environment of the cluster on the secondary structure. The results support the hypothesis that structure‐mediated changes in the environment of ironsulfur centers play a critical role in regulating enzymatic catalysis. The data point towards the role of the overall internal hydrogen bonding organization for the geometry and the electronic properties of the cluster.

  • Nanoscale Precipitation Coating: The Deposition of Inorganic Films through Step-by-Step Spray-Assembly

    Gabriela Popa, Fouzia Boulmedais, Peng Zhao, Joseph Hemmerlé, Loïc Vidal, Eric Mathieu, Olivier Félix, Pierre Schaaf, Gero Decher, Jean-Claude Voegel
    ACS Nano, 2010, 4 (8), pp.4792-4798. ⟨10.1021/nn1005667⟩ | Publiée le 24 août 2010
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    Thin films and surface coatings play an important role in basic and applied research. Here we report on a new, versatile, and simple method ("precipitation coating") for the preparation of inorganic films, based on the alternate spraying of complementary inorganic salt solutions against a receiving surface on which the inorganic deposit forms. The method applies whenever the solubility of the deposited material is smaller than that of the salts in the solutions of the reactants. The film thickness is controlled from nanometers to hundreds of micrometers simply by varying the number of spraying steps; 200 spray cycles, corresponding to less than 15 min deposition time, yield films with thicknesses exceeding one micrometer and reaching tens of micrometers in some cases. The new solution-based process is also compatible with conventional layer-by-layer assembly and permits the fabrication of multimaterial sandwich-like coatings.

  • Linear complex polarization propagator in a four-component Kohn-Sham framework.

    Sebastien Villaume, Trond Saue, Patrick Norman
    The Journal of Chemical Physics, 2010, 133 (6), pp.064105. ⟨10.1063/1.3461163⟩ | Publiée le 14 août 2010
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    An algorithm for the solution of the linear response equation in the random phase approximation is presented. All entities including frequency arguments, matrices, and vectors, are assumed to be complex, and it represents the core equation solver needed in complex polarization propagator approaches where nonstimulated relaxation channels are taken into account. Stability and robustness of the algorithm are demonstrated in applications regarding visible, ultraviolet, and x-ray spectroscopies. An implementation of the algorithm at the level of four-component relativistic, noncollinear, density functional theory for imaginary (but not complex) frequency arguments has been achieved and is used to determine the electric dipole dispersion interaction coefficients for the rubidium and cesium dimers. Our best estimates for the C(6) coefficients of Rb(2) and Cs(2) are equal to 14.0x10(3) and 21.9x10(3) a.u., respectively.

  • BTP-based ligands and their complexes with Eu3+ at “oil”/water interfaces. A molecular dynamics study

    Gael Benay, Rachel Schurhammer, Georges Wipff
    Physical Chemistry Chemical Physics, 2010, 12 (36), pp.11089. ⟨10.1039/C000772B⟩ | Publiée le 30 juillet 2010
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    <div><p>Heterocyclic N-donor ligands based on the Bistriazinylpyridine (BTPs) skeleton have been recently developed to separate trivalent actinides from lanthanides by liquidliquid extraction from nuclear solutions. In this paper, we report molecular dynamics investigations on BTPs in water -"oil" biphasic systems (oil = hexane + octanol vs hexane vs nitrobenzene vs chloroform) and compare different BTP derivatives, their neutral vs protonated forms, and their 1:3 complexes with Eu (III) . Neutral BTPs are found to be weakly surface active and to display multiple orientations at the interface, depending on time and on their lateral and para substituents. This contrasts with their protonated forms that strongly adsorb at interfaces with neutral or acidic water. Remarkably, the protonated cyMe4-BTPH + and, to a lesser extent, i PrBTPH + ligands adopts at the interface an "inversed orientation", where NH + points towards oil, instead of water. The [Eu(BTP)3] 3+ complexes are also found to be highly surface active: in spite of Eu (III) shielding by the three ligands, these complexes remain strongly attracted by water at the aqueous side of the interface. Taken together, the MD results suggest that ion complexation by BTPs occurs right at the interface, from the protonated BTPH + forms. They may explain why extraction is improved upon increase of the aqueous phase acidity, with a slow kinetics, though. They also open perpectives to design new derivatives for efficient separation of trivalent actinides from lanthanides.</p></div>

  • Relativistic four- and two-component calculations of parity violation effects in chiral tungsten molecules of the form NWXYZ (X, Y, Z = H, F, Cl, Br, or I).

    Detlev Figgen, Trond Saue, Peter Schwerdtfeger
    The Journal of Chemical Physics, 2010, 132 (23), pp.234310. ⟨10.1063/1.3439692⟩ | Publiée le 21 juin 2010
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    Parity violation (PV) effects to the electronic ground state structure for a series of chiral tungsten molecules of the type NWXYZ (X, Y, Z = H, F, Cl, Br, or I) are compared using four- (Dirac) and two- (X2C) component relativistic Hartree-Fock and density functional theories. The results show the computationally more affordable two-component X2C approach yields accurate results for all molecules investigated. The PV energy differences between the two enantiomers range from as little as 0.4 Hz for NWClBrI to 140 Hz for NWHClI using a generalized gradient approximation including exact exchange (B3LYP). The W-N stretching mode in these molecules lies in the experimentally favorable CO(2) laser frequency range, and we therefore investigated PV effects in vibrational transitions using a single normal mode analysis. Here the PV frequency shift between the two enantiomers ranges from 1.6 mHz for NWFBrI to 710 mHz for NWHClI. Thus these types of molecules could be useful for the future detection of PV effects in chiral molecules.

  • Incorporation of 2,3-Diaminopropionic Acid into Linear Cationic Amphipathic Peptides Produces pH-Sensitive Vectors

    Yun Lan, Vincenzo Abbate, Berangere Bertin, Louic Vermeer, Xiaole Kong, Kelly Sullivan, Christian Leborgne, Daniel Scherman, Robert Hider, Alex Drake, Sukhvinder Bansal, Antoine Kichler, a James Mason, Bérangère Lan, A. James Mason
    ChemBioChem, 2010, 11 (9), pp.1266-1272. ⟨10.1002/cbic.201000073⟩ | Publiée le 14 juin 2010
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    Nonviral vectors that harness the change in pH in endosomes, are increasingly being used to deliver cargoes, including nucleic acids, into mammalian cells. Here we present evidence that the pK(a) of the beta-NH(2) in 2,3-diaminopropionic acid (Dap) is sufficiently lowered, when Dap is incorporated into peptides, that its protonation state is sensitive to the pH changes that occur during endosomal acidification. The lowered pK(a) of around 6.3 is stabilized by the increased electron-withdrawing effect of the peptide bonds, by intermolecular hydrogen bonding and from contributions arising from the peptide conformation. These include mixed polar/apolar environments, Coulombic interactions and intermolecular hydrogen bonding. Changes in the charged state are therefore expected between pH 5 and 7, and large-scale conformational changes are observed in Dap-rich peptides, in contrast to analogues containing lysine or ornithine, when the pH is altered through this range. These physical properties confer a robust gene-delivery capability on designed cationic amphipathic peptides that incorporate Dap.

  • Structural basis for the non-immunosuppressive character of the cyclosporin A analogue Debio 025.

    Isabelle Landrieu, Xavier Hanoulle, Fanny Bonachera, Arnaud Hamel, Nathalie Sibille, Yanxia Yin, Jean-Michel Wieruszeski, Dragos Horvath, Qun Wei, Grégoire Vuagniaux, Guy Lippens
    Biochemistry, 2010, 49 (22), pp.4679-86. ⟨10.1021/bi1003266⟩ | Publiée le 8 juin 2010
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    Debio 025 is a cyclosporin A (CsA) analogue that interferes strongly with the hepatitis C viral life cycle. Compared to CsA, Debio 025 has an additional methyl group at position 3 of the cyclic undecapeptide and an N-ethylvaline instead of an N-methylleucine at position 4. Unlike CsA, Debio 025 lacks immunosuppressive activity in vitro and in vivo. We show here that, in vitro, the cyclophilin A (CypA)-Debio 025 complex cannot interact any longer with calcineurin (CaN), a determinant for the immunosuppressive activity of CsA. We further use NMR spectroscopy to investigate at the molecular level the interaction of Debio 025 with CypA and thereby understand the basis for this loss of CaN interaction. NMR data and molecular modeling indicate that Debio 025 optimally interacts with CypA, which underlies the anti-HCV properties of Debio 025. However, the interaction between CaN and the CypA-Debio 025 complex is impeded by sterical hindrance of the CaN with the side chain of its Val4 residue. This is in sharp contrast with the case for the CypA-CsA-CaN ternary complex, where the Leu4 side chain can enter a hydrophobic cavity at the CaN interface. The structure of the CypA-Debio 025 complex thus provides a rational explanation for the non-immunosuppressive character of Debio 025.

  • Reversible liposome association induced by LAH4: a peptide with potent antimicrobial and nucleic acid transfection activities.

    Arnaud Marquette, Bernard Lorber, Burkhard Bechinger
    Biophysical Journal, 2010, 98 (11), pp.2544-53. ⟨10.1016/j.bpj.2010.02.042⟩ | Publiée le 2 juin 2010
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    We report on the reversible association of anionic liposomes induced by an antimicrobial peptide (LAH4). The process has been characterized for mixed membranes of POPC and POPS at molar ratios of 1:1, 3:1, and 9:1. Although the vesicles remain in suspension in the presence of excess amounts of peptide, the addition of more lipids results in surface charge neutralization, aggregation of the liposomes, and formation of micrometer-sized structures that coexist in equilibrium with vesicles in suspension. At low ratios of anionic lipids, vesicle aggregation is a reversible process, and vesicle disassembly is observed upon inversion of the surface charge by further supplementation with anionic vesicles. In contrast, a different process, membrane fusion, occurs in the presence of high phosphatidylserine concentrations. Upon binding to membranes containing low POPS concentrations, the peptide adopts an in-plane alpha-helical structure, a secondary structure that is conserved during vesicle association and dissociation. Our finding that peptides are essential for vesicle aggregation contributes to a better understanding of the activity of antimicrobial peptides, and suggests an additional layer of complexity in membrane-protein lipid interactions.

  • Solid-State NMR Spectroscopy of Oriented Membrane Polypeptides at 100 K with Signal Enhancement by Dynamic Nuclear Polarization

    Evgeniy Sergeevich Salnikov, Mélanie Rosay, Shane Pawsey, Olivier Ouari, Paul Tordo, Burkhard Bechinger
    Journal of the American Chemical Society, 2010, 132 (17), pp.5940--+. ⟨10.1021/ja1007646⟩ | Publiée le 1 mai 2010
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    Oriented membrane samples encompassing the biradical bTbK and a transmembrane peptide carrying a single (15)N labeled residue have been prepared on polymer sheets with sample geometries that fit into a 3.2 mm MAS rotor. The proton-decoupled (15)N cross-polarization spectra of the peptide were characterized by a single line at fast magic angle spinning speeds of similar to 8 kHz. Irradiating these samples with p-waves resulted in Dynamic Nuclear Polarization and a concomitant 18-fold signal enhancement which considerably shortened the NMR acquisition times. Furthermore, the sideband patterns of magic angle oriented sample spinning (MAOSS) solid-state NMR spectra at slow spinning speeds (similar to 1 kHz) are indicative that the lipids and peptides form well-oriented bilayers at 100 K despite the narrow inner diameter of the rotor (2.2 mm) and the presence of considerable amounts of biradicals. The DNP signal enhancement opens up enhanced possibilities for multidimensional solid-state NMR investigation of oriented membrane polypeptides.

  • Chain-like" trimetallic ruthenium complexes with C7 carbon-rich bridges: experimental and theoretical investigations of electronic communication tuning in five distinct oxidation states.

    Céline Olivier, Karine Costuas, Sylvie Choua, Vincent Maurel, Philippe Turek, Jean-Yves Saillard, Daniel Touchard, Stéphane Rigaut
    Journal of the American Chemical Society, 2010, 132 (16), pp.5638-51. ⟨10.1021/ja908948g⟩ | Publiée le 28 avril 2010
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    In this work, we report the synthesis and the electronic properties of the unique highly conjugated molecular wires trans-[Cl-(dppe)(2)Ru=C=C=(Ph)C-CH=(CH(3))C-C[triple bond]C-(X)(2)Ru-C=C-C(CH(3))=CH-C(Ph)=C=C=Ru(dppe)(2)Cl](n+) (n = 2, X = dppe ([3a](OTf)(2)) and dppm ([3b](OTf)(2)) with three similar metal centers spanned by two odd-numbered unsaturated C(7) chains providing a 28 A long conjugated path and displaying five well-separated redox states (n = 0-4). Successive one-electron transfer steps were studied by means of cyclic voltammetry, EPR and UV-vis-NIR-IR spectroelectrochemistry. The electronic and physical properties of the different states were further rationalized with the help of DFT-based calculations. Upon one-electron reduction (n = 1), the single electron is delocalized over the two carbon chains through the central metal atom to an extent driven by the rotations within and between the chains. The second reduction (n = 0) involves the whole carbon-rich conjugated path of the molecule in a spin polarized scheme: one electron is delocalized over each chain, and the two electrons are antiferromagnetically coupled with a coupling on the order of kT. Interestingly, oxidation processes strongly involve both the metal atoms and the bridging ligands. The combined investigations reveal that the mono-oxidized system (n = 3) presents a spin density uniformly distributed between the metal atoms and the carbon atoms of the chains, whereas in the second oxidation state (n = 4) the compounds show a strong antiferromagnetic coupling on the order of 4 kT between the two single electrons localized in two distinct delocalized spin orbitals implying all the carbon atoms of the bridges and the three metal atoms. Thus, for the first time, electronic communication was fully evidenced and tuned in homonuclear trimetallic oligomeric carbon-rich systems in either an oxidation or a reduction process.

  • Coordination studies of bis-strapped-hanging-carboxylate porphyrins. X-ray characterization of a five-coordinate iron(II) complex with a built-in axial base.

    Ismail Hijazi, Thierry Roisnel, Marc Fourmigué, Jean Weiss, Bernard Boitrel
    Inorganic Chemistry, 2010, 49 (7), pp.3098-100. ⟨10.1021/ic1001072⟩ | Publiée le 5 avril 2010
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    The comparison of two series of preorganized strapped porphyrins, derived from both the alphabetaalphabeta and alphaalphabetabeta conformers of meso-tetrakis(aminophenyl)porphyrin, and the coordination studies of their affinity for O(2) are reported. Both series of ligands bear a proximal built-in axial base and a polar distal side defined by either a hanging malonyl ester or a hanging malonic acid residue. In the alphabetaalphabeta model, the carboxylic acid groups are maintained in an apical location at a fixed distance from the distal oxygen atom of iron-bound O(2). A particular emphasis is placed on the alphaalphabetabeta series, for which the crystal structure of the five-coordinate (S = 2) iron(II) ester complex was determined. In this series, the distal strap can adopt either a tilted conformation or a vertical position over the Fe(II) core, allowing changes in the distance between the carboxylic groups and the bound O(2).

  • The 9th-Century-AD Belitung Wreck, Indonesia: analysis of a resin lump

    Pauline Burger, Armelle Charrié-Duhaut, Jacques Connan, Pierre Albrecht, Michael Flecker
    International Journal of Nautical Archaeology, 2010, ⟨10.1111/j.1095-9270.2010.00263.x⟩ | Publiée le 1 avril 2010
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    The 9th‐century‐AD Belitung wreck was discovered in 1998 in the Java Sea. Construction techniques rapidly confirmed that it was unlike any known Chinese or Southeast Asian vessel. The uncertainty about its origins was resolved in 2008 by timber identifications: it was constructed in the Middle East (probably Oman or Yemen). This paper, on the characterization of a dammar resin lump collected in the vicinity of the wreck, supplies additional evidence confirming the probable re‐stitching of the vessel somewhere in Asia.

  • Coordination Chemistry-Assembled Porphyrinic Catenanes

    Maryline Beyler, Valérie Heitz, Jean-Pierre Sauvage
    Journal of the American Chemical Society, 2010, 132 (12), pp.4409 - 4417. ⟨10.1021/ja910747h⟩ | Publiée le 31 mars 2010
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    Non covalent [2]catenanes were synthesized in high yield as kinetic products or as thermodynamic products after completion of an equilibrium. These sophisticated architectures were assembled in two steps, from an oblique bis-zinc(II) porphyrin and two different dipyridyl chelates, by using Cu(I)−N interactions to assemble acyclic complexes and Zn(II)−N interactions to generate rings. 1H NMR including 2D COSY and ROESY experiments were used to characterize each compound. Spectrophotometric titrations highlight the influence of geometry in terms of distances and angles in non covalent coordinated assemblies. In fact, it was proved that a perfect fit leads to highly stable coordination chemistry-assembled species.

  • Far infrared spectra of solid state aliphatic amino acids in different protonation states.

    Aurélien Trivella, Thomas Gaillard, Roland H Stote, Petra Hellwig
    The Journal of Chemical Physics, 2010, 132 (11), pp.115105. ⟨10.1063/1.3356027⟩ | Publiée le 21 mars 2010
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    Far infrared spectra of zwitterionic, cationic, and anionic forms of aliphatic amino acids in solid state have been studied experimentally. Measurements were done on glycine, L-alanine, L-valine, L-leucine, and L-isoleucine powder samples and film samples obtained from dried solutions prepared at pH ranging from 1 to 13. Solid state density functional theory calculations were also performed, and detailed potential energy distributions were obtained from normal mode results. A good correspondence between experimental and simulated spectra was achieved and this allowed us to propose an almost complete band assignment for the far infrared spectra of zwitterionic forms. In the 700-50 cm(-1) range, three regions were identified, each corresponding to a characteristic set of normal modes. A first region between 700 and 450 cm(-1) mainly contained the carboxylate bending, rocking, and wagging modes as well as the ammonium torsional mode. The 450-250 cm(-1) region was representative of backbone and sidechain skeletal bending modes. At last, the low wavenumber zone, below 250 cm(-1), was characteristic of carboxylate and skeletal torsional modes and of lattice modes. Assignments are also proposed for glycine cationic and anionic forms, but could not be obtained for all aliphatic amino acids due to the lack of structural data. This work is intended to provide fundamental information for the understanding of peptides vibrational properties.

  • E6 Proteins from Diverse Papillomaviruses Self-Associate Both In Vitro and In Vivo

    Katia Zanier, Christine Ruhlmann, Frédéric Melin, Murielle Masson, Abdellahi Ould M'Hamed Ould Sidi, Xavier Bernard, Benoit Fischer, Laurent Brino, Tutik Ristriani, Vladimir Rybin, Mireille Baltzinger, Scott Vande Pol, Petra Hellwig, Patrick Schultz, Gilles Travé
    Journal of Molecular Biology, 2010, 396 (1), pp.90-104. ⟨10.1016/j.jmb.2009.11.022⟩ | Publiée le 1 février 2010
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    Papillomavirus (PV) E6 oncoproteins bind and often provoke the degradation of many cellular proteins important for the control of cell proliferation and/or cell death. Structural studies on E6 proteins have long been hindered by the difficulties of obtaining highly concentrated samples of recombinant E6. Here we show that recombinant E6 proteins from eight human and one bovine PV strains exist as oligomeric as well as multimeric species. These species were characterized using a variety of biochemical and biophysical techniques including analytical gel filtration, activity assays, SPR, EM and FTIR. The characterization of E6 oligomers is facilitated by the fusion to the maltose binding protein (MBP), which slows down the formation of higher-order multimeric species. The proportion of each oligomeric form vary depending on the viral strain considered. Oligomers appear to consist of folded units, which, in the case of high-risk mucosal HPV E6, retain binding to the ubiquitin ligase E6AP and the capacity to degrade the pro-apoptotic protein p53. In addition to the small-size oligomers, E6 proteins spontaneously assemble into large organized multimeric structures, a process which is accompanied by a significant increase in the βsheet secondary structure content. Finally, co-localisation experiments using E6 equipped with different tags further demonstrate the occurrence of E6 self-association in eukaryotic cells. The ensemble of these data suggest that self-association is a general property of E6 proteins which occurs both in vitro and in vivo and might therefore be functionally relevant.

  • Membrane structure and interactions of human catestatin by multidimensional solution and solid‐state NMR spectroscopy

    Masae Sugawara, Jarbas M Resende, Cléria Mendonça Moraes, Arnaud Marquette, Jean-François Chich, Marie‐hélène Metz‐boutigue, Burkhard Bechinger
    FASEB Journal, 2010, 24 (6), pp.1737 - 1746. ⟨10.1096/fj.09-142554⟩ | Publiée le 26 janvier 2010
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    Catestatin is a natural peptide of higher organisms including humans, with a wide variety of biological functions involved in catecholamine inhibition, cardiovascular regulation, control of blood pressure, inflammation, and innate immunity. It is derived from the natural processing of chromogranin A, induced in the skin after injury, and produced by chromaffin cells and neutrophils. With neutrophils, the peptide enters the cell by crossing the plasma membrane where it interacts with internal targets to induce calcium influx. Therefore, we investigated the membrane interactions and structure of several catestatinderived peptides. Whereas fluorescence dye release experiments are indicative of membrane permeabilization, multidimensional solution NMR and circular dichroism spectroscopies show that catestatin adopts ␣-helical conformations between Ser-6 and Tyr-12 in the presence of dodecylphosphocholine micelles. Furthermore, proton-decoupled 15 N solid-state NMR spectroscopy of sequences labeled with 15 N and reconstituted into oriented lipid bilayers indicates that this domain is aligned in a strongly tilted to inplanar alignment. Proton-decoupled 31 P NMR spectra of the same samples are indicative of conformational and/or orientational heterogeneity at the level of the lipid bilayer head groups due to the presence of catestatin. The sequence and 3-dimensional structure of catestatin exhibit homologies with penetratin, which is suggestive that they both enter the cells by related mechanisms to target internal structures.

  • The Temperature‐Dependent Hydrogen‐Bonding Signature of Lipids Monitored in the Far‐Infrared Domain

    Ruth Hielscher, Petra Hellwig
    ChemPhysChem, 2010, 11 (2), pp.435-441. ⟨10.1002/cphc.200900430⟩ | Publiée le 26 janvier 2010
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    Abstract Phospholipids are studied by means of Fourier transform infrared (FTIR) spectroscopy in the mid‐ and far‐infrared spectral ranges, thereby establishing the hydrogen‐bonding continuum as a function of the temperature. The well‐known mid‐infrared spectrum of the phospholipid layer clearly shows a temperature‐dependent phase transition. In the far‐infrared region (from 300 to 50 cm −1 ), an alternation of the interaction between the phospholipids and water molecules is found. The hydrogen‐bonding network ensemble and bound water molecules can be monitored in this spectral region. The lipid structure is found to strongly influence the intermolecular hydrogen‐bonding interplay. Thus, studies in the far‐infrared region provide significant information—at the molecular level—about the intermolecular hydrogen‐bonding signature of self‐assembled phospholipids.

  • The "Phantom Effect" of the Rexinoid LG100754: structural and functional insights.

    Yoshiteru Sato, Nick Ramalanjaona, Tiphaine Huet, Noelle Potier, Judit Osz, Pierre Antony, Carole Peluso-Iltis, Pierre Poussin-Courmontagne, Eric Ennifar, Yves Mély, Annick Dejaegere, Dino Moras, Natacha Rochel
    PLoS ONE, 2010, 5 (11), pp.e15119. ⟨10.1371/journal.pone.0015119⟩ | Publiée le 1 janvier 2010
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    Retinoic acid receptors (RARs) and Retinoid X nuclear receptors (RXRs) are ligand-dependent transcriptional modulators that execute their biological action through the generation of functional heterodimers. RXR acts as an obligate dimer partner in many signalling pathways, gene regulation by rexinoids depending on the liganded state of the specific heterodimeric partner. To address the question of the effect of rexinoid antagonists on RAR/RXR function, we solved the crystal structure of the heterodimer formed by the ligand binding domain (LBD) of the RARα bound to its natural agonist ligand (all-trans retinoic acid, atRA) and RXRα bound to a rexinoid antagonist (LG100754). We observed that RARα exhibits the canonical agonist conformation and RXRα an antagonist one with the C-terminal H12 flipping out to the solvent. Examination of the protein-LG100754 interactions reveals that its propoxy group sterically prevents the H12 associating with the LBD, without affecting the dimerization or the active conformation of RAR. Although LG100754 has been reported to act as a 'phantom ligand' activating RAR in a cellular context, our structural data and biochemical assays demonstrate that LG100754 mediates its effect as a full RXR antagonist. Finally we show that the 'phantom ligand effect' of the LG100754 is due to a direct binding of the ligand to RAR that stabilizes coactivator interactions thus accounting for the observed transcriptional activation of RAR/RXR.

  • Non-Innocent behavior of a tridentate NHC chelating ligand coordinated onto a Zirconium(IV) center

    C. Romain, Karinne Miqueu, Jean-Marc Sotiropoulos, S. Bellemin-Laponnaz, S. Dagorne
    Angewandte Chemie International Edition, 2010, 49 (12), pp.2198-2201. ⟨10.1002/anie.200906702⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    Chemical Equation Presented" NHC me, now you don't: A tridentate bis(aryloxide)NHC-chelating ligand readily coordinates to ZrIV and undergoes an unprecedented THF-promoted benzyl migration from the zirconium metal center to the Ccarbene atom of the NHC. NHC=N-heterocyclic carbene. © 2010 Wiley-VCH Verlag GmbH &amp; Co. KGaA.

  • Crystal structure of bis[mu(2)-5,11-bis(diphenylphosphanyl)-25,26-dipropyloxy-27,28-bis(2-pro penyl)calix[4]arene-P:P ']disilver(I) bis(tetrafluoroborate) - dichloromethane (1:2), [Ag-2(C64H62O4P2)(2)][BF4](2)center dot 2CH(2)Cl(2)

    Mouhamad Awada, Catherine Jeunesse, Eric Brenner, Dominique Matt, Loic Toupet
    Zeitschrift für Kristallographie - New Crystal Structures, 2010, 225 (1), pp.176--178. ⟨10.1524/ncrs.2010.0076⟩ | Publiée le 1 janvier 2010
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    C65H64AgBCl2F4O4P2, monoclinic, P12(1)/n1 (no 14), a = 16 6993(8) angstrom, b = 23 1203(9) angstrom, c = 17 0133(7) angstrom, beta = 115 197(6)degrees, V = 5943 8 angstrom(3), Z = 4, R-gt(F) = 0.080, wR(ref)(F-2) = 0 215, T = 150 K

  • A simple way for the electropolymerization of porphyrins

    Alain Giraudeau, Delphine Schaming, Jian Hao, Rana Farha, Michel Goldmann, Laurent Ruhlmann
    Journal of Electroanalytical Chemistry, 2010, 638 (1), pp.70-75. ⟨10.1016/j.jelechem.2009.10.018⟩ | Publiée le 1 janvier 2010
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    A novel and simple method for the electropolymerization of porphyrins is developed. Polarization of a working electrode at the second ring-oxidation potential of octaethylporphyrins in the presence of appropriate bridging nucleophiles is sufficient to realize the coating of the electrode by a cationic polymeric film. Characterizations of the obtained films are presented.

  • The dehydrogenation of ammonia-borane catalysed by dicarbonylruthenacyclic(II) complexes.

    Cedric Boulho, Jean-Pierre Djukic
    Dalton Transactions, 2010, 39 (38), pp.8893-8905. ⟨10.1039/c0dt00241k⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    The reactivity of ruthenacyclic compds. towards ammonia-borane's dehydrogenation was investigated by considering both hydrolytic and anhyd. conditions. The study shows that the highly sol. μ-chlorido dicarbonylruthenium(ii) dimeric complex derived from 4-tert-butyl,2-(p-tolyl)pyridine promotes, with an activation energy Ea of 22.8 kcal mol-1, the complete hydrolytic dehydrogenation of NH3BH3 within minutes at ca. 40°. The release of 3 equiv. of H2 entails the formation of boric acid derivs. and the partly reversible protonolysis of the catalyst, which produces free 2-arylpyridine ligand and a series of isomers of "Ru(CO)2(H)(Cl)". Under anhyd. conditions, hydrogen gas release was slower and the dehydrogenation of NH3BH3 results in the formation of conventional amino-borane derivs. with concomitant protonolysis of the catalyst and release of isomers of "Ru(CO)2(H)(Cl)". The mechanism of the protonolysis of the ruthenacycle was investigated with state-of-the-art DFT-D methods. It was found to proceed by the concerted direct attack of the catalyst by NH3BH3 leading either to the formation of a coordinatively unsatd. "Ru(CO)2(H)(Cl)" species. The key role of "Ru(CO)2(H)(Cl)" species in the dehydrogenation of ammonia-borane was established by trapping and quenching expts. and inferred from a comparison of the catalytic activity of a series of dicarbonylruthenium(ii) complexes. [on SciFinder(R)]

  • Structural characterization of hemoglobins from Monilifera and Frenulata tubeworms (Siboglinids): First discovery of giant hexagonal-bilayer hemoglobin in the former "Pogonophora'' group

    Cédric Meunier, Ann C. Andersen, Matthieu Bruneaux, Dominique Le Guen, Peran Terrier, Emmanuelle Leize-Wagner, Franck Zal
    Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 2010, 155 (1), pp.41-48. ⟨10.1016/j.cbpa.2009.09.010⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    Siboglinids are symbiotic polychete annelids having hemoglobins as essential oxygen- and sulfide-carriers for their endosymbiotic bacteria. We analyzed the structure of the hemoglobins from two species of siboglinids: the monilifera Sclerolinum contortum and the frenulata Oligobrachia webbi (i.e. haakonmosbiensis) from Norwegian cold seeps. Measured by Multi-Angle Laser Light Scattering (MALLS), Sclerolinum shows a 3190+/-50 kDa hexagonal bilayer hemoglobin (HBL-Hb) and a 461+/-46 kDa ring-Hb, just as vestimentifera, whereas Oligobrachia has a 409+/-3.7 kDa ring-Hb only. Electrospray Ionization-Mass Spectrometry (ESI-MS) showed Sclerolinum HBL-Hb composed of seven monomeric globins (15-16 kDa), three disulfide-bonded globin heterodimers and three linkers. The heterodimers always contain globin-b (15814.4+/-1.5Da). Sclerolinum ring-Hb is composed of globins and dinners with identical masses as its HBL-Hb, but lacks linkers. Oligobrachia ring-Hb has three globin monomers (14-15 kDa) only, with no disulfide-bonded dimers. Comparison of Sclerolinum hemoglobins between Storegga and Haakon Mosby Mud Volcano, using the normalized height of deconvoluted ESI-MS peaks, shows differences in globin monomers abundances that could reflect genetic differences or differential gene expression between distinct seep populations. The discovery of HBL-Hb in Sclerolinum is a new element supporting the hypothesis of monilifera being phylogenetically more closely related to vestimentifera, than to frenulata.

  • Synthesis and Photophysical Properties of Copper(I) Complexes Obtained from 1,10-Phenanthroline Ligands with Increasingly Bulky 2,9-Substituents

    Gianluca Accorsi, Nicola Armaroli, Carine Guyard-Duhayon, Alix Sournia-Saquet, Béatrice Delavaux-Nicot, Richard Welter, Omar Moudam, Michel Holler, Jean-François Nierengarten
    European Journal of Inorganic Chemistry, 2010, 2010 (1), pp.164-173. ⟨10.1002/ejic.200900954⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    In this paper, we describe the synthesis and the electronic properties of a series of [Cu(NN)(2)](+) systems. The NN ligands investigated are 2,9-bis[(tert-butyldimethylsilyloxy)methyl]-1,10-phenanthroline (1), 2,9-bis[(triisopropylsilyloxy)methyl]-1,10-phenanthroline (2), 2,9-bis[(tert-butyldiphenylsilylmoxy) ethyl]-1, 10 -phenanthroline(3), 2,9-bis[2,6-bis(benzyloxy)phenethyl]-1,10-phenanthroline (4) and 2-(1,3-diphenylpropan-2-yl)-9-phenethyl-1,10-phenanthroline (5). The electrochemical properties and the ground state electronic.

  • A Discrete Five-Coordinated Cationic Aluminum Complex Supported by a Fluorinated Dialkoxy-Diimino Salen-like Ligand: Synthesis, Structure and Use in Polymerization Catalysis

    Samuel Dagorne, Miloud Bouyahyi, Jérôme Vergnaud, Jean-François Carpentier
    Organometallics, 2010, 29 (7), pp.1865-1868. ⟨10.1021/om1000937⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    Methyl abstraction from a neutral aluminum complex stabilized by a salen-like fluorinated dialkoxide-diimino ligand yields the corresponding cationic species, which exists as a five-coordinate Et2O adduct in the solid state and in solution. This complex promotes the cationic polymerization of propylene oxide and p-methylstyrene at low temperatures.

  • Origin and Evolution of the Unique Tetra-Domain Hemoglobin from the Hydrothermal Vent Scale Worm Branchipolynoe

    J. Projecto-Garcia, N. Zorn, Didier Jollivet, S. W. Schaeffer, François Lallier, Stépahne Hourdez
    Molecular Biology and Evolution, 2010, 27 (1), pp.143-152. ⟨10.1093/molbev/msp218⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    Hemoglobin is the most common respiratory pigment in annelids. It can be intra or extracellular, and this latter type can form large multimeric complexes. The hydrothermal vent scale worms Branchipolynoe symmytilida and Branchipolynoe seepensis express an extracellular tetra-domain hemoglobin (Hb) that is unique in annelids. We sequenced the gene for the single-domain and tetra-domain globins in these two species. The single-domain gene codes for a mature protein of 137 amino acids, and the tetra-domain gene codes for a mature protein of 552 amino acids. The single-domain gene has a typical three exon/two intron structure, with introns located at their typical positions (B12.2 and G7.0). This structure is repeated four times in the tetra-domain gene, with no bridge introns or linker sequences between domains. The phylogenetic position of Branchipolynoe globins among known annelid globins revealed that, although extracellular, they cluster within the annelid intracellular globins clade, suggesting that the extracellular state of these Hbs is the result of convergent evolution. The tetra-domain structure likely resulted from two tandem duplications, domain 1 giving rise to domain 2 and after this the two-domain gene duplicated to produce domains 3 and 4. The high O(2) affinity of Branchipolynoe extracellular globins may be explained by the two key residues (B10Y and E7Q) in the heme pocket in each of the domains of the single and tetra-domain globins, which have been shown to be essential in the oxygen-avid Hb from the nematode Ascaris suum. This peculiar globin evolutionary path seems to be very different from other annelid extracellular globins and is most likely the product of evolutionary tinkering associated with the strong selective pressure to adapt to chronic hypoxia that characterizes hydrothermal vents.

  • Synthesis, Caharacterization, and Electronic Properties of Metalloporphyrins Annulated to Exocyclic Imidazole and Imidazolium Rings

    Jean-François Lefebvre, Dominique Leclercq, Jean-Paul Gisselbrecht, Sébastien Richeter
    European Journal of Organic Chemistry, 2010, pp.1912-1920. ⟨10.1002/ejoc.200901310⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    meso-Tetraarylporphyrin complexes (M = Ni, Cu, Zn, H2) fused to an imidazole ring across two neighboring β-pyrrolic positions were synthesized through a cyclization reaction between β,β'-diaminoporphyrins and formic acid or trimethyl orthoformate under acidic conditions. Two synthetic procedures were used to obtain the corresponding porphyrin N,N'-dimethylimidazolium salts derivatives: alkylation of the imidazole nitrogen atoms with iodomethane and the cyclization reaction between the porphyrin bearing two neighboring β-N-methyl groups and trimethyl orthoformate in the presence of ammonium hexafluorophosphate. The electrochemical properties of these porphyrins annulated to an imidazole/imidazolium ring have been investigated by cyclic and rotating disk voltammetry.

  • The Crucial Role of Dispersion in the Cohesion of Nonbridged Binuclear Os → Cr and Os → W Adducts

    Stefan Grimme, Jean-Pierre Djukic
    Inorganic Chemistry, 2010, 49 (6), pp.2911-2919. ⟨10.1021/ic9024662⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    The concept of a dative metal-metal bond is generally used to designate the donor-acceptor (DA) interaction of an electron-satd. metal center with another electron-deficient - or unsatd. - metal center. This type of DA bonding extended to the field of coordination complexes constitutes a borderline case of weak metal-metal interaction, among which the so-called metallophilic interactions occurring with 4d, 5d, and other late-transition-metal complexes are the most documented and representative examples. From a general standpoint, the peculiar position of the so-called dative metal-metal bond in chem. bonding stems from its presumed covalent character, which contrasts with the situation encountered with metallophilic interactions, which are essentially supported by dispersion and electrostatic forces and somewhat sustained by relativistic effects. In this study, the nature of the metal-metal bond in nonbridged 5d-3d Os-Cr and 5d-5d Os-W adducts, i.e., (Me3P)(CO)4Os-M(CO)5 (M = Cr, W) and (CO)5Os-Cr(CO)5, was addressed by resorting to state-of-the-art quantum-chem. methods. Semilocal d. functional theory (DFT) approxns. like Becke-Perdew or TPSS, the double-hybrid B2PLYP functional, as well as the corresponding dispersion, including TPSS-D and B2PLYP-D functionals and the wave-function-based spin-component-scaled second-order perturbative MP2 theory (SCS-MP2), were used. Energy decompn. anal. combined with the anal. of pairwise interfragment correlation energies from Pipek-Mezey localized MOs in combination with SCS-MP2 led to a clear demonstration of the significant role of dispersion (London) forces in the stabilization of the title adducts, wherein the Os-metal DA bond bears a rather low covalent character. These results plead in favor of a systematic recourse to dispersion including DFT approxns. when addressing organometallic and coordination complexes. [on SciFinder(R)]

  • Aromatized C-2 oxygenated triterpenoids as indicators for a novel transformation pathway in the environment

    Claude Le Milbeau, Philippe Schaeffer, Jacques Connan, Pierre Albrecht, Pierre Adam
    Organic Letters, 2010, 12 (7), pp.1504-1507. ⟨10.1021/ol100144t⟩ | Publiée le 1 janvier 2010
    Article dans une revue

    Four oleanane-related triterpenoid ketones and phenols isolated from an archaeological piece of oak wood have been identified by NMR studies. Their structures give clue to the diagenetic transformation of 2,3-oxygenated higher plant triterpenoids in the environment

  • Theory of the electron and nuclear spin coherence times of shallow donor spin qubits in isotopically and chemically purified zinc oxide

    Jérôme Tribollet
    The European Physical Journal B: Condensed Matter and Complex Systems, 2009, 72 (4), pp.531-540. ⟨10.1140/epjb/e2009-00395-8⟩ | Publiée le 1 décembre 2009
    Article dans une revue

    In this article, I present a theoretical study of the electron and nuclear spin coherence times of shallow donor spin qubits in zinc oxide (ZnO) at low temperature. The influence of different spin-phonon processes as well as different spin-spin processes on the spin coherence time of shallow donors in ZnO is considered, both in the case of an electron spin qubit and in the case of a nuclear spin qubit encoded on a shallow donor. It is estimated that the electron spin coherence time of an isolated indium shallow donor in natural quasi-intrinsic ZnO is on the order of hundreds of microseconds, limited by the nuclear spectral diffusion process. The electron spin coherence time of an isolated indium shallow donor can be extended to few milliseconds in isotopically and chemically purified quasi-intrinsic ZnO. In this optimal case, the electron spin coherence time of an isolated indium shallow donor is only limited by a spin-lattice decoherence process. It is also estimated that the nuclear spin coherence time of an isolated indium shallow donor in natural quasi-intrinsic ZnO is on the order of hundreds of milliseconds, limited by the nuclear spectral diffusion process. The nuclear spin coherence time of an isolated indium shallow donor can be extended to few seconds in isotopically and chemically purified quasi-intrinsic ZnO. In this optimal case, the nuclear spin coherence time of an isolated indium shallow donor is only limited by the cross relaxation decoherence process. This study thus shows the great potential of electron and nuclear spin qubits encoded on shallow donors in isotopically and chemically purified quasi-intrinsic ZnO for the implementation of quantum processor and/or quantum memories.

  • Crystal growth of proteins, nucleic acids, and viruses in gels.

    Bernard Lorber, Claude Sauter, Anne Théobald-Dietrich, Abel Moreno, Pascale Schellenberger, Marie-Claire Robert, Bernard Capelle, Sarah Sanglier, Noëlle Potier, Richard Giegé
    Progress in Biophysics and Molecular Biology, 2009, 101 (1-3), pp.13-25. ⟨10.1016/j.pbiomolbio.2009.12.002⟩ | Publiée le 1 novembre 2009
    Article dans une revue

    Medium-sized single crystals with perfect habits and no defect producing intense and well-resolved diffraction patterns are the dream of every protein crystallographer. Crystals of biological macromolecules possessing these characteristics can be prepared within a medium in which mass transport is restricted to diffusion. Chemical gels (like polysiloxane) and physical gels (such as agarose) provide such an environment and are therefore suitable for the crystallisation of biological macromolecules. Instructions for the preparation of each type of gel are given to urge crystal growers to apply diffusive media for enhancing crystallographic quality of their crystals. Examples of quality enhancement achieved with silica and agarose gels are given. Results obtained with other substances forming gel-like media (such as lipidic phases and cellulose derivatives) are presented. Finally, the use of gels in combination with capillary tubes for counter-diffusion experiments is discussed. Methods and techniques implemented with proteins can also be applied to nucleic acids and nucleoprotein assemblies such as viruses.

  • The incorporation of indigo molecules in sepiolite tunnels

    Sonia Ovarlez, Francoise Giulieri, Anne-Marie Chaze, François Delamare, Jesus Raya, Jerôme Hirschinger
    Chemistry - A European Journal, 2009, 15 (42), pp.11326-11332. ⟨10.1002/chem.200901482⟩ | Publiée le 26 octobre 2009
    Article dans une revue

    Evidence for access of molecules the size of acetone or pyridine to the intracrystalline tunnels of nanofibre clay (sepiolite) has indicated formation of a new type of organic-inorganic nanocomposites. However, the introduction of larger molecules has been a recurring problem. It is now agreed that for indigo, the molecules are located on the external surface and at the ends of the fibres, thus blocking access to internal tunnels. We claim, however, that it is possible for indigo molecules to access the internal channels of sepiolite. FTIR and XRD analyses have provided evidence for folding of the sepiolite structure preheated at high temperature (above 350°C). By comparison, we have shown that for indigo/sepiolite mixtures treated in the same conditions, no change in the crystalline structure of the sepiolite is observed, and that blue samples, related to Maya blue, with indigo molecules incorporated deeply enough into sepiolite to prevent folding of the tunnels, can be obtained. NMR, FTIR and thermal analysis confirm the interaction of indigo with the water coordinated to magnesium(II) and located inside the internal and external channels of sepiolite. Two other hypotheses are excluded; we show both that zeolitic water is not blocked in the tunnels by indigo, and that if thermal decomposition products of indigo can be formed, they are in a minority.

  • Molecular and isotopic archaeology: Top grade tools to investigate organic archaeological materials

    Armelle Charrié-Duhaut, Pauline Burger, Joachim Maurer, Jacques Connan, Pierre Albrecht
    Comptes Rendus. Chimie, 2009, 12 (10-11), pp.1140-1153. ⟨10.1016/j.crci.2009.01.001⟩ | Publiée le 1 octobre 2009
    Article dans une revue

    Molecular and isotopic studies of archaeological organic remains, based on identification of biomarker, allow their characterisation. Using a rigorous fractionation scheme of organic extracts and mass spectrometric techniques (GC–MS, LC–MS, GC-C-IRMS), this is likely to provide information on the nature of substances, their production technique, their alteration state and, more generally, on their history. The results of the analysis from two series of samples are reported in this paper: dammar resins (Thailand, 4th B.C.–2nd B.C., pure materials) and an organic deposit on Osiris statuettes (Pharaonic Egypt, mixture of animal fat, bitumen, vegetal resin, beeswax).

  • Membrane structure and conformational changes of the antibiotic heterodimeric peptide distinctin by solid-state NMR spectroscopy

    Jarbas Resende, Cléria Mendonça Moraes, Victor Munhoz, Christopher Aisenbrey, Rodrigo Verly, Philippe Bertani, Amary Cesar, Dorila Piló-Veloso, Burkhard Bechinger
    Proceedings of the National Academy of Sciences of the United States of America, 2009, 106 (39), pp.16639-16644. ⟨10.1073/pnas.0905069106⟩ | Publiée le 29 septembre 2009
    Article dans une revue

    The heterodimeric antimicrobial peptide distinctin is composed of 2 linear peptide chains of 22- and 25-aa residues that are connected by a single intermolecular S-S bond. This heterodimer has been considered to be a unique example of a previously unrecorded class of bioactive peptides. Here the 2 distinctin chains were prepared by chemical peptide synthesis in quantitative amounts and labeled with 15 N, as well as 15 N and 2 H, at selected residues, respectively, and the heterodimer was formed by oxidation. CD spectroscopy indicates a high content of helical secondary structures when associated with POPC/POPG 3:1 vesicles or in membrane-mimetic environments. The propensity for helix formation follows the order heterodimer &gt;chain 2 &gt;chain 1, suggesting that peptide-peptide and peptide-lipid interactions both help in stabilizing this secondary structure. In a subsequent step the peptides were reconstituted into oriented phospholipid bilayers and investigated by 2 H and proton-decoupled 15 N solid-state NMR spectroscopy. Whereas chain 2 stably inserts into the membrane at orientations close to perfectly parallel to the membrane surface in the presence or absence of chain 1, the latter adopts a more tilted alignment, which further increases in the heterodimer. The data suggest that membrane interactions result in considerable conformational rearrangements of the heterodimer. Therefore, chain 2 stably anchors the heterodimer in the membrane, whereas chain 1 interacts more loosely with the bilayer. These structural observations are consistent with the antimicrobial activities when the individual chains are compared to the dimer.

  • Synthesis and characterization of nucleobase-carbon nanotube hybrids.

    Prabhpreet Singh, Jitendra Kumar, Francesca Maria Toma, Jesus Raya, Maurizio Prato, Bruno Fabre, Sandeep Verma, Alberto Bianco
    Journal of the American Chemical Society, 2009, 131 (37), pp.13555-62. ⟨10.1021/ja905041b⟩ | Publiée le 23 septembre 2009
    Article dans une revue

    We report the synthesis and characterization of adenine-single-walled carbon nanotube (SWCNT) hybrid materials, where for the first time nucleobases are covalently attached to the exosurface of SWCNTs. The structural properties of all hybrids have been characterized using usual spectroscopic and microscopic techniques. The degree of functional groups for functionalized SWCNTs (f-SWCNTs) 2a and 2b is one adenine group for each 26 and 37 carbon atoms, respectively. Solid-state magic angle spinning (13)C NMR spectroscopy (MAS NMR) and electrochemistry have been also applied for the characterization of these f-SWCNTs. AFM images of f-SWCNT 2b showed an interesting feature of horizontally aligned nanotubes along the surface when deposited on highly oriented pyrolytic graphite surface. Furthermore, we evaluated the coordinating ability of these hybrid materials toward silver ions, and interestingly, we found a pattern of silver nanoparticles localized over the surface of the carbon nanotube network. The presence of aligned and randomly oriented CNTs and their ability to coordinate with metal ions make this class of materials very interesting for applications in the development of novel electronic devices and as new supports for different catalytic transformations.

  • Power and limitations of electrophoretic separations in proteomics strategies.

    Thierry Rabilloud, Ali R Vaezzadeh, Noelle Potier, Cécile Lelong, Emmanuelle Leize-Wagner, Mireille Chevallet
    Mass Spectrometry Reviews, 2009, 28 (5), pp.816-43. ⟨10.1002/mas.20204⟩ | Publiée le 1 septembre 2009
    Article dans une revue

    Proteomics can be defined as the large-scale analysis of proteins. Due to the complexity of biological systems, it is required to concatenate various separation techniques prior to mass spectrometry. These techniques, dealing with proteins or peptides, can rely on chromatography or electrophoresis. In this review, the electrophoretic techniques are under scrutiny. Their principles are recalled, and their applications for peptide and protein separations are presented and critically discussed. In addition, the features that are specific to gel electrophoresis and that interplay with mass spectrometry (i.e., protein detection after electrophoresis, and the process leading from a gel piece to a solution of peptides) are also discussed.

  • Spontaneous Reduction of High‐Spin Fe III Complexes Supported by Benzoic Hydrazide Derivative Ligands

    Nouri Bouslimani, Nicolas Clement, Clément Toussaint, Sophie Hameury, Philippe Turek, Sylvie Choua, Samuel Dagorne, David Martel, Richard Welter
    European Journal of Inorganic Chemistry, 2009, 2009 (25), pp.3734-3741. ⟨10.1002/ejic.200900382⟩ | Publiée le 19 août 2009
    Article dans une revue

    We report herein experimental evidence for the spontaneous reduction of new high‐spin iron(III) Fe III (L ( n ) ) 2 Cl, L complexes to new high‐spin iron(II) Fe II (HL ( n ) ) 2 Cl 2 mononuclear complexes. These processes were checked by EPR, cyclovoltammetric, and pseudo‐steady voltammetric studies. Crystal structures of three new complexes (one Fe III and two Fe II ) were obtained from RX single‐crystal diffraction.(© Wiley‐VCH Verlag GmbH &amp; Co. KGaA, 69451 Weinheim, Germany, 2009)

  • Archaeological resinous samples from Asian wrecks: Taxonomic characterization by GC–MS

    Pauline Burger, Armelle Charrié-Duhaut, Jacques Connan, Michael Flecker, Pierre Albrecht
    Analytica Chimica Acta, 2009, 648 (1), pp.85-97. ⟨10.1016/j.aca.2009.06.022⟩ | Publiée le 1 août 2009
    Article dans une revue

    Plant resins, and particularly dammars from the Dipterocarpaceae family, were widely used in the past, notably as part of caulking material. The organic composition of resins, already complicated, is not always preserved over time and can be considerably affected by ageing. Hence, their occurrence in archaeological items leads to the necessity to identify them taxonomically with precision. Resinous organic materials collected near and/or on wrecks discovered in South China Sea, supposed to contain dammar resins because of their geographical excavation context, were investigated by gas chromatography-mass spectrometry (GC-MS), together with freshly collected dammars, to establish taxonomic and alteration parameters allowing to identify dammar even in very altered samples or in mixtures together with other organic materials. This study specially focuses on three samples collected within or close to the M1J wreck, a Portuguese wreck lost in the Straight of Malacca during the 16th century. Our analyses establish that all three are made of dammar, two of them in association with pitch and bitumen. In addition, biodegradation biomarkers were detected in all these three samples, indicating that they were submitted to microbial degradation processes during their ageing.

  • A Ruthenium-Containing Organometallic Compound Reduces Tumor Growth through Induction of the Endoplasmic Reticulum Stress Gene CHOP

    Xiangjun Meng, Mili Leyva, Marjorie Jenny, Isabelle Gross, Samir Benosman, Bastien Fricker, Sebastien Harlepp, Pascal Hebraud, Anne Boos, Pauline Wlosik, Pierre Bischoff, Claude Sirlin, Michel Pfeffer, Jean-Philippe Loeffler, Christian Gaiddon
    Cancer Research, 2009, 69 (13), pp.5458-5466. ⟨10.1158/0008-5472.CAN-08-4408⟩ | Publiée le 1 juillet 2009
    Article dans une revue

    Cisplatin-derived anticancer therapy has been used for three decades despite its side effects. Other types of organometallic complexes, namely, some ruthenium-derived compounds (RDC), which would display cytotoxicity through different modes of action, might represent alternative therapeutic agents. We have studied both in vitro and in vivo the biological properties of RDC11, one of the most active compounds of a new class of RDCs that contain a covalent bond between the ruthenium atom and a carbon. We showed that RDC11 inhibited the growth of various tumors implanted in mice more efficiently than cisplatin. Importantly, in striking contrast with cisplatin, RDC11 did not cause severe side effects on the liver, kidneys, or the neuronal sensory system. We analyzed the mode of action of RDC11 and showed that RDC11 interacted poorly with DNA and induced only limited DNA damages compared with cisplatin, suggesting alternative transduction pathways. Indeed, we found that target genes of the endoplasmic reticulum stress pathway, such as Bip, XBP1, PDI, and CHOP, were activated in RDC11-treated cells. Induction of the transcription factor CHOP, a crucial mediator of endoplasmic reticulum stress apoptosis, was also confirmed in tumors treated with RDC11. Activation of CHOP led to the expression of several of its target genes, including proapoptotic genes. In addition, the silencing of CHOP by RNA interference significantly reduced the cytotoxicity of RDC11. Altogether, our results led us to conclude that RDC11 acts by an atypical pathway involving CHOP and endoplasmic reticulum stress, and thus might provide an interesting alternative for anticancer therapy.

  • Molecular basis for Bcl-2 homology 3 domain recognition in the Bcl-2 protein family: identification of conserved hot spot interactions.

    Gautier Moroy, Elyette Martin, Annick Dejaegere, Roland H. Stote
    Journal of Biological Chemistry, 2009, 284 (26), pp.17499-511. ⟨10.1074/jbc.M805542200⟩ | Publiée le 26 juin 2009
    Article dans une revue

    The proteins of the Bcl-2 family are important regulators of apoptosis, or programmed cell death. These proteins regulate this fundamental biological process via the formation of heterodimers involving both pro- and anti-apoptotic family members. Disruption of the balance between anti- and pro-apoptotic Bcl-2 proteins is the cause of numerous pathologies. Bcl-xl, an anti-apoptotic protein of this family, is known to form heterodimers with multiple pro-apoptotic proteins, such as Bad, Bim, Bak, and Bid. To elucidate the molecular basis of this recognition process, we used molecular dynamics simulations coupled with the Molecular Mechanics/Poisson-Boltzmann Surface Area approach to identify the amino acids that make significant energetic contributions to the binding free energy of four complexes formed between Bcl-xl and pro-apoptotic Bcl-2 homology 3 peptides. A fifth protein-peptide complex composed of another anti-apoptotic protein, Bcl-w, in complex with the peptide from Bim was also studied. The results identified amino acids of both the anti-apoptotic proteins as well as the Bcl-2 homology 3 (BH3) domains of the pro-apoptotic proteins that make strong, recurrent interactions in the protein complexes. The calculations show that the two anti-apoptotic proteins, Bcl-xl and Bcl-w, share a similar recognition mechanism. Our results provide insight into the molecular basis for the promiscuous nature of this molecular recognition process by members of the Bcl-2 protein family. These amino acids could be targeted in the design of new mimetics that serve as scaffolds for new antitumoral molecules.

  • Toward Generic Models of Hemoproteins

    Mamadou Lo, Dinesh Mahajan, Jennifer A. Wytko, Corinne Boudon, Jean Weiss
    Organic Letters, 2009, 11 (12), pp.2487-2490. ⟨10.1021/ol900774d⟩ | Publiée le 18 juin 2009
    Article dans une revue

    The versatility of a resorcinol-substituted phenanthroline-strapped porphyrin was enhanced by appending allyl chains via a double Claisen rearrangement. Two pyridine arms were then appended to the resorcinol oxygens. This multifunctional porphyrin is a suitable generic building block for the preparation of liposoluble heme protein models. X-ray characterization of the pentacoordinated zinc complex and the binding of a sixth imidazole ligand to the ferric complex both suggest a facilitated access to an empty distal site.

  • Side chain resonances in static oriented proton-decoupled 15N solid-state NMR spectra of membrane proteins.

    Christopher Aisenbrey, Lydia Prongidi-Fix, Alexandre Chenal, Daniel Gillet, Burkhard Bechinger
    Journal of the American Chemical Society, 2009, 131 (18), pp.6340-1. ⟨10.1021/ja900677b⟩ | Publiée le 13 mai 2009
    Article dans une revue

    Proton-decoupled (15)N solid-state NMR spectra are used to analyze the structure, dynamics, and membrane topology of proteins uniformly labeled with (15)N. Preparation of the proteins by bacterial overexpression results in the labeling not only of the backbone amides but also of nitrogens localized within the side chains of arginine, glutamine, tryptophan, asparagines, lysines, and histidines. Most of these side chain resonances appear in the spectral region of the anisotropic backbone amides, and residual intensities have been observed also in cross-polarization spectra. In the past this issue has received little attention although it can cause ambiguities during assignment. Here we show that by combining cross-polarization and Hahn echo solid-state NMR experiments, it is possible to differentiate between side chain and backbone resonances. This is demonstrated using experimental and simulated (15)N spectra of oriented purple membranes, diphtheria toxin T domain and Bcl-x(L).

  • Structural study of Carcinus maenas hemocyanin by native ESI-MS: Interaction with L-lactate and divalent cations

    Matthieu Bruneaux, Peran Terrier, Emmanuelle Leize, Jean Mary, François Lallier, Franck Zal
    Proteins - Structure, Function and Bioinformatics, 2009, 77 (3), pp.589-601. ⟨10.1002/prot.22471⟩ | Publiée le 11 mai 2009
    Article dans une revue

    The interaction of L-lactate and divalent cations with Carcinus maenas hemocyanin has been probed by electrospray ionization mass spectrometry under conditions preserving noncovalent interactions (native ESI-MS). C. maenas native hemocyanin in the hemolymph occurs mainly as dodecamers and to a lesser extent as hexamers. A progressive acidification with formic acid after alkaline dissociation resulted in the preferential recruitment of the two lightest subunits into light dodecamers, a molecular complex absent from native hemolymph, in addition to regular dodecamers and hexamers. Addition of L-lactic acid also induced the recruitment of these subunits, even at alkaline pH. A dodecamer-specific subunit is needed to enable aggregation over the hexameric state. Experiments with EDTA suggested the existence of different binding sites and association constants for divalent cations within hexameric structures and at the interface between two hexamerS. L-lactic acid specific interaction with the lightest subunits was not inhibited by removal of the divalent cations.

  • Production and isotope labeling of antimicrobial peptides in Escherichia coli by means of a novel fusion partner that enables high‐yield insoluble expression and fast purification

    Verica Vidovic, Lydia Prongidi-Fix, Burkhard Bechinger, Sebastiaan Werten
    Journal of Peptide Science, 2009, 15 (4), pp.278-284. ⟨10.1002/psc.1112⟩ | Publiée le 1 avril 2009
    Article dans une revue

    Abstract A method is presented that allows efficient production of antimicrobial peptides in bacteria by means of fusion to the histone fold domain of the human transcription factor TAF12. This small fusion partner drives high‐level expression of peptides and leads to their accumulation in an entirely insoluble form, thereby eliminating toxicity to the host. Using the antimicrobial peptide LAH4 as an example, we demonstrate that neither affinity purification of the TAF12 fusion protein nor initial solubilization of inclusion bodies in denaturing buffers is required. Instead, crude insoluble material from bacteria is directly dissolved in formic acid for immediate release of the peptide through chemical cleavage at a unique Asp‐Pro site. This is followed by purification to homogeneity in a single chromatographic step. Because of the elevated expression levels of the histone fold domain and its small size (8 kDa), this straightforward purification scheme produces yields in excess of 10 mg active peptide per liter of culture. We demonstrate that TAF12 fusion allows expression of a wide range of antimicrobial peptides as well as efficient isotope labeling for NMR studies. Copyright © 2009 European Peptide Society and John Wiley &amp; Sons, Ltd.

  • Alamethicin Topology in Phospholipid Membranes by Oriented Solid-state NMR and EPR Spectroscopies: a Comparison

    Evgeniy S Salnikov, Marta De Zotti, Fernando Formaggio, Xing Li, Claudio Toniolo, Joe D J Oʼneil, Jan Raap, Sergei A Dzuba, Burkhard Bechinger
    Journal of Physical Chemistry B, 2009, 113 (10), pp.3034 - 3042. ⟨10.1021/jp8101805⟩ | Publiée le 12 février 2009
    Article dans une revue

    <div><p>Alamethicin, a hydrophobic peptide that is considered a paradigm for membrane channel formation, was uniformly labeled with 15 N, reconstituted into oriented phosphatidylcholine bilayers at concentrations of 1 or 5 mol %, and investigated by solid-state NMR spectroscopy as a function of temperature. Whereas the peptide adopts a transmembrane alignment in POPC bilayers at all temperatures investigated, it switches from a transmembrane to an in-plane orientation in DPPC membranes when passing the phase transition temperature. This behavior can be explained by an increase in membrane hydrophobic thickness and the resulting hydrophobic mismatch condition. Having established the membrane topology of alamethicin at temperatures above and below the phase transition, ESEEM EPR was used to investigate the water accessibility of alamethicin synthetic analogues carrying the electron spin label TOAC residue at one of positions 1, 8, or 16. Whereas in the transmembrane alignment the labels at positions 8 and 16 are screened from the water phase, this is only the case for the latter position when adopting an orientation parallel to the surface. By comparing the EPR and solid-state NMR data of membrane-associated alamethicin it becomes obvious that the TOAC spin labels and the cryo-temperatures required for EPR spectroscopy have less of an effect on the alamethicin-POPC interactions when compared to DPPC. Finally, at P/L ratios of 1/100, spectral line broadening due to spin-spin interactions and thereby peptide oligomerization within the membrane were detected for transmembrane alamethicin.</p></div>

  • Dynamic Combinatorial Evolution within Self-Replicating Supramolecular Assemblies

    Rémi Nguyen, Lionel Allouche, Eric Buhler, Nicolas Giuseppone
    Angewandte Chemie International Edition, 2009, 48 (6), pp.1093-1096. ⟨10.1002/anie.200804602⟩ | Publiée le 26 janvier 2009
    Article dans une revue

    Survival of the fittest: Self-assemblies made of dynamic block copolymers (dynablocks) can self-replicate by catalyzing the formation of their own building blocks. Moreover, in competition experiments, the differential thermodynamic stabilities and autocatalytic efficiencies of these self-assemblies lead to sigmoid growth of the most efficient self-replicator and to depletion of its competitors.

  • Deciphering Membrane Insertion of the Diphtheria Toxin T Domain by Specular Neutron Reflectometry and Solid-State NMR Spectroscopy

    Alexandre Chenal, Lydia Prongidi-Fix, Aurélie Perier, Christopher Aisenbrey, Grégory Vernier, Stéphane Lambotte, Giovanna Fragneto, Burkhard Bechinger, Daniel Gillet, Vincent Forge, Michel Ferrand
    Journal of Molecular Biology, 2009, 391 (5), pp.872-883. ⟨10.1016/j.jmb.2009.06.061⟩ | Publiée le 1 janvier 2009
    Article dans une revue

    Insertion and translocation of soluble proteins into and across biological membranes are involved in many physiological and pathological processes, but remain poorly understood. Here, we describe the pH-dependent membrane insertion of the diphtheria toxin T domain in lipid bilayers by specular neutron reflectometry and solid-state NMR spectroscopy. We gained unprecedented structural resolution using contrast-variation techniques that allow us to propose a sequential model of the membrane-insertion process at angstrom resolution along the perpendicular axis of the membrane. At pH 6, the native tertiary structure of the T domain unfolds, allowing its binding to the membrane. The membrane-bound state is characterized by a localization of the C-terminal hydrophobic helices within the outer third of the cis fatty acyl-chain region, and these helices are oriented predominantly parallel to the plane of the membrane. In contrast, the amphiphilic N-terminal helices remain in the buffer, above the polar headgroups due to repulsive electrostatic interactions. At pH 4, repulsive interactions vanish; the N-terminal helices penetrate the headgroup region and are oriented parallel to the plane of the membrane. The C-terminal helices penetrate deeper into the bilayer and occupy about two thirds of the acyl-chain region. These helices do not adopt a transmembrane orientation. Interestingly, the T domain induces disorder in the surrounding phospholipids and creates a continuum of water molecules spanning the membrane. We propose that this local destabilization permeabilizes the lipid bilayer and facilitates the translocation of the catalytic domain across the membrane.

  • Accumulation of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate in illuminated plant leaves at supraoptimal temperatures reveals a bottleneck of the prokaryotic methylerythritol 4-phosphate pathway of isoprenoid biosynthesis.

    Corinne Rivasseau, Myriam Seemann, Anne-Marie Boisson, Peter Streb, Elisabeth Gout, Roland Douce, Michel Rohmer, Richard Bligny
    Plant, Cell and Environment, 2009, 32 (1), pp.82-92. ⟨10.1111/j.1365-3040.2008.01903.x⟩ | Publiée le 1 janvier 2009
    Article dans une revue

    Metabolic profiling using phosphorus nuclear magnetic resonance ((31)P-NMR) revealed that the leaves of different herbs and trees accumulate 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MEcDP), an intermediate of the methylerythritol 4-phosphate (MEP) pathway, during bright and hot days. In spinach (Spinacia oleracea L.) leaves, its accumulation closely depended on irradiance and temperature. MEcDP was the only (31)P-NMR-detected MEP pathway intermediate. It remained in chloroplasts and was a sink for phosphate. The accumulation of MEcDP suggested that its conversion rate into 4-hydroxy-3-methylbut-2-enyl diphosphate, catalysed by (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase (GcpE), was limiting under oxidative stress. Indeed, O(2) and ROS produced by photosynthesis damage this O(2)-hypersensitive [4Fe-4S]-protein. Nevertheless, as isoprenoid synthesis was not inhibited, damages were supposed to be continuously repaired. On the contrary, in the presence of cadmium that reinforced MEcDP accumulation, the MEP pathway was blocked. In vitro studies showed that Cd(2+) does not react directly with fully assembled GcpE, but interferes with its reconstitution from recombinant GcpE apoprotein and prosthetic group. Our results suggest that MEcDP accumulation in leaves may originate from both GcpE sensitivity to oxidative environment and limitations of its repair. We propose a model wherein GcpE turnover represents a bottleneck of the MEP pathway in plant leaves simultaneously exposed to high irradiance and hot temperature.

  • Les bateaux du pont romain de Chalon-sur-Saône (Saône-et-Loire) : des témoins de l’évolution des techniques de construction navale au Ier s. apr. J.-C.

    Catherine Lonchambon, Louis Bonnamour, Jacques Connan, Philippe Thômé, Catherine Michel
    Gallia - Archéologie de la France antique, 2009, 66 (2), pp.59-112. ⟨10.3406/galia.2009.3367⟩ | Publiée le 1 janvier 2009
    Article dans une revue

    L’étude archéologique du pont romain de Chalon-sur-Saône a donné lieu, en 1996, à la découverte de deux embarcations ayant coulé, au milieu du I<sup>er</sup> s. apr. J.-C., contre la pile centrale du premier pont. La mieux conservée correspond à une pirogue d’une taille exceptionnelle : 15,50 m de longueur pour 1,62 m de largeur. L’autre, de type chaland, qui devait mesurer 14 m à 18 m de longueur pour 2,30 m de largeur à l’origine, n’est conservée qu’au niveau de la partie médiane du fond, mais les comparaisons effectuées avec d’autres chalands de même type récemment découverts dans la Saône et le Rhône permettent d’en restituer les caractéristiques principales. La présence conjointe d’une pirogue, qui relève d’une tradition de construction navale ancienne, et d’un chaland, plus novateur, confère au site un intérêt particulier et unique à ce jour, eu égard aux autres découvertes françaises. La place de ce chaland dans l’ensemble plus large des embarcations « gallo-romaines », et en particulier dans le sous-groupe « Rhône-Saône » défini par Éric Rieth, est envisagée. Le système architectural dont il relève, <i>a priori</i> monoxyle-assemblé, et son origine sont discutés. Des propositions sont formulées quant aux concepts élaborés pour définir ces deux types d’embarcations.

  • Effect of the supporting electrolyte anion on the thickness of PSS/PAH multilayer films and on their permeability to an electroactive probe.

    Alae E El Haitami, David Martel, Vincent Ball, Hoan Cong Nguyen, Eric Gonthier, Pierre Labbé, Jean-Claude Voegel, Pierre Schaaf, Bernard Senger, Fouzia Boulmedais
    Langmuir, 2009, 25 (4), pp.2282-2289. ⟨10.1021/la803534y⟩ | Publiée le 1 janvier 2009
    Article dans une revue

    Quartz crystal microbalance and cyclic voltammetry are used to investigate the influence of the supporting salt of polyelectrolyte solutions on the buildup and the structure of PSS/PAH polyelectrolyte multilayers (PSS: poly(4-styrene sulfonate); PAH: poly(allylamine hydrochloride)). This film constitutes a model polyelectrolyte multilayer system. The supporting electrolytes were sodium salts where the nature of the anion was changed by following the Hofmeister series from cosmotropic to chaotropic anions (F-, Cl-, NO3-, ClO4-). For all the investigated anions, the film thickness increases linearly with the number of deposition steps.Wefind that chaotropic anions lead to larger thickness increments per bilayer during the film buildup than cosmotropic ones, confirming results found on PSS/PDADMA multilayers (PDADMA:poly(diallyldimethylammonium)). Films constituted by more than nine PSS/PAH bilayers are still permeable to hexacyanoferrate(II) ions, Fe(CN)(6)4-, whatever the nature of the supporting salt anion. On the other hand, these films are impermeable to ruthenium(II) hexamine ions, Ru(NH3)(6)2+, after the third PAH layer in the presence of NaF, NaCl, or NaNO3. These results are explained by the presence of an excess of positive charges in the film, which leads to a positive Donnan potential. We find that this potential is more positive when more chaotropic anions are used during the film buildup. We also find that a film constructed in the presence of chaotropic anions swells and becomes more permeable to Fe(CN)(6)4- ions when the film is brought into contact with a solution containing more cosmotropic anions. All our experimental findings can be explained by a strong interaction between chaotropic anions with the NH3+groups of PAH that is equivalent, as far as the multilayer buildup and electrochemical response is concerned, to a deprotonation of PAH as it is observed when the film is constructed at a higher pH. We thus arrive to a coherent explanation of the effect of the nature of the anions of the supporting electrolyte on the polyelectrolyte multilayer. We also find that great care must be taken when investigating polyelectrolyte multilayer films by electrochemical probing because electrochemical reactions involving the probes can appreciably modify the multilayer structure.

  • Cycloruthenated Compounds, Synthesis and Applications

    Jean‐pierre Djukic, Jean‐baptiste Sortais, Laurent Barloy, Michel Pfeffer
    European Journal of Inorganic Chemistry, 2009, 2009 (7), pp.817-853. ⟨10.1002/ejic.200801016⟩ | Publiée le 1 janvier 2009
    Article dans une revue

    Abstract The syntheses of cycloruthenated compounds by several methods, and especially by the C–H activation pathway, have been reviewed. Many ruthenium‐containing starting materials lead to these interesting organometallic compounds, which have found various applications in different fields of chemistry. Their reactivity highlights both thevariety of reactions that were found to occur at the Ru–C bonds as well as the inertness of the organometallic moiety when these species are exposed to strongly oxidizing molecules or to reactive halogenation reagents. Their use as catalyst precursors showed them to be particularly efficient for hydrogenation reactions, either by H 2 or by hydride transfer. Physicochemical characteristics of cycloruthenated complexes include: (i) a cathodic shift of the electrochemical potentials corresponding to various redox couples, (ii) a bathochromic shift of UV/Vis absorption bands, (iii) valuable luminescence properties. Dinuclear cycloruthenated complexes display specific properties connected to interactions between the metals, such as strong electronic coupling, evidenced by intervalence bands of mixed‐valence species, or efficient energy transfer.(© Wiley‐VCH Verlag GmbH &amp; Co. KGaA, 69451 Weinheim, Germany, 2009)

  • Experimental and Computational Study of the Framework Fluxionality of Organometallic Derivatives of Polyoxometalates: Analysis of the Effect of the Metal and of the Solvent

    Danielle Laurencin, René Thouvenot, Kamal Boubekeur, Françoise Villain, Richard Villanneau, Marie Madeleine Rohmer, Marc Bénard, Anna Proust
    Organometallics, 2009, 28, pp.3140-3151. ⟨10.1021/om8011568⟩ | Publiée le 1 janvier 2009
    Article dans une revue

    Organometallic oxides of general formula [Mo4O16{Ru(arene)}4] display two isomeric forms, referred to as the "triple cubane" and "windmill" structures. In a previous study (Laurencin et al. Chem. Eur. J. 2004, 10, 208), we had shown that the arene ligand plays an important role on the relative stability of the two isomers. In this work, new experiments and DFT calculations have been carried out in order to try to rationalize and further control the isomerization process in solution. The synthesis and spectroscopic study of [Mo4O16{Os(p-cymene)}4] shows that when ruthenium is replaced by osmium, the equilibria in CHCl3 and CH2Cl2 can be altered. In the case of [Mo4O16{Ru(p-cymene)}4], 1H NMR experiments carried out on CD2Cl2/CD3OD solutions reveal that the solvent, through its polarity and molecular form, has a strong impact on the isomerization. DFT calculations were performed on [Mo4O16{M(arene)}4] (M = Ru, Os ; arene = benzene, toluene, mesitylene, p-cymene, hexamethylbenzene). The change in relative energy of the computed structures by switching from ruthenium to osmium is found to be in line with the experimental observations. Calculations also show that the dielectric properties of the solvent, as well as the facility with which it can access the oxometallic core, directly influence the relative stability of both isomers. This work should thus open the way to further studies of organometallic oxides, by allowing their rational preparation and a better understanding of their properties, thanks to a precise analysis of their interaction with the solvation environment.

  • Dipole allowed transitions in GdF: A four-component relativistic general open-shell configuration interaction study.

    Shigeyoshi Yamamoto, Hiroshi Tatewaki, Trond Saue
    The Journal of Chemical Physics, 2008, 129 (24), pp.244505. ⟨10.1063/1.3039794⟩ | Publiée le 28 décembre 2008
    Article dans une revue

    A four-component relativistic study of electronic transitions in the gadolinium monofluoride molecule (GdF) is presented. The electronic spectra of GdF have been investigated with a general open-shell configuration interaction method, where active electrons are distributed among molecular spinors mainly consisting of the Gd 4f, 5d, and 6s atomic spinors. The near-degeneracy effects of these spinors on the molecular electronic structure are considered by the valence full-CI-like approach. By the magnitudes of calculated transition dipole moments, the candidates for the observable transitions were selected. The present result is complementary to our previous study based on multireference configuration interaction singles and doubles calculations, which identified the electronic excited states of GdF by comparing the calculated excitation energies and angular momenta with those given by the laser spectroscopy. The spectra of the excited states less than 3.0 eV have been refined with the help of the calculated transition probabilities. The transitions between the excited states are newly analyzed and a rearrangement is proposed.

  • Structural Determinants of Antimicrobial and Antiplasmodial Activity and Selectivity in Histidine-rich Amphipathic Cationic Peptides

    A. James Mason, Wardi Moussaoui, Tamer Abdelrahman, Alyae Boukhari, Philippe Bertani, Arnaud Marquette, Peiman Shooshtarizaheh, Gilles Moulay, Nelly Boehm, Bernard Guerold, Ruairidh Sawers, Antoine Kichler, Marie-Hélène Metz-Boutigue, Ermanno Candolfi, Gilles Prévost, Burkhard Bechinger
    Journal of Biological Chemistry, 2008, 284 (1), pp.119-133. ⟨10.1074/jbc.M806201200⟩ | Publiée le 26 décembre 2008
    Article dans une revue

  • Potential Proton‐Release Channels in Bacteriorhodopsin

    Alain Chaumont, Marcel Baer, Gerald Mathias, Dominik Marx
    ChemPhysChem, 2008, 9 (18), pp.2751-2758. ⟨10.1002/cphc.200800471⟩ | Publiée le 15 décembre 2008
    Article dans une revue

    Abstract The protein bacteriorhodopsin pumps protons across a bacterial membrane; its pumping cycle is triggered by the photoisomerization of a retinal cofactor and involves multiple proton‐transfer reactions between intermittent protonation sites. These transfers are either direct or mediated by hydrogen‐bonded networks, which may include internal water molecules. The terminal step of the proton‐transfer sequence is the proton release from a pocket near Glu194 and Glu204 to the extracellular bulk during the transition from the L to the M photointermediate states. The polar and charged side chains connecting these two regions in the crystal structures show no structural changes between the initial bR state and the L/M states, and no intermittent protonation changes have been detected so far in this region. Based on biomolecular simulations, we propose two potential proton‐release channels, which connect the release pocket to the extracellular medium. In simulations of the L photointermediate we observe bulk water entering these channels and forming transient hydrogen‐bonded networks, which could serve as fast deprotonation pathways from the release pocket to the bulk via a Grotthuss mechanism. For the first channel, we find that the triple Arg7, Glu9, and Tyr79 acts as a valve, thereby gating water uptake and release. The second channel has two release paths, which split at the position Asn76/Pro77 underneath the release group. Here, water molecules either exchange directly with the bulk or diffuse within the protein towards Arg 134/Lys129, where the exchange with the bulk occurs.

  • Middle Palaeolithic bitumen use at Umm el Tlel around 70 000 BP

    Eric Boëda, Stéphanie Bonilauri, Jacques Connan, Dan Jarvie, Norbert Mercier, Mark Tobey, Hélène Valladas, Heba al Sakhel, Sultan Muhesen
    Antiquity, 2008, 82 (318), pp.853-861. ⟨10.1017/S0003598X00097623⟩ | Publiée le 1 décembre 2008
    Article dans une revue

    The authors identify natural bitumen on stone implements dating to 70 000 BP. It is proposed that this represents residue from hafting, taking the practice back a further 30 000 years from the date previously noted and published in Nature. The bitumen was tracked to a source 40km away, using gas chromatography-mass spectrometry and carbon isotopes

  • Kinetics and Mechanism of Ruthenacycle-Catalyzed Asymmetric Hydrogen Transfer

    Nicolas Pannetier, Jean-Baptiste Sortais, Pape Sylla Dieng, Laurent Barloy, Claude Sirlin, Michel Pfeffer
    Organometallics, 2008, 27 (22), pp.5852-5859. ⟨10.1021/om800420r⟩ | Publiée le 24 novembre 2008
    Article dans une revue

    The mechanism of asymmetric hydrogen transfer catalyzed by a ruthenacycle has been studied. Ruthenium-hydride intermediates have been characterized by 1H NMR and IR. These hydride complexes appeared as a diastereomeric mixture (de = 64%) responsible for the enantiomeric excess of the hydrogen transfer reaction (ee = 60%). Kinetic measurements have been performed as a function of substrate concentration and temperature. Michaelis−Menten kinetics were observed indicating substrate−catalyst complex formation (thermodynamic data for the complexation reaction: ΔG0 = −13 kJ mol−1 at 273 K, ΔH0 = −58 kJ mol−1, ΔS0 = −170 J K−1 mol−1). The complexation process is accomplished prior to an intracomplex chemical reaction. As the substrate is still bound to the catalyst, pericyclic hydrogen transfer is deduced with an activation energy Ea = 83 kJ mol−1. On the basis of these data, a mechanism is proposed for the overall hydrogen transfer reaction.

  • Ultra long spin coherence time for Fe 3+ in ZnO: A new spin qubit

    Jérôme Tribollet, J. Behrends, K. Lips
    EPL - Europhysics Letters, 2008, 84 (2), pp.20009. ⟨10.1209/0295/0295-5075/84/20009⟩ | Publiée le 14 octobre 2008
    Article dans une revue

    We show by means of two pulse electron spin echo experiments on Fe3+ transition metal ions in natural ZnO that their spins S = \frac{5}{2} have a spin coherence time limited at T = 6 K first by instantaneous diffusion (≈ 150 μs), then by nuclear spectral diffusion (≈ 450 μs) and ultimately by spin-lattice processes (≈ 1.4 ms). We predict a spin coherence time in the millisecond range for such a spin qubit in isotopically and chemically purified ZnO. The spin state of a single Fe3+ spin qubit could be readout by optical methods and it could be coherently manipulated using pulsed electron spin resonance (ESR) methods. A free carrier electrically gated between two nearby Fe3+ ions could efficiently couple two Fe3+ spin qubits. All those elements suggest the high potential of the Fe3+ spin qubits in ZnO for the implementation of a scalable ESR quantum computer.

  • Solution NMR structures of the antimicrobial peptides phylloseptin-1, -2, and -3 and biological activity: The role of charges and hydrogen bonding interactions in stabilizing helix conformations

    Jarbas Resende, Cléria Mendonça Moraes, Maura Prates, Amary Cesar, Fabio C.L. Almeida, Nathália C.C.R. Mundim, Ana Paula Valente, Marcelo Bemquerer, Dorila Piló-Veloso, Burkhard Bechinger
    Peptides, 2008, 29 (10), pp.1633-1644. ⟨10.1016/j.peptides.2008.06.022⟩ | Publiée le 1 octobre 2008
    Article dans une revue

  • Nucleotide-induced conformational changes in the Escherichia coli NADH:ubiquinone oxidoreductase (complex I)

    Thomas Pohl, Daniel Schneider, Ruth Hielscher, Stefan Stolpe, Katerina Dörner, Markus Kohlstädt, Bettina Böttcher, Petra Hellwig, Thorsten Friedrich
    Biochemical Society Transactions, 2008, 36 (5), pp.971-975. ⟨10.1042/BST0360971⟩ | Publiée le 19 septembre 2008
    Article dans une revue

    The energy-converting NADH:ubiquinone oxidoreductase, also known as respiratory complex I, couples the transfer of electrons from NADH to ubiquinone with the translocation of protons across the membrane. Electron microscopy revealed the two-part structure of the complex consisting of a peripheral and a membrane arm. The peripheral arm contains all known cofactors and the NADH-binding site, whereas the membrane arm has to be involved in proton translocation. Owing to this, a conformation-linked mechanism for redox-driven proton translocation is discussed. By means of electron microscopy, we show that both arms of the Escherichia coli complex I are widened after the addition of NADH but not of NADPH. NADH-induced conformational changes were also detected in solution: ATR-FTIR (attenuated total reflection Fourier-transform infrared) of the soluble NADH dehydrogenase fragment of the complex indicates protein re-arrangements induced by the addition of NADH. EPR spectroscopy of surface mutants of the complex containing a covalently bound spin label at distinct positions demonstrates NADH-dependent conformational changes in both arms of the complex.

  • Characterization of mutations in crucial residues around the Q o binding site of the cytochrome bc 1 complex from Paracoccus denitrificans

    Thomas Kleinschroth, Oliver Anderka, Michaela Ritter, Andreas Stocker, Thomas Link, Bernd Ludwig, Petra Hellwig
    FEBS Journal, 2008, 275 (19), pp.4773-4785. ⟨10.1111/j.1742-4658.2008.06611.x⟩ | Publiée le 11 septembre 2008
    Article dans une revue

    The protonation state of residues around the Q o binding site of the cytochrome bc 1 complex from Paracoccus denitrificans and their interaction with bound quinone(s) was studied by a combined electrochemical and FTIR difference spectroscopic approach. Site‐directed mutations of two groups of conserved residues were investigated: (a) acidic side chains located close to the surface and thought to participate in a water chain leading up to the heme b L edge, and (b) residues located in the vicinity of this site. Interestingly, most of the mutants retain a high degree of catalytic activity. E295Q, E81Q and Y297F showed reduced stigmatellin affinity. On the basis of electrochemically induced FTIR difference spectra, we suggest that E295 and D278 are protonated in the oxidized form or that their mutation perturbs protonated residues. Mutations Y302, Y297, E81 and E295, directly perturb signals from the oxidized quinone and of the protein backbone. By monitoring the interaction with the inhibitor stigmatellin for the wild‐type enzyme at various redox states, interactions of the bound stigmatellin with amino acid side chains such as protonated acidic residues and the backbone were observed, as well as difference signals arising from the redox active inhibitor itself and the replaced quinone. The infrared difference spectra of the above Q o site mutations in the presence of stigmatellin confirm the previously established role of E295 as a direct interaction partner in the enzyme from P. denitrificans as well. The protonated residue E295 is proposed to change the hydrogen‐bonding environment upon stigmatellin binding in the oxidized form, and is deprotonated in the reduced form. Of the residues located close to the surface, D278 remains protonated and unperturbed in the oxidized form but its frequency shifts in the reduced form. The mechanistic implications of our observations are discussed, together with previous inhibitor binding data, and referred to the published X‐ray structures.

  • ISIDA - Platform for Virtual Screening Based on Fragment and Pharmacophoric Descriptors

    Alexandre Varnek, Denis Fourches, Dragos Horvath, Olga Klimchuk, Cedric Gaudin, Philippe Vayer, Vitaly Solovyev, Frank Hoonakker, Igor Tetko, Gilles Marcou
    Current Computer Aided-Drug Design, 2008, 4 (3), pp.191-198. ⟨10.2174/157340908785747465⟩ | Publiée le 1 septembre 2008
    Article dans une revue

    In this paper we illustrate the application of the ISIDA (In SIlico design and Data Analysis) software to perform virtual screening of large databases of compounds and reactions and to assess some ADME/Tox properties. ISIDA represents an ensemble of tools allowing users to store, search and analyze the data, to perform similarity searches in large databases of molecules and reactions, to build and validate QSAR models, and to generate and screen virtual combinatorial libraries. It uses its own descriptors (substructural molecular fragments and fuzzy pharmacophore triplets). Workflow can be easily organized by combining different ISIDA modules. Several examples of ISIDA applications (similarity search of potent benzodiazepine ligands with FPT, QSAR modeling of aqueous solubility, aquatic toxicity, tissue-air partition coefficients, anti-HIV activity, and screening of the “Chimiotheque Nationale” Database), are discussed. Particular attention is paid to mining reaction databases using Condensed Reaction Graphs approach.

  • Exploring Helical Folding of Oligoureas During Chain Elongation by High-Resolution Magic-Angle-Spinning (HRMAS) NMR Spectroscopy.

    Aude Violette, Nathalie Lancelot, Alexander Poschalko, Martial Piotto, Jean-Paul Briand, Jesus Raya, Karim Elbayed, Alberto Bianco, Gilles Guichard
    Chemistry - A European Journal, 2008, 14 (13), pp.3874-3882. ⟨10.1002/chem.200701923⟩ | Publiée le 28 avril 2008
    Article dans une revue

    The development of novel folding oligomers (foldamers) for biological and biomedical applications requires both precise structural information and appropriate methods to detect folding propensity. However, the synthesis and the systematic conformational investigation of large arrays of oligomers to determine the influence of factors, such as chain length, side chains, and surrounding environment, on secondary structure can be quite tedious. Herein, we show for 2.5-helical N,N'-linked oligoureas (gamma-peptide lineage) that the whole process of foldamer characterization can be accelerated by using high-resolution magic-angle-spinning (HRMAS) NMR spectroscopy. This was achieved by monitoring a simple descriptor of conformational homogeneity (e.g., chemical shift difference between diastereotopic main chain CH(2) protons) at different stages of oligourea chain growth on a solid support. HRMAS NMR experiments were conducted on two sets of oligoureas, ranging from dimer to hexamer, immobilized on DEUSS, a perdeuterated poly(oxyethylene)-based solid support swollen in solvents of low to high polarity. One evident advantage of the method is that only minute amount of material is required. In addition, the resonance of the deuterated resin is almost negligeable. On-bead NOESY spectra of high quality and with resolution comparable to that of liquid samples were obtained for longer oligomers, thus allowing detailed structural characterization.

  • Specific Isotope Labeling of Colicin E1 and B Channel Domains For Membrane Topological Analysis by Oriented Solid‐State NMR Spectroscopy

    Christopher Aisenbrey, Monica Cusan, Stephan Lambotte, Pieter Jasperse, Julia Georgescu, Ulrike Harzer, Burkhard Bechinger
    ChemBioChem, 2008, 9 (6), pp.944-951. ⟨10.1002/cbic.200700507⟩ | Publiée le 3 avril 2008
    Article dans une revue

    Abstract An approach is presented to selectively label the methionines of the colicin E1 and B channel domains, each about 200 residues in size, and use them for oriented solid‐state NMR investigations. By combining site‐directed mutagenesis, bacterial overexpression in a methionine auxotroph E. coli strain and biochemical purification, quantitative amounts of the proteins for NMR structural investigations were obtained. The proteins were selectively labeled with 15 N at only one, or at a few, selected sites. Multidimensional heteronuclear correlation high‐resolution NMR spectroscopy and mass spectrometry were used to monitor the quality of isotopic labeling. Thereafter the proteins were reconstituted into oriented phospholipid bilayers and investigated by proton‐decoupled 15 N solid‐state NMR spectroscopy. The colicin E1 thermolytic fragment that carries a single 15 N methionine within its hydrophobic helix 9 region exhibited 15 N resonances that are characteristic of helices that are oriented predominantly parallel to the membrane surface at low temperature, and a variety of alignments and conformations at room temperature. This suggests that the protein can adopt both umbrella and pen‐knife conformations.

  • Aggregation and membrane permeabilizing properties of designed histidine‐containing cationic linear peptide antibiotics

    Arnaud Marquette, A. James Mason, Burkhard Bechinger
    Journal of Peptide Science, 2008, 14 (4), pp.488-495. ⟨10.1002/psc.966⟩ | Publiée le 1 avril 2008
    Article dans une revue

    Abstract Members of the LAH4 family of cationic linear peptide antibiotics have been designed to form amphipathic helical structures in membrane environments and switch from alignments parallel to the bilayer surface to transmembrane orientations in a pH‐dependent manner. Here the aggregation in aqueous buffer of two members of the family has been investigated by DLS. The peptides form monomers or small oligomers at pH = 5 but associate into nano‐sized aggregates at physiological pH. The diameter of these latter complexes can be considerably reduced by sonication. Furthermore, the membrane interactions of the various supramolecular aggregates with POPC or mixed POPC/POPS vesicles have been investigated in calcein‐release assays. In all the cases tested, the large preformed oligomeric peptide aggregates of 20–40 nm in size were more active than the structures with the smallest hydrodynamic radii in releasing the fluorescent dye from LUV. In contrast, the relative activity after sonication depends on the specific environment tested. The data suggest that these amphiphiles form micellar structures and support the notion that they can act in a manner comparable to detergents. Copyright © 2007 European Peptide Society and John Wiley &amp; Sons, Ltd.

  • Autre publication scientifique
  • Brevet
  • Chapitre d'ouvrage
  • Carbenes and Nitrenes

    Emmanuel Gras, Stefan Chassaing
    Mark G. Moloney. Organic Reaction Mechanisms 2019: An annual survey covering the literature dated January to December 2019, Wiley, pp.141-177, 2023, Organic Reaction Mechanisms Series, 9781119608271. ⟨10.1002/9781119608288.ch4⟩ | Publiée le 20 janvier 2023
    Chapitre d'ouvrage

    A general review has appeared on catalyst design assisted by computations featuring some examples of carbenes acting either as organocatalysts or in situ generated reagents in metal-catalysed reactions. The decomposition of propylamine and propylammonium in the gas phase has been investigated by density functional theory and composite quantum chemistry methods. The formation of carbene–borane complexes has found numerous applications in recent years and allowed the identification of unprecedented reaction mechanisms. Computational studies have been conducted on the reaction mechanism of lithium and magnesium carbenoid cyclopropanations. The reactivity of photogenerated diphenylcarbene has been found to be controlled by the presence of additional protic molecules. Under metal-free conditions, nitrene-transfer reactions to olefins are still challenging. The development and optimization of aziridination reactions under transition metal catalysis are still attracting much attention.

  • Visible Repairs and Invisible Behaviour

    Pauline Debels, Kewin Pêche-Quilichini, Julien Perthuison, Pierre Adam, Philippe Schaeffer, Maxime Rageot, Arnaud Mazuy, Martine Regert
    Hiatus, lacunes et absences : identifier et interpréter les vides archéologiques, Actes du 29e Congrès préhistorique de France, 31 mai-4 juin 2021, Toulouse, Société préhistorique française, pp.146-156, 2023 | Publiée le 1 janvier 2023
    Chapitre d'ouvrage

    Ceramic vessels offer unparalleled performance characteristics that explains their success from the Neolithic forth: ability to hold liquids and sustain heat and shocks to a certain amount. They can also be made in a variety of convenient shapes and sizes. Because they are solicited in different aspects of daily life, they are also regularly broken. In this paper, we have considered pottery repairs from a functional standpoint and have attempted to repositioned them in the society that consumed them. Ceramic assemblages from two different chronocultural contexts were investigated: The Late Neolithic of the South of France (3600 BCE to 2000 BCE; MNI = 1,015) and the Protohistory of Corsica (1850-100 BCE; MNI = 10,115). Respectively, 39 and 126 pots have exhibited traces of repair, and using a variety of techniques. Organic residues associated with a repair operation have been identified on 63 pots and 25 of those residues underwent a chemical investigation bringing information on the use of repair adhesives in both contexts. Analysis of the acquired data has brough insights on invisible behaviour and has brought answers to fundamental questions: Which pots were chosen to be repaired and for what reason were the others discarded? What do the repair technics tell us about past function and value?Comparison between two different archaeological contexts from the western Mediterranean has allowed recurrences to be identified, possibly due to the physical attributes of pots but also dissimilarities, possibly linked to cultural traditions.

  • N-Heterocyclic Carbene Complexes of Cobalt

    Thomas Simler, Andreas Danopoulos, Pierre Braunstein
    Comprehensive Organometallic Chemistry IV, vol. 7, Elsevier, pp.632-758, 2022, ⟨10.1016/B978-0-12-820206-7.00109-8⟩ | Publiée le 1 janvier 2022
    Chapitre d'ouvrage

    N-heterocyclic carbenes (NHCs) have become ubiquitous ligands across the Periodic Table and enjoy a growing impact on various aspects of the coordination, organometallic and catalytic chemistry of the 3d metals in particular, both from the fundamental viewpoint but also in applications, including catalysis, photophysics, bioorganometallic chemistry, materials etc. More specifically, this Chapter aims at a comprehensive coverage of the development and state of the art of cobalt NHC complexes. It is based on a recently published review on this topic (in Chem. Rev. 2019, 119, 3730 − 3961) and provides an update covering the literature until the end of 2020.

  • N-Heterocyclic Carbene Complexes of Nickel

    Irene Ligielli, Andreas Danopoulos, Pierre Braunstein, Thomas Simler
    Comprehensive Organometallic Chemistry IV, vol. 8, Elsevier, pp.427-574, 2022, ⟨10.1016/B978-0-12-820206-7.00118-9⟩ | Publiée le 1 janvier 2022
    Chapitre d'ouvrage

    The impact of N-heterocyclic carbene (NHC) ligands across the Periodic Table in the last twenty years can be compared to that of classical donor ligands (in particular with P-donors) since the sixties. Nickel has established itself as one of the most popular metals for the application of the NHC ligand paradigm. The interest and topicality of the Ni–NHC organometallic chemistry have been amplified by the current renaissance of the chemistry of 3d metals in catalysis, stemming from its sustainability potential. These trends have been going along with better understanding and advancements of fundamental nature, for example in the areas of ligand design, metal–ligand bonding and metal coordination geometries, fundamental reactivity, electrochemical and magnetic properties, and catalyst development. This chapter will give a comprehensive account of the nickel NHC organometallic chemistry with emphasis on milestones and recent developments. It is constructed on the framework of a recently published comprehensive review by the same authors (Chem. Rev. 2019, 119, 3730 − 3961) and provides a more detailed and up-to-date coverage of the literature (until the end of 2020).

  • Metal Complexes as Catalysts/Moderators for Polymerization Reactions

    Christophe Fliedel, Samuel Dagorne, Erwan Le Roux
    Comprehensive Coordination Chemistry (Third Edition), 9 (Part 19. Applications in Catalysis - Ch. 9.14), Elsevier, pp.410-464, 2021, 978-0-12-409547-2 | Publiée le 20 juillet 2021
    Chapitre d'ouvrage

    This article highlights the most representative results on the use of coordination compounds in polymerization reactions, since the version of the Comprehensive Coordination Chemistry II by Gibson and Marshall (2003). Noteworthy developments of more efficient catalysts and related significant advancements in coordination polymerization of olefins, radical polymerization, lactide and related cyclic esters polymerization and CO2/epoxides polymerization are discussed therein

  • Density Functional Theories and Coordination Chemistry

    Chantal Daniel
    Edwin C. Constable; Gerard Parkin; Lawrence Que Jr. Comprehensive Coordination Chemistry III : Volume 2 - Fundamentals: Characterization Methods, Theoretical Analysis, and Case Studies, 2, Elsevier, pp.256-275, 2021, 978-0-08-102689-2. ⟨10.1016/B978-0-12-409547-2.14828-0⟩ | Publiée le 1 janvier 2021
    Chapitre d'ouvrage

    The aim of this review dedicated to molecular coordination chemistry and DFT-based methods are to describe succinctly DFT, TD-DFT and linear-response theories and to discuss the approximate exchange–correlation functionals currently used in coordination chemistry in the first part of the section dedicated to methodologies. The second part of this section is devoted to methods in developments with potential for solving important issues in coordination chemistry, both for electronic ground and excited states properties. This section is completed by a concise review of the analysis tools developed within the context of DFT-based methods. The last section concludes this survey by describing up-to-date inspiring applications related to electronic ground state and electronic excited state properties, respectively.

  • Molecular light switch effect in Ru(II) complexes intercalated in DNA: a theoretical study

    Theodore Simos, Theodore Simos, George Maroulis, Michiko Atsumi, Leticia González, Chantal Daniel
    Recent Progress in Computational Sciences and Engineering, 1, CRC Press, 2019, 9780429070655. ⟨10.1201/9780429070655⟩ | Publiée le 7 mai 2019
    Chapitre d'ouvrage

    Time-dependent DFT calculations are used to explain the opposed “light switch” photophysical behavior of [Ru(phen)2dppz]2+ and [Ru(tap)2(dppz)]2+, which is based on a very different character of the low-lying electronically excited states.

  • Identification of Allergens in Complex Mixtures and Products

    Elena Gimenez-Arnau
    Jeanne Duus Johansen; Vera Mahler; Jean-Pierre Lepoittevin; Peter J. Frosch. Contact Dermatitis, Springer, pp.1-14, 2019, 978-3-319-72451-5. ⟨10.1007/978-3-319-72451-5_5-1⟩ | Publiée le 1 janvier 2019
    Chapitre d'ouvrage

    Identifying contact allergens among the myriad of chemicals used in commercial products is an extremely arduous task. This is even more difficult in the case of components of complex mixtures such as natural extracts and essential oils. Today, non-animal alternative methods validated to assess the sensitizing potential of chemicals are, overall, unable to completely predict the skin sensitization potential of these complex mixtures of chemicals. Moreover, toxicological profiles are very difficult to extrapolate from the mere sum of the profiles of the individual constituents as required today. In this context, hazard identification remains still one of the best solutions for risk assessment. This chapter presents a brief overview of methods allowing the identification of allergens in complicated chemical mixtures, going from bioassay-guided fractionation and combination with structure-activity relationships studies to more recent new techniques developed to trap and identify reactive intermediates in natural extracts during air oxidation. Practical applications are exposed such as the case of oak moss AU2 absolute. Also, the assessment of the sensitization potential of tea tree oil is a typical example of the challenges that toxicologists encounter in the safety evaluation of essential oils. Methods based on chemical reactivity and fluorescence trapping, basically studying the oil after aging and air oxidation, are discussed. Hence, a great deal of progress has been accomplished during the last years for the identification of chemicals culprit of the sensitizing potential of very complex chemical mixtures. That being said, the identification of allergens in complex mixtures and products is still a challenging puzzle.

  • La química y los alérgenos más comunes

    Elena Giménez-Arnau
    Consejos para el manejo de los pacientes alérgicos a los componentes de la batería estándar del GEIDAC, 2018 | Publiée le 1 janvier 2018
    Chapitre d'ouvrage

  • DNP Solid-State NMR of Biological Membranes

    Burkhard Bechinger
    eMagRes, American Cancer Society, pp.25-34, 2018, 978-0-470-03459-0. ⟨10.1002/9780470034590.emrstm1558⟩ | Publiée le 1 janvier 2018
    Chapitre d'ouvrage

    While solid-state NMR/DNP has become a well-established technique to significantly increase the signals of molecules embedded in homogeneous glassy matrices, the enhancement factors observed in heterogeneous and/or matrix-free samples lag somewhat behind. The possible reasons for such differences, present limitations, and future prospects of solid-state NMR/DNP are discussed in the context of membrane protein investigations. Membrane polypeptides and lipids are studied by MAS as well as oriented sample solid-state NMR approaches. Notably, even the more modest DNP signal enhancements obtained in such samples augment the signal intensities by 1–2 orders of magnitude, thus opening up new territory in structural biology by allowing the detection of new conformers, so far invisible intermediate states, or the acquisition of smaller quantities of membrane-associated polypeptides in much less time. New sample preparation protocols, dedicated instrumental hardware, and specifically designed biradicals have much improved the application of DNP to membranes using MAS and/or oriented solid-state NMR technologies.

  • Functional Studies on Membrane Proteins by Means of H/D Exchange in Infrared: Structural Changes in Na(+) NQR from V. cholerae in the Presence of Lipids

    Yashvin Neehaul, Sébastien Kriegel, Blanca Barquera, Petra Hellwig
    Membrane Protein Structure and Function Characterization. Methods in Molecular Biology, 1635, Humana Press, 2017, 978-1-4939-7151-0. ⟨10.1007/978-1-4939-7151-0_13⟩ | Publiée le 1 janvier 2017
    Chapitre d'ouvrage

    H/D exchange kinetics at the level of the amide proton in the mid infrared (1700-1500 cm(-1)) make it possible to study the conformational flexibility of membrane proteins, independent of size or the presence of detergent or lipids. Slow, medium, and fast exchanging domains are distinguished, which reveal a different accessibility to the solvent. Whereas amide hydrogens undergo rapid exchange with solvent in an open structure, hydrogens experience much slower exchange when involved in H-bonded structures or when sterically inaccessible to the solvent. Here, we describe the protocol that was used to study the effect of phospholipids on the overall structure of the Na(+) NQR from V. cholerae, a sodium pumping membrane protein.

  • Metal-binding to Amyloid-β Peptide: Coordination, Aggregation and Reactive Oxygen Species Production

    Melisa del Barrio, Valentina Borghesani, Christelle Hureau, Peter Faller
    Anthony White; Michael Aschner; Lucio Costa; Ashley Bush. Biometals in Neurodegenerative Diseases 1st Edition - Mechanisms and Therapeutics, Elsevier, 2017, 9780128045626 | Publiée le 1 janvier 2017
    Chapitre d'ouvrage

    Amyloid-plaques are a hallmark of Alzheimer’s disease. They consist mainly of an aggregated peptide called amyloid-β. These plaques also accumulate high concentrations of metal ions, mainly Cu, Zn and Fe. Cu and Zn directly bind to amyloid-β in vivo. This triggered a strong research activity in order to understand the biology and chemistry of the interaction between metal ions and amyloid-β. This includes also the chemical and biophysical aspects of the metal-amyloid-β complexes. The present article describes the coordination chemistry of the Cu(II), Cu(I), Zn(II) and Fe(II) complexes in terms of ligand spheres and affinities. Moreover, metal ions modulate the selfassembly of amyloid-β into amyloids, a central event in Alzheimer’s disease. Attention was paid on the catalytic role of Cu-bound to amyloid-β, in particular in terms of the production of reactive oxygen species, which have been proposed to be involved in the disease progression. Recent mechanistic insights are described.

  • Polymerization Catalysis by Metal Phenolates

    Samuel Dagorne, Charles Romain
    Patai's Chemistry of Functional Groups, 2016, 978-1-119-08328-3 | Publiée le 19 septembre 2016
    Chapitre d'ouvrage

    The present contribution provides a broad overview on the latest significant developments on metal phenolate complexes for use in polymerization catalysis of olefins, cyclic esters, and cyclic carbonates. Systems mediating the CO2/epoxide polymerization are also especially emphasized.

  • Gallium and Indium Compounds in Homogeneous Catalysis

    Samuel Dagorne, Christophe Fliedel, Pierre de Fremont
    Encyclopedia of Inorganic and Bioinorganic Chemistry (Wiley), 2016 | Publiée le 15 juin 2016
    Chapitre d'ouvrage

    The present contribution highlights the most recent and representative developments on the use of Ga and In species in homogeneous catalysis. Recent studies of various ligand-supported Ga(III) and In(III) compounds in cyclic esters polymerization catalysis for the production of biodegradable polyester materials are also included. Various organic transformations may now be catalyzed using Ga(III) and In(III) Lewis acids allowing access to a wide range of valuable organic molecules through diverse reaction sequences. The recent use of stable and robust N-heterocyclic carbene Ga(III) and In(III) compounds as strong π-Lewis acid catalysts for various organic reactions is also discussed: such species are certainly promising for the future developments of Ga(III)- and In(III)-mediated reactions. Although Lewis acid-assisted reactions certainly dominate the field in Ga(III) and In(III) chemistry, discrete low-valent In(I) species, presently emerging in catalysis, clearly display a distinct reactivity allowing their exploitation both as soft Lewis acids and alkyl-/allyl-/arylating agents.

  • Absorption Spectroscopy, Emissive Properties and Ultrafast Intersystem Crossing Processes in Transition metal Complexes : TD-DFT and Spin-Orbit Coupling

    Chantal Daniel
    Nicolas Ferré, Michael Filatov, Miquel Huix-Rotllant. Density Functional Methods for Excited States, 368, Springer International; Topics in Current Chemistry, pp.377-414, 2015, 978-3-319-22080-2. ⟨10.1007/978-3-319-22081-9⟩ | Publiée le 1 janvier 2015
    Chapitre d'ouvrage

    Absorption spectroscopy, emissive properties, and ultrafast intersystem crossing processes in transition metal complexes are discussed in the light of recent developments in time-dependent density functional theory (TD-DFT), spin-orbit coupling (SOC) effects, and non-adiabatic excited states dynamics. Methodological highlights focus on spin-orbit and vibronic couplings and on the recent strategies available for simulating ultra-fast intersystem crossings (ISC). The role of SOC in the absorption spectroscopy of third-row transition metal complexes is illustrated by two cases studies, namely Ir (III) phenyl pyridine and Re (I) carbonyl bipyridine complexes.

  • Coordination Chemistry of Oxazoline/Thiazoline-Based P,N Ligands

    Shuanming Zhang, Roberto Pattacini, Pierre Braunstein
    Armando J. L. Pombeiro. Advances in Organometallic Chemistry and Catalysis, Wiley, 2013, 9781118742952. ⟨10.1002/9781118742952.ch14⟩ | Publiée le 15 novembre 2013
    Chapitre d'ouvrage

    Among the fast growing family of functional phosphine ligands, those containing a nitrogen donor function have attracted considerable interest over the past few years. In this short review, we will consider P,N chelating ligands in which the nitrogen donor belongs to an oxazoline or a thiazoline moiety, examine selected examples of their transition metal complexes according to the size of the chelating rings, and mention applications of some of these metal complexes as pre-catalysts for different transformations. The coordination behaviour of functional dppm ligands which have been C-substituted by an oxazoline heterocycle will also be discussed.

  • Histidine-Rich Cationic Amphipathic Peptides for Plasmid DNA and siRNA Delivery

    Antoine Kichler, A. James Mason, Arnaud Marquette, Burkhard Bechinger
    Nanotechnology for Nucleic Acid Delivery, 948, Humana Press, pp.85-103, 2013, Methods in Molecular Biology, ⟨10.1007/978-1-62703-140-0_7⟩ | Publiée le 14 septembre 2013
    Chapitre d'ouvrage

    Amphipathic, pH-responsive, membrane-active peptides such as LAH4 and derivatives thereof have the ability to effectively deliver genes and small interfering RNA (siRNA) into mammalian cells. Their ability to bind and protect nucleic acids and then disrupt membranes when activated at low pH enables them to harness the endocytic machinery to deliver cargo efficiently and with low associated toxicity. This chapter describes protocols for the chemical synthesis of transfection peptides of the LAH4 family, complex formation with nucleic acids, and their use for the in vitro delivery of either plasmid DNA or siRNA into mammalian cell lines.

  • L’analyse du bitume des éléments de faucilles en silex d’Ougarit (Bâtiment B du chantier “Grand-rue”)

    Pierre Adam, Philippe Schaeffer, Jacques Connan, Eric Coqueugniot, Valérie Matoïan, Francesca Onnis
    Matoïan, Valérie; Al Maqdissi, Michel. Études ougaritiques III, XXI, Éd. Peeters, pp.293-308, 2013, Ras Shamra - Ougarit, 978-90-429-3017-9 | Publiée le 1 janvier 2013
    Chapitre d'ouvrage

    Un ensemble exceptionnel d’outils provenant d’un atelier de travail du silex a été découvert sur le site de Ras Shamra (Syrie). Les silex mis à jour ont été plus particulièrement utilisés pour la fabrication ou la réparation de faucilles. Une étude a été réalisée afin de déterminer la nature et l’origine du matériau organique retrouvé à la surface de certains silex et vraisemblablement employé comme adhésif pour fixer les silex sur des manches de faucilles. L’analyse par chromatographie en phase gazeuse couplée à la spectrométrie de masse des hydrocarbures saturés de ces échantillons montre qu’ils sont principalement constitués de bitume sévèrement altéré. L’analogie de la composition isotopique du carbone ainsi que des profils moléculaires de ces bitumes avec ceux d’asphaltes naturels provenant du gisement de Kfarié, situé à proximité du site de Ras Shamra, a permis d’établir que ce gisement était à l’origine des échantillons de bitumes étudiés. Ces profils moléculaires sont caractérisés, notamment, par une contribution significative d’hydrocarbures hopaniques particuliers, comprenant les 28-norhopanes ainsi que les 2- et 3-méthylhopanes, qui ont permis de distinguer les échantillons analysés d’autres asphaltes naturels en usage au Moyen-Orient.

  • Oxidation of Porphyrins in the Presence of Nucleophiles: From the Synthesis of Multisubstituted Porphyrins to the Electropolymerization of the Macrocycles

    Delphine Schaming, Alain Giraudeau, Laurent Ruhlmann, Clémence Allain, Jian Hao, Yun Xia, Rana Farha, Michel Goldmann, Yann Leroux, Philippe Hapiot
    Ewa Schab-Balcerzak. Electropolymerization, InTech, pp.53-77, 2011, 978-953-307-693-5. ⟨10.5772/29086⟩ | Publiée le 1 janvier 2011
    Chapitre d'ouvrage

    Electropolymerization of porphyrins has been initially developed by Macor and Spiro, who have polymerized vinyl-substituted porphyrins, the coupling occurring after the formation of vinyl radicals by electrooxidation (Macor & Spiro, 1983). Afterwards, other methods of electropolymerization have been published, for example from hydroxy-, amino-, pyrrole- or thiophene-substituted porphyrins (Bedioui et al., 1995; Bettelheim et al., 1987; Li et al., 2005).In this context, we have developed an original methodology for the electropolymerization of porphyrins, based on nucleophilic attacks of di-pyridyl compounds directly onto electrooxidized porphyrins. This chapter presents an overview of this new method of electropolymerization.

  • Peripherally Metallated Porphyrin Derivatives : Approaches and Properties

    Sébastien Richeter, Christophe Jeandon, Jean-Paul Gisselbrecht, Romain Ruppert
    Handbook of Porphyrin Science, Vol. 3 "Synthetic Methodology", Eds. Karl M. Kadish, Kevin M. Smith and Roger Guilard, pp.429-483, 2010 | Publiée le 1 janvier 2010
    Chapitre d'ouvrage

    During the last 15 years, the synthetic modifications of porphyrins and porphyrazines have evolved rapidly. Despite this progress, the chemistry of porphyrinoids bearing coordination complexes or organometallic fragments at their periphery is still much less developed than the coordination chemistry using the apical positions of the central metal ions or remote coordination sites. The two latter types of coordination chemistry are much easier to perform from a synthetic point of view. However, transition metal-based synthetic chemistry is improving rapidly, allowing the introduction of functionalities, mainly heteroatoms or boron derivatives, at the periphery of aromatic rings. The coordination chemistry or organometallic chemistry that links together two large porphyrinoids while simultaneously allowing large electronic or magnetic interactions between these macrocycles is still limited to a few examples. The synthesis of di- or polyfunctionalized porphyrins must be developed. The inorganic chemistry around the metal ion linkages also needs to be improved and varied to give new compounds with potentially new properties. Finally, once the molecular chemistry is well understood, the chemistry of new molecular materials will need to be developed toward polymeric species.

  • Communication dans un congrès
  • Development of AEM Electrolysis as Part of the DAEMONHYC Project: Some Points of Understanding

    Garance Cossard, Julie Guehl, José Carlos Martinez Rosales, Xin Shen, Ying Sun, Tristan Asset, Gwénaëlle Kerangueven, Alexandr Oshchepkov, Elena Savinova, Vasilica Badets, Laurent Ruhlmann, Antoine Bonnefont, Eric Sibert, Marian Chatenet, Frédéric Maillard, Linda Chikh, Thi Khanh Ly Nguyen, Nadège Dib, Mohamed Mallouki, Odile Fichet, Jérôme Dillet, Giuseppe Sdanghi, Sophie Didierjean, Feina Xu, Tien Dung Le, Léa Droguet, Rémi Bligny, Nicolas Richet, Arthur Mofakhami, Gaël Maranzana
    248th ECS Meeting, The Electrochemical Society, Oct 2025, Chicago (Illinois), United States | Publiée le 12 octobre 2025
    Communication dans un congrès

    As part of the DAEMOHYC project funded by the French government, we are developing alkaline anion exchange membrane electrolysis without platinum group materials, down to the 25cm2 single cell scale. Our consortium comprises five university laboratories and two industrial partners. Our strategy is to explore different ways of shaping materials, from the simplest, cheapest and most robust to the most performing, expensive and complex. For example, for the anode, we began by considering the use of simple activated stainless steel felts, without the use of ionomer [1]. We then textured these felts and decorated them with cobalt spinels. The advantage of this shaping method is the robustness of the resulting electrodes and their good electronic conductivity, compared with electrodes obtained by ink deposition. The disadvantage is their low ionic conductivity, which essentially depends on the KOH concentration within the electrode. We have demonstrated that it is possible to increase the KOH concentration within the electrode thanks to the system architecture (dry cathode operation) and the good management of mass transport (PTL permeability), so as to maintain a pH gradient between the electrode and the feeding channels. Experimental studies combined with modeling work have enabled us to define stability domains for the various materials used, and to deduce optimal system control parameters (temperature, electrolyte pH, pressures, flow rates, clamping stress). In this presentation, we propose to take stock of the various advances made in the DAEMONHYC project in terms of materials, shaping, modeling and testing on the scale of the 25cm2 single cell. The idea is to share some insights that will help those involved in anion exchange membrane electrolysis to define their R&amp;D strategy.

  • Chemical aspects of allergic contact dermatitis

    Elena Gimenez-Arnau
    Conférencier invité. School of Pharmacy and Pharmaceutical Sciences. Trinity College Dublin, Ireland., Sep 2025, Dublin (IR), Ireland | Publiée le 16 septembre 2025
    Communication dans un congrès

  • CH2F analogue of MEcPP, synthesis and inhibiton of IspG enzyme as novel antimicrobial target

    Vivien Herrscher, Clea Witjaksono, Hannah Jobelius, Myriam Seemann, Jean-Bernard Behr
    Journée des Glycosciences du bassin parisien, Tania Xavier; Michael Bosco; Patricia Busca, Jun 2025, Paris, France | Publiée le 5 juin 2025
    Communication dans un congrès

    The identification of novel therapeutic targets represents a promising approach to overcome the emergence of antimicrobial resistance, which poses a major public health concern. In this context, the 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway, involving seven enzymes, leads to the two key isoprenoid precursors. The absence of this biosynthetic pathway in humans, but its presence in most pathogenic microorganisms, make these enzymes interesting targets for the development of antimicrobial agents.[1] Our work focuses on IspG, a metalloenzyme that catalyzes the conversion of 2-C-methyl-D-erythritol cyclodiphosphate (MEcPP, 1) into 4-hydroxy-3-methylbut-2-enyl diphosphate (HMBPP, 2). The formal mechanism of this transformation involves an initial cyclodiphosphate opening, resulting in a C-2 carbocationic intermediate 3 followed by radical and anionic species through two successive electron transfers. Here, we describe the synthesis and biological assays of a 2-CH2F analogue of MEcPP (fMEcPP, 4) as a potential inhibitor of IspG, in continuation of our previous studies on MEcPP analogues.[2] fMEcPP 4 was designed to enter the enzymatic transformation to yield a C-2 carbanionic intermediate, which could potentially lead to fluorine elimination. 1) (a) M. Rohmer, M. Seemann, S. Horbach, S. Bringer-Meyer, H. Sahm, J. Am. Chem. Soc. 1996, 118, 2564–2566. (b) M. Rohmer, Nat. Prod. Rep. 1999, 16, 565–574. (c) A. Allamand, T. Piechowiak, D. Lièvremont, M. Rohmer, C. Grosdemange-Billiard, Molecules 2023, 28, 1403. 2) (a) V. Herrscher, C. Witjaksono, M. Buchotte, C. Ferret, F. Massicot, J.-L. Vasse, F. Borel, J.-B. Behr, M. Seemann, Chem. Eur. J. 2022, 28, e202200241. (b) B. Simonet, V. Herrscher, C. Witjaksono, P. Chaignon, F. Massicot, J.-L. Vasse, M. Seemann, J.-B. Behr, J. Org. Chem. 2023, 88, 15832–15843.

  • Designing stable luminescent copper(I) complexes

    Béatrice Delavaux-Nicot, Jean-Franco̧is Nierengarten, Nicola Armaroli, Dominique Armspach
    6th International Caparica Conference on Chromogenic and Emissive Materials (IC3EM 2024), Jul 2024, Lisbonne, Portugal | Publiée le 7 juillet 2024
    Communication dans un congrès

  • Chalcogen Bonding Involving Tellurium

    Victor Mamane
    3rd International Conferences on Noncovalent Interactions (ICNI2024), Jun 2024, Belgrade, Serbia | Publiée le 17 juin 2024
    Communication dans un congrès

    <div><p>Chalcogen bond (ChB) is a non-covalent interaction, identified as such relatively recently, analogue to the now more common halogen bond (XB). Both are due to attraction between a nucleophilic entity (Lewis base) and an electrophilic region, called σ-hole, present on a halogen or a chalcogen atom. In contrast to monovalent halogens, chalcogen atoms exhibit two σ-holes due to their divalent character. Although comparable to hydrogen bond (HB) in term of strength, XB and ChB are highly directional in sharp contrast to HB. This interesting property has recently allowed the exploitation of ChB in many applications, including organocatalysis. As for XB, ChB strength depends on the polarizability of the chalcogen atom (S&lt;Se&lt;Te) and thus, chalcogen interactions involving tellurium are the strongest. Tellurium derivatives are thus becoming the most promising for applications based on σ-hole interactions. This presentation will focus on the latest results from our laboratory involving tellurium derivatives in solution with a special focus on noncovalent catalysis.</p></div>

  • Catalysis with telluronium cations: Chalcogen bond activation of imines and N-halosuccinimides

    Victor Mamane, Loïc Groslambert, Patrick Pale
    3rd International Conferences on Noncovalent Interactions (ICNI2024), Jun 2024, Belgrade (Serbia), Serbia | Publiée le 17 juin 2024
    Communication dans un congrès

    Noncovalent interactions based on σ-hole on halogen or chalcogen atoms have recently emerged and rationalized using the σ-hole concept.[1] Covalently bonded chalcogens exhibit an area with a positive electrostatic potential (the -hole) along the σ* orbitals allowing them to interact with a Lewis Base. Compared to halogen, chalcogen atoms like tellurium are able to promote multiple chalcogen bonds (ChBs). Applications based on ChBs have rapidly developed in recent years and significant progress has been made in the field of crystal engineering and more recently in catalysis.[2,3] Tellurium derivatives proved to be very effective as catalysts due to their strongest Lewis acidity compared to selenium and sulphur, but their use in catalysis is still scarce.[4] Furthermore, the study of these ChBs has been very limited in solution due to the weakness of these interactions. Thus, a better understanding of these interactions in solution would be of crucial interest, particularly for developing effective organocatalysts.[5,6] Telluronium salts were studied in our laboratory and have shown interesting and high catalytic properties in diverse reactions.[7] In the latter case, the trisubstituted charged tellurium can promote up to three ChBs. In this communication, some of our results concerning ChBs catalysis will be discussed. Indeed, a series of stable telluronium salts was synthesized and evaluated in various reactions:[8,9] halogenation, haloalkoxylation, haloesterification and aza-DielsAlder reaction such as Povarov-type reaction. Short time conversion, good to excellent yields were obtained for the different catalytic reactions without catalyst degradation. Through these different reactions, telluronium salts have demonstrated the ability to activate imines and N-halosuccimides (NXS) (Figure 1B). Moreover, those results were supported by NMR studies (125Te NMR titration) and crystallographic structures (formation of co-crystals between telluronium salts and several Lewis Bases).

  • Radicals & Allergic Contact Dermatitis: the Electron Paramagnetic Resonance point of view

    Bertrand Vileno, Elena Gimenez-Arnau
    Joint Meeting : 11th meeting of Immunotoxicology & Chemical Allergy (ITCASS) and the 30th meeting of European Research Group on Experimental Contact Dermatitis (ERGECD), European Research Group on Experimental Contact Dermatitis (ERGECD), Jun 2024, Liverpool, United Kingdom | Publiée le 12 juin 2024
    Communication dans un congrès

  • Cross-Linking coupled to mass spectrometry for structural elucidation of antimicrobial peptide complexes: example of PGLa/Mag2

    Emilie Hirschler, Elise Glattard, Yannis-Nicolas François, Burkhard Bechinger, Emmanuelle Leize-Wagner, Noelle Potier
    72nd Conference in Mass Spectrometry and Allied topics, Jun 2024, Anaheim, United States | Publiée le 2 juin 2024
    Communication dans un congrès

    Magainin2 and PGLa are small amphipathic antimicrobial peptides extracted from the skin of African clawed frogs. Both peptides exhibit antimicrobial properties on their own but when added in cocktail form, they show a synergistic effect in their antibiotic behavior. Many efforts have been made to characterize the structure of a potential PGLa/Mag2 complex and to correlate structural features with function. Models proposed the formation of supramolecular peptide complexes at the membrane surface inducing the lipid bilayer destabilization until the pathogen dies. We propose here to use a cross-linking/mass spectrometry approach to help the characterization of such highly dynamic entities both in a detergent- or liposome environment in order to grasp possible heteromeric complexes and obtain proximity information between amino acids. Methods : Cross-linking experiments were performed either in a detergent medium with 0.025% dodecylmaltoside (DDM) in Hepes buffer or in a lipid medium consisting of 3:1 POPE:POPG vesicles. Disuccinimidyl suberate DSS was used as cross-linker. The cross-linking reaction was followed by MALDI-MS and cross-linked peptides were analyzed by nanoliquid chromatography (Easy-nLC 1000, Thermofisher) coupled to MS (QExactivePlus, ThermoFisher) or by capillary electrophoresis (Beckmann CESI 8000) coupled to MS (TTOF 5600+AB Sciex). The cross-linking products were analyzed both without- and after digestion with trypsin, chymotrypsin or thermolysin. Data interpretation of the cross-linking sites was done using pLink2 (pFindStudio). Données préliminaires : MALDI-MS allowed to easily follow the cross-linking reaction in DDM by showing the masses of the cross-linked products. Thus, a mass of 4571.6 Da proved the existence of a cross-linked heterodimer in solution. Interestingly, such heterodimer is only observed when the cross-linking reaction occurred under membrane mimetic environment showing that a proper folding of the peptides is required for dimer formation. Circular dichroism assured that both peptides were structured as alpha-helices as expected in both media. The heterodimer was observed even at low concentration (1 µM), consistent with a specific interaction between PGLa and Mag2 rather than resulting from aggregation. The cross-linker also reacted with the monomers and the cross-linked sites were identified using pLink2. The results indicate that all lysines of both peptides can be affected by the cross-linker even at low peptide/DSS ratio (1/5) as well as serines and the N-terminal amino acid. Performing the cross-linking experiment in lipidic vesicles, appeared much more difficult in term of cross-linking efficiency even at high peptide/DSS ratio (>1/100), although the heterodimer was still the only multimeric detected species. Identifying intermolecular crosslinking sites also proved surprisingly difficult, as the heterodimer exhibited non-classical behavior in nanoLC, perhaps due to its amphipathic property. This feature, combined with the low ion abundance of the heterodimer, resulted in no fragmentation spectra. We are currently testing strong cation exchanger cartridges (SCX) to enrich our samples. To overcome this difficulty, tests were also carried out using capillary zone electrophoresis (CZE) as an orthogonal separative method to nanoLC. In CZE, no retention phenomena are involved, the separation is simply based on the charge and size of the peptides. Promising preliminary results are obtained since unmodified and cross-linked monomers eluted separately and we are optimistic that MSMS spectra could be relevant for intermolecular cross-linked ions after enrichment on SCX cartridges.

  • Unravelling the localization of counter-ions in ionic self-assemblies on a HOPG surface

    Jean Joseph, Frank Palmino, Judicaël Jeannoutot, Jésus Raya, Mathilde Berville, Jean Weiss, Jennifer A Wytko, Frédéric Cherioux
    GDR New Molecular Electronics, Oct 2023, LILLE, France | Publiée le 16 octobre 2023
    Communication dans un congrès

    Adsorption of supramolecular networks is considered a useful technique to tune the electronic properties of the underlying surfaces. Organic molecules with the highest occupied molecular orbital (HOMO) and the lowest unoccupied molecular orbital (LUMO) at suitable positions with respect to the Fermi level of underlying surfaces can be used to dope surfaces. The degree of doping is strongly driven by the on-surface organization of adsorbed molecules. Among all π-conjugated molecules, redoxactive viologens (or 4,4’-bipyridiniums) with low-lying LUMOs have emerged as promising candidates to address this major challenge.<br&gtAtomic force microscopy (AFM) is a commonly used method to investigate the self-organization of molecules on surfaces under ambient conditions at the sub-molecular level. However, in the case of organic salts, such as viologens, the position of the organic cations is well determined whereas the position of the corresponding anions has been less investigated mainly because these anions are often smaller than organic cations. The role of electrostatic interactions between anions and cations is essential to the understanding of on-surface organization. These electrostatic interactions strongly depend on the relative positions of the charged species and require the precise determination of the positions of both the cations and the anions. Whereas attempts to combine solid state NMR (ssNMR) with optical microscopy have been successfully reported for liquid crystalline viologen derivatives, the complementarity of ssNMR and AFM was neither established nor reported. This work describes an original strategy, based on a combination of AFM images and ssNMR, to unravel the position of anions and cations in organic salts deposited on a highly-oriented pyrolytic graphite (HOPG) surface. This simple strategy shows that ssNMR can quickly indicate the tendency of building blocks to organize efficiently prior to AFM studies.<br&gtWe have combined ss-NMR spectroscopy and AFM topography images to obtain a complete picture of the supramolecular self-assemblies of organic salts on an HOPG surface. This original, simple and efficient method paves the way to the construction of supramolecular self-assembled nanostructures with promising electronic properties.

  • Development of efficient DGT binding gels for uranium based on molecular coordination chemistry

    Michel Meyer, Osian Fonquernie, Tony Fernandes, Stéphane Brandès, Jean-Claude Chambron, Florian Brulfert, Charlotte Lafont, Olivier Diez, Cyrielle Jardin, Alkiviadis Gourgiotis, Laureline Fevrier, Steffen Happel, Josep Galceran, Josselin Gorny
    7th Conference on Diffusive Gradients in Thin Films (DGT 2023), Josselin Gorny; Hao Zhang, Oct 2023, Fontenay-aux-Roses, France | Publiée le 11 octobre 2023
    Communication dans un congrès

    The Diffusive Gradient in Thin-films (DGT) technique has been developed in the 1990’s with field applications that were initially limited to measuring some transition metals at trace levels in aquatic environments. Since then, a very active community of researchers have progressively created numerous binding gels with different selectivity permitting to cover almost all elements of the periodic table. However, for some elements like uranium, binding gels able to accumulate U(VI) in all types of media (river waters, sea water, soils, sediments) are still not available. Among the sixteen DGT methods developed so far for UO22+, the commercially available samplers containing either the Chelex-100 resin (polystyrene matrix functionalized with iminodiacetic acid chelating groups) or Metsorb material (TiO2-based adsorbent) are the most employed. Depending on the deployment conditions, their performances to determine the labile U(VI) concentration in aquatic environment can be unsatisfactory because these DGT samplers are not selective to UO22+ and the binding sites may become saturated by competing ions.1,2 In this study, we propose to improve the DGT sampling of labile UO22+ species by employing a new strategy that relies on the knowledge of the U coordination chemistry and the development of ligands targeted for this specific element. New binding agents, including a siderophore, with strong complexation capacity for iron and actinides3–5 were grafted on a carboxylic resin and incorporated in an agarose hydrogel for their use in DGT samplers. Laboratory validation experiments were performed in simple solutions (10 mmol L–1 NaNO3 and 1 mmol L–1 NaHCO3), in which the prevailing U(VI) species are [UO2(CO3)3]4– and [UO2(CO3)2]2–. Then, time-series experiments were performed in complex matrices in which additional U(VI) species are present (i.e., Ca2UO2(CO3)3, [CaUO2(CO3)3]2–, [MgUO2(CO3)3]2– and/or [UO2(CO3)3]4–). After evaluating the DGT performances in the laboratory, a field test was finally performed in the Essonne River (Essonne, France). Results for the siderophore-based DGT sampler are compared to measurements performed with Chelex- and Metsorb-DGT samplers both in lab and in field.

  • Modelisation by DFT of the carbonylation of an epoxydes catalysed by a bi-porphirinic cages

    Jules Wolff, Christophe Gourlaouen
    Rassemblement des Chimistes Théoriciens du Grand-Est, ThéMoSiA, Jun 2022, Dijon, France | Publiée le 2 juin 2022
    Communication dans un congrès

    Nowadays in the perspectives of biomimicry, molecular cage regain interest. The catalytic activity of the bisCo(III) porphyrin molecular cage consisting in two free-base porphyrins connected by flexible linkers (CoCl)2-1 was studied in the synthesis of cyclic carbonates from CO2 and propylene oxide (PO)) with pyridine and DMAP as cocatalyst. However, during investigation the rate of the CO2 consumption was subject to some matters. In addition, the molecular cage was shown to be a catalyst of high yield for the studied reactions even without the planned co-catalyst, adding some questions on possible other co-catalysts. Moreover, it was shown that the bi-cage was more efficient to convert the epoxides compared to CoCl-TPP. To get more knowledges about the exact processes, quantum modelling calculations were performed to explore the paths of this reaction catalysed by pyridine, chloride or even triazoles present in the linkers of the cages. Molecular dynamics were also performed to observe the conformation evolution of the porphyrin. To do these simulations, we had to deal with the absence of parmaters for Co3+. The first DFT computations shown the necessity of a catalyst for this reaction as well such as DMAP but not pyridine. These computations were also made on porphyrin model and the best paths for each catalyst were computed. The dynamics was started with Co(III) substitutes and explored the conformational flexibility of the cage to validate the hypothesis made for the QM calculations. The understanding of the reactional mechanism and the role played by the different reactants pave the way for the design of a new catalyst.

  • 2-vinyl and 2-cyclopropyl analogues of MEcPP as inhibitors of IspG, a target for new antimicrobials

    Vivien Herrscher, Clea Witjaksono, Fabien Massicot, Jean-Luc Vasse, Myriam Seemann, Jean-Bernard Behr
    GFG 2022, May 2022, Branville, France | Publiée le 30 mai 2022
    Communication dans un congrès

    The 2-C-methyl-d-erythritol 4-phosphate (MEP) pathway constitutes an essential biosynthetic route towards key precursors of all isoprenoids in most pathogenic microorganisms. It encompasses seven sequential transformations catalyzed by enzymes which are not present in mammals. As new therapeutic targets, enzymes of the MEP pathway offer opportunities to overcome standard antibiotic-resistant infections.[1] Our work focused on IspG (GcpE), a metalloenzyme involved in the penultimate step of this pathway, which catalyzes the conversion of 2-C-methyl-d-erythritol 2,4cyclodiphosphate (MEcPP, 1) into 4-hydroxy-3-methylbut-2-enyl diphosphate (HMBPP, 2) (Fig. 1). The formal mechanism of the reaction involves cyclodiphosphate-ring opening to produce an initial C-2 carbocationic intermediate (3), which would evolve towards corresponding radical and carbanion species after sequential electron transfers. Characterization of these possible intermediates could be facilitated with the aid of molecular tools such as substrate analogues. Here, we describe the synthesis and biological evaluation of the vinyl-analogue of MEcPP 4 as a possible substrate, which could enter the first steps of the transformation to form the corresponding conjugated intermediates (carbocation, radical or carbanion). Delocalization would stabilize the transient species and shift reactivity away from C-2 to provide new reactive centers, which might be covalently trapped by neighbouring amino acid residues. In a same manner the cyclopropyl-analogue of MEcPP 5 could afford a methyl-cyclopropyl radical, which would lead to rearrangement products in the reaction mixture. 1. (a) Herrscher, V.; Witjaksono, C.; Buchotte, M.; Ferret, C.; Massicot, F.; Vasse, J.-L.; Borel, F.; Behr, J.-B.; Seemann, M. Chem. Eur. J., 2022, under press (10.1002/chem.202200241). (b) Rohmer, M; Seemann, M; Horbach, S; Bringer-Meyer, S; Sahm, H, J. Am. Chem. Soc. 1996, 118 (11), 2564-2566. (c) Rohmer, M, Nat. Prod. Rep. 1999, 16 (5), 565-574.

  • Activité anti et prooxydante de l'eugénol et de l'isoeugénol dans la peau : compréhension par étude de l'implication d'intermédiaires radicalaires

    E Giménez-Arnau, B. Vileno, Yannick Port-Lougarre
    18ème RECOB (Rencontres de Chimie Organique Biologique), Mar 2022, Aussois, France | Publiée le 20 mars 2022
    Communication dans un congrès

    L'eugénol et l'isoeugénol sont des composés odorants présents dans de nombreuses huiles essentielles, utilisés dans les cosmétiques et la parfumerie. Aussi, l'eugénol est employé dans les soins dentaires de par ses propriétés analgésiques et antiseptiques. 1 Ces deux composés sont caractérisés pour (i) leurs propriétés antioxydantes-cytoprotectrices (e.g., pathogènes alimentaires 2), mais aussi (ii) leurs activités cytotoxiques-prooxydantes bien connues des dermatologues spécialisés en allergie de contact, ce qui contraint l'industrie à étiqueter leur présence sur les produits manufacturés. 3 La présence du noyau de type catéchol est certainement à l'origine de ces propriétés. Ce groupement catéchol peut, en effet, être oxydé aisément en radical phénoxy (PhO .) tout en réduisant des radicaux libres réactifs. 4 Cependant, suite à cette action antioxydante, les PhO. peuvent former des radicaux carbonés ensuite par délocalisation électronique sur le noyau aromatique. Ces radicaux pourraient être alors susceptibles de réagir avec des protéines 5 de la peau pour former un complexe antigénique enclenchant une réponse immunitaire (i.e., allergie de contact). L'objectif de ce travail est d'investiguer la formation potentielle de ces radicaux carbonés et de comprendre leurs mécanismes d'action dans la peau. C'est au travers de la résonance paramagnétique électronique (RPE) et du piégeage de spin sur des modèles d'épidermes humains reconstitués (RHE), histologiquement similaires à la peau humaine, qu'il est possible d'évaluer ce qui pourrait se passer in vivo dans des conditions proches d'une exposition humaine (Figure 1). Il a notamment été possible de prouver la formation de radicaux carbonés issus des deux composés dans des RHE irradiés à l'aide d'un simulateur solaire.

  • Improving the performances of Diffusive Gradient in Thin-films (DGT) technique to measure the labile uranyl concentration in environmental waters by employing the chelating properties of siderochelates

    Josselin Gorny, Charlotte Lafont, Florian Brulfert, Osian Fonquernie, Tony Fernandes, Stéphane Brandes, Jean-Claude Chambron, Steffen Happel, Olivier Diez, Cyrielle Jardin, Alkiviadis Gourgiotis, Laureline Fevrier, Josep Galceran, Charlotte Cazala, Michel Meyer
    International Symposium on Metal Complexes, ISMEC 2022, 2022, VALENCE, Spain | Publiée le 1 janvier 2022
    Communication dans un congrès

    Uranium (U) presents a unique challenge for ecological risk assessments around installations related to the nuclear fuel cycle because of both chemical and radiological toxicity. Their relative importance depends on the chemical speciation and isotopic composition of the radionuclide, the latter being strongly correlated to its natural or anthropogenic origin (enriched or depleted U) [1]. In this framework, the Diffusive Gradient in Thin-films (DGT) technique is an appealing tool for monitoring the water quality around uranium processing plants, nuclear facilities or mining areas. Indeed, the DGT sampling allows to preconcentrate in situ the labile U(VI) species, allowing to simultaneously characterize the labile UO22+ fraction in aqueous phase (i.e., this provides qualitative information on the "available stock of UO22+ for the aquatic organisms") and the isotopic composition at trace levels [2]. Among the eleven DGT methods developed for UO22+ [3], the ones containing Chelex-100® (an ion-exchange resin with iminodiacetic acid functional groups) or Metsorb® (a TiO2-based adsorbent) are the most employed due to their commercial availability. Nevertheless, their performances can be significantly degraded by high concentration levels of competing ions like Ca2+ in the deployment solution, which results in the underestimation of the overall concentration of labile U(VI) species in environmental waters [3, 4]. To improve the reliability of measurements, further analytical developments are therefore required. One important research direction includes the design of more selective UO22+ sorbent materials.In this study, we propose new DGT samplers for labile UO22+ species that incorporate novel complexing materials obtained by the covalent grafting of siderophore-like chelators on a hydrophilic organic resin. Siderophores are well-known to exhibit a high affinity for strong Lewis acids, such as iron(III) and actinide cations [5-7]. Rigorous laboratory validation of the new DGT devices was conducted, confirming the suitability of the samplers to quantitatively measure all UO22+ species in simple matrices in which UO22+-CO32– complexes dominate the speciation of U. In addition, cross-tests were performed with commercial Chelex-100® and Metsorb® based-DGT devices on several types of moderately basic waters (pH ≈ 8), either in the laboratory (i.e., soft and hard mineral waters and seawater) or during field tests. DGT probes were deployed in the alkaline surface water of the Œuf River, a tributary to the Seine River (France), in which Ca2+-UO22+-CO32– complexes are the dominant U species according to speciation modelling calculations. These experiments highlighted the superiority of the new DGT devices over those incorporating either Chelex-100® or Metsorb® sorbents. Finally, thermodynamic speciation calculations were performed as a first approach to better understand the functioning and potential limitations of our new and Chelex-100®-based DGT samplers in different deployment conditions.Acknowledgements:This work has been supported by IRSN, CNRS, and the French grant agency Agence Nationale de la Recherche (project PLUTON, grant n° ANR-17-CE08-0053). Osian FONQUERNIE and Tony FERNANDES are grateful to the Conseil Régional de Bourgogne Franche-Comté and the European Regional Development Fund (FEDER) for granting them a PhD fellowship. The authors thank Graver Technologies (www.gravertech.com) for the provision of the Metsorb® HMRP 50 products used in this study. All DGT experiments were performed at LUTECE (the SEDRE's experimental platform), and isotopic measurements at PATERSON (the IRSN's mass spectrometry platform). This work benefited from the knowledge acquired on the spatial and temporal distribution of U concentration in the Œuf-Essonne River through the research project UTOPIA conducted by Dr Mathilde ZEBRACKI (IRSN) and funded by the French program NEEDS.References:[1] T. Mathews, K. Beaugelin-Seiller, J. Garnier-Laplace, R. Gilbin, C. Adam, C. Della-Vedova, Environ. Sci. Technol. 2009, 43, 6684-6690[2] G. S. C. Turner, G. A. Mills, M. J. Bowes, J. L. Burnett, S. Amos, G. R. Fones, Environ. Sci.: Processes Impacts 2014, 16, 393-403.[3] V. Smolíková, P. Pelcová, A. Ridošková, M. Leermakers, Talanta 2022, 240, 123168.[4] G. S. C. Turner, G. A. Mills, P. R. Teasdale, J. L. Burnett, S. Amos, G. R. Fones, Anal. Chim. Acta 2012, 739, 37-46.[5] M. P. Neu, J. H. Matonic, C. E. Ruggiero, B. L. Scott, Angew. Chem. Int. Ed. 2000, 39, 1442-1444.[6] H. Boukhalfa, G. A. Icopini, S. D. Reilly, M. P. Neu, Appl. Environ. Microbiol. 2007, 73, 5897-5903.[7] L. Février, F. Coppin, S. Pierrisnard, M. Bourdillon, L. V. Nguyen, N. Zaiter, S. Brandès, V. Sladkov, J.-C. Chambron, M. Meyer, J. Environ. Radioact. 2021, 235-236, 106645.

  • High-Performance Direct Borohydride Fuel Cells Using Non-PGM Electrocatalysts

    Guillaume Braesch, Marian Chatenet, Alexandr G. Oshchepkov, Antoine Bonnefont, Gaël Maranzana, Zhongyang Wang, Shrihari Sankarasubramanian, Vijay Ramani, Pietro G Santori, Frederic Jaouen, Elena Romanovna Savinova
    238th Meeting of the Electrochemical Society - PRiME 2020 meeting, Oct 2020, Honolulu, United States | Publiée le 4 octobre 2020
    Communication dans un congrès

  • “Implantation ionique et Résonance Paramagnétique Electronique : des outils clés pour les technologies quantiques.” J. Tribollet. Invited talk at the ICube Laboratory (campus de Cronenbourg), in Strasbourg (France), 10 jan. 2020.

    Jérôme Tribollet
    Séminaire du Laboratoire ICube, Sep 2020, Strasbourg, France | Publiée le 10 septembre 2020
    Communication dans un congrès

    Les principales technologies quantiques sont les ordinateurs quantiques, les capteurs quantiques et les systèmes de communication quantique. Dans ce séminaire, je présenterai rapidement ces différentes technologies quantiques, rappelant leurs principes généraux, quelques voies possibles pour leur réalisation pratique, et leurs applications envisagées. Parmi l’ensemble des systèmes physiques envisagés pour réaliser ces diverses technologies quantiques, les centres colorés paramagnétiques des semiconducteurs à grand gap, comme le SiC et le Diamant, ont l’avantage de la polyvalence, c’est-à-dire de pouvoir être appliqués à ces trois types de technologies quantiques mais dans des architectures ou environnements différents. Les techniques d’implantation ionique sont actuellement les principales méthodes utilisées pour créer ces centres colorés paramagnétiques dans les solides, soit de façon à créer des centres colorés isolés dans des nanostructures photoniques, pour les capteurs quantiques et les sources de photons uniques, soit de façon à créer des réseaux réguliers de centres colorés, principalement pour les ordinateurs quantiques. Je discuterai les challenges de la fabrication par implantation ionique que sont le positionnement suffisamment précis des ions dans leur environnement ainsi que le contrôle de la dose délivrée, en particulier quand il s’agit d’implanter un ion unique en un site donné dans un dispositif quantique. La spectroscopie de Résonance Paramagnétique Electronique (RPE), la photoluminescence (PL), ainsi que la spectroscopie combinant RPE et photoluminescence appelée Résonance paraMagnétique Détectée Optiquement (ODMR), sont les principales méthodes de caractérisation post implantation de ces centres colorés dans les solides. Elles permettent à la fois de les identifier spectroscopiquement, de les quantifier, et via la RPE et l’ODMR, de déterminer leur environnement local et les propriétés de cohérence quantique de leurs spins. La RPE impulsionnelle est également actuellement la méthode privilégiée de contrôle cohérent des bits quantiques de spins dans les solides. Je présenterai donc également une introduction à la RPE, à l’ODMR, et à l’étude de la cohérence quantique des spins. Mon exposé visera donc à montrer que l’implantation ionique, la RPE et les centres colorés dans les semiconducteurs à grand gap ont un bel avenir en commun, non seulement dans le contexte du traitement quantique de l’information qui est un objectif à long terme, mais aussi et à plus court terme, dans d’autres domaines comme la biologie structurale et le photovoltaique, au travers du développement de capteurs quantiques ultra-sensible à résolution spatiale nanométrique.

  • Allosteric Modulators of CDK4 for Lung Cancer Therapeutics

    May Catherine Morris, Frédéric Bihel, Sebastien Diot, Clovis Peter, Céline Bouclier, Jacques Bricard, Morgan Pellerano, Malik Hellal, Camille Prevel
    Annual Meeting on Experimental Biology, The Federation of American Societies for Experimental Biology (FASEB), Apr 2020, San Diego (California), United States. pp.1-1, ⟨10.1096/fasebj.2020.34.s1.00334⟩ | Publiée le 4 avril 2020
    Communication dans un congrès

    Lung cancer is the leading cause of cancer‐related death worldwide. CDK4/Cyclin D kinase is a key cell cycle regulator and constitutes an attractive pharmacological target for development of anticancer therapeutics, in particular in KRAS‐mutant lung cancer. Although several ATP‐competitive inhibitors targeting protein kinases have been developed as anticancer therapeutics, including several recently FDA‐approved CDK4 inhibitors, these compounds suffer from limited efficacy, selectivity and toxicity due to their conventional mechanism of action. Alternative strategies to overcome limitations associated with conventional kinase inhibitors include targeting protein/protein interactions and conformational transitions which are essential for kinase activation. Using a CDK4‐specific conformational biosensor that discriminates against ATP‐pocket binding compounds and that we implemented to screen a small chemical compound library of original small molecule scaffolds, we identified and validated a druggable and patentable compound that tampers with CDK4 function. This compound inhibits Rb phosphorylation, blocks proliferation of several cancer cell lines, and does not bind the ATP pocket of CDK4 nor any of 456 other kinases. An ongoing hit‐optimization process led us to identify derivatives exhibiting greater anti‐proliferative activity than Abemaciclib or Palbociclib in the A549, KRAS‐mutated NSCLC cell line. Interestingly, these non‐ATP CDK4 inhibitors only have a cytostatic effect, and do not induce cytotoxicity even at high doses. Further studies aimed at characterizing the mechanism of action of this compound have highlighted an unexpected and atypical mechanism of inhibition targeting CDK4. Our compounds constitute attractive leads as next generation of CDK4‐specific inhibitors and lung cancer therapeutics. Support or Funding Information This work was supported by the SATT Connectus, Strasbourg France and awarded the 2019 Best Academic Project of MATWIN (https://matwin.fr/en/cdk4ppi‐awarded‐2019‐best‐academic‐project‐by‐the‐matwin‐international‐board/)

  • “First optically detected and optical pumping assisted pulsed Electron Paramagnetic Resonance experiments on room temperature quantum coherent spins qubits in Silicon Carbide : towards SiC quantum technologies.”. J. Tribollet. Talk at the "Journées Scientifiques de l'Institut de Chimie" - UMR 7177, Strasbourg, FRANCE, oct. 2019.

    Jérôme Tribollet
    Journées Scientifiques de l'Institut de Chimie" - UMR 7177, Strasbourg, FRANCE, Oct 2019, Strasbourg, France | Publiée le 29 octobre 2019
    Communication dans un congrès

    In this talk I will present some of my recent experimental results towards the development of SiC based future quantum technologies like quantum computing and quantum sensing, with potential applications in structural biology, surface chemistry and molecular monolayer magnetism. This will include a rapid presentation of my first optically detected and optical pumping assisted pulsed Electron Paramagnetic Resonance experiments on room temperature quantum coherent spins qubits in silicon carbide (50 μs spin coherence time at 300K) and a short discussion of the perspectives of this work.

  • Electron impact ionization of pyrimidine: differential and total cross sections

    L. Mouawad, P.A. Hervieuxt, C. Dal Cappello, J. Pansanel, V. Robert, Z. El Bitar
    31st International Conference on Photonic, Electronic, and Atomic Collisions, Jul 2019, Deauville, France. pp.152073, ⟨10.1088/1742-6596/1412/15/152073⟩ | Publiée le 23 juillet 2019
    Communication dans un congrès

    We provide theoretical cross sections for the ionization of pyrimidine by electron impact. The theoretical framework is based on a quantum approach making use of particular tools to overcome the computing challenges. The developed methodology allows to determine not only the total but also the triple, double and simple differential cross sections. This approach was previously used to calculate the triple differential cross sections of many molecules. Here, we demonstrate that it can be used to calculate more integrated cross sections of a molecule of biological interest: pyrimidine.

  • A quantum approach to calculate differential and total cross sections for electron impact ionization of molecular targets

    L. Mouawad, P.A. Hervieux, C. Dal Cappello, J. Pansanel, V. Robert, Z. El Bitar
    31st International Conference on Photonic, Electronic, and Atomic Collisions, Jul 2019, Deauville, France. pp.152074, ⟨10.1088/1742-6596/1412/15/152074⟩ | Publiée le 23 juillet 2019
    Communication dans un congrès

    We present a theoretical approach to calculate the cross sections for the ionization of molecules by single electron impact. It is based on the First Born approximation (FBA), describing the ejected electron by a distorted wave (DW). The cross sections are calculated for an average molecular orientation with the proper average method. Single-center molecular wave functions are generated using Gaussian making this method easily applicable to any molecule. We show the calculated cross sections of some molecular targets of varying complexity.

  • Formation of radicals from sensitizing organic peroxides in a 3D epidermis model: an EPR spin-trapping study for ascaridole. 28th Meeting of the European Research Group on Experimental Contact Dermatitis, Darmstadt, Germany

    Fatma Sahli, Bertrand Vileno, Philippe Turek, Jean-Pierre Lepoittevin, Elena Giménez-Arnau
    28th Meeting of the European Research Group on Experimental Contact Dermatitis, Darmstadt, Germany, Nov 2018, Darmstadt, Germany | Publiée le 1 novembre 2018
    Communication dans un congrès

  • Human skin sensitization potential and potency of terpene hydroperoxides in the HaCaT/THP-1 cocultured activation test (COCAT). 14th Congress of the European Society of Contact Dermatitis, Milano, Italie

    Brunhilde Bloemeke, Mario Schellenberger, Jennifer Hennen, Ms Somaibach, Fatma Sahli, Jutta Lichter, Jean-Pierre Lepoittevin, Elena Giménez-Arnau
    14th Congress of the European Society of Contact Dermatitis, Milano, Italie, Oct 2018, Milano, Italy | Publiée le 1 octobre 2018
    Communication dans un congrès

  • Stable isoporphyrin copolymer: Electrochemical mechanism and behavior and photovoltaic properties

    Moussa Boudiaf, Yiming Liang, Raphaël Lamare, Jean Weiss, Helen Ibrahim, Michel Goldmann, Embarek Bentouhami, Vasilica-Adriana Badets, Sylvie Choua, Nolwenn Le Breton, Pierre-Antoine Bonnefont, Laurent Ruhlmann
    Electrochemistry from Knowledge to Innovation (ISE 2018), 69th Annual ISE Meeting, 2-7 September 2018, Bologna, Italy, Sep 2018, Bologne, Italy. pp.432-449, ⟨10.1016/j.electacta.2019.04.050⟩ | Publiée le 1 septembre 2018
    Communication dans un congrès

  • Rational design of kisspeptin analogs for the control of reproduction

    T.M. Vishwanatha, C. Decourt, V.P. Terrier, V. Robert, M. Galibert, J.-B. Madinier, P. Marceau, Hugues Dardente, D. Lomet, A.F. Delmas, A. Caraty, Massimiliano Beltramo, V. Aucagne
    4th Belgian Peptide Group Meeting, Feb 2018, Bruxelles, Belgium | Publiée le 28 février 2018
    Communication dans un congrès

  • Effect of 5 years of imaging and CEA follow-up to detect recurrence of colorectal cancer - PRODIGE 13 a FFCD and Unicancer phase III trial: baseline characteristics

    C. Lepage, M. Phelip, L. Cany, E. Maillard, A. Lievre, T. Chatellier, R. Faroux, J-C. Duchmann, M. Ben Abdelghani, G. Breysacher, P. Geoffroy, D. Pere-Verge, A. Pelaquier, D. Pillon, J. Ezenfis, Y. Rinaldi, A. Darut-Jouve, M. Duluc, Antoine Adenis, O. Bouché
    41st Congress of the European-Society-for-Medical-Oncology (ESMO), Oct 2016, Copenhague, Denmark. pp.483P, ⟨10.1093/annonc/mdw370.31⟩ | Publiée le 7 octobre 2016
    Communication dans un congrès

    Background: PRODIGE 13 is a cooperative prospective multicentre controlled phase III trial evaluating by double randomisation the impact of intensive radiological monitoring versus a standard one and CEA monitoring versus no monitoring in Stage II or III colorectal cancer. This abstract describes patient's baseline characteristics. Methods: Recommendations for colorectal cancer, according to various scientific societies have been based on heterogeneous clinical trials, and indeed mainly on expert opinions. Differences still exist particularly concerning the imaging techniques used. The CEA dosage is also poorly evaluated. Despite their limits, recent trials suggest that survival is increased thanks to clinical monitoring combined with hepatic and pulmonary imaging and possibly CEA assay. PRODIGE 13 is a large randomised trial of monitoring strategy and will evaluate the strategies to...

  • Allergenic allylic hydroperoxides derived from linalool: chemistry through radical intermediates and translation into immune cell responses. The role of the Nrf2 pathway. 13th Congress of the European Society of Contact Dermatitis, Manchester, Royaume-Uni

    Elena Giménez-Arnau, Salen Kuresepi, Chloé Raffalli, Bertrand Vileno, Philippe Turek, Marc Pallardy, Jean-Pierre Lepoittevin, Saadia Kerdine-Römer
    13th Congress of the European Society of Contact Dermatitis, Manchester, Royaume-Uni, Sep 2016, Manchester, United Kingdom | Publiée le 1 septembre 2016
    Communication dans un congrès

  • Computational modeling and analysis of stable 14 electron hemichelated Pd-Cr complexes

    Dylan Anstine, Jean-Pierre Djukic
    251st ACS National Meeting & Exposition, San Diego, CA, United States, March 13-17, 2016, Mar 2016, San Diego, United States | Publiée le 13 mars 2016
    Communication dans un congrès

    In organometallic chem. the commonly known Sidgwick-Langmuir 18 electron rule is a general rule that describes ideal conditions for transition metal centers to be in the most stable configuration. Many 16 electron metal center complexes occur as exceptions to this rule and even fewer 14 electron complexes are known. The present study examines three sep. Pd-Cr complexes via d. functional theory (DFT) and addnl. post DFT anal. methods to analyze the stabilizing factors within these 14 electron complexes. Primarily examg. hemichelation; a method of stabilization in which ligands interact with the transition metal center via one dative bond and one noncovalent interaction. Anal. is constructed both from a stand point of electron d. distribution as well as the nature of orbital interaction. Results show that noncovalent interactions play a significant role in the stabilizing effects of air/moisture stable electron deficient transition metal center complexes. [on SciFinder(R)]

  • Valle Giumentina : stratigraphy and archaeology

    Elisa Nicoud, D. Aureli, M. Pagli, V. Villa, C. Chaussé, F. Fusco, G. Boschian, J.-Ph. Degeai, S. Agostini, J.-J. Bahain, T. Colonna, B. Giaccio, M. Hernandez, Catherine Kuzucuoğlu, Christelle Lahaye, C. Lemorini, N. Limondin-Lozouet, P. Mazza, N. Mercier, S. Nomade, A. Pereira, V Robert, M.A. Rossi, C Virmoux, A Zupancich
    Colloque Q10 AFEQ CNF-INQUA 2016 Paléoclimats et environnements quaternaires, quoi de neuf sous le soleil ?, 2016, Bordeaux, France | Publiée le 1 janvier 2016
    Communication dans un congrès

    Valle Giumentina : stratigraphy and archaeology

  • “EPR under the strong magnetic field gradient of a ferromagnetic nanostripes array: from nanosciences to structural biology". J. Tribollet, B. Vileno, P. Turek. Invited Talk at IXth Conference of European Federation of EPR Societies, Marseille (France), 7-11 sept. 2014

    Jérôme Tribollet, Bertrand Vileno, Philippe Turek
    IXth Conference of European Federation of EPR Societies, Sep 2014, Marseille, France | Publiée le 7 septembre 2014
    Communication dans un congrès

    In this talk, I will present recent experimental and theoretical results aiming at developing a new EPR tool and the associated new EPR spectroscopic methods, which should allow the future investigation of the magnetic and structural properties of paramagnetic nano-objects with nanoscale resolution. This new EPR tool combines standard continuous wave or pulse EPR spectroscopic tools, with the strong magnetic field gradient produced by an array of ferromagnetic nanostripes, placed in the immediate environment of the paramagnetic nanoobjects under study. Those paramagnetic nano-objects could be for example, paramagnetic defects in thin solid films or spin labeled proteins in biological matter. In the first part of this talk I will present the experimental study of arrays of permalloy ferromagnetic nanostripes by spin wave resonance spectroscopy. Then, I will show theoretically, how to interpret those complex spin wave resonance spectrum observed in those ferromagnetic nanostructures, and how to use it to indirectly probe the strong magnetic field gradient produced by those ferromagnetic nanostripes arrays in their immediate environment. In the second part of this talk, I will present the first experimental results towards the direct EPR measurement of the dipolar magnetic field produced by those ferromagnetic nanostripes arrays on nearby paramagnetic probes. Finally, I will conclude this talk by giving some possible examples of future applications of EPR under a strong magnetic field gradient. This will include applications in the field of structural biology and in the field of nanosciences.

  • The mechanism of biomass pyrolysis revealed by various analytical methods

    Yann Le Brech, Luc Delmotte, Jesus Raya, Nicolas Brosse, Sadio Cissé, Thierry Ghislain, Sébastien Leclerc, Yassine Elmay, Roger Gadiou, Guillain Mauviel, Colin Snape, Anthony Dufour
    PYRO 2014 (20th International Symposium on Analytical and Applied Pyrolysis), May 2014, Birmingham, United Kingdom | Publiée le 18 mai 2014
    Communication dans un congrès

    Numerous analytical methods are commonly used to reveal the mechanism of biomass pyrolysis: NMR, FTIR, GC/MS, etc. But all these methods are seldom combined under same biomass and heating conditions. Here we propose to combine the main cutting edge methods to understand biomass pyrolysis. Miscanthus pyrolysis is conducted under slow and fast pyrolysis conditions, with a good control of temperature history and quench of the solid. Mass transfer effects are carefully reduced by conducting pyrolysis in fixed bed reactor with a suitable flow rate of carrier gas. Then the following analyses are developed: (i) µGC for gas, (ii) GC*GC(heart-cutting)/MS-FID, SEC-MS and direct infusion high resolution MS for condensable products and intermediate species extracted by solvents from the char, (iii) high resolution 2D solid 1H-13C NMR, quantitative 1D 13C NMR and FTIR for the solid (biomass/biochar). Calorimetry and in-situ 1H NMR analyses [1] are also performed under similar thermal and mass transfer conditions as for high resolution NMR and MS analysis. During the talk, we will show how all these analytical methods are complementary and necessary to propose a generalized mechanism of biomass pyrolysis. [1] Dufour A., Castro-Diaz, M., Brosse N., Bouroukba M., Snape C.E., ChemSusChem, 7, 1258-1265, 2012.

  • “Study by Electron Spin Resonance of the spin wave resonances of a Permalloy ferromagnetic nanostripes array: towards spectrosopic applications in structural biology”. J. Tribollet, B. Vileno, P. Turek. Talk at the "Journées Scientifiques de l'Institut de Chimie" - UMR 7177, Strasbourg, FRANCE, jan. 2013.

    Jérôme Tribollet, Bertrand Vileno, Philippe Turek
    "Journées Scientifiques de l'Institut de Chimie" - UMR 7177, Strasbourg, FRANCE, jan. 2013, Jan 2013, Strasbourg, France | Publiée le 10 janvier 2013
    Communication dans un congrès

  • Molecular study of organic residues in an exceptional collection of potteries from Deir el-Médineh (XVIIIth dynasty, Egypt).

    Claire Bastien, Armelle Charrié-Duhaut, Geneviève Pierrat-Bonnefois,, Jacques Connan, Claude Le Milbeau, Jorge E. Spangenberg
    The 25th International Meeting on Organic Geochemistry, Sep 2011, Interlaken, Switzerland. 2p | Publiée le 18 septembre 2011
    Communication dans un congrès

    Within this study of molecular archaeology, an exceptional set of Egyptian organic remains stored in containers from Deir el-Médineh (XVIIIth dynasty), and put at disposal by the Department of Egyptian Antiquities of the Louvre Museum has been analyzed.

  • Paleocene-Eocene Thermal Maximum consequences on terrestrial environments. Insights from the evolution of organic matter in the Vasterival section (Dieppe-Hampshire Basin, France)

    Sylvain Garel, Johann Schnyder, Jérémy Jacob, Mohammed Boussafir, Christian Dupuis, Jean-Yves Storme, Johan Yans, Alina I. Iakovleva, Emile Roche, Claude Le Milbeau, Florence Quesnel
    CEBP 2011, Jun 2011, Vienne, Austria | Publiée le 6 juin 2011
    Communication dans un congrès

    The Paleocene-Eocene Thermal Maximum (PETM, 55.8 Ma, Aubry et al, 2007) is regarded as one of the most rapid global warming of the Cenozoic era, with temperature increase of 4-8°C in about 10-20 ka. Thus, it is often proposed as a potential analogue of future climatic conditions expected in the screenplays provided by the International Panel on Climate Change (IPCC). The PETM is recorded in both marine and continental deposits by an abrupt negative Carbon Isotope Excursion (CIE) associated with other sedimentary and biological anomalies. The consequences of the PETM in terrestrial environments are less documented than in marine ones. This limits our regional- and global-scale understanding of the impact of such a climate change on continents and the ecosystems response. This study focuses on the Vasterival section (Seine-Maritime, Upper Normandy) located in the southern part of the Dieppe-Hampshire Basin, in which the PETM is recorded in the organic matter (OM) by the negative shift in δ13Corg of the CIE, and confirmed by the stratigraphic record in this locality belonging to the Cap d'Ailly composite section (Dupuis et al., 1998). The 2 m thick section, which presents a notably well preserved OM, is mainly constituted by terrestrial sediments from lacustrine to coastal swamp environments and in which OM-poor clays are followed by OM-rich clays, centimetric lignite beds and clays with roots evidences. The uppermost part of the section is constituted by 50 cm thick lagoonal clay with shell debris that records the Apectodinium acme. Global organic geochemical, palynofacies and isotopic analyses were performed on thirty samples. The total organic carbon of this section is ranging from 0.5 % for OM-poor-clays to 45 % for lignite levels. Lipid biomarkers extracted from twenty five samples were quantified and their hydrogen and carbon isotopic composition were determined by GC-irMS. Important changes in palynofacies, biomarker assemblages and compound-specific isotopic data are coincident with the CIE onset interval. This is consistent with an important environmental modification in the Vasterival area during the Early Eocene that could be linked to the PETM climatic change.

  • Paleocene-Eocene Thermal Maximum consequences on terrestrial environments. Insights from the evolution of organic matter in the Vasterival section (Paris Basin, France)

    Sylvain Garel, Johann Schnyder, Jérémy Jacob, Mohammed Boussafir, Christian Dupuis, Jean-Yves Storme, Johan Yans, Claude Le Milbeau, Florence Quesnel
    4ème congrès français de stratigraphie, Aug 2010, Paris, France | Publiée le 30 août 2010
    Communication dans un congrès

    The Paleocene-Eocene Thermal Maximum (PTEM) is often proposed as an analogue of future climatic conditions expected in the screenplays provided by the International Panel on Climate Change (IPCC). The PETM is characterized by a 3°C estimated rise of global temperature and is recorded in marine and terrestrial deposits by a carbon isotopic excursion (CIE). Most of published works related to this paleoclimatic crisis focus on marine sediments. This presently limits our regional- and global-scale understanding of the impact of such a climate change in terrestrial environments and the deciphering of the ecosystems response. This study focuses on the Vasterival section (Seine-Maritime, Upper Normandy, France) located in the NW of the Paris Basin, and in which the PETM is recorded in the organic matter (OM) by the d13C negative shift of the CIE. The 2m thick section is mainly constituted by terrestrial sediments deposited in fluvial and lacustrine to coastal swamp environments and in which OM-poor shales are followed by OM-rich shales, centimetric lignite beds, paleosols, and two beds containing carbonate nodules. The uppermost part of the section is constituted by a 50cm thick shale with shell debris that attests to a lagoonal influence. This section is constantly refreshed by a little stream, thus facilitating the sampling of fresh material, notably a well preserved OM. Global geochemical, palynofacies and isotopic analyses focused on thirty samples, and seventeen lipid extracts were analyzed by gas chromatography-mass spectrometry. The association of these methods allows us to characterize the OM of the different deposits encountered. Sulfur contents are particularly high (up to 15% of S), thus indicating an euxinic depositional environment. Total Organic Carbon (TOC) varies from 1% for OM-poor shales and paleosols up to 45% for lignite levels. From Hydrogen Index (from 6 to 210 mg HC/g TOC), Oxygen Index (from 80 to 630 mgCO2/g TOC) and Tmax values (from 410 to 430°C) we can show that the OM is of Type III (terrestrial higher plants), and immature. These results are reinforced by palynofacies observations, as a large amount of ligno-cellulosic phytoclastes is present in most of the samples. In the uppermost shale the continuity of the PETM in marine deposits can be inferred by the presence of many Apectodinium species. Thus, the terrestrial deposits would represent a time interval that includes the uppermost Paleocene and the basal part of the PETM. Molecular analyses underline the contribution of terrestrial higher plants by the presence of long chain n-alcanes with odd-over-even predominance, and Onocerane I, a compound rarely detected in sediments, attests to a contribution of lycopods or plants affiliated to the genus Pseudofagus. A notable bacterial contribution is also inferred by the presence of hopanoids in the extracts. This is confirmed by organic petrography results that reveal alginites laminae, often interpreted as a witness of well-preserved bacterial and/or algal mats. From our early results we show that significant environmental changes are recorded during the CIE. High resolution analyses and complementary analyses (X-ray tomography, isotopic, thin section petrography...) are currently in progress. This approach is complemented by a sedimentological study and they both will be extended to other sites along a transect crossing the terrestrial to lagoonal paleoenvironments of the Paleocene-Eocene transition in the Paris Basin. They aim at defining possible spatial heterogeneities in the PETM's impact on terrestrial environments and ecosystems, at a regional scale. To the west of the transect, the Cap d'Ailly sections and core will be first studied, because of their position very close to the Vasterival site, the relative richness in outcrops and the continuation of the PETM recorded in around 10m of lagoonal deposits, comprising various facies often OM rich: tidal fine sand, silt and clay, shell beds, and few cemented carbonate beds.

  • When "dispersion" means "cohesion

    Jean-Pierre Djukic, Stefan Grimme, Tobias Schwabe, Isabella Hyla-Kryspin
    240th ACS National Meeting, Boston, MA, United States, August 22-26, 2010, Aug 2010, Boston, United States | Publiée le 22 août 2010
    Communication dans un congrès

    Non-covalent interactions are ubiquitous in Nature and their accurate description remains a difficult task. Van der Waals interactions, among which dispersion is the most intriguing attractive non-covalent interaction, contribute greatly to the stereo-specificity of chem. processes. They have been handled for instance in the rational design of coordination polymers and supramol. assemblies. Because an accurate treatment of these interactions greatly improves the quality of the theor. description of a chem. system, great efforts are lent on the development of new computational methods capable of providing a pertinent reprodn. of exptl. observations. In this communication we shall disclose our findings on the crucial role played by dispersion force. Thanks to DFT-D and other wave-function theory-based methods it can be demonstrated that dispersion is the key attractive force ensuring the structural cohesion of weakly bonded metal-metal adducts and complexes. [on SciFinder(R)]

  • Cours
  • Image
  • N°spécial de revue/special issue
  • Developments in ultrafast spectroscopy

    Chantal Daniel, Luis Bañares, Spiridoula Matsika, Jin Zhao
    Physical Chemistry Chemical Physics, 24 (20), pp.12082-12082, 2022, ⟨10.1039/D2CP90063G⟩ | Publiée le 1 janvier 2022
    N°spécial de revue/special issue

    Guest editors, Chantal Daniel, Luis Banares, Spiridoula Matsika and Jin Zhao, introduce this Physical Chemistry Chemical Physics themed issue.

  • GECat 2015

    Benoît Louis, Pascal Fongarland, Olivier Marie, Hugo Petitjean, Céline Chizallet, Didier Borremans, Rui Marques, Céline Fontaine, Thomas Onfroy, Jean-Sébastien Girardon
    Comptes Rendus. Chimie, 20 (1), pp.5 - 6, 2017, ⟨10.1016/j.crci.2016.09.008⟩ | Publiée le 1 janvier 2017
    N°spécial de revue/special issue

  • Ouvrages
  • Poster de conférence
  • Cartographie et compréhension des liens entre les industries d'énergies fossiles (IF) et l'enseignement supérieur et la recherche (EsR) français

    Laurent Husson, L. Jouniaux, Odin Marc, Maxime Precheur, Adrien Saphy, Sacha Muszlak, Nolwenn Lesparre, Aaron Pereira, Chiara Pistocchi, Julien Lefevre, Antonin Coutant, Katherine Alvino Saavedra, Olivier Cavalié
    Colloque Labos1.5 Empreinte environnementale et soutenabilité des activités de recherche, Nov 2024, Paris, France. , 2024 | Publiée le 5 novembre 2024
    Poster de conférence

    La science est claire: selon le 6e rapport du GIEC, au rythme des émissions de CO2 actuelles les budgets climats pour rester sous les seuils de 1.5°C et 2°C de réchauffement, seront dépassés dans moins de 10 et 25 ans respectivement. Selon le GIEC et l’Agence Internationale de l’Énergie “rester sur une trajectoire 1,5°C implique de stopper le développement de nouveaux projets pétroliers et gaziers dès 2022.” Pourtant la plupart des industries fossiles (IF), ici définies comme actives dans l’exploration ou l’exploitation d’énergies fossiles carbonées (charbon, gaz, pétrole) continuent à investir dans le développement de nouveaux sites d’extraction et rejettent ces résultats scientifiques sur la base d’arguments douteux voir fallacieux. En parallèle, les IF maintiennent des liens étroits avec l’Enseignement Supérieur et la Recherche (ESR), à travers des projets de recherche, des enseignements ou d’autres partenariats, leur permettant d’accéder à des travailleurs formés, d’orienter les sujets de recherches, d’obtenir des financements publics et peut-être avant tout, de maintenir, voir verdir, leur image en s’associant à l’image positive de l’ESR. Implication pour la recherche: Les universités et organismes de recherche publics sont fondés sur des valeurs incluant l’honnêteté intellectuelle, la droiture morale, l’intégrité éthique et la production de connaissance au service de problématiques sociales. Vu que les industries fossiles assument, de manière de plus en plus évidente (Bonneuil et al., 2021), leur malhonnêteté intellectuelle et leur volonté assumée de préserver leurs intérêts privés (quel que soit le coût du changement climatique pour la société), on pourrait penser que les collaborations entre l’ESR publique et les IF soient dénoncées et interrompues. Pourtant, même si quelques grandes universités dont Cambridge, Oxford, Harvard, ou l’Université Libre d’Amsterdam ont cessé certaines, voire toutes, formes de collaborations, ce type de décision reste rare et n’est pas encore advenu en France. Nous proposons d’enquêter sur les raisons de cette inaction et de cette passivité de l’ESR français vis-à-vis des IF et sur leurs implications en terme de lutte contre le dérèglement climatique. Plusieurs mécanismes peuvent être en jeu, dont au moins i) l’opacité sur les liens entre ESR et IF (qui empêche de les dénoncer), ii) la croyance que les IF et/ou leur projet sont une partie de la solution aux problèmes climatiques (qui pousse à les soutenir) et iii) les conditions de financement difficiles de l’ESR (qui fait craindre l’interruption des collaborations). Pour clarifier l’importance de ces mécanismes et leurs effets nous nous appuyons sur deux approches complémentaires. D’une part une cartographie des liens entre IF et ESR français, inspiré de l’initiative Hollandaise (Mapping Fossil Ties Coalition, 2024). Cette cartographie s’appuiera sur les bases de données des projets financés par l’Europe (plus de 500 projets des Programmes FP7 et Horizon incluaient au moins un établissement Français de l’ESR et une IF) ou par l’ANR ayant des IF pour partenaires, permettant de visualiser les sujets de recherches en jeu, les niveaux de financements allant aux IF et les principales universités partenaires. De plus, l’analyse de sites webs et de rapports d’activités permettront de décrire plus en détails les liens de certaines institutions fortement liées aux IF et leur justification (par ex via les UMR industrielles du CNRS). D’autre part nous analyserons et présenterons les résultats d’un questionnaire anonyme diffusé parmi les membres de l’ESR français visant à clarifier la position des agents vis -à -vis des liens entre IF et ESR, de leur justification et de leurs craintes associées à la rupture éventuelle de ces liens, clarifiant ainsi le rôle des trois mécanismes hypothétiques ci -dessus. Le questionnaire permettra aussi de compléter par une approche bottom-up la cartographie des liens entre IF et ESR.

  • Approches transversales autour des vases du site de la fin du Bronze moyen de Berstett Langenberg (Bas-Rhin)

    Matthieu Michler, Nadia Tarifa, P. Adam, P. Schaeffer
    Ustensiles et espaces culinaires de la Protohistoire au début du XXe siècle, Jun 2024, Dijon (Bourgogne), France | Publiée le 4 juin 2024
    Poster de conférence

    Découvert à l’occasion des dernières fouilles sur le tracé de l’actuel contournement ouest de Strasbourg, le gisement de Berstett Langenberg (Bas-Rhin, Féliu 2020) a livré en 2018 une vaste occupation du Bronze moyen (43 structures), cas assez rare en Alsace. Il se distingue par une quantité importante de céramiques (160 récipients) et par des dépôts de vases entiers dans le fond de certaines fosses. En parallèle à une analyse archéologique des contextes et d’une étude céramique « classique », une étude croisée, impliquant une série d’analyses biogéochimiques sur les parois internes d’une dizaine de vases a été réalisée. Il s’agissait d’identifier les contenus de ces vases et de comprendre l’emploi de certains récipients de formes différentes dans les pratiques culinaires particulières (consommation collective possible de boissons) ou plus courantes (Michler et al. à paraître). Cette présentation-poster constitue un retour d’expérience qui s’attachera à illustrer les multiples interrogations des chercheurs face à ce type de découverte et à confronter les diverses approches débouchant parfois sur des surprises et des remises en cause. Elle s’inscrit dans la démarche de plusieurs travaux récents sur des périodes proches (Néolithique, Protohistoire, par exemple Drieu et al. 2020) ou plus récentes (fin du premier âge du Fer, Stockhammer et Fries-Knoblach dir. 2019) portant sur la biographie des récipients céramique et de leur emploi lors de la préparation des mets ou leur consommation.

  • Catalytic Properties of Porphyrins Bearing Peripheral N-Heterocyclic Carbene Rhodium Complexes

    Ludivine Poyac, Stefano Scoditti, Xavier Dumail, Michel Granier, Sébastien Clément, Rafael Gramage-Doria, Charles Devillers, Sébastien Richeter
    International Conference on Porphyrins and Phthalocyanines 2022, Jul 2022, Madrid, Spain | Publiée le 10 juillet 2022
    Poster de conférence

    N-heterocyclic carbenes (NHCs) are both relevant ligands in the fields of coordination and organometallic chemistry. During the last decade, several molecular systems combining porphyrins and NHC ligands were reported in the literature. Merging metalloporphyrins and NHC-metal complexes within unimolecular systems may lead to multimetallic species with new catalytic properties such as cooperative effects between inner and outer metal cations. Here, we present the synthesis and characterization of some molecular systems combining porphyrins and NHC-rhodium(I) complexes (see below). The catalytic properties of these complexes were investigated for the conjugated addition of phenylboronic acid to cyclohexen-2-one. We notably show the effect of the inner metal cations on the catalytic properties of the outer rhodium(I) complexes according to the structure of the ligand and the distance between the two metal centres. The results of this structure-function relationship study show a modulation of the catalytic properties of NHC-Rh(I) complexes by the porphyrin.

  • Analyse et datation d’une ancre en fer découverte au large de La Grande-Motte (34)

    Berthaut-Clarac Sébastien, Emmanuel Nantet, Stéphanie Leroy, Emmanuelle Delque-Količ, Marion Perron, P. Adam, P. Schaeffer, Céline Kerfant
    XXIIIe colloque du GMPCA : Archéométrie 2022, May 2022, Chambéry, France | Publiée le 2 mai 2022
    Poster de conférence

    En 2016, deux ancres en fer ont été découvertes dans la baie d’Aigues-Mortes lors de prospections magnétiques*. Même si leur typologie laissait supposer une attribution antique, ces ancres, de par leurs dimensions exceptionnelles et en l’absence de tout contexte archéologique, méritaient d’être étudiées plus avant. L’anneau d’une des ancres a pu être découpé et a fait l’objet de deux datations radiocarbone. Des observations métallographiques et des analyses chimiques inclusionnaires de l’alliage ferreux ont été menées au préalable afin d’évaluer la teneur en carbone du métal, son hétérogénéité et les possibilités de contaminations. Ces analyses ont également permis d’avancer quelques hypothèses quant à la fabrication de l’objet lui-même. Par ailleurs, l’étude botanique et chimique des résidus fibreux découverts sous l’épaisse couche de concrétions a mis en évidence les restes d’une emboudinure et apporté quelques éléments d’informations quant à sa nature. Les résultats d’analyses et les datations radiocarbone réalisées sur le fer et les restes d’emboudinure seront présentés et commentés au regard des connaissances disponibles pour ces éléments de navigation en méditerranée dans l’Antiquité. *Les prospections et sondages ayant abouti à la découverte des ancres ont été réalisés par le Groupe de Recherche en Archéologie Navale sous la direction de Max Guérout et de Sébastien Berthaut-Clarac.

  • Radical intermediates and monoalkoxyphenols: anti-and prooxidant activities

    Yannick Port-Lougarre, Bertrand Vileno, Elena Gimenez-Arnau
    Journées Scientifiques de l’ARPE (Association Française de Résonance Paramagnétique Électronique), Mar 2022, Paris, France | Publiée le 17 mars 2022
    Poster de conférence

    BACKGROUND OBJECTIVES Get insights on the involvement of free radical intermediates issued from monoalkoxyphenol derivatives to elucidate the duality between their antioxidant-cytoprotective and their prooxidant-cytotoxic activities in the skin SPIN-TRAPPING IN SOLUTION Focus on eugenol & isoeugenol: comparing with in situ radicals formed in reconstructed human epidermis (RHE)

  • Acyclic Polyisoprenoid Hydrocarbons: Fundamental Regulators of the Archaeal Membrane?

    Maxime Tourte, Philippe Schaeffer, Vincent Grossi, Philippe Oger
    30th International Meeting on Organic Geochemistry (IMOG), Sep 2021, Montpellier, France. 30th International Meeting on Organic Geochemistry (IMOG 2021), 2021, pp.1-2, 2021, ⟨10.3997/2214-4609.202134200⟩ | Publiée le 12 septembre 2021
    Poster de conférence

    Sterols and hopanoids, the typical membrane regulators of Eukaryotes and Bacteria, are absent from Archaea, which might instead use acyclic polyisoprenoid hydrocarbons (APH). Although a few studies evidenced that APH do modulate membrane physicochemical properties as other membrane regulators, little is known about these intriguing compounds in the third domain of life. In an effort to elucidate APH distribution, physiological and adaptive functions, and biosynthetic pathway in Archaea, we collected all the literature data available and evaluated the APH composition of 65 archaeal species homogeneously distributed within the phylogenetic tree and ecological niches of Archaea. Fully saturated to fully unsaturated 30, 35, and 40-carbon long APH were detected in most species investigated, regardless of their phylogenetic position, lipid composition, or preferential environmental conditions, although the chain length could be correlated with growth conditions. Despite such a wide occurrence of APH in Archaea, only rare homologues of the eukaryotic and bacterial APH biosynthetic pathways were found. How they synthesize these compounds thus remains elusive and lipid analysis still prevails as the only mean to assess the production and functions of these essential archaeal membrane components.

  • Poster Functionalized membrane domains: an ancestral feature of Archaea

    Maxime Tourte, Marta Salvador-Castell, P. Schaeffer, Vincent Grossi, Philippe Oger
    Bilayers at the ILL, Dec 2019, Grenoble, France | Publiée le 11 décembre 2019
    Poster de conférence

    The current tree of life is divided into three domains: Bacteria, Eukarya and Archaea. While bacterial and eukaryotic lipids are constituted of sn-3 glycerol on which straight fatty acids are ester-bound, archaeal lipids contain ramified isoprenoid hydrocarbons that are linked through ether bounds on a sn-1 glycerol. As a results, plasma membranes are spatially organized into domains of distinct functions in Bacteria and Eukarya, but membrane functionalization remains a debated question in Archaea. However, the recent reinvestigation of the lipid content of the hyperthermophilic and piezophilic archaeon Thermococcus barophilus led to the elaboration of a novel membrane ultrastructure in which monolayered and apolar hydrocarbon-containing bilayered domains may be delineated [1]. To estimate the ubiquity of this novel membrane ultrastructure in and out of the order Thermococcales and all the organizational possibilities it implies, we reassessed the lipid composition of all the Thermococcales type species and all archaea. We show that almost all archaea can synthesize di-and tetraether lipids, which reflect their lifestyle more than their phylogeny and support the universal existence of a functionalized membrane in Archaea. Our findings establish functionalized membrane domains as a universal feature of Archaea, and thus of all living organisms, opening new avenues to understand the membrane physiology and adaptation since the origin of cellular life.

  • Formation of free radicals from the skin sensitizer ascaridole in a 3D epidermis model and activation of the innate immune response. IUTOX (International Union of Toxicology) 15th International Congress of Toxicology. Honolulu, Hawaii, États-Unis (15-18 juillet 2019).

    Fatma Sahli, Bertrand Vileno, Marta Silva E Sousa, Jutta Lichter, Brunhilde Blomeke, Elena Gimenez Arnau
    15th International Congress of Toxicology, Jul 2019, Honolulu, Hawaii, États-Unis, France. 2019 | Publiée le 15 juillet 2019
    Poster de conférence

  • Allergenic oxidized fragrances in consumer goods: understanding the sensitizing potential and related oxidative stress in an epidermal skin environment. IUTOX (International Union of Toxicology) 15th International Congress of Toxicology. Honolulu, Hawaii, États-Unis (15-18 juillet 2019).

    Fatma Sahli, Marta Silva E Sousa, Bertrand Vileno, Jutta Lichter, Brunhilde Blomeke, Elena Giménez-Arnau
    15th International Congress of Toxicology, Jul 2019, Honolulu, United States. 2019 | Publiée le 1 juillet 2019
    Poster de conférence

  • Formation of radicals from endoperoxide ascaridole in a 3D epidermis model and activation of the innate immune response. 77th Annual Meeting of the Society of Investigative Dermatology, Chicago, États-Unis

    Fatma Sahli, Bertrand Vileno, Marta Silva E Sousa, Jutta Lichter, Brunhilde Bloemeke, Elena Giménez-Arnau
    77th Annual Meeting of the Society of Investigative Dermatology, Chicago, États-Unis, May 2019, Chicago, United States. 139 (5S), pp.S170, 2019, Journal of Investigative Dermatology | Publiée le 1 mai 2019
    Poster de conférence

  • Understanding the skin sensitization capacity of oxidized fragrances: study in an epidermal skin environment. 77th Annual Meeting of the Society of Investigative Dermatology, Chicago, États-Unis

    Fatma Sahli, Marta Silva E Sousa, Bertrand Vileno, Jutta Lichter, Brunhilde Bloemeke, Elena Giménez-Arnau
    77th Annual Meeting of the Society of Investigative Dermatology, Chicago, États-Unis, May 2019, Chicago, United States. 139 (5S), pp.S170, 2019, Journal of Investigative Dermatology | Publiée le 1 mai 2019
    Poster de conférence

  • In situ mapping of the reactivity of chemical sensitizers in reconstructed human epidermis using high-resolution magic angle spinning (HRMAS) NMR technique. SOT 58th Annual Meeting (Society of Toxicology), Baltimore, États-Unis

    Hassanl Srour, Francois-Marie Moussallieh, Karim El Bayed, Elena Giménez-Arnau, Martina Klaric, Jean-Pierre Lepoittevin
    SOT 58th Annual Meeting (Society of Toxicology), Baltimore, États-Unis, Mar 2019, Baltimore, United States. 2019 | Publiée le 1 mars 2019
    Poster de conférence

  • Formation of radicals from endoperoxide ascaridole in a 3D epidermis model: an EPR spin-trapping study. Workshop 2018 : RPE et chimie organique : A la recherche de radicaux libres élusifs. Chimie ParisTech, Paris, France

    Fatma Sahli, Bertrand Vileno, Philippe Turek, Jean-Pierre Lepoittevin, Elena Giménez-Arnau
    Workshop 2018 : RPE et chimie organique : A la recherche de radicaux libres élusifs. Chimie ParisTech, Paris, France, Jun 2018, Paris, France. 2018 | Publiée le 1 juin 2018
    Poster de conférence

  • Activation of the innate immune response in an epidermal skin environment - Impact of proliferating and differentiated keratinocytes on dendritic cell activation by contact allergens. SOT 57th Annual Meeting (Society of Toxicology), San Antonio, Texas, États-Unis

    Marta Sousa, Jutta Lichter, Jennifer Hennen, Fatma Sahli, Elena Giménez-Arnau, Brunhilde Bloemeke
    SOT 57th Annual Meeting (Society of Toxicology), San Antonio, Texas, États-Unis, Mar 2018, San-Antonio, United States. 2018 | Publiée le 1 mars 2018
    Poster de conférence

  • Facing the challenge: developing and validating approaches for the detection and quantification of skin-sensitizing hydroperoxides in consumer products. 13th Congress of the European Society of Contact Dermatitis, Manchester, Royaume-Uni

    Andreas Natsch, Michael Calandra, Hans Leijs, J Masson, Elise Corbi, Ann-Therese Karlberg, Elena Giménez-Arnau, Jean-Marie Aunbry, Ulrika Nilsson, Matthias Vey, Cecile Gonzalez
    13th Congress of the European Society of Contact Dermatitis, Manchester, Royaume-Uni, Sep 2016, Manchester, United Kingdom. 2016 | Publiée le 1 septembre 2016
    Poster de conférence

    In Gabon, the forest covers about 85% of the territory, which is the second forest potential in Africa. For the economic development of Gabon, the government has decided to ban the export of logs since January 2010 paving the way for local processing and the extension of tropical species in local and regional constructions. However, because of the operating costs associated with primary processing and drying, the debited solid wood used in particular under construction is still very expensive to date. An alternative would be to insert lesser quality species in Reconstituted Solid Wood Beams (RSW) currently used in construction. This will allow to minimise the losses due to sawing, to maximise the mechanical resistance of the structural elements obtained and to control, therefore, the costs of the timber construction considered still high with regard to the immense forest resources available to the country. Major interests referred through the development of RSW are due to the good dimensional stability (drying mandatory for mastery of collage), the absence of significant cracking, machining facilitated by the industrialisation of robotics, and the lack of apparent joints. In fact, RSW are mainly used in temperate countries in the construction of large structures. However, the study of the behaviour of tropical timber in their immediate environment is a real challenge for the prediction of structural responses of these kind of structures. The current study is performed Within the company Ecowood in Libreville, Gabon, in order to investigate the mechanical characteristics of RSW beams made up of Staustia Kamernesis (Niové), of Dacryodes Buettneri (Ozigo) and Pterocarpus Osun (Padouk) for different moisture content. The adhesive used is phenol, suitable for tropical environments. Three-point bending tests were initially carried out on the RSW beams DUO and TRIO without defects. The results show that the fracture toughness of the beams is related to the position of the single lamellae. The most resistant are those where the lesser quality lamellae are in less-solicited areas, this is the TRIO combination Niové/Ozigo/Niové. On the other Part, in order to simulate structural wood defects, these tests were carried out again on beams with initial cracks located at different locations to determine the fracture parameters such critical energy release rate.

  • Radical mechanisms in the first step of skin allergy processes. Ecole de l’Association Française de Résonance Paramagnétique Electronique, “Les bases fondamentales de la RPE”, Obernai, France

    Salen Kuresepi, Bertrand Vileno, Jean-Pierre Lepoittevin, Philippe Turek, Elena Giménez-Arnau
    Ecole de l’Association Française de Résonance Paramagnétique Electronique, “Les bases fondamentales de la RPE”, Obernai, France, Jun 2016, Obernai, France. 2016 | Publiée le 1 juin 2016
    Poster de conférence

  • Pré-publication, Document de travail
  • Dissecting Reaction Paths with the Independent Gradient Model: The Case of a Key Reductive Elimination Step at Cobalt(IV)

    Sara Figueirêdo de Alcântara Morais,, Lucas Loir-Mongazon, Cornaton Yann, Eric Hénon, Jean-Pierre Djukic
    2025 | Publiée le 20 novembre 2025
    Pré-publication, Document de travail

    The Independent Gradient Model (IGM) reveals interaction signatures through the analysis of the electron density gradient. In this report it is used to analyze the variations of the electronic structure of a molecular system undergoing, along a series of highly sampled Intrinsic Reaction Coordinates (IRC), a concerted reductive elimination reaction staging a doublet ground state metallacyclic [Cp*{C,N}Co<sup>(IV)</sup>-X{Y}]<sup>+</sup> ( –X{Y}= 1 electron ligand, {Y}= assisting atom) reactant complex (RC).

  • Polarization dependence of spin-electric transitions in molecular exchange qubits

    Filippo Troiani, Athanassios K. Boudalis
    2025 | Publiée le 19 novembre 2025
    Pré-publication, Document de travail

    Quasi-optical experiments are emerging as a powerful technique to probe magnetic transitions in molecular spin systems. However, the simultaneous presence of the electric- and magnetic-dipole induced transitions poses the challenge of discriminating between these two contributions. Besides, the identification of the spin-electric transitions can hardly rely on the peak intensity, because of the current uncertainties on the value of the spin-electric coupling in most molecular compounds. Here, we compute the polarizations required for electric- and magnetic-dipole induced transitions through spin-Hamiltonian models of molecular spin triangles. We show that the polarization allows a clear discrimination between the two kinds of transitions. In addition, it allows one to identify the physical origin of the zero-field splitting in the ground multiplet, a debated issue with significant implications on the coherence properties of the spin qubit implemented in molecular spin triangles.

  • Jasmonic Acid Oxidases (JAO) define a new branch in jasmonate metabolism towards 11OH-jasmonic acid and its glucosylated derivative

    Thierry Heitz, Valentin Marquis, Julie Zumsteg, Dina Dannawi, Dorian Schutz, Laurence Miesch
    2025 | Publiée le 13 novembre 2025
    Pré-publication, Document de travail

    Abstract Jasmonates (JAs) occur in plants as a group of related compounds undergoing complex metabolic conversions that shape signatures unique to a given organ or physiological status. Previous studies have shown that several JAs result from direct or indirect catabolism of the master hormonal regulator jasmonoyl-isoleucine (JA-Ile) that controls most jasmonate responses triggered by developmental or environmental cues. Hydroxylation of the precursor jasmonic acid (JA) by Jasmonic Acid Oxidases (JAO) holds a peculiar regulatory function, by attenuating basal JA-Ile formation and action, and promoting growth. Here we reinvestigated biochemically and genetically the nature and origins of hydroxy-JAs and their derivatives in Arabidopsis. Using refined analytical methods and pathway-impaired mutants, we show that JAO enzymes produce exclusively 11OH-JA and are preferentially recruited in response to fungal infection where 11- O -Glc-JA accumulates as its main glucosylated derivative. In contrast, mechanical wounding triggers the dominant formation of 12-OH-JA (and its derivatives 12- O -Glc-JA and 12-HSO 4 -JA) as a cleavage product of the JA-Ile catabolite 12OH-JA-Ile by the amido hydrolases IAR3 and ILL6. Our results identify the elusive 11OH-JA biosynthetic pathway and provide a revisited picture of JA metabolism where two separate enzyme systems lead to stress-modulated formation of hydroxy-JAs position isomers to attenuate signaling.

  • A State-Specific Iterative Decoupling Scheme Based on Perturbation Theory for Low-Energy Electronic States

    Oussama Bindech, Saad Yalouz, Vincent Robert
    2025 | Publiée le 10 novembre 2025
    Pré-publication, Document de travail

    In this work, we introduce a selective and scalable extension of the multi-step Rayleigh-Schrödinger and Brillouin-Wigner (RSBW) perturbative scheme (see Ref. [1]) , designed to efficiently access the low-energy spectrum of molecular systems. The method proceeds by combining successive effective Hamiltonian diagonalizations inspired by second-order Rayleigh-Schrödinger perturbation theory, with a Brillouin-Wigner correction applied to individually optimized states using an updated partitioning of the Hamiltonian. At each step, a zeroth-order state is identified and progressively decoupled from the remaining higher-lying states, thereby enabling a well-conditioned Brillouin-Wigner expansion for the energy correction. In contrast to previous approaches, the method selectively targets a small number of low-lying states, significantly reducing the numerical overhead while maintaining spectroscopic accuracy. The robustness of the method is demonstrated on the LiH and H 4 molecules, where accurate excitation energies are obtained for the lowest singlet states using compact model spaces, confirming its potential for realistic applications.

  • Synthesis of 2-C-cyclopropyl-D-erythritol-2,4-cyclopyrophosphate, a radical clock to study the enzymatic mechanism of IspG

    Vivien Herrscher, Fabien Massicot, Jean-Luc Vasse, Myriam Seemann, Jean-Bernard Behr
    2025 | Publiée le 8 octobre 2025
    Pré-publication, Document de travail

    We report the synthesis of a cyclopropyl analogue of methyl-D-erytritol cyclopyrophosphate (MEcPP), designed as a fraudulent substrate likely to undergo the enzymatic process. This compound appears as an invaluable chemical tool to decipher the mechanism of IspG through analysis of metabolites deriving from the corresponding methylcyclopropyl cation or radical intermediate.

  • Defect-Mediated Pairing and Dissociation of Strongly Correlated Electrons in Low Dimensional Lattices: The Quantum Taxi Effect

    Vincent Pouthier, Saad Yalouz
    2025 | Publiée le 1 juin 2025
    Pré-publication, Document de travail

    We study the quantum dynamics of a strongly correlated electron pair in a one-dimensional lattice, focusing on the occurrence of local dissociation/pairing mechanisms induced by a site energy defect. To this end, we simulate the time evolution of two interacting electrons on a finite-size chain governed by an extended Hubbard Hamiltonian including on-site Coulomb repulsion U and nearest-neighbor interaction V , along with single-electron hopping J. By introducing a local site energy defect with amplitude ∆, we show that a transition between spatially paired/dissociated electrons can occur in the vicinity of this site. Such mechanisms arise in a strongly correlated regime with non-zero nearest neighbor Coulomb interactions and under the conditions (U ∼ V ∼ ∆) ≫ J. To rationalize these phenomena, we reformulate the two-electron dynamics of the original Hubbard chain as an effective single-particle problem on a two-dimensional network. Within this framework, we show that the pairing/dissociation dynamics are driven by resonances between two distinct families of two-electron eigenstates: (i) states with two spatially well-separated electrons with one located at the site defect, and (ii) states with locally bound electron located away from the defect. At resonance, these states hybridize, allowing transitions from locally paired to dissociated electrons (and vice versa) in the vicinity of the defect. These results provide new insights into exotic pairing phenomena in strongly correlated electronic systems and may have implications for the design of tunable many-body states in low-dimensional quantum materials.

  • Next-generation Cu(II) selective peptide shuttles prevent Cu(Aβ)-induced toxicity and microglial activation in organotypic hippocampal slices

    Michael Okafor, David Schmitt, Stéphane Gasman, Laurent Raibaut, Christelle Hureau, Peter Faller, Nicolas Vitale
    2025 | Publiée le 21 mars 2025
    Pré-publication, Document de travail

    Alzheimer’s disease (AD) remains the most prevalent neurodegenerative disease with hallmarks including the apparition, in specific areas of the brain, of intracellular neurofibrillary tangles and extracellular amyloid plaques. The latter result from an abnormal metabolism of Amyloid-β precursor protein (APP) leading to its accumulation in plaques. Ex vivo analysis of AD patients’ brains, show an abnormally elevated concentration of metals including Cu, Zn and Fe in these plaques. Some studies have also demonstrated altered Cu levels in the entire brain and more specifically in regions heavily affected in AD. These modifications are often accompanied by a decline in neuronal Cu levels and by an increase in the proportion of extracellular labile Cu, which in turn promotes reactive oxygen species formation. To correct this Cu dyshomeostasis, we designed and synthesized novel Cu(II)-selective peptide shuttles, capable of swiftly retrieving Cu from extracellular Aβ and subsequently transporting and releasing Cu inside cells. We demonstrate here the capacity of this new Cu-shuttles, DapHH-αR5W4NBD and HDapH-αR5W4NBD, to protect organotypic hippocampal slices (OHSCs) from Cu(Aβ)-induced insult and their capability to rescues Cu-induced microglial activation and proliferation.

  • Études moléculaires des ambres archéologiques d'Alsace : problématique et intérêt pour l'identification de leurs origines géographiques

    Alice Fradet, Swann Schmitt, P. Adam, P. Schaeffer, Matthieu Michler, Clément Féliu, Delphine Minni, Éric Boës, Dimitri Mathiot, Emilie Demongin
    2024 | Publiée le 18 novembre 2024
    Pré-publication, Document de travail

    <div><p>Découverts ponctuellement dans des sépultures protohistoriques ou plus récentes, les artefacts en ambre, souvent de la parure, permettent d'étudier le savoir-faire des populations anciennes tout comme la circulation de matières premières à longue distance. Les diverses méthodes d'étude de compositions (spectrales ou par pyrolyse) ont souvent identifié une origine baltique des ambres qu'il fallait vérifier sur de nouveaux objets issus de fouilles en Alsace. Une méthode différente élaborée par le laboratoire de Biogéochimie Moléculaire de Strasbourg, s'appuyant sur l'analyse par chromatographie gazeuse couplée à la spectrométrie de masse, permet d'identifier la distribution des biomarqueurs lipidiques des résines anciennes à partir de très petits prélèvements effectués sur la surface des objets, ce qui fournit des indications quant à l'origine et le degré d'altération de l'ambre. Dans cette perspective, quinze objets en ambre, principalement des perles en provenance de sépultures du Bronze moyen de la forêt de Haguenau (NE de la France), ont fait l'objet de prélèvements non invasifs révélant une origine baltique ainsi qu'une altération très limitée. Ces résultats très encourageants nous poussent à poursuivre les investigations à la fois sur des artefacts et des blocs bruts de matière première.</p></div>

  • Observation of spin-electric transitions in a molecular exchange qubit

    Florian Le Mardelé, Ivan Mohelský, Jan Wyzula, Milan Orlita, Philippe Turek, Filippo Troiani, Athanassios K. Boudalis
    2024 | Publiée le 12 novembre 2024
    Pré-publication, Document de travail

    Electric fields represent an ideal means for controlling spins at the nanoscale and, more specifically, for manipulating protected degrees of freedom in multispin systems. Here we perform low-temperature magnetic far-IR spectroscopy on a molecular spin triangle (Fe3) and provide the first experimental evidence of spin-electric transitions in polynuclear complexes. The co-presence of electric- and magnetic-dipole transitions, allows us to estimate the spin-electric coupling. Based on spin Hamiltonian simulations of the spectra, we identify the observed transitions and introduce the concept of a generalized exchange qubit. This applies to a wide class of molecular spin triangles, and includes the scalar chirality and the partial spin sum qubits as special cases.

  • Encoding information onto the charge and spin state of a paramagnetic atom using MgO tunnelling spintronics

    Mathieu Lamblin, Bhavishya Chowrira, Victor da Costa, Bertrand Vileno, Loic Joly, Samy Boukari, Wolfgang Weber, Romain Bernard, Benoit Gobaut, Michel Hehn, Daniel Lacour, Martin Bowen
    2023 | Publiée le 8 novembre 2023
    Pré-publication, Document de travail

    An electrical current that flows across individual atoms or molecules can generate exotic quantum-based behavior, from memristive effects to Coulomb blockade and the promotion of quantum excited states. These fundamental effects typically appear one at a time in model junctions built using atomic tip or lateral techniques. So far, however, a viable industrial pathway for such discrete state devices has been lacking. Here, we demonstrate that a commercialized device platform can serve as this industrial pathway for quantum technologies. We have studied magnetic tunnel junctions with a MgO barrier containing C atoms. The paramagnetic localized electrons due to individual C atoms generate parallel nanotransport paths across the micronic device as deduced from magnetotransport experiments. Coulomb blockade effects linked to tunnelling magnetoresistance peaks can be electrically controlled, leading to a persistent memory effect. Our results position MgO tunneling spintronics as a promising platform to industrially implement quantum technologies.

  • Optimized excitonic transport mediated by local energy defects: survival of optimization laws in the presence of dephasing

    Lucie Pepe, Vincent Pouthier, Saad Yalouz
    2023 | Publiée le 1 août 2023
    Pré-publication, Document de travail

    In an extended star with peripheral defects and a core occupied by a trap, it has been shown that exciton-mediated energy transport from the periphery to the core can be optimized [S. Yalouz et al. Phys. Rev. E 106, 064313 (2022)]. If the defects are judiciously chosen, the exciton dynamics is isomorphic to that of an asymmetric chain and a speedup of the excitonic propagation is observed. Here, we extend this previous work by considering that the exciton in both an extended star and an asymmetric chain, is perturbed by the presence of a dephasing environment. Simulating the dynamics using a Lindblad master equation, two questions are addressed: how does the environment affect the energy transport on these two networks? And, do the two systems still behave equivalently in the presence of dephasing? Our results reveal that the timescale for the exciton dynamics strongly depends on the nature of the network. But quite surprisingly, the two networks behave similarly regarding the survival of their optimization law. In both cases, the energy transport can be improved using the same original optimal tuning of energy defects as long as the dephasing remains weak. However, for moderate/strong dephasing, the optimization law is lost due to quantum Zeno effect.

  • Novel non-canonical strigolactone analogs highlight selectivity for stimulating germination in two Phelipanche ramosa populations

    Suzanne Daignan Fornier, Alexandre de Saint Germain, Pascal Retailleau, Jean-Paul Pillot, Quentin Taulera, Lucile Andna, Laurence Miesch, Soizic Rochange, Jean-Bernard Pouvreau, François-Didier Boyer
    2022 | Publiée le 23 mars 2022
    Pré-publication, Document de travail

    Strigolactones (SLs) are plant hormones exuded in the rhizosphere with a signaling role for the development of arbuscular mycorrhizal (AM) fungi and as stimulants of seed germination of the parasitic weeds Orobanche, Phelipanche and Striga, the most threatening weeds of major crops worldwide. Phelipanche ramosa is present mainly on rape, hemp and tobacco. P. ramosa 2a preferentially attacks hemp while P. ramosa 1 attacks rapeseed. The recently isolated Cannalactone 14 from hemp root exudates has been characterized as a non-canonical SL that selectively stimulates the germination of P. ramosa 2a seeds in comparison with P. ramosa 1. In the present work, we established that (−)-solanacol 5, a canonical orobanchol-type SL exuded by tobacco and tomato, possesses a remarkable selective germination stimulant activity for P. ramosa 2a seeds. We synthesized cannalactone analogs, named (±)-SdL19 and (±)-SdL118 which have an unsaturated acyclic carbon chain with a tertiary hydroxyl group and a methyl or a cyclopropyl group instead of a cyclohexane A-ring, respectively. (±)-SdL analogs are able to selectively stimulate P. ramosa 2a revealing that these minimal structural elements are key for this selective bioactivity. In addition, we showed that (±)-SdL19 is able to inhibit shoot branching in Pisum sativum and Arabidopsis thaliana, and induces hyphal branching in AM fungus R. irregularis, like SLs.

  • Record spintronic harvesting of thermal fluctuations using paramagnetic molecular centers

    B Chowrira, L Kandpal, D Mertz, C Kieber, A Bahouka, R Bernard, L Joly, E Monteblanco, S Mohapatra, E Sternitzky, V da Costa, M Hehn, F Montaigne, B Vileno, F Choueikani, P Ohresser, D Lacour, W Weber, S Boukari, M Bowen
    2020 | Publiée le 12 novembre 2020
    Pré-publication, Document de travail

    Experiments and theory are reexamining how the laws of thermodynamics are expressed in a quantum world. Most quantum thermodynamics research is performed at sub-Kelvin temperatures to prevent thermal fluctuations from smearing the quantum engine's discrete energy levels that mediate the asymmetric shuffling of electrons between the electrodes. Meanwhile, several groups report that building an electron-spin based implementation by placing the discrete spin states of paramagnetic centers between ferromagnetic electrodes can not only overcome this drawback, but also induce a net electrical power output despite an apparent thermal equilibrium. We illustrate this thermodynamics conundrum through measurements on several devices of large output power, which endures beyond room temperature. We've inserted the Co paramagnetic center in Co phthalocyanine molecules between electron spin-selecting Fe/C60 interfaces within vertical molecular nanojunctions. We observe output power as high as 450nW(24nW) at 40K(360K), which leapfrogs previous results, as well as classical spintronic energy harvesting strategies involving a thermal gradient. Our data links magnetic correlations between the fluctuating paramagnetic centers and output power. This device class also behaves as a spintronically controlled switch of current flow, and of its direction. We discuss the conceptual challenges raised by these measurements. Better understanding the phenomenon and further developing this technology could help accelerate the transition to clean energy. Abstract (150 words) Several experiments have suggested that building a quantum engine using the electron spin enables the harvesting of thermal fluctuations on paramagnetic centers even though the device is at thermal equilibrium. We illustrate this thermodynamics conundrum through measurements on several devices of large output power, which endures beyond room temperature. We've inserted the Co paramagnetic center in Co phthalocyanine molecules between electron spin-selecting Fe/C60 interfaces within vertical molecular nanojunctions. We observe output power as high as 450nW(24nW) at 40K(360K), which leapfrogs previous results, as well as classical spintronic energy harvesting strategies involving a thermal gradient. Our data links magnetic correlations between the fluctuating paramagnetic centers and output power. This device class also behaves as a spintronically controlled switch of current flow, and of its direction. We discuss the

  • SiC-YiG X band quantum sensor for sensitive surface paramagnetic resonance applied to chemistry, biology, physics.

    Jérôme Tribollet
    2019 | Publiée le 1 janvier 2019
    Pré-publication, Document de travail

    Here I present the SiC-YiG Quantum Sensor, allowing electron paramagnetic resonance (EPR) studies of monolayer or few nanometers thick chemical, biological or physical samples located on the sensor surface. It contains two parts, a 4H-SiC substrate with many paramagnetic silicon vacancies (V2) located below its surface, and YIG ferrimagnetic nanostripes. Spins sensing properties are based on optically detected double electron-electron spin resonance under the strong magnetic field gradient of nanostripes. Here I describe fabrication, magnetic, optical and spins sensing properties of this sensor. I show that the target spins sensitivity is at least five orders of magnitude larger than the one of standard X band EPR spectrometer, for which it constitutes, combined with a fiber bundle, a powerful upgrade for sensitive surface EPR. This sensor can determine the target spins planes EPR spectrum, their positions with a nanoscale precision of +/- 1 nm, and their 2D concentration down to 1/(20nm)2.

  • Rapport
  • Centre Val-de Loire, Indre-et-Loire, Amboise, 3 rue Rouget de Lisle. Amboise, oppidum des Châtelliers : du sanctuaire gaulois au sanctuaire antique (100 av. – 70 ap. J.-C.). Rapport de fouille archéologique.

    Agnès Couderc, Jean Marie Laruaz, Julien Boislève, Séverine Braguier, Laureline Cinçon, Francesca Di Napoli, Mélanie Fondrillon, Benjamin Jagou, Laurent Lang, Gaëlle Le Berre, Yann Lozahic, Dorothée Lusson, Bénédicte Pradat, Boris Robin, Murielle Troubady, Pascal Verdin, Carole Vissac, P. Adam, Fayçal Ben Nejma, Marion Berranger, Hugo Blin, Véronique Chollet, Nicolas Holzem, Guillaume Hulin, M. Quilléroux-Moreau, Charlotte Rérolle, Cyprien de Salve Villedieu, P. Schaeffer
    Inrap - Centre Île-de-France; SADIL/CD37. 2025, 2 vol. (521 p. ; 995 p.) | Publiée le 1 janvier 2025
    Rapport

  • PCR AMBACIA, autorisation triennale 2024-2026, 1ere année. Rapport de Projet Collectif de Recherche

    Jean-Marie Laruaz, Astrid Baudoin, Séverine Braguier, Laureline Cinçon, Francesca Di Napoli, Audrey Drieux, Jessie Duval, Hélène Froquet-Uzel, Matthieu Gaultier, Bastien Gouhier, Etienne Jaffrot, Céline Landreau, Harold Lethrosne, Dorothée Lusson, Guillaume Métayer, Pauline Nuviala, Amandine Réaud, Cyprien de Salve Villedieu, Florian Sarreste, David Schmit, Grégory Silberstein, Amandine Tremel, Murielle Troubady, P. Adam, Marie-Camille Arqué, Sylvain Bauvais, Marion Berranger, Samuel Bédécarrats, Cyrille Ben Kaddour, Maryse Blet-Lemarquand, Thomas Boucher, Marion Bouchet, Stoil Chapkanski, Elsa Ciesielski, Agnès Couderc, Fabrice Couvin, Colin Duval, Benjamin Jagou, Laure-Anne Millet-Richard, Damase Mouralis, Julie Mousset, Sylvia Nieto-Pelletier, Aurore Noël, P. Schaeffer, Lola Trin-Lacombe, Boris Robin, Joëlle Rolland
    Conseil départemental d'Indre-et-Loire; Inrap; Eveha. 2025 | Publiée le 1 janvier 2025
    Rapport

  • Eckwersheim, Bas-Rhin, Burgweg Rechts, LGV Est Européenne 2e phase - zone de stockage, Grand Est ; habitat de bronziers du Néolithique récent et nécropoles de l’âge du Bronze, du Hallstatt final et du début de l’époque romaine

    Clément Féliu, Gersende Alix, Blandine Courel, Frédérique Durand, Ertlen Damien, Christophe Grazi, Anne Gebhardt, Florent Jodry, Annamaria Latron, Philippe Lefranc, Matthieu Michler, Hélène Réveillas, Nathalie Schneider, Willy Tegel, Yohann Thomas, Cécile Véber, Marie-Agnès Widehen
    Inrap GE. 2023 | Publiée le 1 janvier 2023
    Rapport

    La fouille d’Eckwersheim / Burgwegrechts a permis d’étudier, sur une surface d’un peu plus de 4,5 ha, plusieurs occupations successives, dont les datations s’échelonnent du Néolithique récent à l’époque romaine, ainsi que quelques structures agricoles modernes et contemporaines. Pour le Néolithique récent, une vingtaine de structures, pour l’essentiel des silos, sont regroupées dans la partie occidentale de la fouille. Elles correspondent à un petit habitat du Munzingen récent. Quelques tessons de creuset et un petit fragment de lingot de cuivre indiquent la production d’objets métalliques sur le site qui accueille ainsi les premières traces de métallurgie, et non pas seulement des objets en cuivre, dans la vallée du Rhin supérieur. L’occupation de l’âge du Bronze correspond à l’extension méridionale de la nécropole de la forêt de Brumath. Une demie douzaine de structures ont livré du mobilier du Bronze moyen (Bz B-C), parmi lesquelles deux correspondent à des dépôts de crémation. La nécropole prend une importance beaucoup plus grande à la transition du Bronze moyen et du Bronze final (Bz D – Ha A2) : 65 dépôts funéraires sont décomptés pour cette période. L’étude du mobilier céramique a permis de proposer une distinction entre les parties anciennes et récentes du Bronze D. Au Hallstatt C2-D1, deux grands tumuli sont installés à l’emplacement des principales concentrations de tombes de l’âge du Bronze. Conservés sur 30 à 60 m de diamètre et de 40 cm à 1 m de hauteur, ils accueillaient, autour de tombes centrales importantes, une ou plusieurs couronnes de sépultures adventices, installées dans la masse des tertres pendant le Ha D1-D2. Deux autres monuments, plus petits, ont également été reconnus. La sépulture principale du tumulus no 1, quoique très arasée et mal conservée, a livré les vestiges d’une chambre funéraire dans le coin de laquelle avait été déposée une petite situle en bronze de type Kurd, amenant à une trentaine le nombre de ces objets connus en Europe. Quelques structures domestiques gauloises trahissent ensuite l’existence d’une occupation, dont il n’est pas possible de dire grand-chose, sinon qu’elle se développait en dehors de l’emprise de la fouille, vers le nord. Enfin, à la transition entre la fin du Ier siècle avant J.- C. et le début du Ier siècle après J.-C., on assiste à la mise en place d’une nécropole rurale. Les premières structures, six dépôts de crémation, sont regroupées dans la partie nord du site. Entre 40 et 70 après J.- C., au moins six vastes enclos sont aménagés dans la moitié sud de la zone fouillée ; ils accueillent chacun une ou deux sépultures à incinération. Leurs dimensions et la nature de certains objets déposés dans les tombes permettent de s’interroger sur les phénomènes de romanisation à l’œuvre dans la vallée du Rhin supérieur au premier siècle. Dans le courant du IIe siècle, la nécropole semble péricliter, et seul le secteur septentrional est encore utilisé. Il accueille alors un petit groupe de tombes, installées dans la masse du plus important des tumuli du Hallstatt. Les derniers vestiges mis au jour sur le site sont des structures agricoles modernes et contemporaines. La plupart sont des silos à betteraves, installés le long d’un chemin agricole aujourd’hui disparu mais bien visible sur les photos aériennes des années 1950. D’autres forment deux lignes parallèles de creusements allongés, certainement destinés à accueillir les supports de superstructures qu’il est difficile de restituer. On note également trois vases de bornage des XVIIe-XVIIIe siècles.

  • Impacts sanitaires et environnementaux de matières plastiques biosourcées, biodégradables et compostables

    Véronique Coma, Franck Cleymand, Isabelle Deportes, Frédéric Feder, Johnny Gasperi, Laure Geoffroy, Bourgeois Damien, Yrieix Christophe, Aymard Alain, Belzunces Luc, Bertrand Nicolas, Billault Isabelle, Husson Jérôme, Karr Guillaume, Leiterer Alexandra, Lepoittevin Jean-Pierre, Nicolas Mélanie, Paul Adèle, Pecquet Catherine, Robert Sophie, Rousseaux Patrick, Sapori Jean-Marc, Leconte Stéphane, Maniere-Guerrero Isabelle, Mathieu-Huart Aurélie
    [Rapport de recherche] Saisine n° 2021-SA-0202, Anses; IFSTTAR - Institut Français des Sciences et Technologies des Transports, de l'Aménagement et des Réseaux. 2022, 10 + 71 p | Publiée le 1 juillet 2022
    Rapport

    Trois cent soixante-sept millions de tonnes de matières plastiques sont produites chaque année dans le monde1. Elles sont principalement issues de la pétrochimie (carbones fossiles) et certaines peuvent être issues de la biomasse vivante (carbones biosourcés). La loi relative à la lutte contre le gaspillage et à l’économie circulaire, dite loi AGEC, promulguée le 11 février 2020, comprend plusieurs dispositions visant à prévenir l’impact de l’utilisation des matières plastiques sur la santé et l’environnement dont l’article 84. Cet article prévoit que le Gouvernement remette au Parlement un rapport sur les impacts sanitaires, environnementaux et sociétaux des matières plastiques biosourcées, biodégradables et compostables sur l’ensemble de leur cycle de vie. Ce rapport doit notamment aborder le risque de dispersion des microplastiques dans l’environnement lié au compostage des matériaux plastiques biosourcés, biodégradables et compostables. À ce jour, la contamination environnementale par les microplastiques issus de la pétrochimie est avérée dans l’atmosphère et l’air intérieur, les eaux urbaines et continentales ainsi que dans les sols . Le Parlement a souhaité approfondir les impacts des matières plastiques sur l’environnement, notamment via les sacs plastiques biosourcés et compostables en conditions domestiques.

  • Avis de l'Anses - Expertise hors évaluation des risques relatives à l’état des connaissances sur la présence ou l’émission de substances dangereuses dans des fournitures scolaires et de bureau et leur impact éventuel sur la santé

    Damien Bourgeois, Christophe Yrieix, Alain Aymard, Luc Belzunces, Nicolas Bertrand, Isabelle Billault, Isabelle Desportes, Greta Gourier, Jérôme Husson, Guillaume Karr, Alexandra Leiterer, Jean-Pierre Lepoittevin, Mélanie Nicolas, Adèle Paul, Catherine Pecquet, Sophie Robert, Patrick Rousseaux, Jean-Marc Sapori, Céline Dubois, Aurélie Mathieu-Huart
    Saisine n°2020-AUTO-0157, Anses. 2022, 70 p | Publiée le 31 mai 2022
    Rapport

    Plusieurs rapports, essais et études ont mis en évidence la présence ou l’émission de substances chimiques à partir de fournitures scolaires ou de bureau tels que des composés organiques volatils (COV), des phtalates, des isothiazolinones, des substances parfumantes, (OQAI, 2014 ; OEHHA, 2019 ; ADEME, 2019 ; UFC Que Choisir, 2016 ; INC, 2017). La présence et/ou l’émission de substances dangereuses à partir d’articles peut entraîner une exposition par inhalation, contact cutané mais également par ingestion, en particulier chez les enfants qui présentent un comportement spécifique avec de nombreux contacts main-bouche et la mise en bouche d’objets. Pour limiter ces expositions, plusieurs projets (avec pour objectifs d’informations, sensibilisation …) ont vu le jour ces dernières années en France tels que le projet régional TROUSS’AIR pour la Ville de Grenoble finalisé en 2018 ou « le cartable sain » en Gironde. L’Agence de l'Environnement et de la Maîtrise de l'Énergie (ADEME) a également proposé une fiche d’aide au choix des fournitures scolaires « sans risque pour la santé et l’environnement », en mai 2019, préconisant l’achat de fournitures portant notamment des labels environnementaux. Par ailleurs, la possible contribution des fournitures scolaires à la pollution de l’air dans les écoles a été suggérée comme une piste d’étude par les organismes impliqués dans ce domaine, notamment l’Observatoire de la Qualité de l’Air Intérieur (OQAI), lors de sa campagne de mesure de la qualité d’air intérieur dans les maternelles, finalisée en 2018. La Direction générale de la concurrence de la consommation et de la répression des fraudes (DGCCRF) a également mené une enquête sur les allégations environnementales des fournitures scolaires en 2020 mettant en évidence des anomalies. Au niveau européen, des discussions se sont tenues en 2017 sur l’obligation d’étiquetage des articles d’écriture, en lien avec l’application du règlement 1272/2008/CE « Classification, Labelling and Packaging », posant la question plus large de la présence de substances classées pour leurs effets sur la santé, présentes dans des mélanges utilisés dans la fabrication de fournitures scolaires. Enfin, deux questions parlementaires ont porté sur cette thématique dont une a été adressée à l’Anses en novembre 2018 qui visait à connaitre l’avis de l’agence ou son intention de se saisir de cette problématique. Le présent avis a ainsi pour objectif de réaliser un état des connaissances sur la présence ou l’émission de substances dangereuses dans des fournitures scolaires ou de bureau et leur impact éventuel sur la santé.

  • Avis de l'Anses relatif à la mise à jour des référentiels d’évaluation pour les housses et cuvettes funéraires, pour les cercueils hermétiques et les dispositifs épurateurs de gaz

    Armand Lattes, Pierre-Marie Badot, Jean-Charles Benezet, Gérard Blake, Claude Bouriot, Catherine Dalm, Marc Jequel, Chantal Lardy, Christian Lecarpentier, Pierre Maris, Bernard Sillion, Fabien Squinazi, Damien Bourgeois, Christophe Yrieix, Alain Aymard, Luc Belzunces, Nicolas Bertrand, Isabelle Billault, Isabelle Deportes, Jérôme Husson, Guillaume Karr, Alexandra Leiterer, Jean-Pierre Lepoittevin, Mélanie Nicolas, Adèle Paul, Catherine Pecquet, Sophie Robert, Patrick Rousseaux, Jean-Marc Sapori, Stéphanie Marsteau, Audrey Malrat-Domenge, Cécilia Solal
    Saisine n°2020-SA-0180, Anses. 2022, 39 p | Publiée le 3 mai 2022
    Rapport

    Les articles R. 2213-15 et R. 2213-27 du Code général des collectivités territoriales (CGCT) stipulent les éléments suivants : Art. R. 2213-15 du CGCT : Avant son inhumation ou sa crémation, le corps d'une personne décédée est mis en bière. La housse imperméable éventuellement utilisée pour envelopper le corps avant sa mise en bière est fabriquée dans un matériau biodégradable. Elle doit répondre à des caractéristiques de composition, de résistance et d'étanchéité fixées par arrêté du ministre chargé de la santé après avis de l'Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail et du Conseil national des opérations funéraires. Si la personne décédée est porteuse d'une prothèse fonctionnant au moyen d'une pile, un médecin ou un thanatopracteur procède à son explantation et atteste de la récupération de cette prothèse avant la mise en bière. Toutefois, l'explantation n'est pas requise lorsque la prothèse fonctionnant au moyen d'une pile figure sur la liste fixée par arrêté des ministres chargés de l'intérieur et de la santé après avis du Haut Conseil de la santé publique, au regard des risques présentés au titre de l'environnement ou de la sécurité des biens et des personnes. Cet arrêté peut distinguer selon que la personne fait l'objet d'une inhumation ou d'une crémation. Art. R. 2213-27 du CGCT : Les cercueils hermétiques doivent être en matériau biodégradable et répondre à des caractéristiques de composition, de résistance et d'étanchéité fixées par arrêté du ministre chargé de la santé après avis de l'Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail et du Conseil national des opérations funéraires. Ils doivent ne céder aucun liquide au milieu extérieur, contenir une matière absorbante et être munis d'un dispositif épurateur de gaz répondant à des caractéristiques de composition de débit et de filtration fixées par arrêté du ministre chargé de la santé après avis de l'Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail et du Conseil national des opérations funéraires. Lorsque le défunt était atteint de l'une des infections transmissibles dont la liste est fixée au a de l'article R. 2213-2-1, le corps est enveloppé dans un linceul imbibé d'une solution antiseptique. Avec pour objectif de préciser les caractéristiques évoquées ci-dessus, devant être fixées par arrêté du Ministère chargé de la santé après consultation de l’Anses et du Conseil national des opérations funéraires (CNOF), l’Anses a confié en 2009 au groupe de travail « Agrément des produits de thanatopraxie et matériaux funéraires », la réalisation de deux référentiels d’évaluation : - l’un portant sur les housses et cuvettes funéraires publié en juillet 2010 (saisine n°2009-SA-0340) ; - l’autre portant sur les cercueils hermétiques et dispositifs épurateurs de gaz publié en novembre 2011 (saisine n°2009-SA-0341). Ce groupe de travail était rattaché au CES (Comité d’experts spécialisés) « Évaluation des risques liés aux substances et produits biocides ». Pour chaque caractéristique citée dans les articles du CGCT, le groupe de travail avait retenu des normes d’essais existantes et considérées par les experts comme étant les plus pertinentes (aucune norme ne portant alors spécifiquement sur les matériaux funéraires). Les référentiels ainsi produits devaient servir à la prise de l’arrêté par le Ministère chargé de la santé comme indiqué dans les articles du CGCT mais également de base de réflexion à une commission de normalisation pour l’élaboration de normes spécifiques à ces catégories d’articles funéraires. Cet arrêté n’ayant pas été pris à ce jour et avant qu’il ne le soit, la DGS saisi l’Anses, en décembre 2020, afin de mettre à jour ces deux référentiels et de prendre en compte de nouveaux éléments techniques tels que les cercueils intégrés réalisés avec un matériau autre que le zinc. [Saisines liées n°2009-SA-0340 et 2009-SA-0341]

  • Note d’appui scientifique et technique de l’Anses relative au projet de décret relatif à l’information sur les produits de protection intime

    Damien Bourgeois, Christophe Yrieix, Alain Aymard, Luc Belzunces, Nicolas Bertrand, Isabelle Billault, Isabelle Deportes, Jérôme Husson, Guillaume Karr, Alexandra Leiterer, Jean-Pierre Lepoittevin, Mélanie Nicolas, Adèle Paul, Catherine Pecquet, Sophie Robert, Patrick Rousseaux, Jean-Marc Sapori, Céline Dubois, Aurélie Mathieu-Huart
    Saisine n°2022-SA-0106, Anses. 2022, pp.22 | Publiée le 1 janvier 2022
    Rapport

    En 2019, l’Anses a publié un avis et un rapport sur la sécurité des protections intimes. Cette expertise n’a pas mis en évidence de préoccupation sanitaire liée aux substances chimiques présentes dans ces produits. Cependant, le principal risque documenté lié au port de protections intimes internes (tampon, coupe menstruelle) est le syndrome de choc toxique menstruel (SCT) qui, bien que rare, peut entrainer de graves conséquences sur la santé des femmes qui en sont victimes. Les protections intimes externes (serviettes, protège-slips) n’ont jamais été impliquées dans le SCT menstruel. Depuis cette expertise, des actions ont été mises en œuvre par le Gouvernement afin d’inciter les industriels à mettre en place des autocontrôles périodiques des produits et à améliorer leur processus d’approvisionnement et de fabrication de façon à supprimer ou limiter autant que possible la présence de substances chimiques préoccupantes (HAP, dioxines, furanes, phtalates, pesticides notamment). D’autre part, des contrôles périodiques ont été diligentés sur ces produits par la DGS et la DGCCRF dont les derniers résultats d’enquête sur les nouveaux produits de protection intime (serviettes réutilisables ou culottes menstruelles, tampons à usage unique dits « biologiques » ou réutilisables) ont été publiés en mars 2022. La DGCCRF et la DGS ont rédigé conjointement un projet de décret qui vise à renforcer la protection et l’information des consommatrices et en particulier l’information spécifique sur les produits de protection intime sur les trois points essentiels suivants : la composition de ces produits, les modalités et précautions d’utilisation et les risques sanitaires associés à la composition ou l’utilisation de ces produits. Dans ce contexte, la DGCCRF et la DGS souhaitent disposer d’un avis de l’Anses sur le projet de décret relatif à l’information sur les produits de protection intime, en particulier sur les modalités et précautions d’utilisation mentionnées en annexe de ce projet, telles que notamment le temps de port maximal recommandé des produits de protection intime à usage interne et la recommandation d’utilisation des produits de protection intime à usage externe la nuit.

  • Analyse moléculaire de substances organiques provenant des céramiques de Berstett

    N. Tarifa-Mateo, Philippe Schaeffer, Pierre Adam
    [Rapport de recherche] UMR 7177. 2021 | Publiée le 29 novembre 2021
    Rapport

    Nous avons réalisé l'analyse moléculaire par chromatographie gazeuse couplée à la spectrométrie de masse (GC-MS) des extraits lipidiques de dix échantillons de céramiques qui ont été échantillonnés au niveau de la partie intérieure des céramiques par un décapage mécanique (Dremmel) de la surface, sur une profondeur de quelques millimètres. Les quantités de poudre échantillonnées sont de l'ordre de 0,1 à 3 grammes (Tableau 1). N° d'Identification Référence Masse (g) des échantillons extraits avec BuOH/HCl Masse (g) des échantillons extraits avec MeOH/H 2 SO 4

  • Occupations de bas de versant entre Kochersberg et plaine alluviale rhénane, de la Pré- et Protohistoire à l’époque moderne. Grand Est, Bas-Rhin, Vendenheim « Bruehl », Eckwersheim « Kleine Seite », A355-Contournement Ouest de Strasbourg,, tronçon 5 - site 5.1, Rapport d’opération

    Matthieu Michler, P. Adam, Fanny Chenal, Patrick Clerc, Cyrille Delangle, Marieke van Es, Clément Féliu, Florent Jodry, Charlotte Leduc, Philippe Lefranc, Perthuisson Julien, Cécile Plouin, P. Schaeffer, Nathalie Gartiser-Schneider, Yohann Thomas, Julian Wiethold
    [Rapport de recherche] Inrap. 2020, pp.440 | Publiée le 1 janvier 2020
    Rapport

  • Obernai (Bas-Rhin). Parc d'activités économiques intercommunal : 6000 ans d'Histoire au pied du Mont Sainte-Odile

    Clément Féliu, Pierre Adam, Géraldine Alberti, Christophe Grazi, Rose-Marie Arbogast, Fanny Bricka, David Cambou, Madeleine Châtelet, Fanny Chenal, Patrick Clerc, Blandine Courel, Marie-France Deguilloux, Frédérique Durand, Quentin Ebert, Pierre Girard, Bernard Gratuze, Sylvain Griselin, Fabienne Médard, Sylviane Humbert, Marie-Hélène Pemonge, Pierre Justeau, Lydie Joan, Philippe Lefranc, Florent Jodry, Christel Leyenberger, Fanny Mendisco, Delphine Minni, Hélène Réveillas, Emile Moser, Amélie Pélissier, Maïté Rivollat, Élisabeth Rousseau, Philippe Schaeffer, Nathalie Schneider, Marieke van Es, Cécile Véber
    [Rapport de recherche] Inrap. 2017, 7 volumes, 1841 p | Publiée le 1 janvier 2017
    Rapport

  • Sarrewerden, le long de la RD 8 : un établissement fossoyé de La Tène finale en Alsace Bossue

    Clément Féliu, Fabienne Olmer, Nathalie Schneider, Patrick Clerc, Florent Jodry, Frédérique Durand, Émilie Guthmann, Blandine Courel, Philippe Schaeffer, Pierre Adam
    [Rapport de recherche] Inrap. 2015 | Publiée le 1 janvier 2015
    Rapport

    Une centaine de structures a été mise au jour ; elles permettent de documenter trois phases d’occupation du Hallstatt, de La Tène finale et de l’époque moderne. La première, d’une densité assez faible, est datée du Hallstatt. Elle est caractérisée par quelques fosses et des trous de poteau qui dessinent le plan d’un bâtiment. La dernière correspond à des aménagements liés à la mise en culture de la parcelle au cours des derniers siècles, entre autres une série de fosses de plantations alignées parallèlement à la pente. L’occupation la plus importante est datée de La Tène finale (LT D1b-D2a). Elle consiste en un établissement rural de La Tène finale délimité par un fossé d’enclos, au tracé rectiligne, dont seul un angle a été dégagé. L’intérieur du site comportait trois bâtiments de différentes tailles, dont le plus grand semble avoir connu plusieurs réfections. Une quatrième construction se développe vers le nord, en dehors de l’enclos et de la parcelle décapée. Le mobilier mis au jour indique le statut élevé de cet établissement dans la campagne gauloise. Trois fibules, une amulette en bronze, deux monnaies ont été découvertes et l’étude d’un lot important d’amphores italiques a été réalisée. En effet, plus de 400 individus ont été dénombrés. La grande majorité d’entre eux portent les stigmates caractéristiques de destruction, généralement mise en relation avec les banquets : cols sabrés, anses détachées, fonds découpés. La répartition des amphores dans le fossé d’enclos rattache ce site aux occupations de la fin de l’époque gauloise connues pour avoir abrité des pratiques ritualisées liées à la consommation massive de vin.

  • CASKA – Navires et navigation en Dalmatie romaine : recherches d’archéologie maritime et navale à Caska (île de Pag, Croatie). Rapport des opérations 2012

    Giulia Boetto, Kalliopi Baika, Evelyne Bukowiecki, Carine Cenzon-Salvayre, Armelle Charrié-Duhaut, Dimitris Christodoulou, Lucile Delavault, Vincent Dumas, Maria Geraga, Philippe Groscaux, Stavroula Kordella, Frédéric Guibal, George Papatheodorou, Margaux Tiller
    [Rapport de recherche] Ministère des affaires étrangères et européennes. 2012, 65 p | Publiée le 1 janvier 2012
    Rapport

  • Thèse
  • Caractérisation moléculaire d’ambres géologiques et archéologiques : origines botaniques et géographiques

    Alice Fradet
    Chimie analytique. Université de Strasbourg, 2025. Français. ⟨NNT : 2025STRAF009⟩ | Publiée le 19 mars 2025
    Thèse

    Les travaux de cette thèse comprennent deux volets dédiés à l'étude moléculaire d’ambres issus de formations géologiques et trouvés en contexte archéologique. Le premier volet, d’ordre paléobotanique, vise à établir une corrélation entre les signatures moléculaires d’ambres et leurs sources botaniques. Un référentiel moléculaire d’ambre de différents sites européens et méditerranéens a ainsi été établi. Cette étude a notamment permis de proposer une typologie moléculaire pour les ambres de Cheirolepidiacées, une famille éteinte de conifères, et de mettre en évidence une nouvelle famille de composés organo-soufrés en tant que marqueurs environnementaux. Dans le second volet, une méthode permettant le prélèvement et l’analyse de très petits échantillons a été développée et utilisée dans le cas d’ambres archéologiques afin d’en déterminer l’origine géographique. Cette étude a mis en évidence l’origine baltique d’un grand nombre d’échantillons de l’Age du Fer et du Bronze, l’origine plus locale d’échantillons plus anciens et d'identifier la nature de matériaux utilisés pour des opérations de restauration dans le cas d’ambre de collections de musées.

  • Development of MRI sensors containing a peptide or thiosemicarbazone motif for the detection of copper(II) in biological samples

    Katharina Zimmeter
    Medicinal Chemistry. Université de Strasbourg, 2024. English. ⟨NNT : 2024STRAF046⟩ | Publiée le 6 décembre 2024
    Thèse

    Exchangeable copper, which is primarily bound to human serum albumin (HSA) in the blood, is a potential biomarker for diseases such as Wilson's and Alzheimer's. To date, there is no specific method for its detection in vivo. This thesis presents progress in the design of CuII-responsive MRI (magnetic resonance imaging) probes through two approaches: q-based and τR-based contrast agents (CAs), each containing a gadolinium complex and a CuII-specific ligand. One part of the work is dedicated to the development of ligands adapted to these two approaches, with sufficient CuII-affinity and selectivity: derivatives of the peptidic ATCUN motif for q-based probes and α-pyridyl thiosemicarbazones for τR-based probes. The other part focuses on their incorporation into MRI CAs and their characterization. The probes studied proved the principle of both approaches, although optimizations are still needed. An increase in relaxivity of nearly 400% was observed for the q-based CA, DO3A-pyrGH, in the presence of CuII, and a small but notable increase for τR-type probes in the simultaneous presence of CuII and HSA.

  • Etude structurale et fonctionnelle des assemblages supramoléculaires du peptide Vectofusin-1

    Romuald Manca
    Chimie thérapeutique. Université de Strasbourg, 2024. Français. ⟨NNT : 2024STRAF063⟩ | Publiée le 25 novembre 2024
    Thèse

    Les peptides de la famille LAH4 sont des peptides cationiques qui se replient en hélices alpha et in- teragissent avec les membranes phospholipidiques. Ces peptides peuvent s’assembler en nano-fibrilles. Dans cette thèse, nous avons étudié le dérivé LAH4-A4 breveté sous le nom Vectofusin-1. Une étude fonctionnelle a révélé que ses propriétés d’auto-assemblage influencent son activité biologique en tant qu’adjuvant améliorant la transduction lentivirale. Lors d’une collaboration avec le laboratoire ART- TG, nous avons montré que les formes fibrillaires et monomériques de Vectofusin-1 diffèrent en activité biologique, notamment selon le type cellulaire. Un protocole de production et purification du peptide Vectofusin-1 basé sur l’expression en système bactérien avec marquage isotopique a été mis en place. Une étude biophysique, par microscopie électronique, a démontré que la formation de fibrilles dépend de paramètres précis comme le pH, le solvant et la température. Une étude structurale par RMN du solide a permis de caractériser en partie les interactions impliquées dans la formation et la stabilisation des fibrilles.

  • Unraveling the mode of action of antimicrobial peptide mimetics in model membrane environments : a biophysical study

    Kathakali De
    Other. Université de Strasbourg, 2024. English. ⟨NNT : 2024STRAF064⟩ | Publiée le 17 septembre 2024
    Thèse

    Due to the rise of antimicrobial resistance, the antimicrobial peptide (AMP) and its various synthetic mimics are much in focus. In this thesis, three branches of AMP mimics; Small molecule mimics (aryl-alkyl-lysine based, detergent inspired, and cyclam-based), Cyclic peptides (rich with three arginine and three tryptophan units), Peptoids (triazolium cationic peptoids), and also AMPs (SFV33 and GVR28) derived from collagen VI are investigated. These synthetic mimics are designed using the template of AMP (amphipathic nature and cationic charge). The aim of this thesis is to do biophysical studies of the peptide/compound-membrane interaction to understand the driving force of the antibacterial activities exhibited by these mimics and peptides discussed. Non-oriented solid-state NMR, fluorescence, and circular dichroism studies done with various model membranes show that these peptides/compounds not only undergo interaction with the bacterial membranes but also show clear selectivity towards the bacterial membrane over the eukaryotic membrane.

  • Modèles supramoléculaires d’hémoprotéines

    Mathilde Berthe
    Autre. Université de Strasbourg, 2024. Français. ⟨NNT : 2024STRAF078⟩ | Publiée le 6 septembre 2024
    Thèse

    Plus de 95 % du dioxygène consommé par les organismes aérobies est utilisé dans la respiration cellulaire. Dans les mitochondries, le site actif hétéro-binucléaire hème/cuivre de cytochrome c oxydase catalyse la réduction de l'oxygène en eau par une voie tétra-électronique. Cette réactivité est finement ajustée par le haut degré de sophistication de la structure peptidique qui entoure le site actif. Dans ces échafaudages moléculaires, l'enveloppe polypeptidique contrôle à la fois la solubilité, l'accès des ligands exogènes au site actif et la réactivité de l'hème central. Dans ce contexte, ces travaux de thèse se sont intéressés à la conception de modèles de cytochrome c oxydase pour l’électro-réduction du dioxygène. Deux modèles de l’enzyme ont été élaborés à partir de complexes d’inclusion cyclodextrines/porphyrine auto-assemblés en milieu aqueux. Dans ces modèles, les cyclodextrines assurent la solubilité dans l'eau de l’édifice supramoléculaire et imitent l’environnement globulaire de protéine en créant un environnement hydrophobe à proximité du site actif porphyrinique. Une fois formés, la sphère de coordination de ces composés modèles a été étudiée en milieu aqueux par spectroscopie UV-visible et spectroscopie RPE, tandis que leurs réactivités vis-à-vis du dioxygène ont été étudiées en électrochimie. En parallèle, une nouvelle porphyrine à anse bipyridine a été synthétisée via une synthèse à effet de matrice. Après avoir formé le complexe fer/cuivre associé, soluble en milieu organique, ses propriétés en tant qu’électro-catalyseur pour la réduction du dioxygène en eau ont également été explorées.

  • From lipid-mediated molecular interactions to a synergistic antimicrobial activity : a study of PGLa and magainin 2 amphipathic peptides using NMR spectroscopy and in silico molecular dynamics simulations

    Adrien Gebus
    Other. Université de Strasbourg, 2024. English. ⟨NNT : 2024STRAF017⟩ | Publiée le 22 avril 2024
    Thèse

    PGLa and magainin 2 are two amphiphilic peptides that exhibit synergistic antimicrobial activity. The structure, dynamics, and interactions of these peptides with membranes were studied. Solid-phase and liquid-phase NMR spectroscopy provided information on the structure of PGLa in a hydrophobic environment. A 3D model of PGLa in micelles was constructed, and different populations of PGLa in lipid bilayers were identified. MD simulations were used to investigate the interaction of PGLa and magainin 2 with each other and with the membrane. A mode of recruitment of these peptides, as well as a form of interaction with it, in 'clusters' was deduced. Additionally, a model for the insertion of these peptides into the membrane, known as the 'flip', was discovered. The role of PGLa lysines in these actions was also demonstrated, notably by mutating these residues to arginine for structural, dynamic, and antimicrobial comparison.

  • Copper(I)-doped zeolites as green catalysts for organic synthesis

    Xiaohui Di
    Other. Université de Strasbourg, 2024. English. ⟨NNT : 2024STRAF012⟩ | Publiée le 10 avril 2024
    Thèse

    Aryl rings are a predominant feature in numerous biologically active compounds. Most of them can exist as biaryl, phenol, and tetrahydroisoquinoline moieties, which are encountered in many natural products and in various important synthetic intermediates. In the last few decades, various (transition) metal-catalyzed coupling reactions have emerged to synthesize such motifs or molecules via the formation of carbon-carbon bonds or carbon-heteroatom bonds. However, most of them were performed under homogeneous conditions with unsatisfactory reaction conditions, such as high temperatures, toxic solvents, and additional bases and ligands. To improve the greenness and sustainability of these processes, the potential of copper-doped zeolites as heterogeneous and recyclable catalysts was evaluated for the synthesis of biaryls, phenols, and tetrahydroisoquinoline derivatives through the study of several coupling reactions, such as homocoupling-type reactions, Chan-Lam-Evans-type cross-coupling and cross-dehydrogenative coupling reactions. Several efficient and economical catalytic procedures were developed under greener and milder conditions without the need for any additional ligand and base.Furthermore, the application of the so-obtained important biaryl motifs has also been explored in Diels–Alder reactions for the construction of heterocycles of interest with high atom economies.

  • Towards the design of an immersible NMR probe for solution reaction monitoring

    Chunchesh Malangi Gajendramurthy
    Other. Université de Strasbourg, 2024. English. ⟨NNT : 2024STRAF007⟩ | Publiée le 25 mars 2024
    Thèse

    This endeavour represents a pioneering effort to design and develop a cost-effective low-field Dip-NMR or Immersible NMR system dedicated to monitoring reaction mixtures at the closest possible source of information. While we have successfully designed and optimized the first version of prototype capable of acquiring single scanned NMR spectra of pure samples, further focused study and research are highly warranted to develop and integrate prototype into an immersible probe unit capable of multi-channel acquisition to realize the proposed Dip-NMR system. The NMR spectra obtained from Dip-NMR system were notably broad and necessitated dedicated chemometric methods for quantification and kinetic data extraction. Known reactions were monitored on a high-field high-resolution NMR spectrometer, with the kinetic data from this instrument serving as benchmark data for comparison and evaluation against the data obtained from Dip-NMR system. Various chemometric methods were explored and tested on the mimicked spectra for quantification and kinetic data extraction, with the results subsequently compared with the benchmark data. In parallel with the project’s goal, hydrosilylation reactions involving organic substrates such as nitriles, cyclic amides, and esters were catalyzed using an Ir(III) catalyst and monitored on a high-field high-resolution NMR spectrometer. These investigations have successfully yielded valuable insights into the reactions, contributing to a deeper understanding of the processes involved and laid important reference kinetic data for future testing of an advanced Dip-NMR probe prototype.

  • Contrôle allostérique de la synthèse et des propriétés de [2]rotaxanes incorporant une cage moléculaire

    Sonia Adrouche
    Autre. Université de Strasbourg, 2023. Français. ⟨NNT : 2023STRAF057⟩ | Publiée le 15 décembre 2023
    Thèse

    Les travaux effectués dans le cadre de cette thèse portent sur le contrôle allostérique de la synthèse et des propriétés de [2]rotaxanes dont le constituant habituel, le macrocycle, est remplacé par une cage moléculaire. Cette cage moléculaire est constituée de deux porphyrines de zinc(II) liées par quatre anses flexibles dont chacune incorpore deux ligands triazoles. La stratégie de synthèse employée pour la formation de ces entrelacs repose sur la formation d’un [2]semirotaxane par un contrôle allostérique de la réaction d’enfilage de la cage au travers de l’axe monobouchonné, grâce à des ions Ag(I) ou Na+. Trois [2]semirotaxanes ont été synthétisés avec succès. Dans le premier, l’axe incorpore une station de nature π-accepteur de type naphtalène diimide (NDI), tandis que les deux autres contiennent un ligand ditopique, la pyrazine. Les [2]semirotaxanes dont l’axe est fonctionnalisé par une station pyrazine ont été convertis en [2]rotaxanes avec de bons rendements. La stabilité du [2]rotaxane contenant quatre ions Ag(I) a été démontrée. La décoordination des ions Ag(I) ou Na+ modifie la flexibilité de la cage des [2]rotaxanes et permet le désenfilage de l’haltère. La cinétique de désenfilage du [2]rotaxane a été étudiée par RMN 1H et les temps de demi-vie ont été évalués à trois températures. L’ensemble des résultats obtenus lors de ces travaux témoignent de l’efficacité du contrôle allostérique pour la formation de rotaxanes et pour l’étude de leurs mouvements.

  • Vers la synthèse de prodrogues multimodales ciblant les bactéries endotumorales : le double rôle de la voie du 2-C-méthyl-D-érythritol 4-phosphate (MEP)

    Alizée Allamand
    Autre. Université de Strasbourg, 2023. Français. ⟨NNT : 2023STRAF055⟩ | Publiée le 13 décembre 2023
    Thèse

    La voie métabolique du méthylérythritol phosphate (MEP), permettant la biosynthèse des isoprénoïdes, est présente chez la majorité des bactéries pathogènes, mais complètement absente chez l'homme. Ainsi, les sept protéines enzymatiques de cette voie sont des cibles potentielles pour le développement d’antibactériens inédits aux effets secondaires minimes. En outre, cette voie de biosynthèse interviendrait dans la réponse immunitaire puisque son dernier intermédiaire, le HMBPP, est un phosphoantigène (PAg) capable de stimuler la prolifération des lymphocytes T Vγ9Vδ2. S'appuyant sur cette dualité de fonction, ce travail se propose de concevoir des prodrogues multimodales originales visant à délivrer simultanément un inhibiteur de la voie du MEP et un immunostimulant de manière sélective en conditions hypoxiques afin de pouvoir cibler les bactéries endotumorales. La première partie a été consacrée à la synthèse de prodrogues d'inhibiteurs phosphonates de la DXR, seconde enzyme de la voie du MEP, et de prodrogues cycloSaligényle d'analogues monophosphates d'inhibiteurs d'IspH, dernière enzyme de cette voie. Seules les prodrogues cycloSaligényle ont pu être obtenues et celles substituées par un Cl ont montré une nette activité antibactérienne chez M. smegmatis. En parallèle, la synthèse de prodrogues cycloSaligényle du HMBP, précurseur monophosphate du HMBPP, a permis d’obtenir les produits en faible quantité. Enfin, les premières étapes de la synthèse des prodrogues multimodales, contenant à la fois un inhibiteur et un PAg liés par un squelette tyrosine, ont été initiées et les composés intermédiaires obtenus. L'activité antibactérienne de l'ensemble des composés synthétisés a été évaluée vis-à-vis des bactéries E. coli, K. pneumoniae, B. subtilis, P. aeruginosa et M. smegmatis.

  • Quantum dynamics of the diffusion of adsorbates

    Oussama Bindech
    Theoretical and/or physical chemistry. Université de Strasbourg, 2023. English. ⟨NNT : 2023STRAF071⟩ | Publiée le 8 décembre 2023
    Thèse

    The present thesis aims at studying the dynamics of adsorbates following a fully quantum theoretical approach. We are particularly interested in the H/Pd(111) and H2 /Pd(111) systems. A large part of this work is related to the study of the vibrational states and eigenenergies of the hydrogen atoms on the palladium surface. This study showed the presence of tunneling and Fermi resonance coupling of localized vibrational modes of the system. Numerical simulations highlighting the manifestation of these two quantum effects in the dynamical behavior of hydrogen atoms on the palladium surface are presented. We finally propose a new method to calculate the intermediate scattering function (ISF) which relies on a quantum stochastic approach. A preliminary result is confronted with spin echo experiments.

  • Biophysical and structural studies of bioactive peptides derived from the piscidin family in anionic membrane models

    Kelton Rodrigues de Souza
    Chemical Sciences. Université de Strasbourg, 2023. English. ⟨NNT : 2023STRAF085⟩ | Publiée le 1 décembre 2023
    Thèse

    Antimicrobial peptides hold promise for the design of new antibacterial drugs due to their low tendency for resistance development and their ability to eliminate multidrug-resistant bacteria. Our investigations aim to study the mechanisms of action of the new ecPis-4s and ecPis-2s peptides. Furthermore, we proposed to study the epimeric form of ecPis-2s, since natural antimicrobial peptides containing D- residues have been reported to have broad antimicrobial activities. The results obtained indicate that ecPis-4s adopt a well-defined amphipathic helical conformation, oriented parallel to the surface of the phospholipid bilayer, with a strong affinity for anionic membranes and a concentration-dependent lytic activity. Regarding epimeric peptides, our results show that the epimeric D-ecPis-2s exerts a more remarkable effect on membrane stability. The D- amino acid configuration appears to give the peptide structure a greater amphipathic character compared to the natural L-ecPis-2s peptide.

  • Exploring the allosteric modulation of the nicotinic acetylcholine receptor alpha 7 by molecular dynamics simulations

    Mariia Avstrikova
    Cheminformatics. Université de Strasbourg, 2023. English. ⟨NNT : 2023STRAF061⟩ | Publiée le 1 décembre 2023
    Thèse

    The nicotinic acetylcholine receptor α7 (α7 nAChR), part of the pentameric Ligand-Gated Ion Channel(pLGIC) superfamily of synaptic receptors, plays a crucial role in neural signal transmission, impactinglearning, memory, and attention. This receptor is implicated in a variety of diseases includingneurological disorders and even COVID-19, which makes it an interesting pharmacological target. It is imperative for rational drug discovery to gain a structural understanding of the receptor's functioning. In this thesis work, we apply molecular dynamics simulations to explore α7 nAChR at its various conformational states. Through these simulations, we gain a better understanding of thedesensitization process in this type of receptor. This knowledge sheds light on the mechanism of action of various positive allosteric modulators of α7 nAChR.

  • C- et O-glycosylations : de nouveaux développements "en or

    Eliot Starck
    Autre. Université de Strasbourg, 2023. Français. ⟨NNT : 2023STRAF051⟩ | Publiée le 10 novembre 2023
    Thèse

    Les glycosides ont toujours retenu l’attention de la communauté scientifique en raison de leurs utilités en chimie de synthèse et dans la compréhension de leurs divers rôles dans le Vivant. De ce constat, émerge la nécessité de développer des méthodes de synthèse innovantes permettant un accès rapide et efficace à des sucres toujours plus élaborés. Afin d’outre-passer un grand nombre de limites synthétiques, le chimiste organicien dispose d’un outil puissant tant pour façonner des molécules complexes que pour découvrir de nouvelles réactivités : la catalyse organométallique.C’est dans ce cadre que s’inscrivent ces travaux de thèse dont l’objectif est le développement de nouvelles voies de synthèses stéréosélectives de C-glycosides d’alcynyle et de 2-énopyranosides. Ces approches se basent sur l’utilisation de complexes d’or(I) comme catalyseur, qui permettent à la fois une -activation et une -activation d’un système insaturé.

  • Complexes de cuivre(II) à ligands redox non-innocents : trifluorméthylation de peptides et application comme sonde en RMN du fluor pour doser le Cu(II) en milieux biologiques

    Marie-Julie Tilly
    Autre. Université de Strasbourg, 2023. Français. ⟨NNT : 2023STRAF091⟩ | Publiée le 20 octobre 2023
    Thèse

    L’introduction du groupement trifluorométhyle (CF3) dans des biomolécules, comme les peptides, est particulièrement utile pour moduler leurs propriétés physico-chimiques. Cependant, la difficulté de créer des liaisons C-CF3 en conditions douces reste un défi chimique. S’inspirant de la chimie redox des métalloenzymes capables de stocker et de libérer des électrons, nous avons exploré l'utilisation de ligands hydrosolubles redox-actifs pour former un complexe à cuivre(II) capable d’effectuer la trifluorométhylation sélective des résidus tryptophanes de peptides dans des conditions douces. La combinaison de ce complexe avec le réactif de Togni II a permis de développer un système catalytique bien défini, générant des radicaux CF3 de manière contrôlée. Par la suite, des méthodes radicalaires ont été appliquées à des peptides à cystéine afin d’étudier la conversion du groupement thiol SH en groupement S-CF3 ou encore la désulfurisation et formation de déhydroalanine. Enfin, ces études ont permis la synthèse de sondes peptidiques trifluorométhylées utilisées pour détecter et quantifier du Cu(II) par RMN 19F dans des échantillons biologiques.

  • Ensemble density functional approach to electronic excitations : exact theory and approximations using quantum embedding

    Filip Cernatic
    Theoretical and/or physical chemistry. Université de Strasbourg, 2023. English. ⟨NNT : 2023STRAF035⟩ | Publiée le 22 septembre 2023
    Thèse

    The thesis focuses on new developments in ensemble density-functional theory (eDFT), which is a time-independent method for describing ensembles of ground and excited electronic states. Formal and practical aspects of the method are discussed in detail. Different approaches for developing density-functional approximations (DFAs) are suggested, with test calculations presented for the asymmetric Hubbard dimer. A new formalism of “extended N-centered” ensembles is proposed, which combines neutral and charged excitations into a single ensemble. This approach elucidates in a new way the concept of derivative discontinuity for neutral excitations. Lastly, a quantum embedding strategy for describing multiple electronic states is proposed, based on the one-electron reduced density matrix (1RDM) formalism.

  • The role of open-shell environments on the spectroscopy of complex spin architectures : wavefunction-based studies

    Pablo Roseiro
    Theoretical and/or physical chemistry. Université de Strasbourg, 2023. English. ⟨NNT : 2023STRAF032⟩ | Publiée le 8 septembre 2023
    Thèse

    This thesis studies the influence of the environment in complex spin architectures. It focuses on open-shell environments in the fields of Organic and Inorganic Chemistry.It starts off by introducing the basic tools and methods for wavefunction calculations used in this work.Then, a model Hamiltonian-based study qualitatively explores the importance of environments in Singlet Fission.It focuses on the so-defined "thermodynamic condition", and highlights the flaws of the "single chromophore" approximation broadly used in the experimental and theoretical community.Finally, a model Hamiltonian and two \textit{ab initio} studies investigate the emergence of a new phenomenon: \textit{spinmerism}.Architectures based on a Spin CrossOver metal ion coordinated to several open-shell ligands are likely to generate states which are a superposition of local spin states. This reshuffles the traditional frozen-spin picture in coordination compounds, in particular in the Tanabe-Sugano diagrams.

  • Design of copper-selective peptide shuttles to prevent toxicity of the Cu-amyloid-β complex linked to Alzheimer's disease

    Michael Uchechukwu Okafor
    Medicinal Chemistry. Université de Strasbourg, 2023. English. ⟨NNT : 2023STRAF027⟩ | Publiée le 30 juin 2023
    Thèse

    To date Alzheimer’s disease (AD) is the most common neurodegenerative disease with hallmarksincluding the apparition, in specific parts of the brain, of intracellular neurofibrillary tangles andextracellular amyloid plaques. The latter results from an abnormal metabolism of Amyloid-betaprecursor protein (APP) leading to the accumulation of Aβ in plaques. Ex vivo analysis of AD patients’brains, show an abnormally elevated concentration of Cu, Zn and Fe in these plaques. Further studiesdemonstrated reduced Cu levels in the entire brain and more specifically in regions heavily affectedin AD. This decrease is accompanied by a decline in neuronal Cu levels and by an increase inextracellular labile Cu promoting reactive oxygen species (ROS) generation. To correct this Cudyshomeostasis in the brain of AD patients, we designed and synthesized novel Cu(II)-selectivepeptide shuttles, capable of retrieving Cu from extracellular Aβ and releasing Cu inside cells. Thisthesis details, firstly the physico-chemical characterization of novel peptide shuttles, followed by incellulo studies using PC12 cells as neuronal model of AD. Finally, we investigated the ability of ourshuttles to protect organotypic hippocampal slices (OHSCs) from Cu insult.

  • Systèmes antioxydants versus prooxydants lors d'évènements dermatologiques : nouvelle approche par RPE pour étudier les espèces radicalaires induites par des xénobiotiques de la peau

    Yannick Port-Lougarre
    Autre. Université de Strasbourg, 2023. Français. ⟨NNT : 2023STRAF008⟩ | Publiée le 1 mars 2023
    Thèse

    L'eugénol et l'isoeugénol sont des composés présents dans de nombreuses huiles essentielles et sont largement utilisés dans les cosmétiques et la parfumerie pour leurs propriétés odorantes. Ces deux composés sont caractérisés par (i) leurs propriétés antioxydantes et cytoprotectrices, mais aussi (ii) leurs activités prooxydantes et cytotoxiques bien connues des dermatologues spécialisés dans l’allergie de contact, ce qui contraint l'industrie européenne à étiqueter leur présence sur les produits cosmétiques manufacturés.Afin de combiner la compréhension de la réactivité des antioxydants avec l'établissement des frontières menant à l'action allergisante de ces molécules, l'objectif de ce travail était d'étudier la formation potentielle d'intermédiaires radicalaires réactifs dans la peau et de comprendre leurs mécanismes d'action. Dans ce contexte, le travail de recherche s'est articulé autour des axes suivants : (i) synthèse d'eugénol et d'isoeugénol contenant des substitutions isotopiques ciblées (13C), (ii) utilisation de la résonance paramagnétique électronique combinée à des sondes de spin (i.e., spin trapping et spin scavenging) sur des modèles d'épiderme humain reconstitué, histologiquement similaires à la peau humaine, afin d'évaluer ce qui pourrait se passer in vivo, (iii) utilisation de techniques alternatives permettant d'apporter des informations complémentaires pour valoriser l'enrichissement isotopique (études de réactivité sur les acides aminés) et (iv) validation de l'utilisation d'un système d'irradiation épidermique par une étude préliminaire sur des composés photo-sensibilisants.

  • Systèmes bioinspirés redox-actifs pour le transfert électronique et les défis synthétiques

    Cheriehan Hessin
    Autre. Université de Strasbourg, 2023. Français. ⟨NNT : 2023STRAF003⟩ | Publiée le 3 février 2023
    Thèse

    La nature détient une astuce récemment découverte qui lui permet d’effectuer des transformations chimiques exigeantes telles que la réduction et la valorisation du dioxyde de carbone et du diazote, des réactions d’enjeu environnemental. Ces transformations ont lieu grâce à la propriété d’inversion des potentiels redox que possèdent certaines molécules organiques telles que les quinones et les flavines, situées dans des enzymes. Cette propriété leur permet de faciliter le second transfert électronique par rapport au premier et leur permet de générer des espèces assez réductrices capables de réaliser ces transformations chimiques difficiles. Cependant, les quinones et flavines ne possédant pas cette propriété d’inversion des potentiels ne sont pas capables d’effectuer ce type de transformation. L’ordre des potentiels redox (inversion ou non) dépend de l’interaction de la molécule organique avec son environnement dans l’enzyme. Nos travaux visent à reproduire ces processus naturels à l’aide d’un système simplifié contenant un métal éco-compatible et des ligands bio-inspirés, possédant cette propriété d’inversion en vue d’applications en catalyse et afin d’effectuer des réactions chimiques compliquées avec des systèmes plus simples que ceux utilisés par la nature. Nos résultats montrent qu’à l’instar du processus naturel l’environnement du complexe influence fortement l’ordre des potentiels redox des complexes ainsi que la réactivité du complexe et permet de moduler le nombre d’électrons transférés. Nous exploitons aussi l’inversion des potentiels dans les transferts multiélectroniques.

  • Synthesis of propargylamines and derivatives through copper catalysis using modified zeolites

    Fabian Schlimpen
    Other. Université de Strasbourg, 2022. English. ⟨NNT : 2022STRAF032⟩ | Publiée le 16 décembre 2022
    Thèse

    Propargylamines are versatile compounds of great synthetic and therapeutic interest with diverse ap-plications as versatile synthetic intermediates and as lead structures in drug design. In recent years, several metal-catalysed methodologies have emerged for their atom- and step-economical prepara-tion. Aiming for improved sustainability, the use of a copper-exchanged zeolite as a heterogeneous catalyst, as well as its recyclability in the synthesis of diverse propargylamines and valuable deriva-tives, were investigated. Several atom- and step-economical catalytic procedures were developed under solvent-free conditions or based on “green” solvents, attractive reagent stoichiometries, and the mildest possible temperatures.

  • Auto-organisation et auto-assemblage de 4,4'-bipyridines et naphtalène diimides

    Jean Joseph
    Autre. Université de Strasbourg, 2022. Français. ⟨NNT : 2022STRAF054⟩ | Publiée le 12 décembre 2022
    Thèse

    Ces travaux de thèse s’intéressent au développement d’interrupteurs moléculaires contractiles ou extensibles dans lesquelles l’animation serait déclenchée par π-dimérisation intramoléculaire de viologènes, dérivés quaternisés de la 4,4’-bipyridine (4,4’-bipy), ou de naphtalène diimides (NDIs). Dans un premier temps, des dérivés de 4,4’-bipys sont fonctionnalisés de façon à interagir avec une surface de graphite pyrolitique hautement orienté dans le cadre de l’élaboration d’un cyclophane bis-viologènes électro-commutable et adsorbable sur graphite. Par la suite, la préparation d’un interrupteur moléculaire hélicoïdal possédant des liens de types spiroborates a été entreprise à partir de ligands contenant des unités 4,4’-bipy ou viologènes. Cet édifice pourrait être réversiblement contracté ou étendu par π-dimérisation intramoléculaire des unités rédox-sensibles. Enfin, le dernier chapitre présente des assemblages de titane(IV) construits à partir de ligands bis(biphénol) comportant des espaceurs 4,4’-bipys ou NDIs. La longueur des ligands, leur flexibilité ou encore l’éventuel ajout de ligands auxiliaires azotés ont été étudiés et leur impact sur la nature des édifices formés est discuté.

  • Electronic and magnetic interactions in porphyrin dimers and new luminescent copper(I) complexes

    Jordan Appleton
    Theoretical and/or physical chemistry. Université de Strasbourg, 2022. English. ⟨NNT : 2022STRAE041⟩ | Publiée le 2 décembre 2022
    Thèse

    The synthesis of porphyrin dimers linked by a metal cation has been carried out. The electronic and magnetic properties of these dimers have been compared with the properties of the porphyrin monomers. Electrochemical studies, electronic spectroscopy and electron paramagnetic resonance (EPR) spectroscopy have shown the influential factors that maximise electronic and/or magnetic communication between the two porphyrin moieties. Further EPR studies with pulsed EPR techniques showed a potential application in the field of qubits. Finally, porphyrin monomers and dimers with alkyl chains self-assembled at a solid/liquid interface formed large motifs that were visualised with STM (Scanning Tunneling Microscopy) techniques. For the second project, phenanthroline ligands were synthesised and used to form stable copper(I) complexes. A wide variety of techniques were utilised in order to determine the optical properties of these photosensitisers : electrochemistry, electronic spectroscopy, fluorescence, X-ray crystallography and DFT calculations.

  • Synthèse et propriétés de systèmes acridiniums cycliques et entrelacés à réponses multiples

    Johnny Hu
    Autre. Université de Strasbourg, 2022. Français. ⟨NNT : 2022STRAF060⟩ | Publiée le 28 novembre 2022
    Thèse

    Les travaux effectués dans le cadre de cette thèse portent sur l’utilisation du fragment acridinium comme unité de reconnaissance au sein d’un macrocycle pour la formation de complexes hôte-invité et pour la formation de rotaxanes. Cette unité possède des propriétés à réponses multiples, à savoir chemiochrome, rédox et photochrome. En premier lieu, la synthèse d’un macrocycle bis-acridinium a été réalisée avec succès. Ce récepteur macrocyclique est capable de reconnaitre des hydrocarbures aromatiques polycycliques (HAPs) par interactions -donneur / -accepteur. Ensuite, les propriétés à réponses multiples de ce récepteur ont été étudiées afin de relarguer les invités capturés. De plus, ce macrocycle s’est révélé être un agent de transfert de phase de HAPs entre le dichlorométhane et un solvant perfluoré. Un deuxième projet s’est concentré sur la synthèse de [2]rotaxanes incorporant le macrocycle bis-acridinium en tant qu’anneau. Les propriétés à réponses multiples du macrocycle ont été envisagées pour le contrôle du mouvement au sein du [2]rotaxane. Les résultats obtenus ont montré que le fragment acridinium est une unité à fort potentiel pour l’élaboration de systèmes entrelacés commutables.

  • Differential electrochemical mass spectrometry (DEMS) studies of nitrite reduction catalyzed by polyoxometallates, silver electrode, and ionic liquid-based hybrid materials

    Yulin Zhou
    Theoretical and/or physical chemistry. Université de Strasbourg, 2022. English. ⟨NNT : 2022STRAF021⟩ | Publiée le 10 novembre 2022
    Thèse

    The electrochemical reduction of nitrite is catalyzed by polyoxometalates (POMs), a class of inorganic metal oxide aggregates soluble in aqueous media. This thesis is focused on the study of the reaction products detected by the technique "Differential Electrochemical mass spectrometry" (DEMS). The gaseous products are nitric oxide (NO) and nitrous oxide (N2O) and their formation potential is closely related to the electrochemical properties of the selected POMs. Microkinetic modeling was used to establish a hierarchy of electrocatalytic efficiencies of a series of Keggin-type POMs where the POM charge was modulated. The reaction mechanism involves HNO as intermediate species. In a second part, tandem catalysis between POMs and a silver working electrode was studied. DEMS studies have highlighted the synergy between the two systems, responsible for the reduction of the overvoltage necessary for the formation of N2O. The reaction mechanism involves the HN2O2 dimer adsorbed on the silver surface. The last part describes the heterogeneous catalysis achieved by a series of hybrid POMs obtained by replacing the counter-cations with a cation from the ionic liquid. The DEMS results are unexpected because the overvoltage necessary for the formation of N2O is further reduced.

  • Conception de peptides de novo s’autoassemblant en hélices β gauche

    Maxime Naudé
    Autre. Université de Strasbourg, 2022. Français. ⟨NNT : 2022STRAF065⟩ | Publiée le 28 octobre 2022
    Thèse

    Les métalloenzymes artificielles représentent une option viable pour concevoir des catalyseurs combinant les avantages de la catalyse homogène et enzymatique afin de remplacer les catalyseurs utilisés de nos jours, souvent à base de métaux rares et issus de la pétrochimie. Pour se faire, une des manières est de concevoir rationnellement de petites unités peptidiques, appelées briques, s’autoassemblant pour former des fibres stables et robustes. Un des repliements identifiés pour cette application est l’hélice β gauche de type I (LβH)(e.g. plusieurs exemples avec des métaux). Cette thèse présente l'analyse de séquences naturelles contenant des LβHs mettant en évidence les résidus importants pour le repliement. Ensuite, à partir de cette analyse, des peptides formant des fibres très susceptibles de se replier en LβΗs ont été conçus et analysés par spectroscopies IR et CD, fluorescence, TEM, modélisation... tout étant en accord avec le repliement attendu. Nous nous sommes également intéressés à la conception d’un motif minimal pouvant permettre la formation de mimes de LβHs étudiés par DRX. Malheureusement, les structures ne sont pas en accord avec le repliement attendu.

  • Développement d'assemblages peptidiques contrôlés pour des applications catalytiques et anti-bactériennes

    Thibaut Galler
    Autre. Université de Strasbourg, 2022. Français. ⟨NNT : 2022STRAF041⟩ | Publiée le 21 octobre 2022
    Thèse

    Cette thèse est composée de deux projets de développement d’assemblages peptidiques contrôlés, l’un pour la catalyse, l’autre à visée antibactérienne.Le premier projet traite du développement d’un hétéroassemblage de peptides courts avec des ions CuII pour la formation contrôlée de mimes de métalloenzymes (ici LPMO). Deux séquences complémentaires ont été utilisées comme support et ils ont été fonctionnalisés afin de former le site de coordination après l’autoassemblage des peptides. Cet objet a été caractérisé par différentes techniques telles que la RPE, l’IR et la MET. Le second projet est le développement d’assemblages peptidiques maintenus par du FeIII ou du GaIII. Cet assemblage est composé d’un peptide antimicrobien, fonctionnalisé avec des ligands affins pour le FeIII (ou le GaIII) afin de relier tous les peptides entre eux et produire un polymère de coordination. Cette structure a été caractérisée par spectrophotométrie et des tests de MIC100.

  • Rational design of allosteric modulators in biomolecular motors : insights into myosins’stability : from molecular modelling to vHTS

    Katia Galentino
    Cheminformatics. Université de Strasbourg, 2022. English. ⟨NNT : 2022STRAF020⟩ | Publiée le 12 octobre 2022
    Thèse

    Myosins are biomolecular motors that coordinate life and motion in cells, by converting chemical energy into mechanical work to walk on actin filament, via a cyclic mechanism . Undertsanding the chemomechanical transduction in these motors has been crucial for decades, but many features remain unknown. Dysfunction of myosins relates to severe human disorders, from myopathies to cancers, becoming relevant targets. In this thesis we studied the dynamics of cardiac myosin and myosinVI in a peculiar configuration state of the actomyosin cycle. We captured a spontaneous transition towards a different intermediate state of the force generation cycle in myosinVI and comparison with the dynamics of cardiac myosin denoted a remarkable plasticity of the structure. We also investigated the two proteins from a pharmacological point of view, with a wide range of computational approaches to design cardiac myosin allosteric activators and to perform a virtual high throughput screening on myosinVI.

  • Cis-chelating cavity-shaped ligands for selective metal-catalyzed oligomerization of ethylene

    Yang Li
    Other. Université de Strasbourg, 2022. English. ⟨NNT : 2022STRAF056⟩ | Publiée le 28 septembre 2022
    Thèse

    This PhD thesis deals with the synthesis of cavity-shaped, cis-chelating bidentate ligands, the study of their coordination behavior towards d8 and d10 metal cations and their use in nickel-catalyzed ethylene oligomerization. The ligands of interest are of the P,N or diphosphine type built on a permethylated α-cyclodextrin unit. Metal encapsulation in the cyclodextrin cavity was shown to promote exclusive formation of 1 :1 ligand/metal chelate complexes at the expense of bis(phosphine) complexes. The presence of the metal inside the cyclodextrin cavity was revealed by 2D NMR characterization and radiocrystallographic studies. All nickel complexes were tested for the catalytic oligomerization of ethylene. It was found that the selectivity of the reaction, both in terms of chain length (C4) and regioselectivity (-olefin formation), and the robustness of the catalysts are significantly improved when the axial positions of the metal center are protected by the cavity wall.

  • Density (matrix) functional theory approach to quantum embedding for strongly correlated electrons

    Sajanthan Sekaran
    Chemical Physics [physics.chem-ph]. Université de Strasbourg, 2022. English. ⟨NNT : 2022STRAF018⟩ | Publiée le 16 septembre 2022
    Thèse

    The present thesis aims at developing and implementing novel and in-principle-exact embedding methodologies at the interface between chemistry and physics. Towards an accurate description of strongly correlated molecules and materials, the quantum embedding will be applied to the Hubbard model, and then generalized to Ab initio molecular Hamiltonian. We will verify if density matrix embedding theory (DMET) can be made formally exact and systematically improvable while preserving a single­particle quantum partitioning picture. More precisely, we will rewrite the embedding as a functional of the density matrix, thus bypassing the Schmidt decomposition of the reference ( correlated or not) full-system wave fonction. Then, we will clarify the connections between DMET and the in-principle-exact theories that are density functional theory (DFT) and reduced density matrix functional theory (RDMFT). On that basis, alternative flavors of DMET will be explored.

  • Design, synthesis and properties of receptors incorporating acridinium and porphyrin units

    Amy Edo-Osagie
    Other. Université de Strasbourg, 2022. English. ⟨NNT : 2022STRAF011⟩ | Publiée le 28 avril 2022
    Thèse

    The work of this thesis has focused on the design, synthesis and study of new receptors incorporating acridinium-porphyrin conjugates. The effects of pairing the two motifs on the electro- and photo-chemical properties of the molecules and on their recognition behaviour were explored. Two synthetic methodologies for coupling acridinium and porphyrin motifs were found allowing the synthesis of different meso-substituted acridinium-porphyrins. This was then extended into the synthesis of molecular receptors, using olefin metathesis as a means of covalently linking acridinium-porphyrin conjugates. Via this method, both a porphyrin-acridinium tweezer and cage were successfully synthesised. The binding abilities of the two receptors were investigated with respect to ditopic ligands (DABCO and 4,4’-bipyridine) and polyaromatic hydrocarbons. Furthermore, the presence/absence of cooperativity between the porphyrin and acridinium binding sites was investigated. Finally, the multi-switching behaviour based on different stimuli (chemical and/or redox) was studied and the remote-controlled tuning of the binding affinity for ditopic ligands evidenced.

  • Chiral organometallic concave compounds : luminescence and supramolecular properties

    Jing Zhang
    Coordination chemistry. Université de Strasbourg, 2021. English. ⟨NNT : 2021STRAF056⟩ | Publiée le 16 décembre 2021
    Thèse

    We explored two ways for new approaches of metallo-cryptophane design and synthesis to create receptorsendowed with original photophysical properties. In Part I, we synthesized alkynyl cyclotribenzylene (CTB)gold(I) complexes for evaluating their ability to form cryptophanes using aurophilic interactions. Theorganometallic CTBs were found to be luminescent in CHCl3 and able to host quaternary ammoniums like Et4N+.Studies of optically-active and racemic gold CTB complexes in MeOH/CHCl3 showed that they self-assembledstereoselectively into spherical nanoparticles at high MeOH content, the onset of nanoparticle formationdepending on the nature of the metal ligands. In Part , luminescent organoplatinum precryptophanes weresynthe-sized from a CTB containing an alkynyl and two carbonitrile substituents. They were unexpectedlyisolated as Cu(I) complexes. The conformations of the Cu-free precryptophanes were studied in differentsolvents and were shown to depend also on the relative configurations of the two CTBs. These experimentspaved the way for finding new strategies for the synthesis of organometallic cryptophanes.

  • Computational exploration of host-guest complexes

    Dylan Serillon
    Other. Université de Strasbourg, 2021. English. ⟨NNT : 2021STRAF048⟩ | Publiée le 10 décembre 2021
    Thèse

    Supramolecular chemistry has experienced enormous growth in recent years. Supramolecular processes and, in particular, host-guest interactions are studied for the variety of their potential applications (from industrial processes to medical field application). At the moment, breakthrough discoveries in molecular host-guest chemistry are hampered by the complexity of the thermodynamic and kinetic characterization of the inclusion/release processes, which make it difficult to generate useful predictions about molecular encapsulation.In this context, this thesis project focused on the development of a computational platform for binding free energy prediction of host-guest complexes using both thermodynamic-based and knowledge-based approaches. The aim is not only to improve the overall knowledge in the field of supramolecular chemistry but also to provide new opportunities and applications for existing containers and provide direction in their rational development.

  • Porphyrines étendues et hélicité

    Vincent Silber
    Chimie de coordination. Université de Strasbourg, 2021. Français. ⟨NNT : 2021STRAF049⟩ | Publiée le 3 décembre 2021
    Thèse

    L’objectif général de cette thèse a été la synthèse et la caractérisation de porphyrines dont la délocalisation électronique s’étend à travers un système hélicoïdal. Au sein d’une porphyrine, une cyclisation intramoléculaire conduit à la formation de deux atropisomères hélicoïdaux en échange rapide. Les barrières énergétiques d’inversion de ces hélices ont été étudiées en fonction de différents éléments structuraux. Certains énantiomères ont été séparés et malgré leurs propriétés chiroptiques, les temps de demi-vie mesurés en solution sont trop modestes pour rendre ces composés exploitables. D’autres approches visant à s’affranchir du phénomène de racémisation ont alors été développées. Une stratégie alternative consiste à établir une communication électronique entre une porphyrine et un hélicène, un fragment hélicoïdal connu pour sa stabilité conformationnelle. La première approche a consisté à fusionner les deux entités de façon covalente et a permis de former une première porphyrine hélicoïdale. Une deuxième approche est basée sur l’utilisation d’un ion métallique connecteur comme relais électronique entre la porphyrine et l’hélicène. Grâce à cette méthode, plusieurs complexes ont été préparés et caractérisés par diffraction des rayons X.

  • Novel materials based on polyoxotitanate clusters

    Yaokang Lu
    Other. Université de Strasbourg, 2021. English. ⟨NNT : 2021STRAF040⟩ | Publiée le 1 décembre 2021
    Thèse

    Polyoxotitanates (POT) containing well-defined ratios of Ti atoms and dopant metals and / or organic ligands are of great interest because they are potential precursors to form doped materials such as TiO2.In this work, twelve POT clusters were synthesized and characterized. Then a series of new materials were prepared on the basis of these original POTs. C@TiO2 composite materials have been used as electrode materials for Li-ion batteries or as supercapacitors. PEDOT materials: Ce@TiO2, PTEPA-Ti, Poly-(EDOT-POT-1) exhibit a strong hydrophobic surface and promising electrochromic properties. In particular, the nanoporous Poly-(EDOT-POT)-1 film, obtained from Ti6O6(TA)6(iPrO)6) (POT-1, TA = thiophene-3-acetate) is suitable for ion transport fast and has improved electrochromic properties compared to PEDOT.Finally, a copolymer based on porphyrin and POT-1 was obtained. Poly-(H2P-POT-1) film exhibits good generation behavior for photocurrent generation.

  • Accurate prediction of ligand-binding affinities in solution by molecular dynamics simulations

    Gilberto Pereira
    Other. Université de Strasbourg, 2021. English. ⟨NNT : 2021STRAF044⟩ | Publiée le 5 novembre 2021
    Thèse

    Computational methodologies are able to accelerate drug discovery campaigns and decrease the associated costs. From the methods available to compute binding affinities, the Molecular Mechanics/Generalized Born Surface Area (MM/GBSA) approach is a compromise between accuracy and efficiency. However, here entropic contributions are often neglected. In this thesis, we developed an automatic method named, Quasi-Harmonic Multi-Basin, to compute the ligand configurational entropy loss upon binding. Apart from achieving quantitative agreement with experimental gas-phase entropies ofsmall molecules, adding this correction to MM/GBSA estimates increased correlation toexperiments by 10%. The correction was included into a Virtual Screening (VS) campaignin Smooth Muscle Myosin II (SMM2). From the VS, 26 compounds were experimentallytested and eight showed activity at 190 Version mai 2021 4 / 4 μM. We thus have established a VS protocol toidentify inhibitors of complex allosteric proteins like myosin molecular motors.

  • Enamides and ynamides to generate molecular complexity

    Yongxiang Zheng
    Organic chemistry. Université de Strasbourg, 2021. English. ⟨NNT : 2021STRAF057⟩ | Publiée le 28 septembre 2021
    Thèse

    The work described in this thesis manuscript focused first on the development of a domino reaction from N-imides equipped enamidyl vinyl ketones. Secondly, the reactivity of ynamides towards diazo compounds was studied to access, on one hand, to difluorinated amido-furans and on the other hand to a new synthesis of N-allenamides.Tertiary enamides integrated into cross-conjugated dienones underwent a domino-reaction involving N-acyliminium ion trapping followed by a Nazarov cyclization. Psychoactiv substructures i.e diazepines fused with cyclopentenones were thus obtained with very good yields.A copper-catalyzed addition of difluorinated diazoacetone to ynamides made it possible to develop a new synthesis of difluorinated amidofurans highly valued in medicinal chemistry and phytochemistry. These compounds were then used as platforms to achieve the synthesis of more complex heterocycles.The particular reactivity of ynamides towards diazo compounds has enabled us to develop a new synthesis of terminal N-allenamides. By using judisciously functionnalized diazo compounds, we obtained push-pull N-allenamides substituted in position  by a CF3, CF2H or a CF3CF2 moiety.

  • Study of CuII-complexes for potential diagnostic and therapeutic applications in CuII-related diseases

    Enrico Falcone
    Other. Université de Strasbourg, 2021. English. ⟨NNT : 2021STRAF032⟩ | Publiée le 27 septembre 2021
    Thèse

    Cu dyshomeostasis, notably increased levels of the exchangeable Cu in serum and/or urine, have been correlated with pathologies such as Wilson’s and Alzheimer’s diseases and cancer. This thesis mostly focused on the design of reversible CuII-responsive luminescent probes having suited affinity and selectivity for CuII, as well as detectability, for the detection of exchangeable CuII in biological samples. After showing that the design of reversible turn-on probes is extremely challenging, we developed turn-off and ratiometric probes based on the CuII-binding Xxx-Zzz-His peptide motif and luminescent lanthanide complexes, which were able to detect CuII in biological media. Moreover, we investigated the ability of the putative Cu-based anticancer drugs thiosemicarbazones (TSCs) to bind CuII in the presence of human serum albumin (HSA) and then to generate ROS in the presence of glutathione (GSH) and O2 at different pHs. Our results suggest that (i) TCSs are able to pick up CuII from HSA, (ii) the ROS generation by CuII-TSCs in the presence of GSH and O2 correlates with their anticancer activity and (iii) the lower lysosomal pH might play a key role in their activity.

  • Étude en solution des interactions basées sur un trou-σ : conception, synthèse et applications de nouveaux donneurs de liaison halogène et chalcogène

    Robin Weiss
    Catalyse. Université de Strasbourg, 2021. Français. ⟨NNT : 2021STRAF008⟩ | Publiée le 7 mai 2021
    Thèse

    Ce travail de thèse s’articule autour de la synthèse de nouveaux donneurs de trous-σ, leur étude en solution ainsi que leur mise en application en organocatalyse.Dans un premier temps, l’aptitude des chalcogènes (soufre, sélénium et tellure) à former des interactions non covalentes basées sur un trou-σ a été étudiée en solution. Pour cela, une étude par chromatographie en phase liquide à haute performance sur phase stationnaire chirale avec des 4,4’-bipyridines soufrées et séléniées a été réalisée pour montrer la présence de liaison chalcogène stéréosélective en solution. De plus, une autre étude par spectroscopie de résonance magnétique nucléaire a été menée afin de mettre cette fois-ci en lumière la présence de liaisons chalcogène basées sur l’atome de tellure dans différents composés organotellurés.Enfin, à partir de leur étude en solution, les meilleurs donneurs de trou-σ ont été utilisés en organocatalyse dans diverses réactions (bromation, bromocyclisation, aza-Diels-Alder, Ritter) afin de démontrer leur efficacité en tant qu’organocatalyseur.

  • Chimie des systèmes protéiques complexes : étude des interactions entre des allergènes cutanés et respiratoires et des épidermes humains reconstitués par une nouvelle approche associant RMN HRMAS et spectrométrie de masse

    Minh Thuong Khong
    Chimie organique. Université de Strasbourg, 2021. Français. ⟨NNT : 2021STRAF011⟩ | Publiée le 14 janvier 2021
    Thèse

    L’allergie est une pathologie qui touche de nombreuses personnes dans le monde et devient un problème majeur de santé publique. La chimie joue un rôle prédominant dans l’étude des phénomènes qui conduisent à l’allergie de contact et l’allergie respiratoire. En effet, les allergènes cutanés et respiratoires de faible poids moléculaire (haptènes), incapables d'activer directement le système immunitaire, doivent se lier de manière covalente à des protéines endogènes pour former des structures immunogènes qui activent et différencient les lymphocytes T naïfs en Th1 ou Th2, respectivement. Ce travail propose d’utiliser la RMN HRMAS et l’analyse protéomique par spectrométrie de masse pour étudier l’interaction des allergènes cutanés et respiratoires vis-à-vis des épidermes humains reconstitués dans le but de comprendre la façon dont les allergènes interagissent avec les protéines épidermiques dans un environnement vivant complexe, et comment cela pourrait orienter différemment la réponse du système immunitaire.

  • Structural and functional investigations of designed histidine-rich peptides with potent antimicrobial, transfection, and lentiviral transduction activities

    Morane Lointier
    Other. Université de Strasbourg, 2020. English. ⟨NNT : 2020STRAF025⟩ | Publiée le 11 décembre 2020
    Thèse

    The LAH4 family is composed of cationic peptides derived from LAH4, all able to structure into amphipathic α-helix depending on the pH of the environment. They interact and disrupt membranes, are used for various biological applications: antimicrobial, transfection and transduction. The work of this thesis deals with the understanding of the relationship between the sequence similarity and the variety of biological activities. It was divided into three parts : first, the study of sequence modification effect on the two series "LAH4-An" and "LAH4-Ln" based on the hydrophilic angle change; then, the study of fibrillation conditions of LAH4-A4, LAH4-L1 and LAH4 to better understand their self-assemblies since fibril formation has been important for transduction. And finally, the determination of the fibrils structure of LAH4-A4 since it is essential to understand their mechanisms of action.

  • Hybrid polyoxometalate – porphyrin materials : photovoltaic devices and photocatalysis

    Yiming Liang
    Other. Université de Strasbourg, 2020. English. ⟨NNT : 2020STRAF022⟩ | Publiée le 1 décembre 2020
    Thèse

    The purpose of this thesis was to functionalize the meso position of a porphyrin with ligands using electropolymerization by covalent connection. Various dipyridyl ligands were introduced, leading to the formation of a carbon-nitrogen bond. Polyisoporphyrin and polyporphyrin can be obtained by using different upper potentials which is due to the formation of porphyrin radical cation and porphyrin dications. The two copolymers were also characterized by UV-Vis-NIR spectroscopy, X-ray Photoelectron Spectroscopy (XPS), electrochemistry, Electron Spin Resonance (ESR), Atomic Force Microscopy (AFM) and Electrochemical Impedance Spectroscopy (EIS). ESR spectroscopy confirmed the presence of the radical inside copolymer films. The optical spectra of polyisoporphyrins showed a splitting of Soret band and additional Near IR band which produce more efficient photocurrent response than polyporphyrins. The singlet oxygen. Excitation of this new NIR band for the isoporphyrin radical copolymer lead, in the aerated media (presence of O2), to the formation of the singlet state of the dioxygen 1O2 which is the first step for the use of such materials for the phototherapy cancer treatment.Moreover, the same conditions were used to introduce pyridyl decorated octahedral halide clusters and diphosphonium where the potential of oxidation is below the second second oxidation potential of the porphyrin. Good efficiency for the photocurrent generation under visible illumination were obtained. The photovoltaic performances depended on the number of iterative cycle used during the electropolymerization. Such results open a new route to form original copolymers with interesting new properties for photo(electro)catalysis.

  • Multi-porphyrines et interactions avec des polyoxométallates

    Raphaël Lamare
    Autre. Université de Strasbourg, 2020. Français. ⟨NNT : 2020STRAF021⟩ | Publiée le 26 novembre 2020
    Thèse

    Ce travail décrit l’étude de l’encapsulation de polyoxométallate (POM) au sein de dimères de porphyrines cationiques. Différentes voies de synthèse ont été étudiées pour l’accessibilité de ces dimères cationiques. Dans un premier temps, la formation des molécules a été entreprise par couplage pyridine /porphyrine induit par voie électrochimique. Cependant, les résultats ont montré qu’il est difficile d’utiliser des systèmes multi-porphyriniques en raison de la réactivité des cations radicalaires des porphyrines. Une approche chimique alternative a permis de générer des dimères cationiques par formation de liaisons N-C(benzylique) et cette stratégie peut être étendue à une grande variété d’espaceurs, de type xylyle ou imidazole. L’inclusion de POM dans des dimères de porphyrines en solution a été étudiée par fluorescence et a permis de mettre en évidence la formation d’assemblages polyoxométallate-porphyrines. Le suivi de cette formation en UV-visible et fluorescence suggère que les interactions entre le POM et la porphyrine sont majoritairement des interactions faibles (van der Waals et électrostatiques).

  • Assemblages supramoléculaires de porphyrines à anse phénanthroline

    Maxime Vonesch
    Chimie organique. Université de Strasbourg, 2020. Français. ⟨NNT : 2020STRAF019⟩ | Publiée le 19 novembre 2020
    Thèse

    Ce travail décrit la synthèse et l’étude de composés issus d’une porphyrine à anse phénanthroline. Deux projets tirent parti de l’accessibilité synthétique de cette porphyrine superstructurée rigide. Dans un premier temps, la porphyrine à anse est utilisée dans une réaction de CuAAC pour former un rotaxane par une stratégie de gabarit métallique actif. Les différents paramètres de cette réaction sont étudiés avant de s’attarder sur le déplacement de l’axe en réponse à divers stimuli. Par la suite un rotaxane alliant la porphyrine à anse phénanthroline à un C60 est étudié à l’état excité et fondamental. Dans un second temps, la porphyrine à anse phénanthroline est utilisé pour la synthèse de modèles d’hémoprotéines par assemblage avec des cavitands dans l’eau. Diverses porphyrines à anse anioniques et cationiques sont synthétisées et leurs interactions avec des cyclodextrines et des cucurbituriles sont étudiées par spectrophotométrie UV-visible et RMN.

  • De nouveaux inhibiteurs de l’enzyme IspD comme solution contre Bacillus anthracis

    Barbara Laborie
    Chimie organique. Université de Strasbourg, 2020. Français. ⟨NNT : 2020STRAF047⟩ | Publiée le 26 octobre 2020
    Thèse

    Les récentes épidémies (Zika, Ebola et Covid-19) ont montré notre vulnérabilité face aux maladies infectieuses. Dans ce contexte, l’emploi d’agents pathogènes (virus, bactéries et toxines) comme arme biologique est un fait inquiétant. L’un des agents les plus dangereux est la bactérie Bacillus anthracis qui est responsable de la maladie du charbon (anthrax). Des antibiotiques sont encore actifs sur ce microorganisme mais l'émergence de souches résistantes nécessite le développement d’antibiotiques avec de nouveaux modes d'actions. Les isoprénoïdes, essentiels à la survie de tous organismes vivants, sont synthétisés à partir de deux voies de biosynthèse : la voie du mévalonate (MVA) et la voie du méthylérythritol phosphate (MEP). Cette dernière voie, absente chez l’Homme, mais présente chez la plupart des bactéries constitue donc une cible pour le développement de nouveaux antibiotiques. Afin de développer des inhibiteurs d’IspD, la troisième enzyme de la voie du MEP, une approche par fragment a été développée. Un criblage par résonance plasmonique de surface (SPR) a permis d’identifier 23 fragments ayant une affinité pour IspD de Bacillus anthracis de l’ordre du micromolaire. Parmi ces fragments, 4 ont été sélectionnés à l’aide de différentes techniques telles que la RMN STD, le docking et les tests enzymatiques. Finalement, l’évolution de ces 4 fragments a conduit à la synthèse de 18 molécules dont le potentiel d’inhibition reste à déterminer.

  • Analysis of the molecular basis of herbicide resistance in plants

    Fatemeh Abdollahi
    Organic chemistry. Université de Strasbourg; University of Mohaghegh Ardabili (Ardabil, Iran), 2020. English. ⟨NNT : 2020STRAF012⟩ | Publiée le 16 septembre 2020
    Thèse

    Acquired weed resistance to herbicides is an increasing concern in modern agriculture. Herbicide metabolism by cytochrome P450 monooxygenases is a major source of resistance. In human liver, a few promiscuous P450s perform most of drug detoxification. Correlation of herbicide metabolism with plant P450 promiscuity was thus investigated. Majors classes of herbicides were tested for oxidation by six plant P450 enzymes with low to high promiscuity. The most promiscuous, CYP706A3 from Arabidopsis thaliana, was found to hydroxylate pendimethalin and most other dinitroanilines. CYP706A3-mediated metabolism led to herbicide resistance in Arabidopsis plants. Only oryzalin was not metabolized. Protein homology modelling and dinitroaniline docking in CYP706A3 active site support experimental results and suggest that absence of oryzalin conversion results from impaired access to active site. Dinitroaniline conversion was also observed with other CYP706 enzymes metabolizing small hydrophobic compounds.

  • Préparation et vieillissement de matières organiques en contexte archéologique : approche analytique et expérimentale

    Julien Perthuison
    Chimie analytique. Université de Strasbourg, 2020. Français. ⟨NNT : 2020STRAF006⟩ | Publiée le 7 mai 2020
    Thèse

    Cette thèse a été consacrée à la problématique de l’altération de substances organiques en contexte archéologique, avec pour objectifs de donner des clés analytiques et expérimentales pour étudier les processus mis en jeu, d’identifier de nouveaux outils moléculaires indicateurs des processus subis par les matériaux organiques archéologiques et d’interpréter l’impact de ces processus sur les signatures moléculaires de ces matériaux. Après la mise au point d’un protocole expérimental de vieillissement en laboratoire reproduisant les processus « naturels » de vieillissement de substances organiques archéologiques, nous avons déterminé que les réactions croisées entre ingrédients (esters d’acides gras, terpènes) conduit à la formation de composés oligo-/polymériques intéressants à étudier à l’aide de réactions de dégradation chimique. L’étude moléculaire de matériaux organiques archéologiques a aussi été abordée. Ainsi, de la résine de diptérocarpacées provenant de deux épaves asiatiques du XIIème siècle et du brai de bouleau utilisé pour réparer des céramiques néolithiques ont été identifiés. De nouveaux biomarqueurs triterpéniques d’altération issus de la dégradation anaérobie en milieu sédimentaire de triterpènes précurseurs (résine), et des biomarqueurs de traitement thermique intense (brai) ont été caractérisés.

  • Métallothionéines et biomolécules capables de chélater et/ou de réduire le Cu et leur impact sur l'activité rédox et sur la stabilité des complexes de Cu d’intérêt médicinal : étude de cas sur des complexes de Cu-peptide amyloïde ou sur des principes actifs à base de Cu

    Alice Santoro
    Medicinal Chemistry. Université de Strasbourg, 2019. English. ⟨NNT : 2019STRAF067⟩ | Publiée le 16 décembre 2019
    Thèse

    Defects in copper (Cu) homeostasis have been linked to Alzheimer’s disease (AD) and Cancer. In AD, Cu has been found to bind to Aβ-peptides in extracellular amyloid-plaques, likely impacting the production of reactive oxygen species (ROS). Increased Cu levels have also been implicated in tumor growth. This has led to the development of Cu-based drugs. Particularly, the use of pro-oxidant Cu-complexes appears to be a promising strategy in cancer. Contrarily, in AD, redox silencing chelators are warranted. In a biological environment, the kinetic/thermodynamic stability of a Cu-complex against physiological competitors, is a key aspect to consider. In particular, the role of Cu-binding and reducing biomolecules (including metallothioneins, gluathione and cystein) is of pivotal importance. Within this context, this thesis aims to investigate the impact of these molecules on the redox-activity and stability of medicinal Cu-complexes. The studies carried out show that these molecules are key players for the fate of a Cu-complex, as they could lead to reactions of dissociation or transmetallation, abolishing the Cu-dependent ROS production.

  • Elaboration d'hétérocycles complexes par ammoniumation catalysée à l'or(I)

    Romain Pertschi
    Catalyse. Université de Strasbourg, 2019. Français. ⟨NNT : 2019STRAF036⟩ | Publiée le 11 octobre 2019
    Thèse

    Les hétérocycles azotés ont toujours retenu l’attention des chimistes du fait de leurs potentielles activités biologiques mais également pour leurs grandes occurrences dans les produits naturels. De ce fait émerge la nécessité de développer de nouvelles méthodes de synthèse innovantes permettant un accès rapide et efficace à ces hétérocycles. C’est dans cette philosophie que s’inscrivent ces travaux de thèse dont l’objectif est le développement de nouvelles approches basées sur l’utilisation de réactions d’ammoniumation catalysées à l’or(I) afin d’induire des cascades réactionnelles donnant accès à une large variété d’hétérocycles azotés. Ainsi, un motif de base N-sulfonyl-2-(1-propargyl)azétidine a permis d’accéder à une large variété de dérivés pyrroliques et de tétrahydroazépines. L’extension du concept d’ammoniumation lors de l’utilisation des N-(2-alcynylaryl)sulfonyl azétidines a conduit à l’obtention de benzosultames. Un autre défi majeur de la chimie de synthèse moderne est l’obtention de molécules énantiopures. Pour répondre à cette problématique, de nouveaux complexes chiraux NHC platine(II) ont été synthétisés et évalués en tant que catalyseurs sur des réactions de cycloisomérisation.

  • Sustainable transformations of CO2 in methanol and new polymeric graphene nanocomposites

    Yuri Clemente Andrade Sokolovicz
    Catalysis. Université de Strasbourg; Universidade Federal do Rio Grande do Sul (Porto Alegre, Brésil), 2019. English. ⟨NNT : 2019STRAF035⟩ | Publiée le 27 septembre 2019
    Thèse

    In this thesis the transformation of CO2 into chemicals, fuels and materials was investigated. In the chapter I two new aluminum hydride complexes and two new (L)AlOCOH complexes were successfully tested as catalysts in the borane reduction of CO2 to produce formoxyborane and methoxyborane. In the chapter II very simple, cheap and stable acetate salts - sodium, potassium and tetrabutylammonium acetate (TBAAc) – were used for the first time for the reduction of CO2 into methoxyborane by the hydroboranes HBpin and BMS. In the chapter III PLLA functionalized with an imidazolium salt end-group (PLLA-IS) were synthetized by organometallic catalysis and their applications in the preparation of reduced graphene oxide-PLLA composites and in the biomaterials field were studied.

  • Synthèses et réactivités d’ynesulfonamides et d’ènesulfonamides tertiaires : vers la synthèse d’hétérocycles azotés

    Lucile Andna
    Chimie organique. Université de Strasbourg, 2019. Français. ⟨NNT : 2019STRAF034⟩ | Publiée le 27 septembre 2019
    Thèse

    Les travaux décrits dans ce manuscrit de thèse ont porté dans un premier temps sur le développement d’une méthode de spirocyclisation de céto-ynamides non activés. Dans un second temps, la réactivité de N-imides équipés d’ynamides a été étudiée et finalement une nouvelle méthode de synthèse permettant à la fois l’obtention d’ynamides et d’énamides a été mise au point.Les céto-ynamides substitués par un groupement non électroattracteur conduisent à la formation de spiro-énamides exocycliques par traitement avec du Triton B avec stéréocontrôle total au niveau de l’énamide. Au départ de céto-ynamides non substitués les spirocycles endocycliques sont favorisés dans la majorité des cas. La synthèse d’-hydroxylamides N-fonctionnalisés avec un énamide tertiaire a été mise au point. Ces synthons, de par leur bifonctionnalité, conduisent en présence de TMSOTf à la formation d’aza-hétérocycles de tailles variables, sous structure de psychotropes. L’addition de sulfonamides sur des bromoalcynes activés ou des alcynes vrais substitués par un groupement électroattracteur constitue une nouvelle méthode d’accès simple et efficace à des yne- et ènesulfonamides tertiaires substitués par un groupement électroattracteur parfois inaccessible autrement.

  • Iridium(III) silylene complexes : trapping, reactivity and applications

    Binh Dang Ho
    Inorganic chemistry. Université de Strasbourg, 2019. English. ⟨NNT : 2019STRAF030⟩ | Publiée le 25 septembre 2019
    Thèse

    The scope of this thesis spans the most recent advances in the investigation of chemical bonds of iridium-silicon complexes, in which a metal-bound silyl group behaves as a Z ligand that maintains a dative bond with the metal centre. This contrasts greatly with the case where this group behaves like an X ligand, that is where this silyl group binds to Ir through a covalent bond. Finally, and most interestingly are silylene ligands that in principle should establish a double bond with the Ir centre. The idea of evaluating and tuning the electrophilic character of the silyl moiety and adjuncts its “silylicity” was probed by experimental and theoretical means. To conduct that scheme, a broad range of metal–silane adducts and other metal–silyl complexes were investigated by the computation of metal–silyl interaction energies to outline the established tools that rationalize the bonding relationship that exists between the metal center and a SiR3 moiety. Also, this research revealed a clear separation between cases in which the Z character of the silyl moiety is the best description, and cases that belong to “classical” situations in which the X character dominates. Moreover, we postulated that for metal–silane adducts that possess a low intrinsic silylicity, a high “silylicity” can be triggered by ligand replacement or by changing in the charge of the complex.While working on this topic, we discovered that in the presence of tetrahydrofuran (THF), [(Ir-H)→SiRH2]+ adducts readily convert by H2 gas elimination at sub-ambient temperature into new THF-stabilized metallacyclic Ir(III)-"silylene" complexes. The emergence of metal silylene complexes via sequential H-Si activations followed by the spontaneous release of H2 featured in this thesis is unique. The primary goal of this thesis finally was to fully characterize those elusive complexes by NMR spectroscopy analyses and X-ray diffraction analysis. Furthermore, theoretical investigations (static DFT-D reaction-energy profiling, ETS-NOCV) and NMR kinetic studies were utilized to demonstrate the role of THF which facilitated H2 elimination. Coupled with silylene metal complex chemistry mentioned above, cationic iridacycle 1b is of interesting catalytic reactivity toward nitro arenes, which can perform the nitro reduction in arenes to give aniline type products.In crafting a new development of this chemistry, it is safe to hypothesize that cationic hydrido-Ir(III)-silylium species, whose catalytic reactivity is of significant correlation with the extend of polarization of the molecule can enhance in the key intermediates the molecule polarization, and therefore increase its catalytic reactivity. Such polarization that occurs already in the Ir-silane adduct stems from the electropositivity of Si centre. Keeping the main ligand backbone constant, introduction of a fluoro substituent can improve the polarization of the same molecule and by way of consequence increase its catalytic reactivity.As expected, F-1a also displays remarkable catalytic reactivity toward a benchmark test reaction that can be followed by piezometry, i.e. the O-dehydrosilylation of alcohols at room temperature with Et3SiH. A hydrido-Ir(III)-silylium intermediate crystal was trapped as well following on a reaction with Et2SiH. In conclusion, based on the discovery of hydrido-Ir(III)-silylium intermediates associated with a comprehensive study of their reactivity and catalytic performance, this thesis has taken steps to advance knowledge of Ir-silicon complexes by synthesis and the full structural characterization of notoriously elusive metal silylene complexes. Also, sophisticated computational methods have been employed to shed light on the mechanism of conversion of Ir-silane adducts into silylenes of which a great number were trapped by reactive recrystallization and subsequently characterized by X-ray diffraction analysis.

  • Synthèse et études de cages moléculaires commutables : récepteurs allostériques et composants de systèmes entrelacés

    Ryan Djemili
    Chimie de coordination. Université de Strasbourg, 2019. Français. ⟨NNT : 2019STRAF028⟩ | Publiée le 24 septembre 2019
    Thèse

    La synthèse de cages moléculaires commutables intégrant des fonctions permettant de contrôler la taille de leurs cavités représente un défi conceptuel et synthétique. La cage covalente flexible synthétisée C se compose de deux porphyrines de zinc(II) reliées par des anses diméthoxyéthane incluant des ligands triazoles. La coordination réversible d’ions Ag(I) aux triazoles déclenche un changement conformationnel important de la cage qui passe d’une conformation aplatie à une conformation ouverte. Ce changement conformationnel permet le contrôle allostérique de l’encapsulation de molécule π-accepteur (NDI) ou de ligand ditopique (pyrazine). Enfin, un [2]semirotaxane original, constitué de la cage ouverte [Ag4C](BArF)4 comme anneau, a été obtenu quantitativement par enfilage d’un axe moléculaire mono-bouchonné comportant une station pyrazine. La commutabilité de la cage est exploitée pour contrôler l’enfilage de l’axe au travers de l’anneau. C’est un exemple rare d’enfilage contrôlé de façon allostérique.

  • Cyclophanes de viologènes adressables pour stockage de charges

    Jimmy Richard
    Chimie organique. Université de Strasbourg, 2019. Français. ⟨NNT : 2019STRAF021⟩ | Publiée le 20 septembre 2019
    Thèse

    Le stockage de données sur une molécule est un défi fondamental dans l’élaboration de systèmes pouvant stocker une grande quantité de données dans un minimum d’espace. Le projet de cette thèse s’inscrit dans cette thématique, à savoir la conception d’interrupteurs moléculaire oscillant par des stimuli redox et étant lisibles sans altérer les différents états pour permettre la création de mémoire moléculaire. Les cyclophanes bis-viologènes sont donc des candidats potentiels pour la création de dispositifs de stockage d’informations qui pourraient être écrites de façon réversible et lues de nombreuses manières grâce aux propriétés magnétiques, optiques et conductrices des π-dimères. Le premier chapitre de cette thèse est consacré à une introduction sur la chimie des cyclophanes et sur l’utilisation des surfaces dans la chimie des cyclophanes et des interrupteurs moléculaires. Le second chapitre porte sur la synthèse de viologènes et de cyclophanes bis-viologènes. Le troisième chapitre est ensuite consacré à la synthèse de cyclophanes diazapyrénium-viologènes, alternatives possibles des cyclophanes bis-viologènes.

  • Les allergènes cutanés réagissant au travers de processus radicalaires : de la molécule au tissu

    Fatma Sahli
    Chimie organique. Université de Strasbourg, 2019. Français. ⟨NNT : 2019STRAF023⟩ | Publiée le 17 septembre 2019
    Thèse

    L’allergie cutanée représente un problème majeur de santé publique. La compréhension de tous les mécanismes conduisant à des réactions allergiques est capitale afin d’évaluer le potentiel de sensibilisation des molécules à risques. Les hydroperoxydes dérivés de l’autoxydation de terpènes utilisés dans les produits cosmétiques sont à l’origine de sensibilisations cutanées. L’objectif a été d’étudier l’intervention de mécanismes radicalaires dans la formation d’entités antigéniques de ces composés. Une approche intégrée de trois actions a été proposée : - "in chemico" : études de réactivité vis-à-vis des acides aminés afin d’établir un profil de réactivité complet suscitant des réactions radicalaires; - "in situ" : étude de la formation et comportement des intermédiaires radicalaires formés dans un modèle 3D d’épiderme humain reconstitué ; - "in cellulo" : étude de leur capacité à activer le système immunitaire inné, à savoir les cellules dendritiques dans leur contexte naturel kératinocytaire.

  • Polymerization catalysis for polyesters obtention with hydrophilic biodegradable characters

    Anaëlle Bolley
    Polymers. Université de Strasbourg, 2019. English. ⟨NNT : 2019STRAF015⟩ | Publiée le 4 septembre 2019
    Thèse

    Carbene adducts with Group 13 metal (aluminium, gallium and indium) and a new aluminium cation stabilized by alkyl groups, have allowed the ROP of lactide under mild and simple conditions. In a second step, amphiphilic copolymers were synthesized with poly(ethylene glycol) leading to the desired PEG-co-PLLA. Organometallic complexes have still put forward their advantages by the use of aluminium’s salen allowing to open the way on the ROP of the α-chloro-ε-caprolactone leading to the poly(α-chloro-ε-caprolactone). The formation of new copolymers, diblocks and stereocomplex has afforded to modulate the obtained homopolymer’s properties, confirmed by the use of the various physicochemical measurements effected on the latter. Finally, the partial post-functionalization according to the Williamson reaction followed by the hydrogenation reaction has led to the obtaining of hydrophilic polymers.

  • Development of new synthetic tools for the preparation of coumarins and thiocoumarins

    Olesia Zaitceva
    Organic chemistry. Université de Strasbourg, 2019. English. ⟨NNT : 2019STRAF014⟩ | Publiée le 20 juin 2019
    Thèse

    The first separation of coumarin was made in 1820, since then scientists extracted more than a thousand natural coumarins and came up with many ways to synthesize them. Coumarins have found application in pharmaceutics, medicine, optical chemistry and biochemistry. Thiocoumarins are poorly represented in the literature than coumarins, but find application in similar areas. Due to a wide range of applications of coumarins and great potential of thiocoumarins, we decided to search for effective methods for synthesizing these compounds. The main goal of our study relies on the development of new methods for preparing coumarin and thiocoumarin derivatives starting from acetylenic compounds. The work is divided into the development of two strategies: homogeneous catalysis with a platinum complex and parallel to heterogeneous catalysis with acidic zeolites. According to the results it was possible to reveal the conditions for the cyclization of O- and S- arylpropynoates to coumarins and thiocoumarins. Although it was shown that the Pt (II) complex (PyPhPtCl(MeCN)) acts to cyclize O-arylpropynoates into coumarins, zeolites (H-Y, H-USY) are effective acid catalysts for access not only to coumarins, but also to thiocoumarins.

  • Exploring synaptic transmission and regulation in ionotropic receptors by molecular dynamics simulations and computational electrophysiology

    Adrien Cerdan
    Theoretical and/or physical chemistry. Université de Strasbourg, 2019. English. ⟨NNT : 2019STRAF006⟩ | Publiée le 8 février 2019
    Thèse

    Signals within neurons are mostly transmitted through chemical synapses. Signal transduction arises from the binding of neurotransmitters to membrane receptors in order to open ion channels. The Glycine Receptor (GlyR) is an ionotropic receptor which is involved in several neurological disorders such as addiction, chronic pain, or hyperekplexia. Because of its implication in human diseases, it is interesting to design novel drugs targeting this receptor. We used Molecular Dynamics (MD) simulations and computational electrophysiology to probe the function of available GlyR structures. We showed that none of the experimental structures display the physiological behavior of the conductive state. Using MD simulations, we captured a novel conformation of the GlyR compatible with a conductive state and demonstrated the importance of lateral portals for ionic permeation. Lastly, we proposed an original protocol, named state-based pharmacology, to discover modulators of allosteric proteins.

  • Développement de réactions catalysées à l'or et au palladium : synthèse totale d'alcaloïdes de la famille du Rhazinilam

    Fatih Sirindil
    Chimie organique. Université de Strasbourg, 2019. Français. ⟨NNT : 2019STRAF001⟩ | Publiée le 18 janvier 2019
    Thèse

    Ce travail de thèse s’articule autour de la synthèse totale des alcaloïdes de la famille Rhazinilam, potentiels agents anticancéreux. Dans ce contexte, deux méthodologies clés ont été développées. Premièrement, une réaction de cyclisation-migration de groupements sulfonyles catalysée à l'or (I) conduisant à des sulfonates de pyrroles a été optimisée et le champ d'application a été largement étendu. En tirant profit de la carbophilie des catalyseurs d’or (I), une réaction en cascade comprenant une séquence de cyclisation-migration-hydrocarbonation a été mise en place, permettant la synthèse d’indolizines ou de pyrroloazépines dans un procédé en un seul pot. Deuxièmement, des conditions réactionnelles sans précèdent par catalyse au palladium ont été développées pour le couplage de Suzuki-Miyaura impliquant des substrats de types sulfonates de pyrroles. Ces conditions ont été appliquées de façon efficace sur divers types de partenaires (aryle, hétéroaryle, vinyle sulfonates ou analogues halogénés) mais également utilisées dans différents types de couplages (Sonogashira, Buchwald). Ces méthodologies ont ensuite été appliquées à la synthèse totale du Rhazinilam et permis d’ouvrir la voie à la synthèse des Kopsiyunnanines et du Leuconolam. En parallèle, de nouveaux complexes associant des polyoxométallates et des carbènes d'or (I) ont été synthétisés, caractérisés et utilisés en catalyse hétérogène.

  • Experimental and theoretical approaches coupled with thermochemistry of reactions in solution and the role of non-covalent interactions

    Milan Milovanovic
    Theoretical and/or physical chemistry. Université de Strasbourg, 2018. English. ⟨NNT : 2018STRAF049⟩ | Publiée le 28 septembre 2018
    Thèse

    This manuscript adressed several important chemical interactions/reactions taking place in solutuon by using Isothermal Titration Calorimetry (ITC) and static Density Functional Theory (DFT). Namely, this thesis dealt with: association of (frustrated) Lewis pairs ((F)LPs), cis-migration of methyl group within pentamethylmanganese induced by phosphines, aminolysis of Fischer carbenes, insertion of alkynes into palladacycles, affinity of various Lewis donors to hexafluoroisopropanol. The ITC proved to be powerful experimental technique for obteining reliable thermochemical data of sutudied systems. The static DFT-D calculations showed capability for proper estiamtion of thermodynamic reaction parameters when an influence of solvation is not sighnificant. Otherwise, when the influence of solvent is not innocent, the calculations moslty failed to reproduce the experimantal results. In addition, Both the experimantal and therortical results revield existance of larger molecular clusters in solution of FLPs emphasising a role of non-covalent interactions.

  • Spirocyclisation de céto-sulfonylynamides : vers la synthèse d'azacycles fonctionnalisés

    Frédéric Beltran
    Chimie organique. Université de Strasbourg, 2018. Français. ⟨NNT : 2018STRAF014⟩ | Publiée le 28 septembre 2018
    Thèse

    Les travaux décrits dans ce manuscrit de thèse ont porté d'une part sur le développement de nouvelles méthodes de spirocyclisation de céto-ynamides et d'autre part sur la réactivité de spiroénamides tertiaires. Les céto-sulfonamides en présence de bromoalcynes et de carbonate de césium conduisent à la formation de spiro-énamides par réaction de spirocyclisation via un intermédiaire céto-ynamide activé. Une grande variété de cycloalcanones et de bromoalcynes électroattracteurs sont tolérés.Les céto-ynamides conduisent à la formation de dérivés spiro-énamides par traitement avec du Triton B. La spirocyclisation tolère de nombreuses cycloalcanones et différents substituants aryles sur l'ynamide, et opère avec un bon stéréocontrôle de l'énamide. Une version en milieu micellaire aqueux de cette spirocyclisation a également été développée. Deux réactions dominos assistées par l'énamide tertiaire spirocyclique ont ensuite été développées. En présence de tétrachlorure de zirconium, la réaction domino permet d'obtenir des tétracycles de façon diastéréosélective tandis qu'avec le tétrachlorure de titane des pentacycles sont obtenus à partir du spiro-énamide avec un excellent régio- et diastéréocontrôle.

  • Development of new embedding techniques for strongly correlated electrons : from in-principle-exact formulations to practical approximations.

    Bruno Senjean
    Theoretical and/or physical chemistry. Université de Strasbourg, 2018. English. ⟨NNT : 2018STRAF035⟩ | Publiée le 24 septembre 2018
    Thèse

    The thesis deals with the development and implementation of new methods for the description of strong electron correlation effects in molecules and solids. After introducing the state of the art in quantum chemistry and in condensed matter physics, a new hybrid method so-called ``site-occupation embedding theory'' (SOET) is presented and is based on the merging of wavefunction theory and density functional theory (DFT). Different formulations of this theory are described and applied to the one-dimensional Hubbard model. In addition, a novel ensemble density functional theory approach has been derived to extract the fundamental gap exactly. In the latter approach, the infamous derivative discontinuity is reformulated as a derivative of a weight-dependent exchange-correlation functional. Finally, a quantum chemical extension of SOET is proposed and based on a seniority-zero wavefunction, completed by a functional of the density matrix and expressed in the natural orbital basis.

  • Biophysical investigations of the LAH4 family peptides : enhancer of gene delivery, from peptide-peptide interactions to peptide-membrane interactions

    Justine Wolf
    Biological Physics [physics.bio-ph]. Université de Strasbourg, 2018. English. ⟨NNT : 2018STRAF037⟩ | Publiée le 20 septembre 2018
    Thèse

    The LAH4 family consists of cationic amphiphilic peptides with propensity to fold in α-helical secondary structures. They contain histidines allowing the modulation of their interactions in a pH dependent manner in the physiological range. In membranes, at neutral or acidic pH the peptide assumes a transmembrane or an in planar configuration, respectively.In the field of gene delivery systems, peptides like LAH4 are used. They are able to firstly interact with different cargoes in order to form stable complexes, then interact with the cell membrane, and finally, promote to escape from the endosome.This PhD has been divided into three parts in order to characterize, with biophysical methods, the interactions occurring during the delivery of these gene systems: peptide-peptide interactions with a focus on the study of VF1 fibre formation; peptide-membrane interactions: with the investigation of the effect of LAH4L1 in different membranes; and peptide-DNA interactions, where the interactions of LAH4L1 with a small DNA fragment were measured.

  • Etats excités en théorie de la fonctionnelle de la densité pour les ensembles : du modèle de Hubbard à l’hamiltonien exact avec séparation de portée

    Killian Deur
    Chimie théorique et/ou physique. Université de Strasbourg, 2018. Français. ⟨NNT : 2018STRAF021⟩ | Publiée le 19 septembre 2018
    Thèse

    Les travaux présentés dans ce manuscrit de thèse peuvent être divisés en deux parties. Dans une première partie, nous nous sommes intéressé à une extension multiconfigurationnelle de la théorie de la fonctionnelle de la densité (DFT) par l'intermédiaire d'une séparation de portée permettant un traitement hybride entre DFT et fonction d'onde multiconfigurationnelle « state-averaged ». Ainsi, nous récupérons en même temps la corrélation dynamique et la corrélation statique. De plus, cette étude est réalisée en considérant la DFT pour les ensembles afin de considérer une alternative à la méthode usuelle utilisée (DFT dépendante du temps) pour la détermination des états excités d'une molécule, évitant ainsi certains problèmes théoriques rencontrés avec cette approche. En particulier, les intersections coniques entre états excités nous intéressent particulièrement car il s'agit de cas pour lesquels une approche multiconfigurationnelle est primordiale. Dans une seconde partie, le développement de nouvelles fonctionnelles est réalisé sur le dimère de Hubbard asymétrique afin de tester de nouvelles approximations et d'étudier plus en détail les processus auto-cohérents. De plus, des couplages non-adiabatiques sont calculés en utilisant des énergies déterminées dans le cadre de la DFT pour les ensembles ayant la particularité de ne pas être dépendant du temps.

  • Towards the synthesis of nanostructures built from porphyrins

    Mary-Ambre Carvalho
    Génie chimique. Université de Strasbourg, 2018. Français. ⟨NNT : 2018STRAF015⟩ | Publiée le 14 septembre 2018
    Thèse

    Des assemblages linéaires de porphyrines reliées par des cations métalliques ont été obtenus en solution et visualisés à l’interface HOPG-solvant par STM. Afin de contrôler la taille des assemblages synthétisés en solution, une stratégie par différenciation de la réactivité des deux sites de coordination externes des porphyrines a été exploitée. De fortes interactions électroniques ont été mises en évidence entre les sous-unités des assemblages multi-porphyriniques. Atteignant la limite de solubilité et de caractérisation en solution avec les molécules comportant six porphyrines, une seconde stratégie a été développée, afin de synthétiser les oligomères à l’interface HOPG-phényloctane. L’auto-assemblage de monomères de porphyrines possédant deux sites de coordination externes a été étudié par STM. Après ajout de l’ion connecteur, des nanorubans comportant plusieurs dizaines de porphyrines reliées par des cations métalliques ont été observés par STM à l’interface HOPG-solvant.

  • Ligands build on macrocyclic platforms : can the macro cyclic unit influence the catalytic properties ?

    Nallusamy Natarajan
    Chemical engineering. Université de Strasbourg, 2018. English. ⟨NNT : 2018STRAF052⟩ | Publiée le 14 septembre 2018
    Thèse

    This thesis describes the synthesis of a series of compounds built on conical resorcin[4]arene and calix[4]arene platforms: a) diphosphites derived from optically active binol, in which the phosphite moieties have been grafted to the wider rim of the generic cones. These ligands were assessed in asymmetric hydroformylation of vinyl arenes and led to high iso selectivity with good to excellent enantiomeric excess; b) N-heterocyclic carbenes bearing either one or two cavitand moieties and their use for the synthesis of [NiXCpL] complexes (X = Br or Cl, Cp = cyclopentadienyl, LH = NHC) in which the NiCp moiety has been supramolecularly trapped in a resorcinarene bowl. These complexes were found active in ethylene dimerization; c) bulky triazolium salts with one or two resorcinarene substituents that were found suitable for the synthesis of complexes with abnormal NHCs. The latter were tested in palladium-catalysed Suzuki-Miyaura cross-coupling of bulky aryl chlorides with sterically hindered aryl boronic acids. Better activities were observed with the sterically less hindered triazolium salt, which bears a single resorcinarene substituent. Its higher efficiency arises from a higher substrate accessibility in the resulting catalytic intermediates as well as the presence of flexible pentyl groups that may interact with the metal centre so as to facilitate the reductive elimination step.

  • Synthèse de dérivés de la Névirapine substitués au carbone 13 pour l’étude de l’activation métabolique de cet antirétroviral dans des épidermes humains reconstruits

    Marion Greco
    Chimie organique. Université de Strasbourg, 2018. Français. ⟨NNT : 2018STRAF009⟩ | Publiée le 24 mai 2018
    Thèse

    Les toxidermies médicamenteuses sont des réactions de toxicité cutanée déclenchées par la prise d’un ou de plusieurs médicament(s). Dans les cas les plus graves, ces effets indésirables médicamenteux menacent la vie des patients. La plupart des toxidermies ne seraient pas déclenchées par la substance médicamenteuse elle-même, mais par un ou plusieurs de ses métabolites cutanés suffisamment réactif(s) pour former un complexe antigénique avec les protéines épidermiques. Cette étape-clé serait le point de départ des mécanismes immunitaires à l’origine des toxidermies. L’objectif de ce travail de thèse a été d’étudier l’activation métabolique in situ de la Névirapine, un antirétroviral à l’origine de toxidermies chez 20% des patients. En utilisant une technique non invasive, la RMN HRMAS associée aux épidermes humains reconstruits, il a été possible de suivre l’éventuelle bioactivation épidermique de la Névirapine et de ses dérivés ainsi que la fixation de l’un d’eux dans l’épiderme.

  • Alternative mechanisms in skin allergy processes : contribution of radical reactions from the molecule to the tissue

    Salen Kuresepi
    Organic chemistry. Université de Strasbourg, 2018. English. ⟨NNT : 2018STRAF010⟩ | Publiée le 11 mai 2018
    Thèse

    Allergic contact dermatitis is a pathology affecting 15 to 20% of the Western population. Until now no treatment exists, the prevention is the eviction of allergens. In the past, tests concerning new molecules for the market were tested on animals until the prohibition in the 7th amendment of the European directive concerning the cosmetics industry. In this context it is essential to develop alternative methods to assess the allergenic potential of chemicals.This manuscript proposes to analyze the problem of the allergic contact dermatitis from the molecule to the tissue for allergens reacting through radical mechanisms:In chemico: study of the reactivity profile of allylic hydroperoxides toward amino acids by NMRIn situ: radical intermediates formation on reconstructed human epidermis from allylic hydroperoxides by EPR In cellulo: study of the oxidative stress from allylic hydroperoxides on dendritic cells trough the Keap1/Nrf2/ARE sensor pathway.

  • Photosensibilisateurs porphyriniques pour la PDT par excitation mono- et bi-photonique et pour la théranostique

    Sébastien Jenni
    Autre. Université de Strasbourg, 2018. Français. ⟨NNT : 2018STRAF005⟩ | Publiée le 12 avril 2018
    Thèse

    L’objectif de cette thèse a été de synthétiser, caractériser et évaluer l’efficacité de photosensibilisateurs (PS) activables par excitation mono- et bi-photonique pour la thérapie photodynamique (PDT). Les PSs sont des dérivés de porphyrines qui ont été associés à différents composés incluants des sondes d’imagerie, des vecteurs, ou des nanoparticules, dans le but d’améliorer l’efficacité du traitement. Un PS a ainsi été relié à deux complexes de Gd(III) pour former un agent moléculaire théranostique afin de pouvoir suivre l’évolution de la PDT par imagerie par résonance magnétique (IRM). Cet agent théranostique conserve les bonnes propriétés photophysiques du PS et sa relaxivité remarquable permet l’imagerie à des concentrations plus faibles que les agents de contraste commerciaux. L’association d’un PS avec un vecteur, l’acide folique ou la biotine, a permis d’augmenter la sélectivité envers les cellules cancéreuses. L’augmentation de la phototoxicité envers des cellules HeLa pour ces deux PSs par rapport au PS non vectorisé montre le potentiel de ces deux PSs vectorisés pour la PDT par excitation mono et bi-photonique. Enfin, plusieurs PS ont été liés ou incorporés dans des cubosomes pour améliorer leur biodistribution et leurs phototoxicités ont été étudiées. Ces études montrent pour la première fois la possibilité d’utiliser des cubosomes comme formulation pour les PSs.

  • Synthèse et étude de la réactivité de cages moléculaires commutables

    Laëtitia Schoepff
    Génie chimique. Université de Strasbourg, 2018. Français. ⟨NNT : 2018STRAF003⟩ | Publiée le 26 janvier 2018
    Thèse

    Ce travail décrit la synthèse, les propriétés et la réactivité de cages moléculaires covalentes composées de deux porphyrines, synthétisées avec succès par effet template du DABCO, par CuAAC introduisant des sites périphériques triazoles permettant de contrôler la taille de la cavité grâce à différents stimuli chimiques. Ces cages se composent de porphyrines base libre ou métallées au zinc(II), à l’aluminium(III) ou au cobalt(III). La coordination réversible d’ions Ag(I) ou Cu(I) aux triazoles des cages moléculaires permet de passer d’une conformation aplatie à une conformation ouverte. La protonation des sites basiques permet l’ouverture maximale de la cage. Concernant leur réactivité, les cages aux porphyrines d’Al(III) permettent de catalyser la méthanolyse d’un triester de phosphate. Les cages aux porphyrines de Co(III) catalysent la synthèse de carbonates cycliques à partir d’époxyde et de CO2, sans formation de polycarbonates et avec une conversion totale en présence de pyridine comme co-catalyseur. Les cages bis-porphyriniques ont démontré dans ces réactions, une activité catalytique supérieure à celle des métalloporphyrines de référence.

  • Investigation of the hydrogen electrode reactions on Ni electrocatalysts in alkaline medium

    Alexandr Oshchepkov
    Theoretical and/or physical chemistry. Université de Strasbourg; Boreskov Institute of Catalysis, 2017. English. ⟨NNT : 2017STRAF071⟩ | Publiée le 22 novembre 2017
    Thèse

    The present thesis is mainly focused on the influence of the surface state of Ni electrodes on the kinetics and the mechanism of the hydrogen oxidation/evolution reactions (HOR/HER) in alkaline medium. By combining the results of electrochemical measurements with microkinetic modeling, it was shown that specific activity of Ni in the HOR/HER increases up to 10 times if along with metallic Ni, Ni oxide species are present on the electrode surface. In addition, the effect of the addition of a second metal to Ni electrocatalysts on their activity in the HOR/HER was investigated for NiMo/C and NiCu/C systems. In both cases an enhancement of specific activity was observed in comparison with the reference Ni/C sample, which was assigned to a decrease of the adsorption energy of the hydrogen intermediate on Ni participating in the HOR/HER.

  • Synthesis and reactivity of metal complexes bearing functional N-heterocyclic carbene ligands

    Xiaoyu Ren
    Other. Université de Strasbourg, 2017. English. ⟨NNT : 2017STRAF081⟩ | Publiée le 17 novembre 2017
    Thèse

    Potentially bidentate hybrid ligands (containing a NHC donor associated with an ether or an amine) and tridentate NCN pincer-type ligands (containing a central NHC donor flancked by two chemically-different nitrogen donors (Nimine and Namine)) have been prepared and used for coordination to transition metals, such as Ni, Cr, Cu, Ir. The influence of the length of the alkyl chain, -(CH2)2- or -(CH2)3- connecting the ether or the amine group to the heterocycle NHC was examined. In order to have access to the transition metal complexes, several methodologies were adopted: a) deprotonation of the corresponding imidazolium salts followed by addition of transition metal precursors; b) transmetalation from NHC silver complexes; c) oxidative-addition reaction of Ni(0) with imidazolium salts or the corresponding protonated salts. A series of Ni(II), Cr(III) complexes were tested in the catalytic ethylene oligomerization reaction.

  • Electrocatalytic reduction of NOx on metal nanoparticles stabilized by polyoxometalates

    Shu Yang
    Other. Université de Strasbourg, 2017. English. ⟨NNT : 2017STRAF056⟩ | Publiée le 10 novembre 2017
    Thèse

    The object of this work is to develop new catalysts to reduce nitrite ions (NO2- / HNO2) and nitrate ions(NO3-) in water and also tried to understand the factors that will influence catalytic reductions. It has been shown that the presence of polyoxometalates makes it possible to improve the catalytic properties of the Cu and Ag bulk electrodes for the reduction of nitrate and nitrite ions under suitable conditions. Then, the copper or silver nanoparticles decorated with POMs, Cu@POM or Ag@POM), are formed with two different methods: electroreduction in situ of CuPOM or photocatalysis in the presence of POM and Ag(I) ions respectively). Their electrocatalytic properties are presented. Six different Cusubstituted polyoxometalates (CuPOMs) are active for nitrite reduction at pH 1 and pH 5. Two activities are observed at the potential of CuII reduction and at the potential of WVI reduction in POM. [Cu4(H2O)2(P2W15O56)2]16- and [(A-β-SiW9O34)Cu4(OH)3(H2O)(H3N(CH2)3COO)2]3 5- catalyse the nitrate reduction at the potential beyond the reduction of CuII and at the reduction of WVI. On the other hand, no catalysis efficiency was observed with [(SbW9O33)2{Cu(H2O)}3]12-. This indicates the type of POM will influence the catalytic properties of nanoparticles. With the photoreduced Ag@POM nanoparticles, a heterogeneous catalyst is prepared and stabilized by a Nafion layer. Ag@POM nanoparticles are active for the reduction of nitrite and nitrate and have an activity better than the Ag electrode alone. In the last part, a preliminary study of polyoxometalates encapsulated in Metal-Organic Framworks (MOFs) is presented. POM retains its electrochemical and electrocatalytic properties toward the reduction of nitrite after immobilized in the cage of MOF.

  • Synthèse d’oligomères de porphyrines reliées par liaison de coordination et études de leurs propriétés physico-­chimiques

    Hervé Dekkiche
    Autre. Université de Strasbourg, 2017. Français. ⟨NNT : 2017STRAF034⟩ | Publiée le 27 octobre 2017
    Thèse

    L’objectif de cette thèse a été de synthétiser et de caractériser des assemblages linéaires de porphyrines reliées par des ions métalliques. Par réaction de porphyrines possédant un site de coordination externe avec des ions platine(II), des nouveaux homodimères et de nouvelles dyades ont pu être obtenus. Les mesures photochimiques et électrochimiques de ces composés ont alors permis de mettre en évidence un accroissement des interactions électroniques entre les sous-unités par rapport aux systèmes reliés par du palladium(II). Des transferts d’énergie ultra-rapides ont notamment été mis en évidence. Une série de monomères de porphyrines métallées en périphérie avec du palladium(II) ou du platine(II) ont ensuite été préparées. Pour ces molécules, les propriétés électroniques varient très peu en modifiant le complexe porté par la porphyrine. Des assemblages incorporant une unité porphyrinique difonctionnalisée ont ensuite été développés. La méthodologie utilisée a permis d’accéder à des trimères et des tétramères en solution comportant des porphyrines de nickel(II) ou de palladium(II). L’étude physico-chimique de ces composés a montré que les porphyrines interagissaient peu à travers les ions métalliques connecteurs. Enfin,des porphyrines difonctionnalisées comportant de longues chaînes alkyles ont été préparées. Comme cela a été vu grâce à la STM, certaines de ces molécules peuvent s’auto-assembler sur surface de graphite (HOPG) et ont permis de former des oligomères en présence d’ions métalliques

  • Synthèse de 14B-hydroxyandrostanes et de systèmes (poly)hétérocycliques au départ d'oléfines activées reliées à des cycloalcanones et à des hétérocycles azotés

    Clovis Peter
    Chimie organique. Université de Strasbourg, 2017. Français. ⟨NNT : 2017STRAF024⟩ | Publiée le 13 octobre 2017
    Thèse

    Nos travaux ont débuté par la synthèse diastéréo/énantiosélective de 14 béta-hydroxyandrostanes en faisant appel à une réaction de Diels-Alder visant la formation du cycle B. Nous avons ainsi préparé une large palette de 14 béta-hydroxyandrostanes naturels, non naturels, racémiques ou énantiopurs. Par exemple au départ de la 2-méthyl-cyclopentane-1,3-dione divers 14 béta-hydroxyandrostanes polyfonctionnalisés possédant 5 à 7 centres stéréogéniques ont été synthétisés. D’autre part, avec la (R) ou (S)-carvone comme diénophile, nous avons mis en évidence diverses réactions de Diels-Alder sous contrôle d’une résolution cinétique parallèle chemodivergente ce qui a donné accès à des 14 béta-hydroxyandrostanes et à leurs énantiomères optiquement purs. Par la suite, nous avons développé la synthèse diastéréospécifique de 1,3-oxazines racémiques ou énantiomériquement pures en traitant des alpha-alkyloxyamides polyfonctionnalisés par des acides de Lewis ou de Brønsted. Au départ de ces mêmes composés, nous avons également synthétisé des pyrrolizidinones et des indolizidinones polyfonctionnalisées en faisant varier la nature des acides de Brønsted. Une synthèse formelle de la (+/-)-tashiromine a ainsi été réalisée. Finalement, la dernière partie de nos travaux a été consacrée à l’obtention des systèmes tricycliques caractéristiques de la famille des cédranoides et de la famille des quadranes/subérosanes. Ces deux systèmes tricycliques ont été obtenus au départ de la cyclopentane-1,3-dione en utilisant comme étape clé une réaction de Morita-Baylis-Hillman intramoléculaire initiée par de la tri-n-butylphosphine.

  • Synthèse de bisubstrats et biligands pour la conception d’inhibiteurs inédits de la désoxyxylulose phosphate réducto-isomérase (DXR) : nouveaux antimicrobiens

    Aurore Dreneau
    Autre. Université de Strasbourg, 2017. Français. ⟨NNT : 2017STRAF037⟩ | Publiée le 7 septembre 2017
    Thèse

    Le développement de nouveaux antimicrobiens devient une nécessité suite à l’augmentation de souches résistantes. Les isoprénoïdes sont une cible, car ils jouent un rôle important dans le maintien des fonctions propres à chaque organisme vivant. Ils dérivent de deux précurseurs : IPP et DMAPP, synthétisés via la voie du MVA ou du MEP. Cette dernière n’étant pas présente chez l’homme mais chez de nombreuses bactéries pathogènes, toutes les enzymes de cette voie peuvent être des cibles intéressantes et notamment la désoxyxylulose phosphate réductoisomérase (DXR). Les bactéries devenant résistantes à la fosmidomycine, un inhibiteur naturel efficace de la DXR, nous avons synthétisé des analogues de cet antibiotique, fonctionnalisés judicieusement pour cibler le site du NADPH ou une poche allostérique et le site du DXP (substrat naturel). En ciblant ces deux sites, nous devrions améliorer l’affinité et l’efficacité des inhibiteurs. Les approches biligand et bisubtrat, ont été mises en œuvre. Les composés ont montré des résultats intéressants avec des IC50 dans le bas micromolaire. Un inhibiteur en particulier a montré des résultats comparables à la fosmidomycine avec un IC50 de l’ordre du nanomolaire.

  • Simulation de la formation de films polymères par séchage de colloïdes aqueux

    Mohammad Nassar
    Chimie-Physique [physics.chem-ph]. Université de Strasbourg, 2017. Français. ⟨NNT : 2017STRAE005⟩ | Publiée le 8 juin 2017
    Thèse

    Le séchage des dispersions colloïdales a été et demeure très étudié en raison de son extrême complexité et de son utilisation dans de nombreuses applications. Dans cette thèse, nous avons développé une simulation, d'abord unidirectionnelle, basée sur le principe des automates cellulaires, qui traite la problématique du séchage horizontal et vertical. Ce travail permet de prédire, par calcul numérique, la distribution des particules et la position des fronts de séchage dans les dépôts de dispersions sous forme de films minces. Nos résultats ont montré que la pression existant dans le fluide est la somme des pressions de Laplace et hydrostatique. Par rapport aux modèles existants, cela modifie la convection des particules dans la partie fluide de la dispersion. La diffusion collective des particules chargées a été étudiée également. Contrairement aux prédictions théoriques antérieures, nous avons pu montrer que la diffusion collective des particules chargées pouvait jouer un rôle majeur, y compris dans le cadre de l’approximation de lubrification. Finalement, la simulation 1D a été étendue en 2D, ce qui a permis de comprendre la raison pour laquelle deux fronts dans deux directions perpendiculaire (cas d’une géométrie rectangulaire) avancent à des vitesses différentes. Une comparaison entre les données expérimentales et le calcul numérique sur le profil du film et la vitesse des fronts de séchage pour une dispersion de silice montre un bon accord.

  • Edifices porphyrine-diaryléthène : synthèses et propriétés

    Thomas Biellmann
    Autre. Université de Strasbourg, 2017. Français. ⟨NNT : 2017STRAF021⟩ | Publiée le 19 mai 2017
    Thèse

    Visant des applications en électronique moléculaire, de nouveaux édifices moléculaires combinant quatre dithiényléthènes (DTEs) et une porphyrine ont été synthétisés par de nouvelles voies de synthèse. Les études en solution par photochimie ou spectroélectrochimie des édifices tetraDTEs-porphyrine métallée ou base livre ont montré l’efficacité (62-88 pourcent) des photochromes en tant qu’interrupteurs et la possibilité de lire l’état des DTEs par la fluorescence de la porphyrine. Pour mieux comprendre les interactions électroniques DTEs- porphyrines, des édifices plus simples, bis(porphyrine)DTE, déjà partiellement étudiés dans la littérature, ont été explorés. L’ensemble de ces études à mis en évidence l’impact des métaux sur la capacité photochromique des édifices dithiényléthène – porphyrine.

  • Or et azacycles : vers la synthèse totale de molécules naturelles

    Solène Miaskiewicz
    Autre. Université de Strasbourg, 2017. Français. ⟨NNT : 2017STRAF006⟩ | Publiée le 3 février 2017
    Thèse

    La Nature est une source quasi inépuisable de molécules possédant des propriétés biologiques souvent remarquables. Ainsi, les plantes fournissent chaque jour de nouvelles structures dont les chimistes s’inspirent afin de créer de façon synthétique des molécules similaires ou dérivées pouvant avoir de potentielles applications en tant qu’agents thérapeutiques par exemple.L’émergence de la catalyse organométallique a permis d’améliorer considérablement les méthodes de synthèse de molécules complexes. La catalyse homogène à l’or, dont le potentiel n’a été exploité qu’à partir des années 2000, a prouvé son efficacité pour effectuer de nombreuses réactions permettant de créer plusieurs liaisons carbone-carbone ou carbone-hétéroatome en une étape. Les conditions douces et la grande tolérance des catalyseurs d’or vis-à-vis de groupements fonctionnels divers ont naturellement mené à l’application de la catalyse à l’or à la synthèse de produits naturels. Ces études s’inscrivent dans cette dynamique et exploitent la réactivité d’azacycles contraints et d’alcynes en présence d’or(I) pour former des squelettes hétérocycliques couramment rencontrés au sein de produits naturels. La réactivité particulière des groupements sulfonyles protecteurs de l’azote a également été étudiée pour synthétiser différentes molécules azabicycliques. Les méthodes de synthèse mises au point ont finalement été appliquées à la synthèse de molécules cibles.

  • Study and applications of the H-Si bond activation of silanes by iridacycles : a contribution to the design of multicompetent catalysts

    Mustapha Hamdaoui
    Other. Université de Strasbourg, 2017. English. ⟨NNT : 2017STRAF007⟩ | Publiée le 30 janvier 2017
    Thèse

    A new family of highly active iridacyclic lr(lll) precatalysts has been discovered. Notably, these ionic iridacycles are very stable so that their handling under air whether in solution or as solid powder is possible. The relative simplicity of their molecular structures allows their preparation on gram scale through a very simple and convenient synthetic protocol. We identified important iridium-silane intermediates involved in the catalysis of various reactions, e.g. the 0-silylation of alcohols, the hydrosilylation of CO and CN functions, and the activation of the C(sp3)-F bond of fluorocarbons. Experimental and theoretical studies of these intermediates point towards a Lewis donor-acceptor structural formulation of the type [lr(lll)H]-->[SiR3]. These results constitute a significant contribution to the design of future multicompetent precatalysts, and provide an original insight to the bonding within the Si-lr-H motif by considering the silylium ion [SiR3]+ as a Z-type ligand rather than a "traditional" X ligand.

  • Etudes in silico et expérimentale de la DXR & synthèse de D- et L-GAP énantiomériquement purs

    Fanny Krebs
    Autre. Université de Strasbourg, 2016. Français. ⟨NNT : 2016STRAF059⟩ | Publiée le 21 décembre 2016
    Thèse

    La thèse porte sur l’étude des 2 premières enzymes de la voie du MEP: la DXS et DXR. La voie du MEP conduit à la biosynthèse des isoprénoïdes chez la plupart des bactéries, dont des pathogènes. Etant absente chez l’homme, les enzymes de cette voie cible idéale pour la recherche de nouveaux antimicrobiens. L’objectif principal était d’améliorer le développement de nouveaux antimicrobiens. Nous avons utilisé des outils computationnels : méthodes de docking et de mécanique moléculaire couplée à la méthode MM/PBSA. Nous avons identifié les résidus contribuant significativement à la fixation d’un ligand dans le site actif de la DXR. Ces résultats ont été utilisés lors de la conception de nouveaux candidats inhibiteurs de type bisubstrat, biligand et difluoro phosphonate, dont 2 ont pu être synthétisés. Nous avons également développé une méthode de synthèse donnant accès au L- et D-GAP énantiomeriquement purs, dans le but d’étudier l’énantiospécificité de la DXS face à son substrat D-GAP.

  • Utilisation de zéolithes dopées avec des métaux en synthèse organique

    Eric Wimmer
    Chimie organique. Université de Strasbourg, 2016. Français. ⟨NNT : 2016STRAF061⟩ | Publiée le 8 décembre 2016
    Thèse

    A l’heure actuelle, la réduction de l’impact environnemental de l’industrie chimique est un enjeu majeur. Pour parvenir à ce but, le concept de Chimie Verte, né dans les années 90, cherche à promouvoir les réactions catalysées et notamment l’utilisation de catalyseurs hétérogènes. L’objectif de cette thèse a été d’utiliser des zéolithes, aluminosilicates microporeux, dopées avec un métal, pour des applications en synthèse organique, et notamment dans une synthèse multi-étapes. Ce type de catalyseur hétérogène est intéressant car il est potentiellement recyclable, facile à séparer du milieu réactionnel et stable.Afin d’atteindre notre objectif, la synthèse totale de l’acortatarine A a été effectuée en utilisant lors d’une étape, une zéolithe dopée avec du cuivre pour former un N-alcynylpyrrole et lors d’une autre étape, une zéolithe dopée avec de l’argent pour effectuer une spirocétalisation. Dans un premier temps, les méthodologies liées à ces deux réactions ont été étudiées puis dans un second temps, en se basant sur les connaissances acquises, la synthèse totale de l’acortatarine A a été effectuée avec succès. Il est à noter que lors de cette synthèse, deux étapes additionnelles ont été réalisées avec des zéolithes acides. A travers cette synthèse nous avons montré que les zéolithes dopées avec des métaux qui entrent pleinement dans le cadre de la Chimie Verte, peuvent être des outils très attractifs dans les synthèses multi-étapes.

  • Synthesis and characterisation of zeolites, their application in catalysis and subsequent rationalisation : methanol-to-olefins (MTO) process with designed ZSM-5 zeolites

    Pit Losch
    Catalysis. Université de Strasbourg, 2016. English. ⟨NNT : 2016STRAF035⟩ | Publiée le 30 septembre 2016
    Thèse

    This work revolved around the synthesis, characterisation and application of zeolites in heterogeneous catalysis. In some cases, counterintuitive observations and results needed a thorough rationalisation, which allowed a truly continuous improvement, or rational design of a catalyst for a given reaction. Zeolites are crystalline and microporous aluminosilicates, which are defined and differ one from another through their 3D arrangement of tetrahedra (SiO4 and AlO4).It has been aimed to design heterogeneous catalysts for reactions that fit in the concepts of a sustainable chemistry. Thus, this works describes and tried to respect the concepts of green chemistry and carbon upgrading. Remarkably, during this thesis the feedback looped continuous improvement approach has led twice to adapted catalysts for a catalytic chemical transformation: the liquid-solid continuous flow halogenation of aromatics was best performed with nanosized H-*BEA zeolites exhibiting a hierarchical porosity. In contrast, the gas-solid Methanol-to-Olefins (MTO) process needed an unusual catalyst. Indeed based on our study, large and perfectly crystalline H-ZSM-5 crystals with a disperse Brønsted acidity were the optimum catalyst.

  • Fabrication de cages moléculaires organométalliques à partir de zwitterions organiques quinonoïdes

    Minghui Yuan
    Chimie de coordination. Université de Strasbourg; Université de Neuchâtel (Neuchâtel, Suisse). Faculté des sciences, 2016. Français. ⟨NNT : 2016STRAF064⟩ | Publiée le 28 septembre 2016
    Thèse

    Ce travail de thèse a permis d’obtenir une nouvelle famille de métalla-prismes hexaruthénium à partir des zwitterions quinonoïdes pour des applications biologiques. Les zwitterions quinonoïdes possèdent deux groupes fonctionnels, permettant ainsi l’ajout de fonctionnalités au système supramoléculaire afin de moduler leurs propriétés physiques et/ou chimiques, et améliorer l’activité biologique. Plusieurs métalla-prismes ont été testés sur différentes lignées de cellules cancéreuses. L’étude de la capacité d’encapsulation de ces métalla-prismes a été réalisée en utilisant des molécules polyaromatiques comme agent invité. Leur faculté à encapsuler une molécule et l’ouverture de la cage ont été étudiées par différentes méthodes d’analyses.

  • Resorcinarenic phosphines and iminophosphoranes for catalysis : formation of capsular complexes

    Thierry Chavagnan
    Other. Université de Strasbourg, 2016. English. ⟨NNT : 2016STRAF023⟩ | Publiée le 26 septembre 2016
    Thèse

    This thesis describes the synthesis of three types of phosphorus-containing resorcinarene cavitand: a) compounds with diphenylphosphino groups grafted to the wider rim of a generic cavity. These phosphines undergo facile, directed C–O bond breaking upon reaction with transition metal ions in the presence of exogenous or endogenous nucleophiles. A nickel complex of this type was shown suitable for the low pressure production of short α-olefins starting from ethylene; b) cavitands distally-substituted by two iminophosphoranyl groups (–Ph2P=NAr). One of them (Ar = p-anisyl), when combined with Rh(I), resulted in a shape-selective olefin hydrogenation catalyst; 3) double phosphino-cavitands, which upon chelation gave metallo-capsular complexes in which the metal centre is either fully or partially embedded in the resulting cavity. A platinum complex of this type resulted in the selective hydroformylation of styrene into the expected branched aldehyde.

  • Des nosylates à la synthèse totale de diènediynes

    Anna Dikova
    Chimie organique. Université de Strasbourg, 2016. Français. ⟨NNT : 2016STRAF036⟩ | Publiée le 23 septembre 2016
    Thèse

    La synthèse totale de la N1999-A2 représente un défi synthétique qui a intéressé plusieurs grandes équipes spécialisées dans ce domaine. L’approche synthétique envisagée repose sur le savoir-faire du laboratoire. Elle permet de former le cœur diènediyne dans les dernières étapes de la synthèse. Nous avons réussi à réaliser le premier couplage des deux synthons clefs, une avancée majeure dans le cadre de notre approche synthétique. Ce travail a aussi permis le développement de nouvelles méthodologies. Notamment les couplages croisés au palladium avec un nouveau type de partenaire électrophile stable : les nosylates d’aryle ou vinyle. Cette découverte permettra de compenser l’instabilité de plusieurs intermédiaires synthétiques clefs (triflates d’énol).

  • Caractérisation de substances naturelles en contexte archéologique : apport des études moléculaires, isotopiques et de la datation au 14C

    Blandine Courel
    Chimie analytique. Université de Strasbourg, 2016. Français. ⟨NNT : 2016STRAF026⟩ | Publiée le 7 septembre 2016
    Thèse

    Ces travaux d'archéométrie concernent l’étude moléculaire par GC-MS de marqueurs lipidiques (biomarqueurs) préservés au sein de sols archéologiques et de substances végétales impliquées en tant qu'ingrédients dans la confection d’artefacts. Des analyses complémentaires en isotopie du carbone de composés individuels et des mesures de datation au 14C (AMS MICADAS) de la matière organique totale des sols, d'extraits lipidiques et d'un composé individuel (miliacine) ont également été effectuées. Cette approche a permis:- de montrer l’existence de la culture de millet dès l’âge du Bronze en Alsace, les sols associés à cette culture et leur contenu organique ayant été piégés et préservés dans des silos à grains enterrés datés de l’âge du Fer.- d'identifier la nature de structures archéologiques comme étant d'anciennes latrines et une aire de stabulation de bétail via l'identification de stéroïdes fécaux.- d'établir des critères chimiotaxonomiques fiables basés sur l'analyse des lipides pour l’authentification de résines de styrax et de liquidambars.- d'identifier la nature d'une résine issue de Styrax officinalis ayant été incorporée dans l’enduit organique ornant un crâne décoré (IXème millénaire av. J.-C., site de Nahal Hemar, Israël).- de mettre en évidence l’emploi de brai de bouleau comme agent collant lors de la confection d’un bijou daté du Premier âge du Fer.

  • Les zéolithes comme catalyseurs "verts" pour la synthèse organique : de leur synthèse à façon à leurs applications en chimie organique

    Claire Bernardon
    Catalyse. Université de Strasbourg, 2016. Français. ⟨NNT : 2016STRAF017⟩ | Publiée le 8 juillet 2016
    Thèse

    Les zéolithes, aluminosilicates cristallins poreux, sont des catalyseurs acides hétérogènes très largement utilisés dans l’industrie chimique. Ces catalyseurs permettent de répondre très précisément à de nombreuses exigences économiques et environnementales contemporaines. Pour cela, les zéolithes s’appuient sur des propriétés uniques, comme la sélectivité de forme, ou encore la présence d’une double acidité de Lewis et de Brønsted, pour offrir de nouveaux outils à la synthèse organique. Ce sont plus de 230 structures qui ont été décrites à ce jour mais ce sont bien des centaines de milliers d’assemblages possibles, ce qui laisse un vaste choix quant à l’expansion de cette recherche. Dans ce travail, nous avons cherché à (i) mieux comprendre la cristallisation des zéolithes en présence d’un déchet issu de l’industrie sucrière, la bagasse de canne à sucre ; (ii) pour cela, différentes techniques ont été employées et développées afin de permettre une caractérisation précise de chaque zéolithe, notamment leur acidité, paramètre clé de leur réactivité ; (iii) une fois bien identifiés, ces catalyseurs ont été engagés dans des réactions modèles, une réaction de Diels-Alder ainsi qu’une acylation de Friedel-Crafts. Ainsi, un catalyseur le plus « idéal » possible regroupant toutes les propriétés requises aura pu être conçu sur mesure. Cette thèse s’essaie à une meilleure compréhension de la croissance cristalline des aluminosilicates poreux, et cela, via la synthèse de différentes zéolithes dont les propriétés intrinsèques sont optimisées puis utilisées de façon à obtenir les meilleurs résultats dans des réactions de catalyse acide ; en accord avec la chimie verte et ses préceptes.

  • Synthèse de prodrogues d'inhibiteurs de la 1-désoxy-D-xylulose 5-phosphate réductoisomérase (DXR) : des agents antituberculeux potentiels

    Mathilde Munier
    Autre. Université de Strasbourg, 2016. Français. ⟨NNT : 2016STRAF016⟩ | Publiée le 7 juillet 2016
    Thèse

    De nos jours la tuberculose est une des maladies les plus meurtrières au monde. Un problème majeur est que l’agent pathogène responsable de cette maladie (Mycobacterium tuberculosis) a développé des mécanismes de résistances envers les médicaments actuels. Il devient donc urgent de trouver d’autres cibles pour développer de nouveaux antituberculeux. La biosynthèse des isoprénoïdes pourrait en être une. Les précurseurs biologiques de tous les isoprénoïdes sont l’IPP et le DMAPP qui sont synthétisés selon deux voies. La voie du mévalonate, présente chez l’Homme et la voie du méthylérythritol phosphate (MEP) laquelle est présente chez M. tuberculosis et absente chez l’homme. La fosmidomycine et la fosfoxacine, deux inhibiteurs de la désoxyxylulose phosphate réductoisomérase (DXR), deuxième enzyme de la voie du MEP ne permet pas d’inhiber la croissance de la mycobactérie. Cela est dû à l’absence de pénétration de ces composés polaires au sein de la bactérie. Pour pallier à ces problèmes de biodisponibilité, nous avons synthétisé des prodrogues lipophiles de type cycloSaligényle et arylphosphoramidate d’inhibiteurs de la DXR. Certains composés sont inhibent la croissance d’une mycobactérie non-pathogène, Mycobacterium smegmatis.

  • Organometallic compounds of tin and ruthenium : applications in medicinal chemistry

    Ana Soraya Lima Barbosa
    Other. Université de Strasbourg; Universidade Federal de Alagoas, 2016. English. ⟨NNT : 2016STRAF029⟩ | Publiée le 29 avril 2016
    Thèse

    Related to antimicrobial research, we synthesized tin compounds derived from undecylenic, ricinoleic and caprylic acids and we found that they show very high activity against some strains of bacteria and yeast, even in nM range, being up to four thousand times more potent against Staphylococcus aureus than against mammalian cells. For ruthenium compounds, in turn, we have confirmed that the mode of action of some compounds that were synthesized recently is undoubtedly different from Cisplatin or other ruthenium compounds, because of their high stability toward substitution reactions. Finally, during the vectorization of compounds derived from Ru with Affitin we have gained important knowledge about a possible mechanism of action of this type of molecule: it could indeed be possible that these compounds which have a very reduced redox potential compared to corresponding compounds can cause polymerization of proteins by electron transfer.

  • Etude de l'effet de l'anisotropie magnétique sur la phase dynamique et sur la phase géométrique des bits quantiques de spins électroniques d'ions de métaux de transition Mn2+, Co2+, Fe3+ isolés et des complexes d'ions Fe3+ dans l'oxyde de zinc monocristallin

    Khalif Benzid
    Physique [physics]. Université de Strasbourg; Université Ferhat Abbas (Sétif, Algérie), 2016. Français. ⟨NNT : 2016STRAE009⟩ | Publiée le 24 février 2016
    Thèse

    Nous avons étudié, par RPE impulsionnelle, la cohérence quantique et des spins électroniques des ions de transition Mn2+, Co2+, Fe3+, et des complexes Fe3+/Cs+ et Fe3+/Na+, tous présents dans le ZnO monocristallin. Nous avons trouvé que l’anisotropie magnétique peut altérer la cohérence de la phase dynamique des qubits des spins électroniques. Nous avons mesuré une faible décohérence pour les spins d’ions Mn2+et Fe3+ dans ZnO, qui ont tous deux une faible anisotropie magnétique uniaxiale, tandis que les ions Co2+ isolés avec une très forte anisotropie magnétique uniaxiale, une décohérence rapide a été mis en évidence. Nous avons trouvé que les spins électroniques des complexes de type Fe3+/Cs+, ayant un tenseur d’anisotropie magnétique plus complexe que la simple anisotropie uniaxiale des ions Fe3+ isolés, possèdent presque le même temps de décohérence. Par la méthode des perturbations, nous avons mis en évidence théoriquement un terme supplémentaire à la phase habituelle de Berry, dû à l’anisotropie magnétique et qui existe dans tout système ayant un spin S>1/2.

  • Des alcynyl-cétones fonctionnalisées : vers la synthèse de squelettes carbonés originaux

    Clément Heinrich
    Autre. Université de Strasbourg, 2016. Français. ⟨NNT : 2016STRAF001⟩ | Publiée le 29 janvier 2016
    Thèse

    Les travaux décrits dans ce mémoire de thèse ont pour objet d'une part l'étude de la réactivité de céto-3-alcynoates et de céto-sulfonylynamides. Les céto-3-alcynoates conduisent à la formation d'allénoates bi- ou tricycliques par catalyse au carbonate de césium. La sélectivité est totale au niveau de l'allénoate bicyclique obtenu. Il est également possible d'effectuer cette réaction de cyclisation de façon monotope au départ de l'alcynyl-cétone correspondante, dans ce cas les allénoates tricycliques sont obtenus avec de très bons rendements. Les 3-alcynoates peuvent également être utilisés pour la synthèse de dérivés oxydés de l'acide jasmonique. Ainsi deux composés énantiomériquement enrichis, le (-)-12-COOH-JA et le (-)-12-COOH-JA-Ile, observés dans les plantes blessées on été synthétisés. Ces composés ont permis d'élucider deux voies cataboliques : une voie oxydative et une voie hydrolytique. L'étude de la réactivité de céto-sulfonylynamides en présence de triflimide d'argent a conduit à l'obtention d'aza-bicyclo[n.m.1]alcanones. Cette réaction de Conia-ène formelle s'applique à différentes cycloalcanones, ainsi qu’à une grande variété d’ynamides fonctionnalisés

  • Radicaux π-conjugués pour la construction et le contrôle redox d'assemblages moléculaires

    Mathilde Berville
    Chimie organique. Université de Strasbourg, 2015. Français. ⟨NNT : 2015STRAF050⟩ | Publiée le 17 novembre 2015
    Thèse

    La conduction dans les matériaux organiques est un défi fondamental relevé par de nombreux chercheurs pour adapter au mieux la structure des matériaux à leur application. Les radicaux pi-conjugués sont les plus petites entités pouvant être le support d’une charge délocalisée. Ce travail s’inscrit dans le domaine de la synthèse de composés électro-actifs conduisant à des radicaux pi-conjugués pour l’auto-assemblage et le contrôle redox des propriétés de matériaux. Le chapitre 1 introduit les interactions spécifiques aux radicaux pi-conjugués et les propriétés physicochimiques liées aux édifices construits sur ces interactions. L’utilisation de ces interactions est ensuite illustrée par différents exemples choisis de la littérature. Le chapitre 2 porte sur la synthèse de dérivés de viologènes et la formation d’auto-assemblage en solution. Le chapitre 3 concerne le développement de synthèses de bis-viologènes cycliques suivi de l’étude de leur structure à l’état cristallin et en solution.

  • Structural characterisation of highly specific membrane protein-lipid interactions involved in cellular function

    Patricia Kemayo Koumkoua
    Biochemistry, Molecular Biology. Université de Strasbourg, 2015. English. ⟨NNT : 2015STRAF055⟩ | Publiée le 30 septembre 2015
    Thèse

    Cell membranes are complex systems composed of variety of lipids that interacts with proteins to trigger cellular function. The delivery of these lipids to the right compartment is crucial for cells to work efficiently. The coat protein (COP) complex vesicles are involved in lipids traffic in the early stages of the secretory pathway. Recently, a highly specific interaction has been found between the transmembrane domain of p24 protein (p24TMD) abundant in COPI membrane and sphingomyelin C18:0. As such highly specific interaction have been reported for protein-protein and protein-nucleic acid interactions to be involved in regulation of cell functions, we decide to investigate this specific interaction. The p24TMD was obtained chemically and investigated by solid state NMR in presence of sphingomyelin with the ultimately goal to understand the function behind.

  • Dynamics of ultrafast processes in excited states of organic and inorganic compounds

    Julien Eng
    Theoretical and/or physical chemistry. Université de Strasbourg, 2015. English. ⟨NNT : 2015STRAF044⟩ | Publiée le 25 septembre 2015
    Thèse

    This thesis can be divided in two parts.In the first one, we have studied the photoisomerization process in several systems. An electronic structure analysis mixed with a preliminary semi-classical dynamics investigation has been applied to a minimal model of the retinal chromophore in order to select the most important degrees of freedom involved in the process. The goal of this is to build diabatic potential energy surfaces in order to conduct quantum dynamics simulations. A semi-classical approach has also been applied to a molecular motor model to study the origin of the unidirectionality of its rotary motion. Finally, an electronic structure of a rhenium complex with a retinal-like ligand has been performed to study the effect of the coordination to a metallic atom on the spectroscopy of the retinal ligand. In the second part, we have investigated the intersystem crossings in a rhenium complex. In order to bring an explanation to an experimentally observed conterintuitive behavior of this complex, we have developed a model Hamiltonian that includes both interstate vibronic coupling and spin-orbit coupling. This Hamiltonian has been tested on the said complex and, in complement to an electronic structure study, allowed us to formulate a decay mechanism different from the one proposed based on experiments.

  • Synthesis and reactivity of metal complexes containing functionalized N-heterocyclic carbene ligands for catalytic applications

    Pengfei Ai
    Catalysis. Université de Strasbourg, 2015. English. ⟨NNT : 2015STRAF025⟩ | Publiée le 24 septembre 2015
    Thèse

    The purpose of this work was the synthesis of N,N'-diphosphanyl-functionalized NHC ligands andtheir coordination chemistry. The novel stable and rigid tridentate N,N'-diphosphanyl-imidazol-2-ylidene was synthesized and experimental and computational information on its stability weregained. It served as a unique platform for the synthesis of novel mono-, di-, tri-, penta-, hexanuclear complexes with the coinage metals (Cu, Ag and Au), exhibiting rare structural features. The mono- and dinuclear complexes with one or two dangling P-donors provided rational access to heterotrinuclear complexes. All these coinage metal complexes have short metal-metalseparations, indicating the presence of d10-d10 interactions, and display excellent luminescentproperties. Partial or complete transmetallation of the homotrinuclear Cu or Ag complexes withPd(0) precursors led to hetero-trinuclear complexes with d10-d10 interactions. In addition to itsbridging behavior, this ligand also showed its chelating behavior in Pd or Cr(III) complexes. Thelatter displayed superior performance in ethylene oligomerization than the Cr(II) complexes andgave mostly oligomers.

  • Transition metal complexes with N-heterocyclic carbene ligands : synthesis and reactivity

    Fan He
    Other. Université de Strasbourg, 2015. English. ⟨NNT : 2015STRAF031⟩ | Publiée le 23 septembre 2015
    Thèse

    The purpose of this work is the synthesis of complexes containing imine-functionalized protic NHC ligands in order to further develop synthetic methodologies giving access to pNHC, C-bound ‘anionic’ imidazolide, and homo- and heterodinuclear complexes. In the case of imidazoles without functional group, deprotonation with n-butyl lithium afforded (1-aryl-1H-imidazol-2-yl)lithium in good yield. Reaction of (1-aryl-1H-imidazol-2-yl)lithium with [Ir(cod)(μ-Cl)]2 or [Rh(cod)(μ-Cl)]2 yielded a doubly C2,N3-bridged dinuclear complex. In the case of imine-functionalized imidazole, the Ir(I) N-bound imidazole complex can tautomerize to Ir(I) imine-functionalized pNHC complex chloride abstraction at room temperature, while in the Rh(I) analog the tautomerization can be achieved at 110 °C. In situ deprotonation of the N-bound imidazole Ir(I) or Rh(I) complexes, followed by addition of [Ir(cod)(μ-Cl)]2 or [Rh(cod)(μ-Cl)]2 led to the isolation of homo- and heterodinuclear complexes. The metalation of imine-functionalized imidazolium salts is also an effective procedure for synthesis of pNHC metal complexes, and it was extended from bidentate to pincer-type pNHC complexes.

  • Polyoxometalate - porphyrin hybrids systems : application for the photocurrent generation and the photocatalysis

    Zhaohui Huo
    Other. Université de Strasbourg, 2015. English. ⟨NNT : 2015STRAF032⟩ | Publiée le 22 septembre 2015
    Thèse

    Polyoxometalates-porphyrin hybrid films were synthesized based on covalent or electrostatic interactions. Copolymeric polyoxometalate–porphyrin films were obtained by the electro-oxidation of zinc octaethylporphyrin (ZnOEP) or 5,15-ditolyl porphyrin (H2T2P) in the presence of a different type of polyoxometalates (POMs) bearing two pyridyl groups (py-POM-py). Three type of py-POM-py have been used: i) a tris-alkoxo functionalized Lindqvist polyoxovanadate, ii) an organosilyl functionalized Keggin-type [PW11Si2O40C26H16N2]3- and Dawson-type [P2W17Si2O62C26H16N2]6-, and iii) a bis-pyridine-substituted organo-polyoxometallic bricks using [P2W15V3O62]9− diolamide-grafting method with various geometries of the pendant group. All are applied for photocurrent generation and photocatalytical recovery of metals (Ag and Pt). Electrostatic POM-porphyrin films were also prepared by incorporated Preyssler type polyanion [NaP5W30O110]14- onto the electropolymerized polycationic porphyrin (poly-ZnOEP) with viologen or bis-viologen as spacers. [NaP5W30O110]14- as an efficient electron shuttle between the excited ZnOEP and viologen (or bis-viologen) which effectively retarded the fast charge pair recombination and enhanced the photocurrent magnitude. Later, we introduced nanoparticles POM@MNPs to a bis-porphyrin copolymer through metathesis reaction to further improve the efficiency of the photocurrent generation in which the localized surface plasmon resonance that occurs at the surface of silver nanoparticles has substantially enhanced the electronic excitation of surface-anchored porphyrin.

  • Catalyse à l'or (I/III) : de la réactivité au catalyseur, en passant par l'analyse structurale

    Marie Hoffmann
    Autre. Université de Strasbourg, 2015. Français. ⟨NNT : 2015STRAF020⟩ | Publiée le 26 juin 2015
    Thèse

    La catalyse organométallique est l’un des outils les plus puissants de la synthèse chimique, car elle permet de réaliser des transformations sélectives et spécifiques selon le catalyseur employé. Dans ce contexte, les sels et complexes d’or ont émergé il y a une quinzaine d’années et se sont révélés très utiles et attractifs pour la synthèse organique, faisant preuve de propriétés particulières de type acide de Lewis à la fois π (alcyno- alcènophilie) et σ (oxo- azaphile). L’objectif initial de cette thèse a été d'approfondir l’étude de la réactivité de l’or au travers la mise au point de nouvelles réactions catalysées par l’or(I/III). Si la majorité des réactions développées en catalyse à l’or concerne des processus de type π, nous avons dans un premier temps, souhaité évaluer son potentiel dans une réaction qui repose sur une activation purement σ, la cyclisation de Nazarov. Cette réaction a ensuite été étendue à un processus de type cascade, combinant activations π et σ. De plus, la formation d’un sous-produit inattendu au cours de cette étude a orienté nos recherches vers un nouveau processus catalytique, le réarrangement de γ–acyloxy alcynylcétones en furanes. Par la suite, nous nous sommes aussi intéressés au potentiel de l’or dans les réactions asymétriques, ce qui a conduit au développement d’un nouveau type de complexes d’or chiraux basés sur des ligands de type NHC-oxazoline. Enfin, nous nous sommes proposés d’utiliser la spectroscopie RMN J-résolue hétéronucléaire (une méthode simple mais peu exploitée), pour répondre à des problèmes d’attribution structurale.

  • Design, synthèse et application de nouveaux catalyseurs d'or (I) et d'or (III)

    Damien Hueber
    Autre. Université de Strasbourg, 2015. Français. ⟨NNT : 2015STRAF015⟩ | Publiée le 20 mai 2015
    Thèse

    En synthèse organique, la recherche de nouveaux catalyseurs est un point crucial pour améliorer les conditions réactionnelles et découvrir de nouvelles réactions, particulièrement en chimie de l’or. Pour contribuer à ce développement, nous nous sommes intéressés à la nature du contre-ion, dont dépend la réactivité du catalyseur d’or, avec les polyoxométallates. Ces polyanions, de par leur nature intrinsèque, ont permis d’obtenir de nouveaux catalyseurs efficaces, polyvalents, multi-fonctionnels et hétérogènes, et applicables à un grand nombre de réactions catalysées à l’or.Nous avons aussi étudié un autre paramètre essentiel de la composition d’un catalyseur d’or : le ligand. Notre intérêt s’est porté sur les ligands carbènes N-hétérocycliques (NHC), dont la modularité de leurs propriétés électronique et stérique confère à l’or d’importantes activités. Nous avons ainsi développé différents types de NHC, en les fonctionnalisant pour les rendre acteurs de la réactivité, ou encore en leur attribuant de nouveaux groupements très encombrant pour influencer la réactivité et la sélectivité.

  • Coordination chemistry of N-heterocyclic carbenes substituted by alkylfluorényl groups : weak interactions, steric effets, catalysis

    Matthieu Teci
    Other. Université de Strasbourg, 2015. English. ⟨NNT : 2015STRAF010⟩ | Publiée le 17 avril 2015
    Thèse

    This thesis deals with a series of N-heterocyclic carbene ligands (NHCs) in which the N atoms bear expanded alkylfluorenyl (AF) substituents. Special focus has been put on the steric properties of these new ligands, as well as their influence on catalytic reactions involving Pd and Cu centres.The first part of this work describes the synthesis of a series of AF-substituted azolium salts suitable for the preparation of palladium PEPPSI-NHC complexes. These turned out to be very active in Suzuki-Miyaura cross-coupling reactions between para-substituted aryl chlorides and arylboronic acids. Structural and NMR studies revealed that in all the complexes, the NHC ligand displays a "bimodal pincer" type behaviour, that is functions as a tridentate ligand bound to the metal through both covalent and non covalent bonds, the former involving the carbenic C atom, the latter CH atoms of the wingtips.In the second part of the study, a series of linear [AuCl(NHC)] and [CuCl(NHC)] complexes were prepared. In some of them were observed weak CH•••M interactions involving the alkyl chains fixing the metal centre in a position below the NHC ring plane. This leads to an unusual coordination of the ligand able to freeze out the movement of the metal centre during its natural oscillation about the M-carbene axis.In the last part of this thesis, one of the [CuCl(NHC)] complexes synthesised was shown to be highly efficient in the catalytic hydrosilylation of functionalised/sterically crowded aldehydes and ketones (TONs up to 1000). Its high stability was attributed to the variable encumbrance of the ligand.

  • Caractérisation moléculaire et isotopique de goudrons et résines archéologiques dérivés de conifères en contexte maritime

    Lucile Bailly
    Autre. Université de Strasbourg, 2015. Français. ⟨NNT : 2015STRAF013⟩ | Publiée le 8 avril 2015
    Thèse

    De tous temps, les Pinacées ont été utilisés pour leur résine ou le goudron que l’on peut en tirer, principalement dans le domaine maritime (calfatage, protection des cordages) et pour le poissage d’amphores. Ces travaux ont été consacrés au développement de nouveaux outils moléculaires et isotopiques pour la caractérisation de tels matériaux trouvés en contexte archéologique (distinction goudron / résine, origine taxonomique et géographique, modes de fabrication). Sur la base des outils développés, il apparait que l’utilisation de goudron prévaut dans ce contexte sur celle de résine et que les Pinus, dont les espèces peuvent être partiellement discriminées, sont les principaux Pinacées utilisés. Il a aussi pu être montré que les matériaux de calfatage et d’enduits de cordages sont globalement issus d’une cuisson moins poussée que ceux utilisés dans le poissage de récipients. Une distinction des échantillons archéologiques sur la base de leur composition isotopique en D a été proposée.

  • Etude in situ par RMN HRMAS sur des épidermes reconstruits du métabolisme et de la réactivité de xénobiotiques allergisants

    Éric Moss
    Autre. Université de Strasbourg, 2015. Français. ⟨NNT : 2015STRAF003⟩ | Publiée le 16 janvier 2015
    Thèse

    L’allergie de contact est une pathologie de la peau particulièrement répandue dans les pays industrialisés. Aucune thérapie ne permet actuellement de la soigner et seule l’éviction de l’allergène permet de la prévenir. Historiquement, l’évaluation du potentiel sensibilisant des molécules mises sur le marché a toujours été réalisée au moyen de tests sur l’animal. Cependant, le champ d’action de ces tests est aujourd’hui limité en raison de la nouvelle législation européenne sur les cosmétiques. Dans ce contexte, le développement de méthodes alternatives ne reposant pas sur l’utilisation d’animaux devient capital. L’allergie de contact repose sur une étape chimique clé : la formation d’un complexe antigénique allergène-protéine capable d’activer le système immunitaire cutané. Le but de ce travail de thèse a été d’étudier le comportement in situ d’allergènes au sein d’épidermes reconstruits de type SkinEthic®. A l’aide d’une technique d’analyse non invasive, la spectroscopie RMN HRMAS, il a été possible de suivre le devenir de différents allergènes, de leur éventuelle activation par voie métabolique, jusqu’à leur fixation sur les protéines épidermiques.

  • Tailor-made conception of zeolites for catalysis : from the active site to the reactor

    Marilyne Boltz
    Catalysis. Université de Strasbourg, 2014. English. ⟨NNT : 2014STRAF039⟩ | Publiée le 17 octobre 2014
    Thèse

    Zeolites are aluminosilicate catalysts of great importance for the chemical industries. Their unique properties, i.e., strong Brønsted acidity, high surface area, high hydrothermal stability, and shape selectivity, combined with an extensive tunability, render them the candidate of choice in various reactions. Nevertheless, often only a fraction of their potential is exploited, due to access and diffusion limitation to/in their micropores. In this field, the rational design appears as a valuable method to design new zeolite catalysts, according to their targeted application.The work described in this Thesis aims in the design of zeolites at three levels: (i) acid site by playing on the acid strength and on the accessibility, (ii) microscopic scale by adapting the crystal size and (iii) reactor level by coating zeolite crystals on different supports. These as-Prepared zeolites were evaluated in two acid-Catalyzed reactions: the aromatics chlorination and the conversion of methanol in light olefins (MTO).Hierarchical zeolites were synthesized according to several pre- or post-Synthetic modifications and evaluated in nitro- and chlorobenzene chlorinations. Besides, “giant” ZSM-5 zeolites, prepared according to fluoride-Mediated route, as well as zeolite coatings on β-SiC, were tested in the MTO reaction.Thanks to a direct correlation between catalytic activities and intrinsic properties, optimal catalyst properties were highlighted in both reactions.

  • Development and application of a selected configuration interaction method : from dispersive interactions to photo-induced magnetism in Prussian blue analogues

    Tim Krah
    Theoretical and/or physical chemistry. Université de Strasbourg, 2014. English. ⟨NNT : 2014STRAF035⟩ | Publiée le 24 septembre 2014
    Thèse

    In the first part, the electronic structure of two members of the family of Prussian Blue Analogues (PBA) has been inspected using wave function-based methods. The NiFe PBA exhibits a change of the magnetic coupling under a local structural deformation. Based on the results obtained for the CoFe PBA, a key role in the photomagnetic process observed in this material is attributed to the crystal vacancies. In a second part, a methodological development has been carried out and has lead to the implementation of the FRACCIS method (FRAgmented Contracted Configuration Interaction of Single excitations). It allows to concentrate the numerical effort on a small number of physically relevant determinants. Furthermore, it constitutes an analysis tool to measure the importance of certain excitations in the inspected system. The application to (H2)2 et C4H6 shows that a major reduction of the CI space is possible while keeping good accuracy with respect to reference values. This work contributes to the efforts towards a rational analysis of electronic correlation.

  • Experimental and theoretical study of non-covalent interactions in organometallic chemistry : the concept of hemichelation

    Christophe Werlé
    Other. Université de Strasbourg, 2014. English. ⟨NNT : 2014STRAF032⟩ | Publiée le 17 septembre 2014
    Thèse

    The present manuscript will present a rational method of synthesis, characterization, determination of the electronic structure and dynamic behaviour of solution-persistent, and formally unsaturated binuclear Cr(0)-M complexes (with M= Pd(II), Pt(II) or Rh(I)). This new class of complexes constitutes rare examples of persistent coordinatively unsaturated 14-electrons complexes, whose cohesion stems essentially from a compensation of insufficient donor/acceptor Cr-M bonding by non-covalent interactions of preponderant attractive Coulombic nature. By taking advantage of the ambiphilic character of a heteroditopic ligand capable of chelating a metal centre through covalent and noncovalent bonds, truly coordination-unsaturated complexes can be synthesized in a manageable form. We propose to name “Hemichelation” the half-covalent/half noncovalent bonding-relationship between the ambiphilic heteroditopic ligand and the electron-unsaturated metallic centre.

  • Confining cyclodextrins : synthesis, coordination properties and applications in asymmetric catalysis

    Matthieu Jouffroy
    Other. Université de Strasbourg, 2014. English. ⟨NNT : 2014STRAF024⟩ | Publiée le 12 septembre 2014
    Thèse

    This manuscript is concerned with the design of novel catalytic systems derived from metallocyclodextrins. The first part describes new ways of functionalising the cyclodextrin primary face regioselectively for accessing inherently chiral P,P’ chelators. These heterodentate ligands gavequantitatively cis-chelate complexes with various d8 cations. Their rhodium(I) complexes were assessed in the asymmetric hydrogenation and hydroformylation of prochiral olefins. Thecoordination and catalytic properties of two phosphines derived from a- and b-cyclodextrin are also reported. With their phosphorus lone pair pointing toward the CD core, these confining ligands force the coordinated metal centre to stay within the CD hollow and promote the formation of singly phosphorus-ligated complexes. Rhodium (I) monophosphine complexes of this type catalyse the asymmetric hydroformylation of styrene with both very high isoselectivity and enantioselectivity. Capping of diaminocyclodextrins with acenaphthenequinone resulted in the formation of a nonsymmetricN-(2-N’-alkylaminoacenaphthenyl)alkylimine handle with two intra-annular nitrogen atoms. A strong deformation of the cyclodextrin scaffold was shown to take place upon chemical or electrochemical oxidation of the bridging unit into the very short 1,2-disubstituted imidazole moiety.

  • Coordination of multidentate N-heterocyclic carbene ligands to nickel

    Valentine Charra
    Other. Université de Strasbourg, 2014. English. ⟨NNT : 2014STRAF019⟩ | Publiée le 5 septembre 2014
    Thèse

    The purpose of this work was the synthesis of bis-NHC (N-Heterocyclic carbene) ligands, theformation of the corresponding silver(I), copper(I) and nickel(II) complexes and the assessment ofthe catalytic activity of the bis-NHC nickel(II) complexes in ethylene oligomerization. A series of new bis-NHC silver(I) and copper(I) complexes was synthesized. Five different synthetic routes were tested for the formation of nickel(II) bis-NHC complexes. The most significant results were obtained by transmetalation from the silver(I) iodide or bromide complexes.

  • Biophysical investigation of the membrane and nucleic acids interactions of the transfection peptide LAH4-L1 : molecular mechanisms of complex formation and cellular entry

    Nataliia Voievoda
    Other. Université de Strasbourg; Universität Basel, 2014. English. ⟨NNT : 2014STRAF061⟩ | Publiée le 25 juin 2014
    Thèse

    Gene and RNA-based therapies have a great promise as the methods for the treatment of variety of the genetic disorders and viral infections, but also it is a versatile tool for the investigation of the genetic and epigenetic mechanisms underlying the proper functioning or dysfunctioning of the cells and complex organisms. However, intracellular delivery of nucleic acids remains a major hurdle for the implementation of these therapies. In spite of the recent progress in the field, there is limited number of the non-viral transfection agents that passed to the clinical phase of the drug development.An efficient transfection agent forms a complex (usually non-covalent) with nucleic acids, which is stable in the extracellular environment, in particular in the blood plasma. Furthermore, it should promote the cellular delivery by interacting with the plasma membrane or negatively charged glycosaminoglycans and inducing the endocytic uptake of the transfection complex. Finally transfection agent should enhance the endosomal escape and unpacking of the nucleic acids from the complex.Cationic amphipathic cell-penetrating peptide comprise all above-named features as they associate electrostatically with the nucleic acids, they bind efficiently and translocate plasma membrane promoting the cargo uptake. LAH4-L1 is the lysine and histidine-rich designed peptide from LAH4 family, possessing a promising DNA and siRNA transfection activity, which was shown in biological experiments on the cell culture. LAH4-L1 peptide displays different modes of interaction with the membranes at neutral and acidic pH, which is one of the most important features that assure an efficient nucleic acid release to the cytoplasm.This works is dedicated to the investigation of structural and thermodynamic characteristics of the LAH4-L1 association with model membranes and nucleic acids, such as generic DNA and siRNA. The variety of the biophysical techniques, as nuclear magnetic resonance, circular dichroism, isothermal titration calorimetry, dynamic light scattering and calcein efflux assay, were used to unravel the mechanism of efficient cellular transfection by LAH4-L1 peptide.

  • Applications of functionnal diphosphines quinonoid zwietterions to coordination chemistry and surface functionalization

    Alessio Ghisolfi
    Other. Université de Strasbourg, 2014. English. ⟨NNT : 2014STRAF016⟩ | Publiée le 20 juin 2014
    Thèse

    The aim of this thesis was to develop new families of polyfunctional ligands to study their coordination chemistry towards transition metals and, depending on the products formed, to investigate their physical (e.g. magnetic) and / or catalytic properties. The evaluation of their potential for the formation of new materials as well as for the functionalization of metal surfaces was also part of the objective of this thesis. Therefore, each ligand has been functionalized with groups suitable for the anchoring on metallic surfaces, such as zwitterionic or thioethers moieties.

  • Réactivité d'azacycles en catalyse à l'or

    Nicolas Kern
    Autre. Université de Strasbourg, 2014. Français. ⟨NNT : 2014STRAF012⟩ | Publiée le 13 juin 2014
    Thèse

    La catalyse organométallique est l'un des piliers de la synthèse chimique moderne. Elle permet notamment la formation rapide de liaisons carbone-carbone et carbone-hétéroatome, processus les plus importants pour la fabrication des milliers de composés nécessaires à la vie contemporaine. Elle répond également aux critères d'économie d'atomes et d'énergie, et de réduction des déchets, des risques et des coûts de mise en oeuvre d'une réaction chimique.Parmi les thématiques les plus récentes de la synthèse organique, la catalyse homogène à l'or s'est imposée en seulement quelques années comme un outil synthétique très puissant. Elle autorise la génération rapide de complexité moléculaire à partir de substrats simples par l'activation d'insaturations carbonées. Durant ces études, nous avons tenté de tirer profit du caractère carbophile des complexes d'or (1) et (Ill) mais aussi de leur affinité pour certaines fonctions polaires pour transformer des hétérocycles acétyléniques en composés hétéropolycycliques dans des réactions en cascade. La réactivité complémentaire des complexes d'argent (1) a également été exploitée, ces derniers présentant de surcroît une sélectivité remarquable pour la déprotection d'éthers de méthoxybenzyle.

  • The quantum dynamics of the diffusion of dissociatively adsorbed diatomic molecules

    Thiago Diamond Reis Firmino
    Other. Université de Strasbourg, 2014. English. ⟨NNT : 2014STRAF011⟩ | Publiée le 27 mai 2014
    Thèse

    The work carried out during this thesis focuses on the quantum dynamics of the diffusion of hydrogen atoms on a surface of palladium (111). The study of the 3D system allowed us to detail the infrared spectrum of H/Pd (111), showing the existence of different adsorption sites on which localized states exist that are strongly coupled (Fermi resonance). This phenomenon governs the diffusion of hydrogen atoms in an ultra-fast time scale (fs).The study of the (6D) H2/Pd(111) system has shown that the transitions observed are in fact transition bands between several quasi-degenerate adsorption states. The agreement between the calculated and measured values is significantly less good than that between the data calculated for the 3D system and the measured data. Does adsorbed hydrogen on palladium exist in the form of a weakly bound H2 molecule? This thesis has provided some answers to this question, which remains open, hovewer, to some extent.

  • Production des polypeptides issus des glycoprotéines d'enveloppe du VIH-1 pour des études biophysique et structurale par RMN et DC

    Omar Rifi
    Biophysique. Université de Strasbourg, 2014. Français. ⟨NNT : 2014STRAF026⟩ | Publiée le 31 janvier 2014
    Thèse

    Quelques régions stables ont été découvertes sur les gp d’env du VIH-1 contre lesquelles des patients produisent des anticorps neutralisants. Les épitopes les plus prometteurs se trouvent dans la MPER et sont probablement exposés durant la fusion. Alors que les peptides isolés à partir de cette région ne sont pas parvenus à induire une réaction immunogène neutralisante, des études antérieures suggèrent que la membrane lipidique joue un rôle dans la structuration des antigènes et dans la réponse immunogénique.C’est pourquoi nous étudions la structure de ces épitopes. Cela nécessite leur surexpression, leur purification et leur reconstitution dans des liposomes. Une étude de CD montre qu’ils pourraient changer de conformation, cela sera confirmé par RMN. En outre, leur immunogénicité sera vérifiée par vaccination des souris. En plus, nous trouvons que le cholestérol peut modifier l’orientation des peptides englobant le motif CRAC de la gp41.

  • Propriétés magnétiques de matériaux hybrides lamellaires incluant des phthalocyanines métallées : essais en vue d’un couplage entre le magnétisme et la conductivité

    Riadh Bourzami
    Autre. Université de Strasbourg, 2014. Français. ⟨NNT : 2014STRAE001⟩ | Publiée le 20 janvier 2014
    Thèse

    Les travaux décrits portent sur des matériaux hybrides organiques-inorganiques présentant des propriétés magnétiques, de formule générale Mx(OH)2x-ny(Xn-)y (avec M(II) = Co, Cu, Zn, X= phtalocyanines métallées tétrasulfonate, MPc). Deux objectifs distincts ont guidé cette thèse : coupler la conductivité de la MPc au magnétisme des plans, d'une part, et déterminer expérimentalement, d'autre part, les couplages entre plans de Co conduisant à la mise en ordre autour de 6 K. Des étapes préliminaires de synthèse originale ont été nécessaires concernant la LiPc tétrasulfonate et des HSL de Zn. Ni la synthèse de la LiPc tétrasulfonate, ni les essais de dopage des MPc n'ont été suffisamment concluant pour pouvoir bénéficier des conductivités des MPc dans l'hybride associé. Les mesures magnétiques réalisées par SQUID ont montré que les HSL à base de feuillets de Cu sont antiferromagnétique sans mise en ordre. Ceux dont les feuillets sont constitués de Co s'ordonnent ferrimagnétiquement autour de 6 K quelle que soit la nature de Pc insérée, prouvant qu'il n'y a pas d'échange magnétique entre les feuillets,et que seule l’ interaction dipolaire est responsable de la mise en ordre. La CuPc insérée a joué le rôle de sonde paramagnétique et a permis, grâce à des mesures par RPE en bande X et en bande Q, d'estimer la valeur du champ dipolaire à 30 mT. Ces études valident le modèle théorique proposé par M. Drillon et al. Des études ont été réalisées sur CoPc insérées. qui sont majoritairement muettes en RPE du fait de leur agrégation et ne constituent pas de bonnes sondes RPE. Les HSL MCoPc montrent un pouvoir de réduction de l'O2.

  • DNP/solid state NMR probehead for the investigation of oriented membranes

    Hiba Sarrouj
    Theoretical and/or physical chemistry. Université de Strasbourg, 2014. English. ⟨NNT : 2014STRAF005⟩ | Publiée le 9 janvier 2014
    Thèse

    Helical membrane proteins comprise one third of the expressed proteins encoded in a typical genome. Other membrane proteins are typically beta sheets. Their function varies from pore formation, signaling to antimicrobial activity. They are also capable of transporting large cargo such as proteins or nucleic acids across the cell membrane. Recently, peptides have emerged as promising tools in drug delivery. Membrane proteins can be synthesized chemically or expressed and isotopically labeled in bacteria, isolated, purified and reconstituted into fully hydrated lipid bilayers. The bilayer orientation is kept mechanically by putting them between glass plates. While interacting with these bilayers they exhibit a variety of configurations depending on the lipids composition and thickness. Solid-state Nuclear Magnetic Resonance (NMR) on oriented bilayers is one way to access the topology of peptides associated with phospholipid membranes. Oriented membrane protein are difficult to study with analytical techniques because of their poor solubility outside the lipid membrane, difficulty of expression in bacteria in big quantities, difficulty to crystallize, and they are too large for solution NMR study. The intensity of an NMR signal depends on several factors such as polarization P and magnetic field magnitude B0. One of the major drawbacks of NMR spectroscopy is low sensitivity. This is caused by the small magnetic moment of the nuclear spins which results in a modest Zeeman splitting of the nuclear spin energy levels and therefore in a limited Boltzmann Polarization. The aim of this project is to obtain a better signal from membrane proteins. Thus a Low temperature (LT) solid state NMR with Dynamic Nuclear Polarization (DNP) probe head was created. DNP is an ingenious technique that is used to transfer polarization from highly polarized targets to less polarized nuclei using microwave irradiation. Microwaves will excite selectively the electron spins which will transfer their polarization to the pool of proton nuclei, the proton NMR signal can be enhanced by 660 times. A probe head for DNP enhanced solid state NMR at 100 K and 9.4 T is described. A probe head includes the mechanical piece that holds the sample in the magnetic center of the NMR magnet. It is a tunable antenna that irradiates and detects the rf fields used in NMR. The centerpiece of the probe is the solenoidal or saddle coil surrounding the sample. The feasibility of such a DNP experiment is proven on magic angle oriented sample spinning. These experiments are conducted on oriented samples wrapped into a rotor. Through their orientation with regards to B0 is lost, enhancement values as high as 17 are obtained. [...]

  • Synthèse et caractérisation d'assemblages multi-porphyriniques à espaceurs NHC

    Julien Haumesser
    Autre. Université de Strasbourg, 2013. Français. ⟨NNT : 2013STRAF041⟩ | Publiée le 13 septembre 2013
    Thèse

    L'objectif de cette thèse a été de mettre au point l'introduction d'azoles en meso d'une porphyrine par couplage d'Ullmann; Divers azoles ont pu être introduit par cette méthode avec de bons rendements, par formation d'une liaison carbone-azote. il a même été possible avec certains azotes de réaliser des doubles couplages d'Ullmann, conduisant ainsi à des 5.15-diazolyle-porphyrines. De plus, ces même conditions réactionnelles ont été utilisées pour introduire un ou deux dérivés donneurs d'électrons (carbazole, phénoxazine, phénothiazine). L'introduction d'imidazole, de triazole et de benzimidazole en meso a permis, après alkylation, d'obtenir des précurseurs de carbènes N-hétérocycles (NHC). La coordination de deux équivalents de NHC sur un sel de palladium conduit à un dimère de porphyrines via coordination exocyclique. La géométrie de coordination trans-anti autour du palladium a été confirmée par l'obtention de la structure radiocristallographique de deux complexes. Les études par électrochimie de ces complexes ont révélé une communication interporphyrinique à l'état fondamental, mise en évidence par une succession de quatre vagues monoélectroniques en oxydation.

  • Synthesis, characterization and photochemical properties of 3d transition metal supported by aroyl-hydrazone ligands

    Khaled Cheaib
    Other. Université de Strasbourg, 2013. English. ⟨NNT : 2013STRAF062⟩ | Publiée le 5 septembre 2013
    Thèse

    This PhD thesis explored some aspects of the coordination chemistry of molecular complexes based on 3d transition metal ions (Fe, Cu, Mn and Ni) coordinated by multidentate aroyl-hydrazone ligands. The work of this thesis was particularly focused on the development of new ligands, their coordination chemistry and the photochemistry of ferric complexes. The central objective of this work was to elucidate the mechanism of the photo reduction process, in order to valorize an already accepted laboratory patent on the production and storage of solar energy. The complexes involved in the process have been fully characterized in solution and in the solid state. This phenomenon takes place in solution as in frozen solution. The kinetics of the photochemical process was followed by UV-Visible as by RPE. This photo reduction passes through a radical intermediate and the solvent plays the role of the electron donor. This process has been fully studied: the effect of the solvent, the effect of the modification in the coordination sphere of the complex, the effect of the modification of the periphery of the ligands and finally the effect of the light and different wavelengths. Other fields are also explored, such as molecular magnetism for different mono and dinuclear iron and manganese complexes or even homogeneous catalysis (oligomerization of ethylene) with complexes based on Ni(II).

  • Etude quantique des liaisons fortes et faibles : développement de fonctionnelles "doubles-hybrides" et de surfaces de potentiel analytiques

    Yann Cornaton
    Autre. Université de Strasbourg, 2013. Français. ⟨NNT : 2013STRAF027⟩ | Publiée le 3 septembre 2013
    Thèse

    Les travaux réalisés au cours de cette thèse se décomposent en deux thèmes principaux, eux-même subdivisés enplusieurs projets. D'une part, des travaux ont été menés concernant l'analyse et le développement de fonctionnelles « doubles hybrides ». Une analyse des fonctionnelles « doubles hybrides » à séparation linéaire le long de la connexionadiabatique a été proposée. Une nouvelle fonctionnelle « double hybride » à séparation de portée basée sur uneséparation alternative de l'énergie d'échange et de corrélation, RSDHf, a été développée. D'autre part, des travaux quant au développement de surfaces d'énergie potentielle (SEP) analytiques ont été menés. Un nouveau potentiel analytique a été proposé pour la description de la SEP des systèmes triatomiques. La combinaison de ce potentiel avec un potentiel électrostatique a été utilisé pour le développement de SEP analytiques pour de petits systèmes en interaction faible : H2O···HF, HF2-, Ne···ClF.

  • Elaboration de bâtonnets et de grilles supramoléculaires : étude de leurs propriétés magnétiques

    Christophe Burg
    Autre. Université de Strasbourg, 2013. Français. ⟨NNT : 2013STRAE039⟩ | Publiée le 8 juillet 2013
    Thèse

    La synthèse supramoléculaire permet de dépasser le jeu du hasard dans les rencontres intermoléculaires en programmant l’assemblage des briques moléculaires selon des stratégies déterministes. De telle prédispositions architecturales sont d’un intérêt majeur en nanosciences pour l’obtention de nano-objets moléculaires et leur organisation à l'échelle nanométrique.On peut imaginer réaliser des dispositifs de taille nanométrique en dotant de propriétés particulières les synthons de ces assemblages. Le travail présenté dans cette thèse de doctorat illustre en intégralité cette démarche, de la synthèse à la caractérisation des propriétés magnétiques de baguettes dinucléaires et grilles tétranucléaires dont les sites métalliques sont paramagnétiques. Une étude approfondie des conditions d’obtention de ces objets a été effectuée en utilisant des méthodes de caractérisation physico-chimiques. L’étude de leurs propriétés magnétiques a été menée principalement par Résonance Paramagnétique Électronique pour étudier les complexes formés en solution. Les contraintes géométriques qui sont exploitées par la synthèse supramoléculaire présentent un intérêt pour l’obtention de propriétés magnétiques particulières.

  • Biosynthèse de triterpénoïdes bactériens : méthylation d'atomes de carbone saturés non activés

    Nader Mallouk
    Autre. Université de Strasbourg, 2013. Français. ⟨NNT : 2013STRAF022⟩ | Publiée le 3 juillet 2013
    Thèse

    Ce travail pluridisciplinaire de thèse présente un éclairage sur le mécanisme de méthylation enzymatique de triterpénoïdes de la famille du hopane. Au cours de ce travail, nous nous sommes intéressés à déterminer la stéréochimie de la réaction enzymatique de méthylation en C-2 du cycle A du hopane. Cette stéréochimie a été étudiée par vérification de la rétention ou non du deutérium provenant du (5R)- et du (5S)-(5-2H1)-1-désoxy-Dxylulose, incubés dans des cellules bactériennes produisant des triterpénoïdes méthylés en C-2. Après avoir effectué la synthèse des deux isotopomères (R) et (S) marqués audeutérium en C-5 du DX, nous les avons incorporés dans les triterpénoïdes méthylés en C-2 chez Bradyrhizobium japonicum. Nous avons pu montrer par analyse en RMN 13C de ces triterpénoïdes méthylés isolés que la méthylation en C-2 n’est pas totalement stéréosélective, mais majoritairement une substitution du proton pro (R) en C-2 par le groupement méthyle a eu lieu.

  • Spectroscopie électronique et couplage spin-orbite de composés organométalliques

    Houari Brahim
    Autre. Université de Strasbourg; Université Oran 1 (Algérie), 2013. Français. ⟨NNT : 2013STRAF056⟩ | Publiée le 17 juin 2013
    Thèse

    Les travaux théoriques réalisés dans le cadre de la thèse nous ont permis d’étudier en détail, sur la base de méthodes DFT, TD-DFT et ab initio les propriétés structurales, électroniques et spectroscopiques de deux classes de molécules, les composés carbonyles hydrures des métaux de transition de la 1re et 3me rangée (Mn, Re) et les complexes cyclométalants phenyl pyridine de l’iridium. L’accent a été mis plus particulièrement sur les effets de couplage spin-orbite sur les spectres d’absorption électronique de ces molécules. La quantification de ces effets a permis de montrer que seuls les spectres électroniques des complexes possédant un centre métallique de la 3me rangée des métaux de transition (Re, Ir) étaient modifiés par la correction spin-orbite en perturbation. Le caractère des états, MC ou MLCT, la proximité des états singulets et triplets sont les facteurs qui influencent fortement l’interaction spinorbite entre états excités. Un effet remarquable observé pour le complexe du rhenium est le décalage important du spectre d’absorption vers le rouge du à l’éclatement de l’état triplet le plus bas. Dans ce cas l’effet de couplage spinorbite doit être pris en compte pour obtenir un spectre plus proche de l’expérience. Un effet spin-orbite déjà observé sur d’autres systèmes est l’augmentation de de la densité d’états par éclatement des états triplets et la diminuation des force d’oscillateur qui se répartissent sur ces états pour aboutir à des spectres d’absorption électronique plus étendus et moins intenses. L’étude menée sur les complexes d’iridium pour lesquels les spectres expérimentaux sont particulièrement mal résolus, montre un accord remarquable entre ceux-ci est les spectres d’absorption théoriques TD-DFT. Cependant les effets de fonctionnelle peuvent jouer un rôle important sur la qualité des spectres. Pour ces molécules les calculs ab initio n’ont pu aboutir au-delà du niveau CASSCF. Les états excités sont très délocalisés dans ces molécules et il est difficile de décrire au même niveau d’approximation les différents types d’états MLCT, LLCT, MC, LMCT... Dans la plupart des cas les fonctionnelles B3LYP et PW91 donnent des résultats satisfaisants pour les complexes d’iridium. Les éclatements spin-orbite des états électroniques triplets peuvent être supérieurs à 1500 cm-1 dans les complexes possédant un centre métallique de la 3me rangée des métaux de transition.

  • Développement et validation du logiciel S4MPLE : application au docking moléculaire et à l'optimisation de fragments assistée par ordinateur dans le cadre du fragment-based drug design

    Laurent Hoffer
    Médecine humaine et pathologie. Université de Strasbourg, 2013. Français. ⟨NNT : 2013STRAF020⟩ | Publiée le 3 juin 2013
    Thèse

    Cette thèse a pour but de développer le pendant in silico des étapes clés du Fragment-Based Drug Design (FBDD), et ce dans le cadre plus général du développement de l'outil S4MPLE. Le FBDD génère des ligands drug-like à partir de petites molécules (fragments). Après une étape de validation de S4MPLE et de sa fonction d’énergie, un recentrage autour du FBDD est réalisé, à travers le docking puis l'optimisation virtuelle de fragments par growing ou linking (G/L). Cette stratégie reposesur 1) la création d’une chimiothèque focalisée en connectant un ou deux fragment(s) avec des linkers pré-générés, et 2) l’échantillonnage avec S4MPLE des composés chimères dans le site avec des contraintes. Des simulations de G/L plus ou moins ambitieuses (site flexible, ajout de H2O libres) permettent de valider cette approche avec des études rétrospectives basées sur des données expérimentales. La dernière phase de la thèse a consisté à appliquer ce protocole in silico à un projet de l’entreprise.

  • Toward green processes organic synthesis by catalysis with metal-doped solids

    Sophie Borghèse
    Other. Université de Strasbourg, 2013. English. ⟨NNT : 2013STRAF008⟩ | Publiée le 15 février 2013
    Thèse

    Nowadays, the modern chemical industry has to deal with increasing environmental concerns, including the disposal of waste and its economic impact, or the diminution of important worldwide resources such as transition metals. In this Ph.D. thesis, we aimed to bring improvement in this area by the development of green processes, based on the use of recyclable heterogeneous catalysts. By combining the catalytic properties of several metal cations with the properties of solid catalysts such as polyoxometalates or zeolites, we were able to set up new tools for organic synthesis. Silver-doped polyoxometalates proved to be very efficient catalysts in the rearrangement of alkynyloxiranes to furans. Acetals and spiroketals were synthetized by dihydroalkoxylation of alkynediols under catalysis with silver-zeolites. As a perspective, we highlighted the potential applications of such green procedures in the total synthesis of more complex molecules. The first results suggested that these environmental friendly processes should gain increasing interest in the future.

  • Relations structure-activité pour le métabolisme et la toxicité

    Christophe Muller
    Autre. Université de Strasbourg, 2013. Français. ⟨NNT : 2013STRAF004⟩ | Publiée le 24 janvier 2013
    Thèse

    Prédire à l’avance quels composés seront toxiques chez l’homme ou non représente un réel challenge dans le monde pharmaceutique. En effet, les mécanismes à l’origine de la toxicité ne sont pas toujours bien connus, et à cela s’ajoute le fait qu’un composé peut devenir néfaste seulement après qu’il ait été métabolisé. Nous proposons ici une approche originale utilisant les graphes condensés de réactions afin de modéliser les réactions métaboliques et prédire le devenir des xénobiotiques dans l’organisme humain. Différentes formes de toxicité sont aussi prédites : la mutagénicité et l’hépatotoxicité. Pour cette seconde toxicité, l’approche utilisée est la première à notre connaissance à prédire avec succès les molécules toxiques décrites par des données autres que résultant d’observations in vivo.

  • C35 bacterial triterpenoids of hopane series : biosynthesis of the C5 side chain

    Wenjun Liu
    Other. Université de Strasbourg, 2013. English. ⟨NNT : 2013STRAF001⟩ | Publiée le 22 janvier 2013
    Thèse

    C35 Bacteriohopanoids represent the majority of hopanoids produced by bacteria. They bear an additional C5 side chain linked by a carbon/carbon bond to the isopropyl group of the hopane skeleton. The C5 side chains present an impressive structural diversity and carry taxonomic and physiological information. The most common C35 bacteriohopanoids are bacteriohopanetetrol (BHT) and aminobacteriohopanetriol. Moreover, these two compounds are proposed as the parents of most complex bacteriohopanoids. Therefore, elucidation of the biosynthesis of hopanoid side chains is in great interest for a better understanding of the physiological distribution and biological importance of bacteriohopanoids.In this work, ribosylhopane was isolated for the first time from a bacterium. This discovery is a solid proof for the role of ribosylhopane as an intermediate in the biosynthesis of hopanoid side chain. In addition, two genes involved in the hopanoid production in Streptomyces coelicolor have been characterized. Adnosylhopane may be converted into ribosylhopane by a phosphorylase; and an aminotransferase is required for the formation of aminobacteriohopantriol from ribosylhopane. Moreover, we have developed a concise strategy for the hemisynthesis of adenosylhopane and a deuteriated isotopmer. The subsequent incorporation of the deuteriated adenosylhopane into BHT by a cell-free system in Methylobacterium organophilum proved that adenosylhopane is indeed a precursor of C35 bacteriohopanoids.

  • Reactivity of acetylenic ω-keto-esters towards transition metal complexes : synthesis of polycyclic motives of natural products

    Christian Schäfer
    Other. Université de Strasbourg, 2013. English. ⟨NNT : 2013STRAF006⟩ | Publiée le 21 janvier 2013
    Thèse

    In this work, the reactivity of acetylenic ω-ketoesters towards different metal complexes was investigated. When acetylenic ω-ketoesters are submitted to Ti(OiPr)4/iPrMgBr, the formation of fused bicyclic γ-hydroxy-α,β-unsaturated esters was observed. The products were obtained with absolute selectivity in regard to the ring junction formed (cis) and the configuration of the double bond (E) and could be transformed into the corresponding α,β-unsaturated lactones, substructures of various natural products. When ω-ketoalkynes are used in Ag(I)-catalyzed cycloisomerization reactions, the formation of spirocyclic compounds was observed. By taking advantage of the reaction intermediates of this reaction, it was possible to isolate the corresponding spirocyclic alkenyl iodides. Performing cycloisomerization reactions with acetylenic ω-ketoesters, spirocyclic α,β-unsaturated esters are formed. We could show that these products are valuable substrates for the formation of 6-5-5- and 6-6-5-fused tricyclic systems which represent the skeleton of a large group of natural products.

  • Quantum mechanical investigations of the dynamical and spectroscopic properties of compounds containing heavy elements : the CuNO case study

    Balasubramoniam Murali Krishna
    Cheminformatics. Université de Strasbourg, 2012. English. ⟨NNT : 2012STRAF054⟩ | Publiée le 20 décembre 2012
    Thèse

    This thesis aims at validating a theoretical protocol to develop global potential energy surfaces for use in the spectroscopy and dynamics of transition metal nitrosyl complexes. To get an insight into the homogeneous catalysis of NO with Cu and the chemical reaction dynamics, an accurate prediction of the nature of the interaction, as well as of the global potential energy surfaces (PES) is necessary in the gas phase. Experimental data are difficult to obtain, hence the importance of carrying out calculations of the lowest electronic states as accurate as possible to address the structure , spectroscopy and dynamics of this system. All ab initio calulations we report here were performed at the multi-reference configuration interaction (MRCI) and at the coupled cluster level of theory. We aslo investigate the importance of relativistic effects in the systems. For CuNO system, it is shown that a complete active space involving 18 valence electrons, 11 molecular orbitals and the prior determination of 12 roots in the MCSCF calculation is needed for overall qualitatively correct results from the MRCI calculations. The present calculations yield a bound singlet A' ground state for CuNO and comparared with previous results. We have obtained new, complete potential energy functions of the ground electronic states of CuO and CuN systems. Comparison of the term values for the lowest electronic states of CuO and CuN with those previously reported in the literature shows a quite good agreement. We derived a novel analytical representation of the adiabatic potential energy surface in the ground electronic state of the CuNO system as a sum of two-body and three-body terms. This compact and flexible representation enables us to make a physically correct interpolation of the ab initio data points at the MRCI level of theory. We use a modified Levenberg-Marquardt algorithm for fitting the potential, which has 19 adjustable parameters and which now enables us to do scattering dynamics of the CuNO system. We perform full dimensional quantum dynamical studies with this new potential. Convergence of the time dependent wavepacket calculation has been achieved. We find that the scattering in CuNO is highly inelastic. Intermediate, excited meta stable reaction products CuNO∗ live for about 0.5 to 1 ps and maybe more.

  • Synthèse et étude d'architectures porphyriniques auto-assemblées

    Vivien Rauch
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF046⟩ | Publiée le 23 novembre 2012
    Thèse

    L’objectif de ces travaux est la synthèse molécules destinées à la formation de fils moléculaires par auto-assemblage. La reconnaissance sélective d’un noyau imidazole par une porphyrine de zinc à anse phénanthroline est utilisée comme outil pour l’assemblage. Plusieurs variations structurales ont été apportées aux blocs d’assemblage de manière à explorer différentes possibilités de contrôle sur la formation des fils moléculaires. Sont présentés dans ce document, les synthèses des molécules, ainsi qu’une partie des études réalisées pour interpréter la nature des assemblages formés à la fois en solution, mais également sur des surfaces. La microscopie à force atomique a mis en évidence des espèces linéaires régulières auto-assemblées dont la formation est assistée par la surface.

  • Synthèse et réactivité de nouveaux complexes des métaux du groupe 13 portés par des ligands carbènes N-hétérocycliques

    Gilles Schnee
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF053⟩ | Publiée le 15 novembre 2012
    Thèse

    Au début de ces travaux, peu d’études avaient été faites sur la complexation des carbènes N-hétérocycliques avec des métaux oxophiles, électropositifs et à hauts degrés d’oxydation tel que les métaux du groupe 13. L’optimisation de voies de synthèse a permis d’étendre le nombre de complexes de types NHC-MIII (M = aluminium, gallium et indium), ainsi qu’à des complexes cationiques. L’association de ces précurseurs avec des NHCs plus encombrés a permis l’observation de réactivités sans précédent (complexes anormaux, paires de Lewis frustrées, dicarbènes N-hétérocycliques). Dans un second temps, la réactivité inhabituelle des ligands NHCs a permis l’isolation d’analogue au réactif de Tebbe, très actifs en méthylénation de dérivés carbonyles.

  • Synthèse de polyesters et polycarbonates : polymérisation en milieu homogène en vue d'une utilisation en milieu hétérogène permettant le recyclage de l'initiateur de polymérisation

    Frédéric Hild
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF037⟩ | Publiée le 8 novembre 2012
    Thèse

    Depuis une soixantaine d’années, les matières plastiques de types polyoléfines (par exemple le polystyrène, le polyéthylène, le polypropylène) ont connu un essor considérable, au point de devenir, avec près de 50 millions de tonnes produites en 2009 en Europe seulement (250 millions de tonnes dans le monde), les matériaux les plus utilisés actuellement. Les polyoléfines sont issues de ressources fossiles non renouvelables (d’origine pétrochimique), de plus en plus rares et chères. De plus, ces matériaux posent un problème environnemental, principalement en ce qui concerne leur élimination après utilisation (stockage dans des décharges, pollutions…). En conséquence, les polymères biodégradables et biocompatibles peuvent constituer une alternative viable aux plastiques d’origine pétrochimiques et sont déjà utilisés dans des domaines comme l’emballage, les outils biomédicaux ou les nanotechnologies. L’avantage de ces polymères est de limiter le recours aux énergies fossiles, puisqu’ils peuvent être issus de ressources renouvelables (blé, soja, maïs…). Le cycle de vie de ces produits implique une restitution des ressources prélevées via leur biodégradation et les analyses de ce cycle de vie tendent à montrer un impact moindre sur différents facteurs environnementaux (réchauffement climatique, acidification des pluies, nitrification des sols, émission d’ozone, etc.…) ainsi qu’une utilisation d’énergie et un rejet de CO2 inférieurs à ceux des matériaux habituellement utilisés. La faible part de marché de ces matériaux, quoiqu’en forte augmentation, est en partie dûe à leur coût, qui reste de cinq à dix fois supérieur à celui des plastiques traditionnels, ainsi qu’à leurs plus faibles propriétés de résistances thermique et mécanique. La problématique actuelle est donc de créer des matériaux bon marché aux propriétés physiques améliorées. Les polyesters et polycarbonates aliphatiques ont reçu une attention croissante ces dernières années. Les polyesters/polycarbonates biodégradables mentionnés précédemment peuvent être obtenus via différentes voies, mais la méthode de choix pour effectuer une polymérisation contrôlée (contrôle de la longueur de chaîne et de la tacticité du polymère) est la polymérisation par ouverture de cycle (ROP). Ce travail de thèse s’est donc focalisé sur la synthèse de complexes bien définis du groupe 13 pour leur application en tant qu' amorceurs de la ROP contrôlée d’esters et de carbonates cycliques.

  • Evolution of diamination : from intra- to intermolecular version

    Jonathan Kirsch
    Other. Université de Strasbourg, 2012. English. ⟨NNT : 2012STRAF038⟩ | Publiée le 20 octobre 2012
    Thèse

    We have first been interested in the 1,2-intermolecular diamination of allylic ethers and managed to develop a first version. This reaction employs catalytic amounts of palladium(II) compounds as catalyst source and proceeds with complete regio- and stereoselectivity. It represents a significant advance in oxidative 1,2-difunctionalization of alkenes. Then we have realized an optimization and simplification of the procedure allowing the diamination of allylic ethers through the use of only one equivalent of alkene and one oxidant. The reaction employs catalytic amounts of palladium(II) compounds as catalyst source and proceeds again with complete regioselectivity in mild conditions compatible with a large number of chemical functions. The scope of the reaction has been enlarged to aliphatic alkenes with moderate to good yields using the more acidic nitrogen source tetrafluorophthalimide. Finally, we have been interested in, and then realized, the first general intermolecular 1,4-diamination of dienes. The reaction employs economic reagents such as CuBr2 and saccharin and proceeds with complete regioselectivity under mild conditions. It represents this time a significant advance in oxidative 1,4-difunctionalization of dienes. Work in order to understand the underlying mechanisms as well as to develop further these reactions is ongoing.

  • Iridacycles à chiralité planaire : concepts, synthèses et applications

    Wissam Nabil Iali
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF020⟩ | Publiée le 16 octobre 2012
    Thèse

    L’un des axes de recherche du laboratoire Synthèse Métallo-Induites consiste en le développement de nouveaux complexes métallacycliques à chiralité planaire. Le défi majeur de cette thèse, a été l’élaboration de nouvelles approches sélectives de synthèse de complexes cationiques et neutres métallacyliques à chiralité planaire dont le métal chélaté est un centrestéréogène pseudo-tétraédrique.Le projet de thèse fut initié lors de l’étude d’une réaction inhabituelle de cycloruthénation d’un ligand dérivé de la 2-phénylpyridine qui était capable de produire un complexe ruthénacyclique OC-6 triscationique, homobinucléaire et à chiralité planaire comme produit secondaire en une seule étape à partir de substrats simples. Ce type de produit homobinucléaire ne peut se former uniquement que lorsqu’un groupement fortement donneur comme le N,N-diméthylamino (-NMe2) est présent sur le ligand départ. C’est donc à la lumière de ce résultat que nous avons engagé une étude systématique de la synthèse de nouveaux composés iridacycliques à chiralité planaire. Les fragments métalliques positivement chargés (Cp*Ir2+, Cp*Ru+) et neutre (Cr(CO)3) pourraient p-coordiner un fragment aryle riche en électrons d’un composé cyclométallé suivant un cours stéréochimiqueconditionné par la nature des entités ainsi introduites. Une des conséquences inattendues de ces recherches est l’émergence du concept de chiralité constitutionnelle déportée qui a surgi lors de l’étude du comportement conformationnel du complexe endo dicationique IrIr(NMe2) dont les groupes méthyles portés par le substituant N,N-diméthylamino dénotent une diastéréotopicité remarquable en spectroscopie de RMN 1H.A cette quête fondamentale de sélectivité s’est aussi greffée une exploration des propriétés catalytiques de nos complexes qui se sont révélés comme d’excellents précatalyseurs pour la promotion de réactions comme l’oxydation de l’eau et l’hydroamination/hydrosilylation d’alcynes vrais.

  • Modélisation des interactions faibles en théorie de la fonctionnelle de la densité

    David Sulzer
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF044⟩ | Publiée le 28 septembre 2012
    Thèse

    Les descriptions des interactions faibles et notamment de la dispersion représentent un problème majeur pour la théorie de la fonctionnelle de la densité. En effet, le caractère fortement local des fonctionnelles rend problématique la description des interactions à longue-portée. Aussi, plusieurs stratégies sont envisagées: des corrections des fonctionnelles existantes ou une introduction de méthodes post-Hartree-Fock par séparation de portée. Des résultats dans les deux cas sont exposés. Tout d'abord, la méthodologie hybride est appliquée à des dimères de métaux de transition (Cr2, Mn2 et Zn2). Ensuite, le calcul de coefficients de corrections pour la dispersion dans un cadre relativiste est présenté. Enfin, les interactions faibles peuvent également résulter de l'interaction d'une molécule avec un champ magnétique. Dans ce cadre, une modélisation de la modification de la densité électronique dans les systèmes aromatiques sous l'influence d'un champ magnétique extérieur est présentée.

  • Design, synthesis and characterization of new ligands and activators for the oligomerization of ethylene by iron complexes

    Adrien Boudier
    Other. Université de Strasbourg, 2012. English. ⟨NNT : 2012STRAF029⟩ | Publiée le 24 septembre 2012
    Thèse

    This thesis describes the development of new catalytic systems based upon iron complexes and their reactivity toward ethylene. First, we focused our interest on the synthesis of iron(III) precursors chelated by monoanionic ligand. Those complexes were obtained either by reaction of the monoanionic ligand with FeCl3 or through oxidation of the iron(II) complex. The second reaction led to binuclear complexes. Then, another aim of the thesis was to design new well-defined cocatalysts for the activation of iron complexes. The study of the reaction between an alcohol and the trimethylaluminum allowed us to reach this aim. Aluminum complexes adopted either a binuclear framework or a trinuclear one, depending on the nature of alcohol reagent. Besides this work, new iron(II) and nickel(II) complexes chelated by imino-imidazole ligands bearing a pendant donor function L were synthesized. All complexes have been evaluated for the oligomerization of ethylene in the presence of EtAlCl2 or MAO as cocatalyst. Only nickel complexes were active toward ethylene transformation.

  • Identification des intermédiaires de la réduction du dioxygène par la cytochrome c oxydase et ses modèles en faisant appel à la spectroscopie IR différentielle

    Nesrine Oueslati
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF027⟩ | Publiée le 6 juillet 2012
    Thèse

    La cytochrome c oxydase (CcO) est un complexe protéique commun à tous les organismes aérobies. Elle catalyse la réduction de l’oxygène en eau au niveau d’un site catalytique qui contient un atome de fer hémique et un atome de cuivre (CuB). La famille de ces oxydases est ainsi appelée super famille des oxydases à "hème-cuivre". Malgré le grand nombre d’études réalisées au sujet de l’activité catalytique des CcO, le déroulement exact des étapes de leur mécanisme reste encore mal connu. Afin de mieux cerner le problème de la relation structure-activité de cette hémoprotéine, deux approches distinctes et complémentaires ont été abordées : l’étude du système naturel et l’approche biomimétique. Les propriétés électroniques et vibrationnelles de certains intermédiaires du cycle catalytique de la cytochrome c oxydase ont été caractérisées par spectroscopies UV-Visible, de fluorescence résolue en temps et infrarouge. L’analyse du site actif de la CcO par des substitutions isotopiques du CuB, ainsi que l’influence du pH sur la structure de cet enzyme sont discutées. La deuxième partie de ce travail concerne l’étude du rôle de l’environnement proche de l’hème sur la réactivité des complexes FeII-CO et FeII-O2 grâce à une série de modèles superstructurés du centre binucléaire Fe/Cu de la CcO. Ces analogues synthétiques conservent l’hème, la ligation fer-histidine du site proximal et le ligand complexant le cuivre du site distal de la CcO, mais se différencient notamment par leur environnement autour de l’atome de cuivre et par leur rigidité. Deux techniques ont été utilisées: la spectroscopie ATR-IRTF et la photochimie dans le cas d’espèces carbonylées.

  • Synthèse de motifs "2-méthyl-1,3-aminoalcools" par réaction de type Reformatsky asymétrique : vers la synthèse totale du (+)-triènomycinol

    Marie Barbarotto
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF003⟩ | Publiée le 1 juin 2012
    Thèse

    Ce travail de thèse porte dans une première partie sur le développement d’une réaction de type Reformatsky asymétrique appliquée à la synthèse de motifs « 2-méthyl-1,3-aminoalcools » syn, syn et syn, anti. Cette réaction met à l’honneur la chimie des sulfoxydes chiraux dont la présence sur le substrat permet de construire trois centres asymétriques contigus. En effet, dans une première étape, une réaction de type Reformatsy entre un précurseur chiral, un γ-bromo-β-cétosulfoxyde et différentes imines permet de former les deux premiers centres asymétriques. La sélectivité favorise de composé syn. Cette réaction est très sélective avec des sélectivités syn/anti allant jusqu’à 100/0. Ensuite, une réduction diastéréosélective des β-cétosulfoxydes obtenus à l’issue de la réaction de Reformatsky permet de former le troisième centre asymétrique avec une diastéréosélectivité totale. Ainsi, l’utilisation du DIBAL-H seul permet d’obtenir l’aminoalcool 1,3-syn alors que l’utilisation du système DIBAL-H/Yb(OTf)3 permet d’accéder à l’aminoalcool 1,3-anti avec dans les deux cas une diastéréosélectivité totale pour cette étape de réduction.Dans une deuxième partie, ce travail de thèse présente des avancées vers la synthèse totale du (+)-triènomycinol, une molécule naturelle à forte activité cytotoxique. Il s’agit d’un macrolactame à 21 chaînons comportant une partie triènique, une liaison peptidique, une stéréotriade syn, anti et un centre asymétrique isolé. La stratégie proposée consiste à construire tous les centres asymétriques en utilisant la chimie des sulfoxydes chiraux. En effet, la stéréotriade a été construite en utilisant la réaction dévloppée dans la première partie, à savoir une réaction de type Reformatsky asymétrique couplée à une réduction diastéréosélective à l’aide du système DIBAL-H/Yb(OTf)3. Le centre stéréogène isolé a lui aussi été construit grâce à la chimie des sulfoxydes chiraux, par réduction diastéréosélective d’un β-cétosulfoxyde à l’aide de DIBAL-H. Cette molécule a été découpée en deux fragments, un fragments « ouest » et un fragment « est » qui ont été couplés. De nombreuses étapes ont au préalable été mises au point sur un composé modèle. Par manque de temps et de matière, la synthèse totale du (+)-triènomycinol n’a pu être achevée.

  • Vers la synthèse de cages porphyriniques à taille de cavité contrôlée par un stimulus externe.

    Julien Taesch
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF014⟩ | Publiée le 25 mai 2012
    Thèse

    Les cages moléculaires covalentes ou de coordination sont des molécules particulièrement intéressantes lorsqu’elles présentent une cavité active en reconnaissance moléculaire ou en réactivité chimique. Le projet consiste en la synthèse et l’étude d’un nouveau type de cage moléculaire, constituée de deux porphyrines reliées par des liaisons covalentes mais flexibles et de huit ligands 3-pyridyles (L) permettant de contrôler la taille de la cavité par un stimulus externe. L’étape-clé de la synthèse de cette cage est la formation d’un dimère de porphyrine par effet template, de sorte à favoriser la fermeture de la cage. Des cations métalliques coordinés par les groupements L ou un ligand ditopique comme le DABCO coordiné entre les métallo-porphyrines ont été utilisés pour pré-assembler le dimère. Ce dernier ayant été obtenu, les chaînes polyéther ont été reliées deux par deux par métathèse des oléfines. Une structure cristallographique de la cage covalente complexant le DABCO a pu être obtenue. La cage synthétisée a, par la suite, été démétallée et le DABCO retiré, la conformation adoptée par cette dernière molécule varie par rapport à son précurseur.

  • Multidisniplinary study of Alzheimer's disease-related peptides : from amyloid precursor protein (APP) to amyloid β-oligomers and γ-secretase modulators

    Anna Itkin
    Agricultural sciences. Université de Strasbourg; Université de Bruxelles, 2012. English. ⟨NNT : 2012STRAF051⟩ | Publiée le 14 mai 2012
    Thèse

    A histopathological characteristic of Alzheimer’s disease (AD) is the presence of amyloid plaques formed by amyloid β(A) peptides of 40 and 42 residues-long, which are the cleavage products of APP by proteases. To understand the role of structural changes in the TM domain of APP, APP_TM4K peptides were studied in the lipid bilayer using ATR-FTIR and ssNMR. While the overall secondary structure of the APP_TM4K peptide is helical, conformational and orientational heterogeneity was observed for the y- and for the -cleavage sites, which may have implications for the cleavage mechanism and therefore the production of Aβ. Starting from its monomeric form, Aβ peptides aggregate into fibrils and / or oligomers, the latter being the most neurotoxic. We found that in the presence of Ca2 +, Aβ (1-40) preferably forms oligomers, whereas in the absence of a2 + Aβ (1-40) aggregates into fibrils. In samples without Ca2 +, ATR-FTIR shows conversion from antiparallel β sheet conformation of oligomers into parallel β sheets, characteristic of fibrils. These results led us to conclude that Ca2 +stimulates the formation of oligomers of Aβ (1-40), that have been implicated in the pathogenesis of AD. Position and precise orientation of two new drugs  powerful modulators of γ-secretase  benzyl-carprofen and carprofen sulfonyl  in the lipid bilayer were obtained from neutron scattering and ssNMR experiments. These results indicate that carprofen-derivatives can directly interact with APP. Such interaction would interfere with proper APP-dimer formation, which is necessary for the sequential cleavage by β -secretase, diminishing or greatly reducing Aβ42 production.

  • Porphyrin-based [3]- and [4]rotaxanes : towards an adaptable molecular receptor

    Cécile Roche
    Other. Université de Strasbourg; University of Sydney, 2012. English. ⟨NNT : 2012STRAF011⟩ | Publiée le 20 avril 2012
    Thèse

    Rotaxanes and porphyrins are two particularly active fields of research in chemistry. However,molecules that combine the interesting properties of these types of structures are not so common. In this thesis we describe new porphyrin-based multi-rotaxanes, whose syntheses constitute interesting challenges.Porphyrins linked to two or four coordinating macrocycles were synthesised. The "gathering-andthreading" effect of copper(I) was used to thread molecular rods through the rings; the subsequent introduction of stoppers led to the formation of rotaxanes. In the case of the porphyrinic bis-macrocycle a [4]rotaxane was obtained. Host/guest complexation studies with rigid nitrogen ligands showed that the rotaxane behaves as a distensible molecular receptor that can adopt an "inflated" or "deflated" conformation and adjust its shape to the size of the guest. In the case of the porphyrinic tetra-macrocycle the formation of a [3]rotaxane of novel architecture was observed.The synthesis of a new, more rigid bis-macrocycle is in progress. This compound will be used for the construction of a [4]rotaxane that could act as a molecular press able to change the conformation of a guest substrate by compression.

  • Modélisation QSPR de mélanges binaires non-additifs : application au comportement azéotropique

    Ioana Oprisiu
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF059⟩ | Publiée le 28 mars 2012
    Thèse

    Généralement les modèles QSPR ne sont utilisés que pour prédire des propriétés des corps purs. Dans cette thèse nous avons développé une approche QSPR permettant de prédire des propriétés non additives de mélanges binaires, plus précisément leur caractère azéotropique/zéotropique. Pour parvenir à ce résultat, plusieurs types de modèles quantitatifs et qualitatifs ont été développés. L’approche est originale pour deux raisons. Premièrement, peu de travaux de recherche ont été publiés sur des mélanges dont les propriétés sont non-additives. Deuxièmement, plusieurs nouveaux aspects méthodologiques ont été introduits dans ce travail. Tout d'abord des descripteurs "spéciaux", capables de décrire des mélanges ont été proposés. De plus, un protocole robuste d'obtention et de validation des modèles a été utilisé, et un domaine d'applicabilité des modèles fiable a été proposé. La méthodologie développée pendant cette thèse démontre la fiabilité d'un nouveau concept – les modèles QSPR pour les mélanges. Elle est comparable à d'autres méthodes classiques, quoique n'utilisant qu'un faible nombre de données en comparaison.

  • Variations autour d'une porphyrine à anse phénanthroline : un site distal dynamique

    Pauline Vorburger
    Sciences agricoles. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF004⟩ | Publiée le 16 mars 2012
    Thèse

    L’objectif de ce travail est l’obtention de mimes efficaces d’hémoprotéines telles le cytochrome P450, la myoglobine ou la cytochrome c oxydase, grâce à des variations synthétiques autour d’une porphyrine à anse phénanthroline (Porphen). Un nouveau modèle de cytochrome c oxydase a plus particulièrement été analysé ici. Il est préparé par substitution des deux positions meso d’une Zn-Porphen. Des phénomènes dynamiques ont été observés et étudiés par RMN 1H, mettant en évidence la présence d’atropoisomères et la coordination-décoordination de la pyridine proximale sur le zinc. Le remplacement du zinc par du fer a ensuite permis l’étude de la coordination d’un sixième ligand exogène dans un site distal dynamique. L’évolution de la géométrie du complexe a été suivie par spectrophotométrie UV-Visible et RPE. En présence de ligands azotés de type midazoles, il se forme dans tous les cas des complexes [1 récepteur/ 1 substrat]. La forte affinité de notre modèle pour le dioxygène a été montrée à la fois par spectrophotométrie UV-Visible, RMN 1H et par résonance Raman. Que ce soit en UV-Visible ou en RMN, la réversibilité du dioxygène a été montré par son remplacement par du CO. La souplesse de cette nouvelle architecture a été mise en évidence, par l’observation d’une relative flexibilité lors des études par spectroscopie IR de la fixation de CO dans le site distal. Cette adaptabilité est également à l’origine d’un comportement assez surprenant en électrochimie, où la réduction du fer(III) et l’oxydation du cuivre(I) en présence de O2 sont facilitées. En électrocatalyse, la réduction de O2 par ce nouveau modèle de cytochrome c oxydase n’est pas facilitée en terme de potentiel, mais efficace quant à la contribution d’un mécanisme à 4 électrons.

  • Évaluation du pouvoir allergisant de mélanges complexes : étude de la réactivité de molécules sensibilisantes en mélanges envers des peptides nucléophiles

    Matthieu Lang
    Chimie organique. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF025⟩ | Publiée le 29 février 2012
    Thèse

    L’allergie de contact est une pathologie très répandue. Il n’existe cependant aucun traitement permettant de la soigner. L’éviction de l’allergène reste à ce jour reste le seul moyen de la prévenir. De nombreux tests visant à déterminer le pouvoir allergisant des molécules ont été développés. L’un de ces tests est le Direct Peptide Reactivity Assay (DPRA), une méthode chimique visant à mimer une étape clé du mécanisme immunitaire menant à l’allergie de contact : la formation d’un complexe antigénique par réaction entre l’allergène et une protéine cutanée. Dans le cadre de la législation actuelle sur les cosmétiques, il pourrait être intéressant d’adapter ce test aux mélanges complexes. Le but de ce travail de thèse a été d’étudier la réactivité de différents mélanges d’allergènes connus vis-à-vis des trois peptides utilisés dans le DPRA et de la comparer à celle de chaque composant seul.Trois types de mélanges ont étés étudiés. Un mélange d’isothiazolinones utilisées comme conservateurs, trois mélanges binaires de trois aldéhydes utilisés comme parfums et enfin un mélange des deux responsables majeurs de l’allergie à l’absolu de mousse de chêne, un extrait utilisé en parfumerie.

  • Synthesis, physicochemical and biological evaluation studies of ruthenium(II) and osmium(II) anticancer organometallic complexes

    Bastien Boff
    Other. Université de Strasbourg, 2012. English. ⟨NNT : 2012STRAF001⟩ | Publiée le 11 février 2012
    Thèse

    Since the clinical success of platinum drugs (cisplatin and its derivatives) as anticancer agent, medicinal inorganic chemistry has become a field of growing interest because it offers an alternative for the design of therapeutic agents that are not readily available to organic compounds. Although cisplatin is one of the most widely used drugs in chemotherapy, it is not effective for all types of cancer. Moreover, platinum drugs are the cause of disabling side effects (neurotoxicity, nephrotoxicity, weight loss, nausea…) and their applicability is limited by innate or induced resistance to platinum in a narrow range of tumours. Therefore, this clinical success has promoted the search for cytotoxic compounds with enhanced activities and more acceptable toxicity profiles. This has stimulated interest in complexes containing other heavy metals of the platinum group such as ruthenium because these compounds show lower toxicity than drugs based on platinum. Some ruthenium compounds have already shown promising anticancer activity and two RuIII complexes trans-[RuCl4-(DMSO)(Im)]ImH (NAMI-A and trans-[RuCl4(Ind)2]IndH (KP1019) recently enter in clinical phase for their respectively antimetastatic and cytotoxic properties.In the essential aim of increasing activity and reducing side effects of anticancer agents, the Laboratoire de Synthèses Métallo-Induites has developed for several years organometallic ruthenium compounds RDC (Ruthenium Derivative Compound) in which one of the ligand is strongly bound to the metal via a strong σ C-Ru bond and stabilized by an intramolecular N-Ru bond. This thesis presents the recent advances of the laboratory in this field and the development of a second generation RDC in which the cylometallating ligand is stabilized by two N-Ru bonds. Thus, several complexes pass the symbolic barrier of the nanomolar range for their IC50 indicating a critical improvement. At the same time, we decided to focus our studies on osmium heavier congener, not only to complete the RDC chemical library, but also to verify the impact of exchanging the metal. An extensive chemical library ODC (Osmium Derivative Compound) of forty cyclometalated osmium complexes was synthesized and evaluated in vitro. Biological studies on these ODCs showed that osmium is another metal that deserves attention for the development of new effective antitumour drugs. The measurements of physicochemical properties such as red-ox potential and lipophylicity (log(Po/w)) allowed us to tentatively correlate these parameters to the level of activity, thus approaching a possible Property-Activity Relationship (P.A.R.). More insight into the role of the red-ox potential will probably become clearer as we progress into the mechanism of action of these species.

  • Synthèse de Hoodigogénine A, aglycone de glycostéroïdes extraits de Hoodia gordonii : vers la synthèse des 14β-hydroxy androstanes et /ou des 14β-hydroxy prégnanes

    Blandine Ressault
    Autre. Université de Strasbourg, 2012. Français. ⟨NNT : 2012STRAF067⟩ | Publiée le 31 janvier 2012
    Thèse

    Les travaux décrits dans ce mémoire ont pour objet la synthèse d’un glycostéroïde appelé P57 isolé d'une plante succulente du nom de Hoodia gordonii présentant des propriétés anti-appétantes. La première partie de ce travail décrit la synthèse de la hoodigogénine A, aglycone du P57. La synthèse mise au point comprend comme étape clef une réaction de Norrish type I couplée à une réaction de Prins conduisant à l'introduction de la fonction hydroxyle en position 14β au départ de 12-oxo stéroïdes. L’étude réalisée a permis de montrer que la formation des diols 12β-14β ne dépendaient pas de la nature de la jonction des cycles A et B, mais de celle du substituant en position 20. Ainsi, il a été possible de réaliser la première synthèse de la hoodigogénine A en 13 étapes avec un rendement global de 3% au départ de la 3α-12α-diacétoxypregnanone mais également de trois analogues de la hoodigogénine A. La deuxième partie de ces travaux a porté sur la synthèse totale de 14β-hydroxy-androstanes. La méthodologie mise en oeuvre est basée sur une réaction tandem de Michael-aldol initiée par TiCl4 qui permet d'accéder efficacement à un dérivé bicyclique représentant les cycles C et D présents dans les stéroïdes. En généralisant cette réaction tandem, des dérivés de type diquinanes, hydrindanes et décalines ont pu être obtenus. La transformation d'un dérivé hydrindénone adéquatement fonctionnalisé en diène 1,3 suivie d'une réaction de Diels-Alder a permis la synthèse d'un premier dérivé tétracyclique 14β-hydroxylé. Deux autres dérivés tétracycliques ont également pu être préparés, au départ d’une hydrindiénone en combinant une réaction de Michael avec une annélation de type Robinson.

  • Large cavity cyclodextrin-based macrocyclic ligands : synthesis, coordination and catalytic properties

    Rafael Gramage-Doria
    Other. Université de Strasbourg, 2012. English. ⟨NNT : 2012STRAF007⟩ | Publiée le 3 janvier 2012
    Thèse

    Cyclodextrins (CDs) are cyclic oligosaccharides of various sizes containing several α-(1→4)-linked D-(+)- glucopyranose units. The commercially available ones comprise six, seven or eight glucose units, named respectively α-CD, β-CD and γ-CD. Their truncated cone-like and well-defined cavity are particularly attractive for the encapsulation of a variety of substrates. As such, they found numerous applications in many areas of chemistry. A recent development, from which the present work is inspired, consisted in covalently linking transition metals to CD cavities in order to perform and study catalytic reactions in a confined environment featuring steric repulsive or attractive noncovalent interactions with the substrate or/and the metal coordination sphere.The first part of this thesis focuses on reviewing transition metal-based cavitands, for which the first and second metal coordination spheres are controlled by their cavity-shaped ligand. The following chapters are concerned with the synthesis, coordination and catalytic properties of two new phosphane ligands built on a large β-CD scaffold. The first one, named WIDEPHOS, is a diphosphine having two phenylphosphinidene "PPh" units capping adjacent glucose units on a methylated β-CD. This ligand features two phosphorus lone pairs pointing to the cavity interior but not aligned. These geometrical features, combined with the large distance separating the two phosphorus atoms, promote the formation of "imperfect" trans-chelate complexes in which the metal centre swings about the ligand. This unprecedented molecular movement, christened "oschelation", allows each phosphorus atom to form an optimal bond in turn with the coordinated d8 and d10 transition metal ions. Further studies on WIDEPHOS proved that it is better suited for coordinating dinuclear fragments within the confinement of the large β-CD cavity. Severe steric constrains on the metal first sphere of coordination result in the formation of single μ-chlorido bridged dinuclear species. In this new type of square planar complexes, non-optimal orbital overlapping measured by the so-called tilt angle was also found to take place for one of the phosphorus atom together with an "oschelation" movement involving non identical donor atoms, namely a phosphorus and an oxygen atom. Static gold(I) dinuclear complexes displaying similar imperfect orbital overlapping for one of the phosphorus atom were also prepared.

Université de Strasbourg
Centre national de la recherche scientifique | CNRS
Fondation Jean-Marie Lehn